Spatial Dynamics of Receptor-Mediated Endocytic Trafficking in Budding Yeast Revealed by Using Fluorescent ␣-Factor Derivatives

Total Page:16

File Type:pdf, Size:1020Kb

Spatial Dynamics of Receptor-Mediated Endocytic Trafficking in Budding Yeast Revealed by Using Fluorescent ␣-Factor Derivatives Spatial dynamics of receptor-mediated endocytic trafficking in budding yeast revealed by using fluorescent ␣-factor derivatives Junko Y. Toshima*†, Jiro Toshima*†, Marko Kaksonen*, Adam C. Martin*, David S. King‡, and David G. Drubin*§ *Department of Molecular and Cell Biology, University of California, Berkeley, CA 94720-3202; and ‡Howard Hughes Medical Institute, University of California, Berkeley, CA 94720-3202 Communicated by Randy Schekman, University of California, Berkeley, CA, February 7, 2006 (received for review December 24, 2005) Much progress defining the order and timing of endocytic inter- expressed in cells at steady state (9). However, because Ste2-GFP nalization events has come as a result of real-time, live-cell fluo- is not introduced externally to cells and then tracked through the rescence microscopy. Although the availability of numerous endo- endocytic pathway over time, it is not possible to know the identity cytic mutants makes yeast an especially valuable organism for of compartments labeled by Ste2-GFP. This molecule is expected functional analysis of endocytic dynamics, a serious limitation has to label both endocytic and biosynthetic compartments, and po- been the lack of a fluorescent cargo for receptor-mediated endo- tentially nonphysiological compartments if the GFP tag causes cytosis. We have now synthesized biologically active fluorescent missorting of this integral membrane protein. mating-pheromone derivatives and demonstrated that receptor- mediated endocytosis in budding yeast occurs via the clathrin- and Results and Discussion actin-mediated endocytosis pathway. We found that endocytic For our synthesis of fluorescent ␣-factor derivatives, Alexa Fluor- proteins first assemble into patches on the plasma membrane, and 488 C5 or -594 C5 maleimide was conjugated to the ␧-amine of lysine ␣ then -factor associates with the patches. Internalization occurs 7of␣-factor, via thiopropionyl-Gly3 as a flexible, hydrophilic linker next, concomitant with actin assembly at patches. Additionally, (Fig. 1A). These labeled pheromones maintained biological activity, endocytic vesicles move toward early endosomes on actin cables. as assessed by induction of mating morphology in a cells, although Early endosomes also associate with actin cables, and they actively the activities were Ϸ25- to 50-fold less than for wild-type ␣-factor move toward endocytic sites to capture vesicles being released (see Fig. 6A, which is published as supporting information on the from the plasma membrane. Thus, endocytic vesicle formation and PNAS web site). Ste2p receptor-dependent binding and internal- capture of the newly released vesicles by early endosomes occur in ization of Alexa Fluor-594 (A594)-␣-factor indicated that A594-␣- a highly concerted manner, mediated by the actin cytoskeleton. factor is specifically internalized by receptor-mediated endocytosis (Fig. 1 B and C). When added to cells, A594-␣-factor (and actin ͉ cytoskeleton ͉ endocytosis ͉ endosome A488-␣-factor, data not shown) was first seen in internal endocytic compartments by 5 min (Fig. 1B; and see Movie 1, which is CELL BIOLOGY n recent years, live-cell imaging of endocytic events has proved published as supporting information on the PNAS web site). By 10 Iextremely powerful in yeast and other cell types for revealing min, A594-␣-factor began to concentrate in the vacuole and in mechanistic principles of endocytic internalization (1–7). In bud- bright structures that often were proximal to the vacuole. By 20 min, ding yeast, dynamics of at least two-dozen endocytic proteins have the ␣-factor was mostly in the vacuole (Fig. 1B; Movie 1). been analyzed by real-time analysis of GFP fusions, and effects of Recent studies showed that cortical actin patches are sites of numerous mutants on pathway dynamics have been quantitatively bulk-phase, clathrin-mediated endocytic internalization (2, 3, 5). analyzed. Although much is known about the dynamics and regu- Therefore, it is reasonable to ask whether receptor-mediated en- lation of the endocytic machinery as a result of these studies, a full docytosis of ␣-factor also occurs via these patches. To reveal the appreciation of the process depends on being able to analyze in real spatiotemporal relationships between cargo molecules and endo- time the transit of an endocytic cargo through the pathway. This cytic proteins, we tagged Abp1p, a marker for actin assembly at analysis is necessary so that functions such as cargo recruitment, endocytic sites, with monomeric red fluorescent protein (mRFP) concentration, internalization and trafficking can be attributed to and imaged the cells in real time as they endocytosed A488-␣- specific steps in the assembly and dynamics of the endocytic factor. Using total internal reflection fluorescence (TIRF) micros- machinery. copy, we observed A488-␣-factor as fluorescent spots moving An ideal cargo for such studies would be a fluorescent molecule diffusely on the cell surface (Fig. 1D Left; and see Movie 2, which that could be introduced to the cell externally, bound to cell-surface is published as supporting information on the PNAS web site). receptors, and then taken up by the endocytic machinery, such that Two-color analyses revealed that Abp1p (viewed by epifluores- the full history of the molecule would be known, and its fate could cence) joined preexisting A488-␣-factor spots (viewed by TIRF be followed as a function of time. Such a cargo molecule could be optics), and then both molecules disappeared concomitantly (Fig. used to define operationally the different compartments of the 1D; Movie 2). We found that, within the plane of the plasma endocytic pathway. The lipophilic dye FM4–64 and Ste2-GFP, an membrane, A488-␣-factor spots have a highly motile state and a integral membrane protein that is taken up by endocytosis, have nonmotile state. As shown in kymographs, all A488-␣-factor spots previously been used to label endocytic compartments fluores- in the nonmotile state are eventually joined by Abp1p and then cently in budding yeast. FM4–64 is introduced to cells externally internalized (100%; n ϭ 55) (Fig. 1E). In contrast, Abp1p never and it is a good marker for bulk-phase endocytosis (3, 5). However, once inside the cell, FM4–64 is transported along bifurcating pathways, with some dye entering a recycling pathway and the rest Conflict of interest statement: No conflicts declared. traveling to the vacuole (8); therefore, FM4–64’s utility for unam- Abbreviations: TIRF, total internal reflection fluorescence; LatA, Latrunculin A; mRFP, biguously labeling internal endocytic compartments to reveal spa- monomeric red fluorescent protein. tiotemporal features of the downstream pathway is limited. Ste2p is †J.Y.T. and J.T. contributed equally to this work. a receptor for the peptide ␣-factor, which is a mating pheromone. §To whom correspondence should be addressed. E-mail: [email protected]. Ste2-GFP has been used to mark endocytic compartments when © 2006 by The National Academy of Sciences of the USA www.pnas.org͞cgi͞doi͞10.1073͞pnas.0601042103 PNAS ͉ April 11, 2006 ͉ vol. 103 ͉ no. 15 ͉ 5793–5798 Downloaded by guest on September 29, 2021 Fig. 1. Structure and localization of fluorophor-conjugated ␣-factor. (A) Diagram of Alexa Fluor-488 (A488)- and Alexa Fluor-594 (A594)-␣-factor. (B and C) Ste2p receptor-dependent binding and internalization of Alexa-␣-factor. Alexa-␣-factor was added to wild-type (B)orste2⌬ (C) cells and was followed through the endocytic pathway for the indicated times. (D, F, and G) A488-␣-factor (TIRF optics) appeared in endocytic patches before Abp1p and Sla1p but after Ede1p (epifluorescence). Shown are single frames from the GFP and the RFP channels of the movie and a merged image (Upper) and time series of single patches from wild-type cells expressing the indicated fluorophor-tagged proteins (Lower). The time to acquire one image pair was 2 s. (E) Kymographs of time-lapse images collected at 2-s intervals. Arrows in D mark where the kymograph was generated. Numbers and the direction of the arrows in D correspond to those in E. Arrowheads (E Right) indicate independent A488-␣-factor-labeled spots. (H) Localization of A594-␣-factor and Sla1-GFP in cells treated with 200 ␮M LatA. After incubating cells expressing Sla1-GFP with 200 ␮M LatA at 25°C for 30 min, cells were incubated with A594-␣-factor at 0°C for 30 min in minimal medium lacking glucose in the continued presence of 200 ␮M LatA. The images were acquired at 2 min and 20 min after washing out unbound Alexa-␣-factor with glucose-containing medium and warming cells to 25°C in the continued presence of 200 ␮M LatA. (Scale bars, 2.5 ␮m.) joined the highly motile A488-␣-factor spots (n ϭ 120) (Fig. 1E out its lifetime (n ϭ 100) (Fig. 6 B and C). This behavior is similar Right, arrowheads). Similar to Abp1p, the endocytic coat protein to what has been described for clathrin, although both clathrin and Sla1p (2, 3) also joined preexisting A488-␣-factor spots and was Sla1p persist after Ede1p disappears, and, in contrast to Ede1p, they cointernalized with them (100%; n ϭ 47) (Fig. 1F; and see Movie both are internalized (see ref. 3 and Fig. 6B). Interestingly, we 3, which is published as supporting information on the PNAS web observed that Ede1p forms patches that are subsequently joined by site). Because TIRF was used to image A488-␣-factor and epiflu- A488-␣-factor. Thus, endocytic sites form before ␣-factor recruit- orescence to image Sla1p, A488␣-factor occasionally disappeared ment (Fig. 1G; and see Movie 4, which is published as supporting before Sla1p. Our observations establish that cortical actin patches information on the PNAS web site), consistent with recent findings are sites of receptor-mediated ␣-factor internalization, an impor- in mammalian cells (7). The movement and disassembly of Sla1p tant conclusion, because Chang et al. (9) recently proposed that patches are known to be inhibited by Latrunculin A (LatA) ␣-factor may be internalized by a pathway independent from the treatment (2).
Recommended publications
  • The Dynamics and Function of the Endolysosomal/Lysosomal System
    The Dynamics and Function of the Endolysosomal/Lysosomal System Luther John Davis University of Cambridge Homerton College This dissertation is submitted for the degree of Doctor of Philosophy September 2018 I Acknowledgements Firstly, I would like to thank Prof. J Paul Luzio for his invaluable guidance and effort towards the production and proofreading of this thesis. I would also like to thank Chloe Taylor, Ian Baines, Theo Dare, and Ashley Broom for their expertise, assistance and reassurance. I am grateful to the BBSRC and GSK for funding my project for four years. I thank Sally Gray, Nick Bright, and Lena Wartosch for their technical assistance and support. Finally I would like to express my gratitude to Matthew Gratian and Mark Bowen for training and assistance with microscopy, as well as Reiner Schulte, Chiara Cossetti, and Gabriela Grondys-Kotarba for their help with flow cytometry and cell sorting. II Preface This dissertation is the result of my own work and includes nothing which is the outcome of work done in collaboration except as declared in the Preface and specified in the text. It is not substantially the same as any that I have submitted, or, is being concurrently submitted for a degree or diploma or other qualification at the University of Cambridge or any other University or similar institution except as declared in the Preface and specified in the text. I further state that no substantial part of my dissertation has already been submitted, or, is being concurrently submitted for any such degree, diploma or other qualification at the University of Cambridge or any other University or similar institution except as declared in the Preface and specified in the text.
    [Show full text]
  • Vesicle Transport in Chloroplasts with Emphasis on Rab Proteins
    CORE Metadata, citation and similar papers at core.ac.uk Provided by Göteborgs universitets publikationer - e-publicering och e-arkiv Vesicle Transport in Chloroplasts with Emphasis on Rab Proteins Mohamed Alezzawi Department of Biological and Environmental Sciences, University of Gothenburg, Box 461, SE-405 30 Gothenburg, Sweden Abstract Chloroplasts perform photosynthesis using PSI and PSII during its light-dependent phase. Inside the chloroplast there is a membrane called thylakoid. The thylakoid membranes are an internal system of interconnected membranes that carry out the light reactions of photosynthesis. The thylakoid membranes do not produce their own lipids or proteins, so they are mainly transported from the envelope to the thylakoid for maintenance of e.g. the photosynthetic apparatus. An aqueous stroma made hinder between the envelope and thylakoid for the lipids to move between the two compartments. Vesicle transport is suggested to transport lipids to thylakoids supported by biochemical and ultra-structural data. Proteins could potentially also be transported by vesicles as cargo but this is not supported yet experimentally. However, proteins targeted to thylakoids are mediated by four pathways so far identified but it has been proposed that a vesicle transport could exist for proteins targeted to thylakoids as well similar to the cytosolic vesicle transport system. This thesis revealed similarity of vesicle transport inside the chloroplast to the cytosolic system. A novel Rab protein CPRabA5E (CP= chloroplast localized) was shown in Arabidopsis to be chloroplast localized and characterized to be important for thylakoid structure, plant development, and oxidative stress response. Moreover, CPRabA5e complemented the yeast homologues being involved in vesicle transport, and the cprabA5e mutants were affected for vesicle formation in the chloroplasts.
    [Show full text]
  • Cooperation of Mitochondrial and ER Factors in Quality Control of Tail
    RESEARCH ARTICLE Cooperation of mitochondrial and ER factors in quality control of tail-anchored proteins Verena Dederer1, Anton Khmelinskii1,2, Anna Gesine Huhn1, Voytek Okreglak3, Michael Knop1,4, Marius K Lemberg1* 1Centre for Molecular Biology of Heidelberg University (ZMBH), DKFZ-ZMBH Alliance, Heidelberg, Germany; 2Institute of Molecular Biology (IMB), Mainz, Germany; 3Calico Life Sciences LLC, South San Francisco, United States; 4Cell Morphogenesis and Signal Transduction, German Cancer Research Center (DKFZ), Heidelberg, Germany Abstract Tail-anchored (TA) proteins insert post-translationally into the endoplasmic reticulum (ER), the outer mitochondrial membrane (OMM) and peroxisomes. Whereas the GET pathway controls ER-targeting, no dedicated factors are known for OMM insertion, posing the question of how accuracy is achieved. The mitochondrial AAA-ATPase Msp1 removes mislocalized TA proteins from the OMM, but it is unclear, how Msp1 clients are targeted for degradation. Here we screened for factors involved in degradation of TA proteins mislocalized to mitochondria. We show that the ER-associated degradation (ERAD) E3 ubiquitin ligase Doa10 controls cytoplasmic level of Msp1 clients. Furthermore, we identified the uncharacterized OMM protein Fmp32 and the ectopically expressed subunit of the ER-mitochondria encounter structure (ERMES) complex Gem1 as native clients for Msp1 and Doa10. We propose that productive localization of TA proteins to the OMM is ensured by complex assembly, while orphan subunits are extracted by Msp1 and eventually degraded by Doa10. *For correspondence: DOI: https://doi.org/10.7554/eLife.45506.001 [email protected]. de Competing interests: The authors declare that no Introduction competing interests exist. Correct localization of proteins is essential to ensure their functionality and to establish the identity Funding: See page 19 of individual cellular organelles.
    [Show full text]
  • Investigation of Endosome and Lysosome Biology by Ultra Ph-Sensitive Nanoprobes☆
    ADR-13057; No of Pages 10 Advanced Drug Delivery Reviews xxx (2016) xxx–xxx Contents lists available at ScienceDirect Advanced Drug Delivery Reviews journal homepage: www.elsevier.com/locate/addr Investigation of endosome and lysosome biology by ultra pH-sensitive nanoprobes☆ Chensu Wang a,b,TianZhaoa,YangLia,GangHuanga, Michael A. White b,JinmingGaoa,⁎ a Department of Pharmacology, Simmons Comprehensive Cancer Center, University of Texas Southwestern Medical Center, 5323 Harry Hines Blvd., Dallas, TX 75390, USA b Department of Cell Biology, University of Texas Southwestern Medical Center, 5323 Harry Hines Blvd., Dallas, TX 75390, USA article info abstract Article history: Endosomes and lysosomes play a critical role in various aspects of cell physiology such as nutrient sensing, recep- Received 2 June 2016 tor recycling, protein/lipid catabolism, and cell death. In drug delivery, endosomal release of therapeutic payloads Received in revised form 29 August 2016 from nanocarriers is also important in achieving efficient delivery of drugs to reach their intracellular targets. Accepted 30 August 2016 Recently, we invented a library of ultra pH-sensitive (UPS) nanoprobes with exquisite fluorescence response to Available online xxxx subtle pH changes. The UPS nanoprobes also displayed strong pH-specific buffer effect over small molecular Keywords: bases with broad pH responses (e.g., chloroquine and NH4Cl). Tunable pH transitions from 7.4 to 4.0 of UPS Endocytic organelles nanoprobes cover the entire physiological pH of endocytic organelles (e.g., early and late endosomes) and lyso- pH sensitive nanoprobes somes. These unique physico-chemical properties of UPS nanoprobes allowed a ‘detection and perturbation’ Organelle imaging strategy for the investigation of luminal pH in cell signaling and metabolism, which introduces a pH buffering nanotechnology-enabled paradigm for the biological studies of endosomes and lysosomes.
    [Show full text]
  • Ipomoeassin-F Disrupts Multiple Aspects of Secretory Protein
    www.nature.com/scientificreports OPEN Ipomoeassin‑F disrupts multiple aspects of secretory protein biogenesis Peristera Roboti1*, Sarah O’Keefe1, Kwabena B. Duah2, Wei Q. Shi2 & Stephen High1* The Sec61 complex translocates nascent polypeptides into and across the membrane of the endoplasmic reticulum (ER), providing access to the secretory pathway. In this study, we show that Ipomoeassin‑F (Ipom‑F), a selective inhibitor of protein entry into the ER lumen, blocks the in vitro translocation of certain secretory proteins and ER lumenal folding factors whilst barely afecting others such as albumin. The efects of Ipom‑F on protein secretion from HepG2 cells are twofold: reduced ER translocation combined, in some cases, with defective ER lumenal folding. This latter issue is most likely a consequence of Ipom‑F preventing the cell from replenishing its ER lumenal chaperones. Ipom‑F treatment results in two cellular stress responses: frstly, an upregulation of stress‑inducible cytosolic chaperones, Hsp70 and Hsp90; secondly, an atypical unfolded protein response (UPR) linked to the Ipom‑F‑mediated perturbation of ER function. Hence, although levels of spliced XBP1 and CHOP mRNA and ATF4 protein increase with Ipom‑F, the accompanying increase in the levels of ER lumenal BiP and GRP94 seen with tunicamycin are not observed. In short, although Ipom‑F reduces the biosynthetic load of newly synthesised secretory proteins entering the ER lumen, its efects on the UPR preclude the cell restoring ER homeostasis. Afer synthesis at the endoplasmic reticulum (ER), many soluble proteins including cytokines, hormones and enzymes follow the secretory pathway to the cell surface, where they are released by exocytosis (hereafer called secretory proteins)1.
    [Show full text]
  • Lysosomal Biology and Function: Modern View of Cellular Debris Bin
    cells Review Lysosomal Biology and Function: Modern View of Cellular Debris Bin Purvi C. Trivedi 1,2, Jordan J. Bartlett 1,2 and Thomas Pulinilkunnil 1,2,* 1 Department of Biochemistry and Molecular Biology, Dalhousie University, Halifax, NS B3H 4H7, Canada; [email protected] (P.C.T.); jjeff[email protected] (J.J.B.) 2 Dalhousie Medicine New Brunswick, Saint John, NB E2L 4L5, Canada * Correspondence: [email protected]; Tel.: +1-(506)-636-6973 Received: 21 January 2020; Accepted: 29 April 2020; Published: 4 May 2020 Abstract: Lysosomes are the main proteolytic compartments of mammalian cells comprising of a battery of hydrolases. Lysosomes dispose and recycle extracellular or intracellular macromolecules by fusing with endosomes or autophagosomes through specific waste clearance processes such as chaperone-mediated autophagy or microautophagy. The proteolytic end product is transported out of lysosomes via transporters or vesicular membrane trafficking. Recent studies have demonstrated lysosomes as a signaling node which sense, adapt and respond to changes in substrate metabolism to maintain cellular function. Lysosomal dysfunction not only influence pathways mediating membrane trafficking that culminate in the lysosome but also govern metabolic and signaling processes regulating protein sorting and targeting. In this review, we describe the current knowledge of lysosome in influencing sorting and nutrient signaling. We further present a mechanistic overview of intra-lysosomal processes, along with extra-lysosomal processes, governing lysosomal fusion and fission, exocytosis, positioning and membrane contact site formation. This review compiles existing knowledge in the field of lysosomal biology by describing various lysosomal events necessary to maintain cellular homeostasis facilitating development of therapies maintaining lysosomal function.
    [Show full text]
  • Glycosylation Inhibition Reduces Cholesterol Accumulation in NPC1 Protein-Deficient Cells
    Glycosylation inhibition reduces cholesterol accumulation in NPC1 protein-deficient cells Jian Li1, Maika S. Deffieu1, Peter L. Lee1, Piyali Saha, and Suzanne R. Pfeffer2 Department of Biochemistry, Stanford University School of Medicine, Stanford, CA 94305-5307 Edited by Stuart A. Kornfeld, Washington University School of Medicine, St. Louis, MO, and approved October 28, 2015 (received for review October 16, 2015) Lysosomes are lined with a glycocalyx that protects the limiting In this paper, we have used two approaches to modify the gly- membrane from the action of degradative enzymes. We tested the cocalyx. Alteration of glycosylation decreases lysosomal cholesterol hypothesis that Niemann-Pick type C 1 (NPC1) protein aids the transfer levels in NPC1-deficient Chinese hamster ovary (CHO) and human of low density lipoprotein-derived cholesterol across this glycocalyx. A cells. These experiments support a model in which NPC1 protein prediction of this model is that cells will be less dependent upon NPC1 functions to help cholesterol traverse the glycocalyx that lines the if their glycocalyx is decreased in density. Lysosome cholesterol content interior of lysosome limiting membranes. was significantly lower after treatment of NPC1-deficient human fibroblasts with benzyl-2-acetamido-2-deoxy-α-D-galactopyrano- Results and Discussion side, an inhibitor of O-linked glycosylation. Direct biochemical LAMP1 and LAMP2 proteins represent the major glycoproteins measurement of cholesterol showed that lysosomes purified from of the lysosome membrane (12). These proteins are glycosylated NPC1-deficient fibroblasts contained at least 30% less cholesterol on both asparagine residues (N linked) and serine or threonine when O-linked glycosylation was blocked.
    [Show full text]
  • Snapin Snaps Into the Dynein Complex for Late Endosome-Lysosome Trafficking and Autophagy
    View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Elsevier - Publisher Connector Neuron Previews Snapin Snaps into the Dynein Complex for Late Endosome-Lysosome Trafficking and Autophagy Michisuke Yuzaki1,2,* 1Department of Physiology, School of Medicine, Keio University, Tokyo 160-8582, Japan 2CREST, Japan Science and Technology Agency, Saitama 332-0012, Japan *Correspondence: [email protected] DOI 10.1016/j.neuron.2010.09.036 Late endosome-lysosome trafficking plays a key role in regulating cell surface signaling and degradation of intracellular components by autophagy. New work by Cai and coworkers in this issue of Neuron provides evidence that snapin regulates the recruitment of late endosomes to the dynein motor complex for retrograde trafficking along microtubules and maturation of lysosomes. Plasma membrane endocytosis regulates Klumperman, 2009). Therefore, late endo- complex by directly binding to dynein neuronal signaling processes by control- some-lysosome trafficking plays a key intermediate chain (DIC). Snapin was ling the number of functional receptors role in coordinating the heterophagy and originally identified as a protein that and channels available at the cell surface. autophagy involved in critical neuronal binds to synaptosomal-associated pro- Endosomal cargoes are selected to take signaling pathways and functions, such tein 25 kDa (SNAP-25) and modulates one of two major routes: returning to as synaptic plasticity and cell survival. neurosecretion by stabilizing the release- the plasma membrane in recycling endo- Lysosomes are predominantly localized ready pool of dense-core and synaptic somes, or passing through late endo- in the soma near the microtubule-orga- vesicles and facilitating synchronized somes before delivery to lysosomes for nizing center.
    [Show full text]
  • Control of Cytoskeletal Dynamics by Β-Arrestin1/Myosin Vb Signaling Regulates Endosomal Sorting and Scavenging Activity of the Atypical Chemokine Receptor ACKR2
    Article Control of Cytoskeletal Dynamics by β-Arrestin1/Myosin Vb Signaling Regulates Endosomal Sorting and Scavenging Activity of the Atypical Chemokine Receptor ACKR2 1,2, 1,3, 1,4 1,5 Alessandro Vacchini y, Cinzia Cancellieri y, Samantha Milanesi , Sabrina Badanai , Benedetta Savino 1 , Francesco Bifari 4 , Massimo Locati 1,4 , Raffaella Bonecchi 1,6,* and Elena Monica Borroni 1,4,* 1 Humanitas Clinical and Research Center–IRCCS, 20089 Rozzano (Mi), Italy; [email protected] (A.V.); [email protected] (C.C.); [email protected] (S.M.); [email protected] (S.B.); [email protected] (B.S.); [email protected] (M.L.) 2 Experimental Immunology, Department of Biomedicine, University of Basel and University Hospital Basel, CH-4031 Basel, Switzerland 3 Cell Culture Facility Unit, IFOM Istituto FIRC di Oncologia Molecolare, 20139 Milan, Italy 4 Department of Medical Biotechnologies and Translational Medicine, University of Milan, 20090 Milan, Italy; [email protected] 5 Cell Adhesion Unit, Division of Neuroscience, IRCSS San Raffaele Scientific Institute and San Raffaele University, via Olgettina 58, 20132 Milano, Italy 6 Humanitas University, Department of Biomedical Sciences, 20090 Pieve Emanuele, Italy * Correspondence: raff[email protected] (R.B.); [email protected] (E.M.B.); Tel.: +39-02-82245117 (R.B.); +39-02-82245130 (E.M.B.) These authors equally contributed to this work. y Received: 24 June 2020; Accepted: 15 September 2020; Published: 17 September 2020 Abstract: The atypical chemokine receptor ACKR2, formerly named D6, is a scavenger chemokine receptor with a non-redundant role in the control of inflammation and immunity.
    [Show full text]
  • Secretory Vesicle Polar Sorting, Endosome Recycling and 2 Cytoskeleton Organization Require the AP-1 Complex in 3 Aspergillus Nidulans
    Genetics: Early Online, published on June 20, 2018 as 10.1534/genetics.118.301240 1 1 Secretory vesicle polar sorting, endosome recycling and 2 cytoskeleton organization require the AP-1 complex in 3 Aspergillus nidulans 4 5 Olga Martzoukou, George Diallinas* and Sotiris Amillis* 6 7 Department of Biology, National and Kapodistrian University of Athens, 8 Panepistimioupolis, 15784, Athens, Greece 9 *Corresponding authors: [email protected], [email protected] 10 11 Key words: 12 fungi/traffic/secretion/Rab GTPases/transport/microtubules 13 14 15 16 17 18 19 20 21 22 Copyright 2018. 2 23 24 Abstract 25 The AP-1 complex is essential for membrane protein traffic via its role in the 26 pinching-off and sorting of secretory vesicles from the trans-Golgi and/or endosomes. 27 While its essentiality is undisputed in metazoa, its role in simpler eukaryotes seems 28 less clear. Here we dissect the role of AP-1 in the filamentous fungus Aspergillus 29 nidulans and show that it is absolutely essential for growth due to its role in clathrin- 30 dependent maintenance of polar traffic of specific membrane cargoes towards the 31 apex of growing hyphae. We provide evidence that AP-1 is involved in both 32 anterograde sorting of RabERab11-labeled secretory vesicles and RabA/BRab5- 33 dependent endosome recycling. Additionally, AP-1 is shown to be critical for 34 microtubule and septin organization, further rationalizing its essentiality in cells that 35 face the challenge of cytoskeleton-dependent polarized cargo traffic. This work also 36 opens a novel issue on how non-polar cargoes, such as transporters, are sorted to the 37 eukaryotic plasma membrane.
    [Show full text]
  • Lysosomal Exocytosis, Exosome Release and Secretory Autophagy: the Autophagic- and Endo-Lysosomal Systems Go Extracellular
    International Journal of Molecular Sciences Review Lysosomal Exocytosis, Exosome Release and Secretory Autophagy: The Autophagic- and Endo-Lysosomal Systems Go Extracellular 1, 1, 1,2 1 3 Sandra Buratta y, Brunella Tancini y, Krizia Sagini , Federica Delo , Elisabetta Chiaradia , Lorena Urbanelli 1,* and Carla Emiliani 1,4,* 1 Department of Chemistry, Biology and Biotechnology, University of Perugia, Via del Giochetto, 06123 Perugia, Italy; [email protected] (S.B.); [email protected] (B.T.); [email protected] (K.S.); [email protected] (F.D.) 2 Department of Molecular Cell Biology, Institute for Cancer Research, Oslo University Hospital-The Norwegian Radium Hospital, 0379 Montebello, Oslo, Norway 3 Department of Veterinary Medicine, University of Perugia, Via S. Costanzo 4, 06126 Perugia, Italy; [email protected] 4 Centro di Eccellenza sui Materiali Innovativi Nanostrutturati (CEMIN), University of Perugia, Via del Giochetto, 06123 Perugia, Italy * Correspondence: [email protected] (L.U.); [email protected] (C.E.); Tel.: +39-075-585-7440 (L.U.); +39-075-585-7438 (C.E.); Fax: +39-075-585-7436 (L.U. & C.E.) Both authors contributed equally to this work. y Received: 17 March 2020; Accepted: 6 April 2020; Published: 8 April 2020 Abstract: Beyond the consolidated role in degrading and recycling cellular waste, the autophagic- and endo-lysosomal systems play a crucial role in extracellular release pathways. Lysosomal exocytosis is a process leading to the secretion of lysosomal content upon lysosome fusion with plasma membrane and is an important mechanism of cellular clearance, necessary to maintain cell fitness. Exosomes are a class of extracellular vesicles originating from the inward budding of the membrane of late endosomes, which may not fuse with lysosomes but be released extracellularly upon exocytosis.
    [Show full text]
  • Chapter 03 Lecture
    Chapter 03 Lecture 1 The Prokaryotic Cell Pilus Ribosomes Cytoplasm Chromosome (DNA) Nucleoid Cell wall Flagellum (b) 0.5 µm Capsule Cell wall Cytoplasmic membrane (a) The Prokaryotic Cell 3.4. The Cytoplasmic Membrane . Cytoplasmic membrane defines boundary of cell • Phospholipid bilayer embedded with proteins • Hydrophobic tails face in; hydrophilic tails face out • Serves as semipermeable membrane • Proteins serve numerous functions • Selective gates • Sensors of environmental conditions Phospholipid bilayer • Fluid mosaic model: proteins drift about in lipid bilayer Hydrophilic head Hydrophobic tail Proteins 3.4. The Cytoplasmic Membrane . Cytoplasmic membrane defines boundary of cell (continued…) • Bacteria and Archaea have same general structure of cytoplasmic membranes • Distinctly different lipid compositions • Lipid tails of Archaea are not fatty acids and are connected differently to glycerol Permeability of Lipid Bilayer . Cytoplasmic membrane is selectively permeable • O2, CO2, N2, small hydrophobic molecules, and water pass freely • Some cells facilitate water passage with aquaporins • Other molecules must be moved across membrane via transport systems Pass through easily: Passes through: Do not pass through: Gases (O2, CO2, N2) Water Sugars Small hydrophobic Ions molecules Amino acids ATP Water Macromolecules Aquaporin (a) The cytoplasmic membrane is selectively permeable. Gases, small (b) Aquaporins allow water to pass through the cytoplasmic membrane hydrophobic molecules, and water are the only substances that more easily.
    [Show full text]