Biological Diversity – from Cell to Ecosystem
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Long Rdna Amplicon Sequencing of Insect-Infecting Nephridiophagids
www.nature.com/scientificreports OPEN Long rDNA amplicon sequencing of insect‑infecting nephridiophagids reveals their afliation to the Chytridiomycota and a potential to switch between hosts Jürgen F. H. Strassert 1*, Christian Wurzbacher 2, Vincent Hervé 3, Taraha Antany1, Andreas Brune 3 & Renate Radek 1* Nephridiophagids are unicellular eukaryotes that parasitize the Malpighian tubules of numerous insects. Their life cycle comprises multinucleate vegetative plasmodia that divide into oligonucleate and uninucleate cells, and sporogonial plasmodia that form uninucleate spores. Nephridiophagids are poor in morphological characteristics, and although they have been tentatively identifed as early‑branching fungi based on the SSU rRNA gene sequences of three species, their exact position within the fungal tree of live remained unclear. In this study, we describe two new species of nephridiophagids (Nephridiophaga postici and Nephridiophaga javanicae) from cockroaches. Using long‑read sequencing of the nearly complete rDNA operon of numerous further species obtained from cockroaches and earwigs to improve the resolution of the phylogenetic analysis, we found a robust afliation of nephridiophagids with the Chytridiomycota—a group of zoosporic fungi that comprises parasites of diverse host taxa, such as microphytes, plants, and amphibians. The presence of the same nephridiophagid species in two only distantly related cockroaches indicates that their host specifcity is not as strict as generally assumed. Insects are the most diverse group of all animals. So far, about one million species have been described and recent estimates for extant species range from 2.6 to 7.8 million1,2. Tey are globally distributed and impact human life at numerous levels. In agriculture, for instance, insects play a major role as both pollinators (e.g., honey bees) and pests that feed on crops (e.g., grasshoppers). -
Sgs Qualifor Forest Management Certification
SGS QUALIFOR Doc. Number: AD 36A-08 (Associated Documents) Doc. Version date: 21 Sept. 2010 Page: 1 of 80 Approved by: Gerrit Marais FOREST MANAGEMENT CERTIFICATION REPORT RAPORT Z PROCESU CERTIFIKACJI GOSPODARKI LE ŚNEJ SECTION A: PUBLIC SUMMARY ROZDZIAŁ A: PUBLICZNIE DOSTĘPNE STRESZCZENIE Project Nr: PL/FR 10728 Nr projektu: Regional Directorate of State Forests in Białystok Client: Regionalna Dyrekcja Lasów Pa ństwowych w Białymstoku http://www.bialystok.lasy.gov.pl/web/augustow http://www.bialystok.lasy.gov.pl/web/bielsk http://www.bialystok.lasy.gov.pl/web/borki http://www.bialystok.lasy.gov.pl/web/czarna_bialostocka http://www.bialystok.lasy.gov.pl/web/czerwony_dwor http://www.bialystok.lasy.gov.pl/web/dojlidy http://www.bialystok.lasy.gov.pl/web/drygaly http://www.bialystok.lasy.gov.pl/web/elk http://www.bialystok.lasy.gov.pl/web/gizycko Web Page: Adres www : http://www.bialystok.lasy.gov.pl/web/goldap http://www.bialystok.lasy.gov.pl/web/gleboki_brod http://www.bialystok.lasy.gov.pl/web/knyszyn http://www.bialystok.lasy.gov.pl/web/krynki http://www.bialystok.lasy.gov.pl/web/lomza http://www.bialystok.lasy.gov.pl/web/maskulinskie http://www.bialystok.lasy.gov.pl/web/nowogrod http://www.bialystok.lasy.gov.pl/web/nurzec http://www.bialystok.lasy.gov.pl/web/olecko http://www.bialystok.lasy.gov.pl/web/pisz SGS services are rendered in accordance with the applicable SGS General Conditions of Service accessible at http://www.sgs.com/terms_and_conditions.htm SGS South Africa (Qualifor Programme) 58 Melville Road, Booysens - PO Box 82582, Southdale 2185 -SouthSouth AAfricafrica Systems and Services Certification Division Contact Programme Director at t. -
Contribuição Para O Conhecimento De Chytridiomycota Da “Reserva Biológica De Paranapiacaba”, Santo André, SP, Brasil
Contribuição para o conhecimento de Chytridiomycota da “Reserva Biológica de Paranapiacaba”, Santo André, SP, Brasil Pires-Zottarelli, CLA & Gomes, AL Biota Neotropica, Vol.7 (number 3): 2007; p. 309-329. A versão on-line completa deste artigo está disponível em: On line version of this paper is available at: http://www.biotaneotropica.org.br/v7n3/pt/abstract?inventory+bn02207032007 Recebido em/ Data Received 27/12/06 - Versão reformulada recebida em/ Revised 17/09/07 - Publicado em/ Accepted 24/09/07 ISSN 1676-0603 (on-line) Biota Neotropica é uma revista do Programa BIOTA/FAPESP - O Instituto Virtual da Biodiversidade, que publica resultados de pesquisa original, vinculada ou não ao programa, que abordem a temática caracterização, conservação e uso sustentável da biodiversidade na região Neotropical. Biota Neotropica is an electronic, peer-reviewed journal edited by the Program BIOTA/FAPESP: The Virtual Institute of Biodiversity. This journal’s aim is to disseminate the results of original research work, associated or not to the program, concerned with characterization, conservation and sustainable use of biodiversity within the Neotropical region. A Biota Neotropica é uma revista eletrônica e está integral e gratuitamente disponível no endereço http://www.biotaneotropica.org.br Biota Neotropica is an eletronic journal which is available free at the following site http://www.biotaneotropica.org.br Contribuição para o conhecimento de Chytridiomycota da “Reserva Biológica de Paranapiacaba”, Santo André, SP, Brasil Carmen Lidia Amorim Pires-Zottarelli1,2 & Alexandra Lenk Gomes1 Biota Neotropica v7 (n3) - http://www.biotaneotropica.org.br/v7n3/pt/abstract?inventory+bn02207032007 Recebido em 27/12/06 Versão reformulada recebida em 17/09/07 Publicado em 24/09/07 1Seção de Micologia e Liquenologia, Instituto de Botânica de São Paulo, CP 3005, CEP 01061-970, São Paulo, Brasil 2Autor para correspondência: Carmen Lidia Amorim Pires-Zottarelli, e-mail: [email protected] Abstract Pires-Zottarelli, C.L.A. -
Itapeti E O Seu Entorno
Em razão de sua importância eco- nômica e social para o município de Mogi das Cruzes e do alto grau de degradação que a Serra apre- senta, vários profi ssionais ao longo dos últimos dez anos, trabalharam de forma sistemática para a produ- ção de conhecimentos sobre a sua ocupação, seus aspectos sociais e biológicos. Assim, os capítulos contidos nesse livro representam a compilação de todas as informa- ções com embasamento científi co, de forma a levar o leitor a enten- der um pouco sobre o passado e o presente da Serra do Itapeti e o seu entorno. Itapeti do Serra Serra do VITOR FERNANDES OLIVEIRA DE MIRANDA MARIA SANTINA DE CASTRO MORINI Itapeti Aspectos Históricos, Sociais e Naturalísticos MARIA SANTINA DE CASTRO MORINI VITOR FERNANDES OLIVEIRA DE MIRANDA Serra do Itapeti Aspectos Históricos, Sociais e Naturalísticos Organizadores MARIA SANTINA DE CASTRO MORINI VITOR FERNANDES OLIVEIRA DE MIRANDA 1ª Edição 2012 Rua Machado de Assis, 10-35 Vila América • CEP 17014-038 • Bauru, SP Fone (14) 3313-7968 • www.canal6editora.com.br S4871 Serra do Itapeti: Aspectos Históricos, Sociais e Naturalísticos / Maria Santina de Castro Morini e Vitor Fernandes Oliveira de Miranda (organizadores). - - Bauru, SP: Canal 6, 2012. 400 p. ; 29 cm. ISBN 978-85-7917-174-1 1. Serra do Itapeti. 2. Mata Atlântica. I. Morini, Maria Santina de Castro. II. Miranda, Vitor Fernandes Oliveira de. III. Título. CDD: 577.34 Copyright© Canal6, 2012 Impressão e Acabamento: Av. Dr. Pedro Camarinha, 31 - Santa Cruz do Rio Pardo-SP - T: (14) 3332.1155 - www.graficaviena.com.br PRESERVE A IMPRESSO EM NATUREZA PAPEL RECICLÁVEL Este livro é dedicado .. -
Distribution of Lichen Species of the Genus Lepraria in the Knyszyn Forest (Ne Poland) in Different Forest Plant Communities
Polish Botanical Journal 62(2): 279–285, 2017 e-ISSN 2084-4352 DOI: 10.1515/pbj-2017-0026 ISSN 1641-8190 DISTRIBUTION OF LICHEN SPECIES OF THE GENUS LEPRARIA IN THE KNYSZYN FOREST (NE POLAND) IN DIFFERENT FOREST PLANT COMMUNITIES Anna Matwiejuk Abstract. The aim of the study was to evaluate the distribution of lichen species of the genus Lepraria in Knyszyn Forest (NE Poland) to different forest plant communities. Six species of Lepraria [L. eburnea J. R. Laundon, L. elobata Tønsberg, L. incana (L.) Ach., L. jackii Tønsberg, L. lobificans Nyl. and L. vouaxii (Hue) R. C. Harris] recorded from Knyszyn Forest. Lepraria eburnea is a new species for the studied area. The most common species were Lepraria incana and L. lobificans.Among the studied forest communities the richest in species (5 species of Lepraria) were oak-hornbeam forest (Tilio-Carpinetum), and the least species-rich (2 species) were maple-linden slope forest (Aceri-Tilietum), alder carr (Carici elongatae-Alnetum) and spruce forest (Sphagno girgensohnii-Piceetum). The richest lichen diversity in the Knyszyn Forest was found on deciduous trees such as Carpinus betulus L. and Quercus robur L. (4 species), Tilia cordata Mill. (3 spp.), and conifers such as Picea abies (L.) H. Karst. and Pinus sylvestris L. (3 spp.). Key words: biodiversity, lichenized fungi, sterile lichens, secondary substances, lowland forests, new records Anna Matwiejuk, Department of Plant Ecology, Institute of Biology, University of Bialystok, Konstanty Ciolkowski 1J street, 15-234 Bialystok, Poland; e-mail: [email protected] Introduction The species of the genus Lepraria Ach. are li- 2007), South Korea (Joshi et al. -
Clade (Kingdom Fungi, Phylum Chytridiomycota)
TAXONOMIC STATUS OF GENERA IN THE “NOWAKOWSKIELLA” CLADE (KINGDOM FUNGI, PHYLUM CHYTRIDIOMYCOTA): PHYLOGENETIC ANALYSIS OF MOLECULAR CHARACTERS WITH A REVIEW OF DESCRIBED SPECIES by SHARON ELIZABETH MOZLEY (Under the Direction of David Porter) ABSTRACT Chytrid fungi represent the earliest group of fungi to have emerged within the Kingdom Fungi. Unfortunately despite the importance of chytrids to understanding fungal evolution, the systematics of the group is in disarray and in desperate need of revision. Funding by the NSF PEET program has provided an opportunity to revise the systematics of chytrid fungi with an initial focus on four specific clades in the order Chytridiales. The “Nowakowskiella” clade was chosen as a test group for comparing molecular methods of phylogenetic reconstruction with the more traditional morphological and developmental character system used for classification in determining generic limits for chytrid genera. Portions of the 18S and 28S nrDNA genes were sequenced for isolates identified to genus level based on morphology to seven genera in the “Nowakowskiella” clade: Allochytridium, Catenochytridium, Cladochytrium, Endochytrium, Nephrochytrium, Nowakowskiella, and Septochytrium. Bayesian, parsimony, and maximum likelihood methods of phylogenetic inference were used to produce trees based on one (18S or 28S alone) and two-gene datasets in order to see if there would be a difference depending on which optimality criterion was used and the number of genes included. In addition to the molecular analysis, taxonomic summaries of all seven genera covering all validly published species with a listing of synonyms and questionable species is provided to give a better idea of what has been described and the morphological and developmental characters used to circumscribe each genus. -
Aquatic Fungi and Straminipilous Organisms in the Lakes of the Ełckie District
Pol. J. Environ. Stud. Vol. 25, No. 5 (2016), 1921-1930 DOI: 10.15244/pjoes/62758 Original Research Aquatic Fungi and Straminipilous Organisms in the Lakes of the Ełckie District Anna Godlewska1*, Bożena Kiziewicz1, Elżbieta Muszyńska1, Dorota Jankowska2 1Departament of General Biology, Medical University, A. Mickiewicza 2C, 15-222 Białystok, Poland 2 Department of Statistics and Medical Informatics, Szpitalna 37, 15-295, Poland Received: 4 March 2016 Accepted: 20 April 2016 Abstract We analyzed the species composition of fungi and straminipilous organisms in relation to hydrochemical conditions in six lakes within the Ełckie Lake District. The mycological investigations conducted in two vegetative seasons (2014-15) identified 44 species (eight aquatic fungi and 36 straminipilous organisms). The largest number of fungus species were found in lakes Łaśmiady (23), Szarek (22), and Krzywe (20), and the fewest were detected in Ełckie (12), Rajgrodzkie (13), and Dręstwo (14). The diversity of the quantitative and qualitative composition of the mycobiota was probably associated with the content of biogenic compounds and organic substances in the water. The elevated levels of these parameters (lakes: Łaśmiady, Szarek, and Krzywe) stimulated the growth and development of fungi and straminipilous organisms, whereas very high levels of biogenic compounds and organic matter (Lake Ełckie) and their very low content (Lake Dręstwo) had an inhibitory effect. Among the isolated taxa, there were parasites of amphibians and their spawn, and fish and eggs, including Achlya americana, Ac. polyandra, Saprolegnia parasitica, and S. ferax. Some species included pathogens of crayfish and other aquatic crustaceans such as Myzocytium microsporum, M. zoophthorum, Aphanomyces astaci, and Ap. -
Rural Tourist Attractions for Chinese Tourists
2019 Rural Tourist Attractions for Chinese Tourists . Hiiumaa | Estonia . Karhuseutu | Finland . Knyszyn Forest | Poland ePublication | February 2019 “One Belt One Route – Baltic Silk Route” (OBORoute) by 5 Rural Tourist for Chinese Tourists Attractions Co-operation Project of Three Baltic Countries “One Belt One Route – Baltic Silk Route” (OBORoute) 7 Estonia Hiiumaa Island 15 Finland Karhuseutu Region 21 Poland Knyszyn Forest OBORoute | One Belt One Route – Baltic Silk Route 18 Rural Tourist Attractions for Chinese Tourists With this publication we wish to present some unique, rural – “countryside” – tourist attractions of three Baltic country locations: . Hiiumaa (Estonia) . Karhuseutu (Finland) . Knyszyn Forest (Poland) This ePublication is addressed especially for the travelling agencies operating in Europe. The mutual co-operation project “OBORoute” What is OBORoute? “One Belt One Route – Baltic Silk Route” is a project of three Baltic Leader-organizations: LAG Karhuseutu (Satakunta, Finland), LAG Hiiumaa (Estonia) and LAG Puszcza Knyszynska (Poland). The project has been led by Prizztech Oy (Pori, Finland). Three networking seminars were arranged in all participant locations (Estonia, Poland and Finland), in order to develor a mutual understanding of the Chinese tourists’ needs. Based on those three seminars we have built up this specific ePublication, in co-operation with China experts and the local micropreneurs and institutions. ePublication Work Group: . Estonian materials | Anne-Ly Torstensson (LAG Hiiumaa, Estonia) . Finnish materials | Merja Lehtonen (Prizztech Oy, Finland) . Polish materials | Pawel Tadejko (LAG Puszcza Knyszynska, Poland) OBORoute. Lay | -Oneout of Belt the publicationOne Route | Merja– Baltic Lehtonen Silk Route (Prizztech Oy, Finland) 18 Estonia | Hiiumaa HIIUMAA ISLAND (Estonia) Enjoy fresh air and wild nature Estonia | Hiiumaa This beautiful isolated Hiiumaa Island belongs to the UNESCO Man and Biosphere reserve because of the authentic setting, tranquillity and sustainable way of life. -
(Chytridiomycota): Karlingiella (Gen
Mycologia ISSN: 0027-5514 (Print) 1557-2536 (Online) Journal homepage: https://www.tandfonline.com/loi/umyc20 Novel taxa in Cladochytriales (Chytridiomycota): Karlingiella (gen. nov.) and Nowakowskiella crenulata (sp. nov.) Gustavo H. Jerônimo, Ana L. Jesus, D. Rabern Simmons, Timothy Y. James & Carmen L. A. Pires-Zottarelli To cite this article: Gustavo H. Jerônimo, Ana L. Jesus, D. Rabern Simmons, Timothy Y. James & Carmen L. A. Pires-Zottarelli (2019) Novel taxa in Cladochytriales (Chytridiomycota): Karlingiella (gen. nov.) and Nowakowskiellacrenulata (sp. nov.), Mycologia, 111:3, 506-516, DOI: 10.1080/00275514.2019.1588583 To link to this article: https://doi.org/10.1080/00275514.2019.1588583 Published online: 23 Apr 2019. Submit your article to this journal Article views: 52 View Crossmark data Full Terms & Conditions of access and use can be found at https://www.tandfonline.com/action/journalInformation?journalCode=umyc20 MYCOLOGIA 2019, VOL. 111, NO. 3, 506–516 https://doi.org/10.1080/00275514.2019.1588583 Novel taxa in Cladochytriales (Chytridiomycota): Karlingiella (gen. nov.) and Nowakowskiella crenulata (sp. nov.) Gustavo H. Jerônimo a, Ana L. Jesusa, D. Rabern Simmons b, Timothy Y. James b, and Carmen L. A. Pires- Zottarellia aNúcleo de Pesquisa em Micologia, Instituto de Botânica, São Paulo, São Paulo 04301-902, Brazil; bDepartment of Ecology and Evolutionary Biology, University of Michigan, Ann Arbor, Michigan 48109-1085 ABSTRACT ARTICLE HISTORY Six Nowakowskiella species from Brazil were identified and purified on corn meal agar (CMA) plus Received 5 November 2018 glucose and Peptonized Milk-Tryptone-Glucose (PmTG) media and placed into a phylogenetic Accepted 26 February 2019 framework for the genus. -
Różnorodność Biologiczna – Od Komórki Do Ekosystemu. Rośliny I Grzyby W Zmieniających Się Warunkach Środowiska
Różnorodność biologiczna – od komórki do ekosystemu. Rośliny i grzyby w zmieniających się warunkach środowiska Polskie Towarzystwo Botaniczne Oddział w Białymstoku Różnorodność biologiczna – od komórki do ekosystemu. Rośliny i grzyby w zmieniających się warunkach środowiska pod redakcją Iwony Ciereszko i Andrzeja Bajguza Polskie Towarzystwo Botaniczne Białystok 2013 Redakcja naukowa dr hab. Iwona Ciereszko, prof. UwB dr hab. Andrzej Bajguz Recenzenci prof. dr hab. Elżbieta Romanowska; prof. dr hab. Wiesław Fałtynowicz; prof. dr hab. Czesław Hołdyński; dr hab. Iwona Ciereszko, prof. UwB; dr hab. Mirosława Kupryjanowicz, prof. UwB; dr hab. Grażyna Łaska, prof. PB; dr hab. Dorota Nalepka, prof. PAN, Kraków; dr hab. Andrzej Bajguz; dr hab. Agnieszka Gniazdowska-Piekarska; dr hab. Bożena Kiziewicz; dr Anna Matwiejuk Copyright © 2013 by: Polskie Towarzystwo Botaniczne – Oddział w Białymstoku. Wszystkie prawa zastrzeżone ISBN 978-83-62069-37-8 Korekta językowa: Urszula Glińska Projekt okładki: Magdalena Muśko wykorzystano fotografie autorstwa: Anety Adamczuk; Ewy Żebrowskiej; Piotra Tałałaja Redaktor techniczny: Andrzej Poskrobko Realizacja: Agencja Wydawnicza EkoPress 601 311 838 Spis treści Wstęp ................................................................................................................................................ 7 1. Elżbieta Romanowska, Wioleta Wasilewska, Ilona Bacławska, Alicja Buczyńska, Maksymilian Zienkiewicz Środowiskowe i metaboliczne uwarunkowania fotosyntezy typu C4 ............................. 9 2. Agnieszka -
A N N a L E S Epiphytic Lichen-Dominated Communities In
ANNALES U N IV ERSIT ATIS M ARIAE C U RIE - S K Ł O D O W S K A LUBLIN - POLONIA VOL. LVI SECTIO C 2001 KATARZYNA KOLANKO Institute of Biology, llniversity of Białystok, Świerkowa 20B, 15-950 Białystok, Poland Epiphytic lichen-dominated communities in the Knyszyn Forest Zbiorowiska porostów epifitycznych w Puszczy Knyszyńskiej SUMMARY The paper aimed at describing the characteristics of the epiphytic lichen communities in the Knyszyn Forest. The investigations were extended over almost all the trees and shrubs growing in the Forest. The outdoor and phytosociological studies of lichens were carried out according to the principles of the Braun-Blanquet method modified by Klement and Barkman for examining lichen associations. The epiphytic flora was classified among seven associations. Pseudevernietum furfuraceae is the most common in the Knyszyn Forest. Two groups were assigned among epiphytic lichen associations; the first one: Chaenothecetum ferrugineae, Hypocenomycetum scalaris, Parmeliopsidetum ambiguae subass. Parmeliopsidetosum aleuritis and Pseudevernietum furfuraceae growing on pine, spruce and mixed forests, and the second group: Pertusarietum amarae, Pyrenuletum nitidae and Thelotremetum lepadini growing only in deciduous trees forests on smooth bark. They are characteristic associations of primeval forests. STRESZCZENIE Celem badań była charakterystyka fitosocjologiczna epifitycznych zespołów porostów Puszczy Knyszyńskiej. Badania terenowe i fitosocjologiczne wykonano na wszystkich gatunkach drzew występujących w puszczy. Analizę fitosocjologiczną przeprowadzono według zasad szkoły Braun- -Blanęueta, przystosowanych do badań porostów przez K le m e n ta (18) i B a rk m a n a (2). Stwierdzono występowanie 7 zespołów porostów epifitycznych: Chaenothecetum ferrugineae, Hypocenomycetum scalaris, Pertusarietum amarae, Pyrenuletum nitidae, Thelotremetum lepadini, Parmeliopsidetum ambiguae i Pseudevernietum furfuraceae. -
Molecular Phylogenetics of the Chytridiomycota Supports the Utility of Ultrastructural Data in Chytrid Systematics
Color profile: Disabled Composite Default screen 336 Molecular phylogenetics of the Chytridiomycota supports the utility of ultrastructural data in chytrid systematics Timothy Y. James, David Porter, Celeste A. Leander, Rytas Vilgalys, and Joyce E. Longcore Abstract: The chytrids (Chytridiomycota) are morphologically simple aquatic fungi that are unified by their possession of zoospores that typically have a single, posteriorly directed flagellum. This study addresses the systematics of the chytrids by generating a phylogeny of ribosomal DNA sequences coding for the small subunit gene of 54 chytrids, with emphasis on sampling the largest order, the Chytridiales. Selected chytrid sequences were also compared with se- quences from Zygomycota, Ascomycota, and Basidiomycota to derive an overall fungal phylogeny. These analyses show that the Chytridiomycota is probably not a monophyletic group; the Blastocladiales cluster with the Zygomycota. Analyses did not resolve relationships among chytrid orders, or among clades within the Chytridiales, which suggests that the divergence times of these groups may be ancient. Four clades were well supported within the Chytridiales, and each of these clades was coincident with a group previously identified by possession of a common subtype of zoospore ultrastructure. In contrast, the analyses revealed homoplasy in several developmental and zoosporangial characters. Key words: zoospore ultrastructure, Chytridiales, molecular phylogeny, Chytridiomycota, operculum. Résumé : Les chytrides (Chytridiomycota) sont des champignons aquatiques morphologiquement simples qui se carac- térisent par la présence de zoospores typiquement munies d’un unique flagelle dirigé vers l’arrière. Cette étude porte sur la systématique des chytrides en présentant une phylogénie basée sur les séquences de l’ADN ribosomale du gène codant pour la petite sous-unité, chez 54 chytrides, en mettant l’accent sur un échantillonage de l’ordre le plus impor- tant, les Chytridiales.