Elaphomyces Muricatus and Fischerula Macrospora, Two Interesting Hypogeous Fungi from Greece
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Abbildungsverzeichnis SZP / Index Des Illustrations Dans Le
Abbildungsverzeichnis SZP / Index des illustrations dans le BSM Stand / Date: 08.12.2020 zusammengestellt von/compilé par Hansueli Aeberhard (bis/jusqu'à 2017) und/et Nicolas Küffer VSVP/USSM Gattung / genre Art / espèce Autor / auteur Bildautor / photographe Bildart/type de l'illustration F=farbig/en couleur, sw=schwarzweiss/en noir et blancBeschreibung / descriptionSZP Seite / BSM page Abortiporus biennis (Bull.: Fr.) Singer Roth, J.-J. FT nein 92 / 2014.2 / 003 Abortiporus biennis (Bull.: Fr.) Singer Kellerhals, P. U. FT ja 92 / 2014.4 / 010 Acanthophiobolus helicosporus (Berk. & Broome) J. Walker Stäckli, E. FT nein 94 / 2016.4 / 023 Aeruginospora hiemalis Singer & Clémençon Clémençon, H. SW ja 49 / 1971 / 118 Agaricus aestivalis Gilgen, J. FT nein 97 / 2019.3 / 022 Agaricus arvensis Monti, J.-P. FT nein 97 / 2019.3 / 024 Agaricus augustus Monti, J.-P. FT nein 97 / 2019.3 / 025 Agaricus augustus Monti, J.-P., Danz M. FT nein 98 / 2020.1 / 026 Agaricus bisporus var. albidus Monti, J.-P. FT nein 97 / 2019.3 / 021 Agaricus bisporus var. bisporus Monti, J.-P. FT nein 97 / 2019.3 / 021 Agaricus bitorquis (Quél.) Sacc. Herrfurth, D. SW ja 11 / 1933 / 098 Agaricus bitorquis (Quél.) Sacc. Martinelli, G. FT nein 79 / 2001 / 146 Agaricus bitorquis Monti, J.-P. FT nein 97 / 2019.3 / 021 Agaricus bitorquis Delamadeleine, Y. FT nein 97 / 2019.3 / 022 Agaricus bitorquis Delamadeleine, Y. FT nein 96 / 2018.3 / 009 Agaricus campestris Monti, J.-P. FT nein 97 / 2019.3 / 020 Agaricus chionodermus Lucchini, G.-F. FT nein 97 / 2019.3 / 032 Agaricus essettei Essette FT nein 97 / 2019.3 / 025 Agaricus haemorrhoidarius Kalchbr. -
The Phylogeny of Plant and Animal Pathogens in the Ascomycota
Physiological and Molecular Plant Pathology (2001) 59, 165±187 doi:10.1006/pmpp.2001.0355, available online at http://www.idealibrary.com on MINI-REVIEW The phylogeny of plant and animal pathogens in the Ascomycota MARY L. BERBEE* Department of Botany, University of British Columbia, 6270 University Blvd, Vancouver, BC V6T 1Z4, Canada (Accepted for publication August 2001) What makes a fungus pathogenic? In this review, phylogenetic inference is used to speculate on the evolution of plant and animal pathogens in the fungal Phylum Ascomycota. A phylogeny is presented using 297 18S ribosomal DNA sequences from GenBank and it is shown that most known plant pathogens are concentrated in four classes in the Ascomycota. Animal pathogens are also concentrated, but in two ascomycete classes that contain few, if any, plant pathogens. Rather than appearing as a constant character of a class, the ability to cause disease in plants and animals was gained and lost repeatedly. The genes that code for some traits involved in pathogenicity or virulence have been cloned and characterized, and so the evolutionary relationships of a few of the genes for enzymes and toxins known to play roles in diseases were explored. In general, these genes are too narrowly distributed and too recent in origin to explain the broad patterns of origin of pathogens. Co-evolution could potentially be part of an explanation for phylogenetic patterns of pathogenesis. Robust phylogenies not only of the fungi, but also of host plants and animals are becoming available, allowing for critical analysis of the nature of co-evolutionary warfare. Host animals, particularly human hosts have had little obvious eect on fungal evolution and most cases of fungal disease in humans appear to represent an evolutionary dead end for the fungus. -
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pp. l'v1vcu/ogia, 102(5),2010, 1058-1065.001: 10.3852/09,232 by The Mycolog-icai Society of America, Lawrence, ( 2010 KS 66044-8897 Kalapuya brunnea gen. & sp. nov. and its relationship to the other sequestrate genera in Morchellaceae Matthew J. Trappe' it from Leucangium and other known genera. Here James M. Trappe we describe this genus and its only known species, co.',�s,tenH and Society, Oregon Kalapuya 1Yrunnea, and discuss its relationship with Oregon 97331,5752 other genera \\ithin the Morchellaceae. Gregory M. Bonito Department oj Biology, Duke Durham, MATERIALS AND y[ETHODS North Carolina 27708 Sections were prepared for light microscopy by hand and mounted in dH20, Melzer's reagent and cotton blue as well as by microtoming of paraffin-embedded specimens and Kalapuya is described as a new, monotypic Abstract: staining the thin sections in safranin-fast gTeen. All truffle genus in the Morchellaceae knovm only from microscopic measurements were made in dH20 mounts at the Pacific northwestern United States. Its relationship 400X or 1000X with a Zeiss GSL research microscope. to other hypogeous genera within Morchellaceae is Melzer's reagent was used to test for amyloid reactions and explored by phylogenetic analysis of the ribosomal LSU cotton blue for cyanescent reactions. EFlcx Glebal tissue samples were sequenced at the Institute for and protein coding region. The type species, K lxrunnea, occurs in Douglas-fir forests up to about 50 y Genome Sciences and Policy at Duke University. Clean old on the west slope of the Cascade Range in Oregon fungal tissue was removed from within sporocarps, placed in and in the Coastal Ranges of Oregon and northern microcentrifuge tubes and ground with micropestles. -
(<I>Morchella</I>) Species in the Elata Subclade
MYCOTAXON ISSN (print) 0093-4666 (online) 2154-8889 © 2016. Mycotaxon, Ltd. April–June 2016—Volume 131, pp. 467–482 http://dx.doi.org/10.5248/131.467 Four new morel (Morchella) species in the elata subclade (M. sect. Distantes) from Turkey Hatıra Taşkın1*, Hasan Hüseyİn Doğan2, Saadet Büyükalaca1, Philippe Clowez3, Pierre-Arthur Moreau4 & Kerry O’Donnell5 1Department of Horticulture, Faculty of Agriculture, University of Çukurova, Adana, 01330, Turkey 2Department of Biology, Faculty of Science, University of Selçuk, Konya, 42079, Turkey 356 place des Tilleuls, F-60400 Pont-l’Evêque, France 4 EA 4483, UFR Pharmacie, Université de Lille, F-59000 Lille cedex, France 5Mycotoxin Prevention and Applied Mycology Research Unit, National Center for Agricultural Utilization Research, US Department of Agriculture, Agricultural Research Service, 1815 North University Street, Peoria, Illinois 61604, USA * Correspondence to: [email protected] Abstract—Four Turkish Morchella species identified in published multilocus molecular phylogenetic analyses are described here as new, using detailed macro- and microscopic data: M. mediterraneensis (Mel-27), M. fekeensis (Mel-28), M. magnispora (Mel-29), and M. conifericola (Mel-32). A distribution map of morels identified to date in Turkey is also provided. Key words—Ascomycota, conservation, edible fungi, Morchellaceae, systematics, taxonomy Introduction True morels (Morchella), among the most highly prized edible macrofungi, are classified in the Morchellaceae (Pezizales, Ascomycota). This monophyletic family also includes Disciotis, Kalapuya, Fischerula, Imaia, Leucangium, and Verpa (O’Donnell et al. 1997, Trappe et al. 2010). Several multilocus DNA sequence-based analyses of Morchella that employed phylogenetic species recognition based on genealogical concordance (GCPSR sensu Taylor et al. 2000) have revealed that most species exhibit continental endemism and provincialism in the northern hemisphere (Du et al. -
Leucangium Microspermum: Re-Examination of Japanese L
Online publication; available at: http://jats-truffles.org/truffology/ Truffology 3 (1): –1 7 (2020) Original peer-reviewed article (原著論文 ; 査読有) Leucangium microspermum: Re-examination of Japanese L. carthusianum reveals its taxonomic novelty 日本産Leucangium carthusianum の再検討結果に基づく新種 L. microspermum の記載 Kohei Yamamoto1*, Hiromi Sasaki2, Muneyuki Ohmae3, Takamichi Orihara4 1* 2 3 4 山本 航平 , 佐々木廣海 , 大前 宗之 , 折原 貴道 1 Tochigi Prefectural Museum, 2-2 Mutsumi-cho, Utsunomiya-shi, Tochigi 320-0865, Japan 栃木県立博物館, 〒 320-0865 栃木県宇都宮市睦町 2-2 2 Mycologist Circle of Japan, Fujisawa-shi, Kanagawa, Japan 菌類懇話会, 神奈川県藤沢市 3 Hokken Co. Ltd., 7-3 Ekihigashimachi, Mibu-machi, Shimotsuga-gun, Tochigi 321-0222, Japan 株式会社北研, 〒 321-0222 栃木県下都賀郡壬生町駅東町 7-3 4 Kanagawa Prefectural Museum of Natural History, 499 Iryuda, Odawara-shi, Kanagawa 250-0031, Japan 神奈川県立生命の星 ・ 地球博物館, 〒 250-0031 神奈川県小田原市入生田 499 * Corresponding author (主著者) E-mail: [email protected] Abstract The genus Leucangium (Morchellaceae, Pezizales) is a truffle-like ascomycete that includes the type species L. carthusianum from Europe and North America, as well as a variety from China. Two specimens collected from subalpine conifer forests in Hokkaido in 2004 and 2011 are the only records of the genus in Japan. Since they were identified as L. carthusianum without detailed examination, in-depth morphological observation and phylogenetic analysis were necessary to confirm their taxonomic placement. In this study, we critically re- examined the Japanese specimens. Morphologically, the length of ascospores of the Japanese L. carthusianum was found to be much shorter than that indicated by the original descriptions of the type species and its variety. Phylogenetic analyses based on two nuclear ribosomal DNA regions showed significant genetic divergence between the Japanese specimens and other specimens of L. -
Duke University Dissertation Template
Systematics, Phylogeography and Ecology of Elaphomycetaceae by Hannah Theresa Reynolds Department of Biology Duke University Date:_______________________ Approved: ___________________________ Rytas Vilgalys, Supervisor ___________________________ Marc Cubeta ___________________________ Katia Koelle ___________________________ François Lutzoni ___________________________ Paul Manos Dissertation submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy in the Department of Biology in the Graduate School of Duke University 2011 iv ABSTRACTU Systematics, Phylogeography and Ecology of Elaphomycetaceae by Hannah Theresa Reynolds Department of Biology Duke University Date:_______________________ Approved: ___________________________ Rytas Vilgalys, Supervisor ___________________________ Marc Cubeta ___________________________ Katia Koelle ___________________________ François Lutzoni ___________________________ Paul Manos An abstract of a dissertation submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy in the Department of Biology in the Graduate School of Duke University 2011 Copyright by Hannah Theresa Reynolds 2011 Abstract This dissertation is an investigation of the systematics, phylogeography, and ecology of a globally distributed fungal family, the Elaphomycetaceae. In Chapter 1, we assess the literature on fungal phylogeography, reviewing large-scale phylogenetics studies and performing a meta-data analysis of fungal population genetics. In particular, we examined -
Kalapuya Brunnea Gen. & Sp. Nov. and Its Relationship to the Other Sequestrate Genera in Morchellaceae
Kalapuya brunnea gen. & sp. nov. and its relationship to the other sequestrate genera in Morchellaceae Trappe, M. J., Trappe, J. M., & Bonito, G. M. (2010). Kalapuya brunnea gen. & sp. nov. and its relationship to the other sequestrate genera in Morchellaceae. Mycologia, 102(5), 1058-1065. doi:10.3852/09-232 10.3852/09-232 Mycological Society of America Accepted Manuscript http://cdss.library.oregonstate.edu/sa-termsofuse 1 1 Kalapuya brunnea gen. & sp. nov. and its relationship to the other sequestrate genera in the 2 Morchellaceae 1 3 Matthew J. Trappe 4 James M. Trappe 5 Department of Forest Ecosystems and Society, Oregon State University, Corvallis, Oregon, 6 97331-5752, U.S.A. 7 Gregory M. Bonito 8 Department of Biology, Duke University, Durham, North Carolina, 27708, U.S.A. 9 Running Title: Kalapuya brunnea 10 Abstract: Kalapuya is described as a new, monotypic truffle genus in the Morchellaceae 11 known only from the Pacific Northwestern United States. Its relationship to other 12 hypogeous genera within the Morchellaceae is explored by phylogenetic analysis of the 13 LSU rDNA and EF1α protein coding genes. The type species, K. brunnea, occurs in 14 Douglas-fir forests up to about 50 yrs old on the west slope of the Cascade Mountains in 15 Oregon and in the Coast Ranges of Oregon and northern California. It has a roughened, 16 warty, reddish brown to brown peridium, a solid whitish gleba that develops grayish brown 17 mottling as the spores mature, and produces a cheesy-garlicky odor by maturity. Its 18 smooth, ellipsoid spores resemble those of Morchella spp. -
Complete References List
Aanen, D. K. & T. W. Kuyper (1999). Intercompatibility tests in the Hebeloma crustuliniforme complex in northwestern Europe. Mycologia 91: 783-795. Aanen, D. K., T. W. Kuyper, T. Boekhout & R. F. Hoekstra (2000). Phylogenetic relationships in the genus Hebeloma based on ITS1 and 2 sequences, with special emphasis on the Hebeloma crustuliniforme complex. Mycologia 92: 269-281. Aanen, D. K. & T. W. Kuyper (2004). A comparison of the application of a biological and phenetic species concept in the Hebeloma crustuliniforme complex within a phylogenetic framework. Persoonia 18: 285-316. Abbott, S. O. & Currah, R. S. (1997). The Helvellaceae: Systematic revision and occurrence in northern and northwestern North America. Mycotaxon 62: 1-125. Abesha, E., G. Caetano-Anollés & K. Høiland (2003). Population genetics and spatial structure of the fairy ring fungus Marasmius oreades in a Norwegian sand dune ecosystem. Mycologia 95: 1021-1031. Abraham, S. P. & A. R. Loeblich III (1995). Gymnopilus palmicola a lignicolous Basidiomycete, growing on the adventitious roots of the palm sabal palmetto in Texas. Principes 39: 84-88. Abrar, S., S. Swapna & M. Krishnappa (2012). Development and morphology of Lysurus cruciatus--an addition to the Indian mycobiota. Mycotaxon 122: 217-282. Accioly, T., R. H. S. F. Cruz, N. M. Assis, N. K. Ishikawa, K. Hosaka, M. P. Martín & I. G. Baseia (2018). Amazonian bird's nest fungi (Basidiomycota): Current knowledge and novelties on Cyathus species. Mycoscience 59: 331-342. Acharya, K., P. Pradhan, N. Chakraborty, A. K. Dutta, S. Saha, S. Sarkar & S. Giri (2010). Two species of Lysurus Fr.: addition to the macrofungi of West Bengal. -
Truffle Trouble: What Happened to the Tuberales?
mycological research 111 (2007) 1075–1099 journal homepage: www.elsevier.com/locate/mycres Truffle trouble: what happened to the Tuberales? Thomas LÆSSØEa,*, Karen HANSENb,y aDepartment of Biology, Copenhagen University, DK-1353 Copenhagen K, Denmark bHarvard University Herbaria – Farlow Herbarium of Cryptogamic Botany, Cambridge, MA 02138, USA article info abstract Article history: An overview of truffles (now considered to belong in the Pezizales, but formerly treated in Received 10 February 2006 the Tuberales) is presented, including a discussion on morphological and biological traits Received in revised form characterizing this form group. Accepted genera are listed and discussed according to a sys- 27 April 2007 tem based on molecular results combined with morphological characters. Phylogenetic Accepted 9 August 2007 analyses of LSU rDNA sequences from 55 hypogeous and 139 epigeous taxa of Pezizales Published online 25 August 2007 were performed to examine their relationships. Parsimony, ML, and Bayesian analyses of Corresponding Editor: Scott LaGreca these sequences indicate that the truffles studied represent at least 15 independent line- ages within the Pezizales. Sequences from hypogeous representatives referred to the fol- Keywords: lowing families and genera were analysed: Discinaceae–Morchellaceae (Fischerula, Hydnotrya, Ascomycota Leucangium), Helvellaceae (Balsamia and Barssia), Pezizaceae (Amylascus, Cazia, Eremiomyces, Helvellaceae Hydnotryopsis, Kaliharituber, Mattirolomyces, Pachyphloeus, Peziza, Ruhlandiella, Stephensia, Hypogeous Terfezia, and Tirmania), Pyronemataceae (Genea, Geopora, Paurocotylis, and Stephensia) and Pezizaceae Tuberaceae (Choiromyces, Dingleya, Labyrinthomyces, Reddellomyces, and Tuber). The different Pezizales types of hypogeous ascomata were found within most major evolutionary lines often nest- Pyronemataceae ing close to apothecial species. Although the Pezizaceae traditionally have been defined mainly on the presence of amyloid reactions of the ascus wall several truffles appear to have lost this character. -
High Diversity and Widespread Occurrence of Mitotic Spore Mats in Ectomycorrhizal Pezizales
Molecular Ecology (2013) 22, 1717–1732 doi: 10.1111/mec.12135 High diversity and widespread occurrence of mitotic spore mats in ectomycorrhizal Pezizales R. A. HEALY,* M. E. SMITH,† G. M. BONITO,‡ D. H. PFISTER,§ Z. -W. GE,†¶ G. G. GUEVARA,** G. WILLIAMS,‡ K. STAFFORD,‡ L. KUMAR,* T. LEE,* C. HOBART,†† J. TRAPPE,‡‡ R. VILGALYS‡ and D. J. MCLAUGHLIN* *Department of Plant Biology, University of Minnesota, St. Paul, MN 55108, USA, †Department of Plant Pathology, University of Florida, Gainesville, FL 32611-0680, USA, ‡Department of Biology, Duke University, Durham, NC 27708, USA, §Farlow Herbarium of Cryptogamic Botany, Harvard University, Cambridge, MA 02143, USA, ¶Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650204, China, **Instituto Tecnologico de Cd. Victoria, Tamaulipas 87010, Mexico, ††University of Sheffield, Sheffield, UK, ‡‡Department of Forest Ecosystems and Society, Oregon State University, Corvalis 97331-2106, OR, USA Abstract Fungal mitospores may function as dispersal units and/ or spermatia and thus play a role in distribution and/or mating of species that produce them. Mitospore production in ectomycorrhizal (EcM) Pezizales is rarely reported, but here we document mitospore production by a high diversity of EcM Pezizales on three continents, in both hemi- spheres. We sequenced the internal transcribed spacer (ITS) and partial large subunit (LSU) nuclear rDNA from 292 spore mats (visible mitospore clumps) collected in Argentina, Chile, China, Mexico and the USA between 2009 and 2012. We collated spore mat ITS sequences with 105 fruit body and 47 EcM root sequences to generate operational taxonomic units (OTUs). Phylogenetic inferences were made through anal- yses of both molecular data sets. -
Systematics of the Pezizomycetes—The Operculate Discomycetes
Mycologia, 98(6), 2006, pp. 1029–1040. # 2006 by The Mycological Society of America, Lawrence, KS 66044-8897 Systematics of the Pezizomycetes—the operculate discomycetes K. Hansen1,2 Key words: classification, LSU rDNA, SSU rDNA, D.H. Pfister subordinal groupings Harvard University Herbaria, Cambridge, Massachusetts 02138 INTRODUCTION The Pezizales, the only order of the Pezizomycetes, is Abstract: The Pezizomycetes (order Pezizales) is an characterized by asci that generally open by rupturing early diverging lineage within the Pezizomycotina. A to form a terminal or eccentric lid or operculum. The shared derived character, the operculate ascus, ascomata are apothecia or are closed structures of supports the Pezizales as monophyletic, although various forms that are derived from apothecia. functional opercula have been lost in certain taxa. Apothecia range in size from less than a millimeter Phylogenetic relationships within Pezizales were to ca. 15 cm and may be sessile or stalked (FIG. 1). studied using parsimony and Bayesian analyses of The order includes epigeous, semihypogeous to partial SSU and LSU rDNA sequences from 100 taxa hypogeous (truffles) taxa. The ascospores are single- representing 82 genera and 13 of the 15 families celled, bipolar symmetrical, and usually bilaterally currently recognized. Three primary lineages are symmetrical, ranging from globose to ellipsoidal or identified that more or less correspond to the A, B occasionally fusoid. Some ascospores develop surface and C lineages resolved in previous analyses using ornamentations in the form of warts, ridges or spines. SSU rDNA: (A) Ascobolaceae and Pezizaceae; (B) The tissues of the ascomata are fleshy and often Discinaceae-Morchellaceae and Helvellaceae-Tubera- fragile. -
Diversity, Ecology, and Conservation of Truffle Fungi in Forests of the Pacific Northwest
United States Department of Agriculture Diversity, Ecology, and Forest Service Conservation of Truffle Pacific Northwest Research Station Fungi in Forests of the General Technical Report PNW-GTR-772 April 2009 Pacific Northwest James M. Trappe, Randy Molina, Daniel L. Luoma, D E E P R A U R T LT MENT OF AGRICU Efren Cázares, David Pilz, Jane E. Smith, Michael A. Castellano, Steven L. Miller, and Matthew J. Trappe Authors James M. Trappe is a professor, Department of Forest Science, Oregon State University, 321 Richardson Hall, Corvallis, OR 97331; he prepared sections on history of truffle science in the Pacific Northwest (PNW), evolution, and diversity of truffles. Randy Molina is a research botanist (retired), U.S. Department of Agriculture, Forest Service, Pacific Northwest Research Station, Forestry Sciences Laboratory, 629 SW Main, Suite 400, Portland, OR 97205; he prepared sections on introductory concepts, mycorrhizal symbiosis and specificity, fungal rarity, management principles, and historical contributions of James Trappe to truffle science in the PNW. Daniel L. Luoma is an assistant professor, Department of Forest Science, Oregon State University, 321 Richardson Hall, Corvallis, OR 97331; he prepared sections on community ecology, mycophagy, silvicultural effects, and inventory methods. Efren Cázares is an affiliate faculty member, Department of Forest Science, Oregon State University, 321 Richardson Hall, Corvallis, OR 97331; he prepared sections on genera descriptions. David Pilz is an affiliate faculty member, Department of Forest Science, Oregon State University, 321 Richardson Hall, Corvallis, OR 97331; he prepared sections on culinary truffles. Jane E. Smith is a research botanist and Michael Castellano is a research forester, U.S.