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Outline of Angiosperm Phylogeny
Outline of angiosperm phylogeny: orders, families, and representative genera with emphasis on Oregon native plants Priscilla Spears December 2013 The following listing gives an introduction to the phylogenetic classification of the flowering plants that has emerged in recent decades, and which is based on nucleic acid sequences as well as morphological and developmental data. This listing emphasizes temperate families of the Northern Hemisphere and is meant as an overview with examples of Oregon native plants. It includes many exotic genera that are grown in Oregon as ornamentals plus other plants of interest worldwide. The genera that are Oregon natives are printed in a blue font. Genera that are exotics are shown in black, however genera in blue may also contain non-native species. Names separated by a slash are alternatives or else the nomenclature is in flux. When several genera have the same common name, the names are separated by commas. The order of the family names is from the linear listing of families in the APG III report. For further information, see the references on the last page. Basal Angiosperms (ANITA grade) Amborellales Amborellaceae, sole family, the earliest branch of flowering plants, a shrub native to New Caledonia – Amborella Nymphaeales Hydatellaceae – aquatics from Australasia, previously classified as a grass Cabombaceae (water shield – Brasenia, fanwort – Cabomba) Nymphaeaceae (water lilies – Nymphaea; pond lilies – Nuphar) Austrobaileyales Schisandraceae (wild sarsaparilla, star vine – Schisandra; Japanese -
Transline Infrastructure Corridor Vegetation and Flora Survey
TROPICANA GOLD PROJECT Tropicana – Transline Infrastructure Corridor Vegetation and Flora Survey 025 Wellington Street WEST PERTH WA 6005 phone: 9322 1944 fax: 9322 1599 ACN 088 821 425 ABN 63 088 821 425 www.ecologia.com.au Tropicana Gold Project Tropicana Joint Venture Tropicana-Transline Infrastructure Corridor: Vegetation and Flora Survey July 2009 Tropicana Gold Project Tropicana-Transline Infrastructure Corridor Flora and Vegetation Survey © ecologia Environment (2009). Reproduction of this report in whole or in part by electronic, mechanical or chemical means, including photocopying, recording or by any information storage and retrieval system, in any language, is strictly prohibited without the express approval of ecologia Environment and/or AngloGold Ashanti Australia. Restrictions on Use This report has been prepared specifically for AngloGold Ashanti Australia. Neither the report nor its contents may be referred to or quoted in any statement, study, report, application, prospectus, loan, or other agreement document, without the express approval of ecologia Environment and/or AngloGold Ashanti Australia. ecologia Environment 1025 Wellington St West Perth WA 6005 Ph: 08 9322 1944 Fax: 08 9322 1599 Email: [email protected] i Tropicana Gold Project Tropicana-Transline Infrastructure Corridor Flora and Vegetation Survey Executive Summary The Tropicana JV (TJV) is currently undertaking pre-feasibility studies on the viability of establishing the Tropicana Gold Project (TGP), which is centred on the Tropicana and Havana gold prospects. The proposed TGP is located approximately 330 km east north-east of Kalgoorlie, and 15 km west of the Plumridge Lakes Nature Reserve, on the western edge of the Great Victoria Desert (GVD) biogeographic region of Western Australia. -
"Preserve Analysis : Saddle Mountain"
PRESERVE ANALYSIS: SADDLE MOUNTAIN Pre pare d by PAUL B. ALABACK ROB ERT E. FRENKE L OREGON NATURAL AREA PRESERVES ADVISORY COMMITTEE to the STATE LAND BOARD Salem. Oregon October, 1978 NATURAL AREA PRESERVES ADVISORY COMMITTEE to the STATE LAND BOARD Robert Straub Nonna Paul us Governor Clay Myers Secretary of State State Treasurer Members Robert Frenkel (Chairman), Corvallis Bill Burley (Vice Chainnan), Siletz Charles Collins, Roseburg Bruce Nolf, Bend Patricia Harris, Eugene Jean L. Siddall, Lake Oswego Ex-Officio Members Bob Maben Wi 11 i am S. Phe 1ps Department of Fish and Wildlife State Forestry Department Peter Bond J. Morris Johnson State Parks and Recreation Branch State System of Higher Education PRESERVE ANALYSIS: SADDLE MOUNTAIN prepared by Paul B. Alaback and Robert E. Frenkel Oregon Natural Area Preserves Advisory Committee to the State Land Board Salem, Oregon October, 1978 ----------- ------- iii PREFACE The purpose of this preserve analysis is to assemble and document the significant natural values of Saddle Mountain State Park to aid in deciding whether to recommend the dedication of a portion of Saddle r10untain State Park as a natural area preserve within the Oregon System of I~atural Areas. Preserve management, agency agreements, and manage ment planning are therefore not a function of this document. Because of the outstanding assemblage of wildflowers, many of which are rare, Saddle r·1ountain has long been a mecca for· botanists. It was from Oregon's botanists that the Committee initially received its first documentation of the natural area values of Saddle Mountain. Several Committee members and others contributed to the report through survey and documentation. -
Cactus (Opuntia Spp.) As Forage 169
Cactus (Opuntia spp.) as forage 169 Food •••A.gricultv,.. Org•nU.taon or United -N••lon• FAO Cactus (Opuntiaspp.) PLANT PRODUCTION as forage AND PROTECTlON PAPER 169 Ed~ed by Candelario Mondragon-Jacobo lnstituto Nacional de Investigaciones Forestales y Agropecuarias (INIFAP) Mexico and Salvador Perez-Gonzalez Universidad Aut6noma de Queretaro Mexico Coordinated for FAD by Enrique Arias Horticultural Crops Group Stephen G. Reynolds Grassland and Pasture Crops Group FAO Plant Production and Protection Division and Manuel D. sanchez Feed Resources Group FAO Animal Production and HeaHh Division Produced within the frameworl< of the FAO International Technical Cooperation Networl< ot on Cactus Pear ••u nttttd• NaUon• Rome,2001 Reprinted 2002 The designations “developed” and “developing” economies are intended for statistical convenience and do not necessarily express a judgement about the stage reached by a particular country, country territory or area in the development process. The views expressed herein are those of the authors and do not necessarily represent those of the Food and Agriculture Organization of the United Nations or of their affiliated organization(s). The designations employed and the presentation of material in this information product do not imply the expression of any opinion whatsoever on the part of the Food and Agriculture Organization of the United Nations concerning the legal status of any country, territory, city or area or of its authorities, or concerning the delimitation of its frontiers or boundaries. ISBN 92-5-104705-7 All rights reserved. Reproduction and dissemination of material in this information product for educational or other non-commercial purposes are authorized without any prior written permission from the copyright holders provided the source is fully acknowledged. -
Evaluating the Monophyly and Biogeography of Cryptantha (Boraginaceae)
Systematic Botany (2018), 43(1): pp. 53–76 © Copyright 2018 by the American Society of Plant Taxonomists DOI 10.1600/036364418X696978 Date of publication April 18, 2018 Evaluating the Monophyly and Biogeography of Cryptantha (Boraginaceae) Makenzie E. Mabry1,2 and Michael G. Simpson1 1Department of Biology, San Diego State University, San Diego, California 92182, U. S. A. 2Current address: Division of Biological Sciences and Bond Life Sciences Center, University of Missouri, Columbia, Missouri 65211, U. S. A. Authors for correspondence ([email protected]; [email protected]) Abstract—Cryptantha, an herbaceous plant genus of the Boraginaceae, subtribe Amsinckiinae, has an American amphitropical disjunct distri- bution, found in western North America and western South America, but not in the intervening tropics. In a previous study, Cryptantha was found to be polyphyletic and was split into five genera, including a weakly supported, potentially non-monophyletic Cryptantha s. s. In this and subsequent studies of the Amsinckiinae, interrelationships within Cryptantha were generally not strongly supported and sample size was generally low. Here we analyze a greatly increased sampling of Cryptantha taxa using high-throughput, genome skimming data, in which we obtained the complete ribosomal cistron, the nearly complete chloroplast genome, and twenty-three mitochondrial genes. Our analyses have allowed for inference of clades within this complex with strong support. The occurrence of a non-monophyletic Cryptantha is confirmed, with three major clades obtained, termed here the Johnstonella/Albidae clade, the Maritimae clade, and a large Cryptantha core clade, each strongly supported as monophyletic. From these phylogenomic analyses, we assess the classification, character evolution, and phylogeographic history that elucidates the current amphitropical distribution of the group. -
COSEWIC Assessment and Status Report on the Tiny Cryptantha Cryptantha Minima in Canada
COSEWIC Assessment and Status Report on the Tiny Cryptantha Cryptantha minima in Canada THREATENED 2012 COSEWIC status reports are working documents used in assigning the status of wildlife species suspected of being at risk. This report may be cited as follows: COSEWIC. 2012. COSEWIC assessment and status report on the Tiny Cryptantha Cryptantha minima in Canada. Committee on the Status of Endangered Wildlife in Canada. Ottawa. x + 37 pp. (www.registrelep-sararegistry.gc.ca/default_e.cfm). Previous report(s): COSEWIC. 2000. COSEWIC assessment and status report on the tiny cryptanthe Cryptantha minima in Canada. Committee on the Status of Endangered Wildlife in Canada. Ottawa. vi + 18 pp. Smith, B. 1998. COSEWIC status report on the tiny cryptanthe Cryptantha minima in Canada, in COSEWIC assessment and status report on the tiny cryptanthe Cryptantha minima in Canada. Committee on the Status of Endangered Wildlife in Canada. Ottawa. 1-18 pp. Production note: COSEWIC would like to acknowledge Sue Michalsky for writing the status report on the Tiny Cryptantha Cryptantha minima in Canada, prepared under contract with Environment Canada. This report was overseen and edited by Bruce Bennett and Erich Haber, Co-chairs of the COSEWIC Vascular Plants Specialist Subcommittee. For additional copies contact: COSEWIC Secretariat c/o Canadian Wildlife Service Environment Canada Ottawa, ON K1A 0H3 Tel.: 819-953-3215 Fax: 819-994-3684 E-mail: COSEWIC/[email protected] http://www.cosewic.gc.ca Également disponible en français sous le titre Ếvaluation et Rapport de situation du COSEPAC sur la Cryptanthe minuscule (Cryptantha minima) au Canada. Cover illustration/photo: Tiny Cryptantha — Source: Environment Canada 2010. -
Evolution of Flowering Time in the Tetraploid Capsella Bursa-Pastoris (Brassicaceae)
Digital Comprehensive Summaries of Uppsala Dissertations from the Faculty of Science and Technology 367 Evolution of Flowering Time in the Tetraploid Capsella bursa-pastoris (Brassicaceae) TANJA SLOTTE ACTA UNIVERSITATIS UPSALIENSIS ISSN 1651-6214 UPPSALA ISBN 978-91-554-7024-1 2007 urn:nbn:se:uu:diva-8311 ! " #$$" $%$$ & & & ' ( ) * ( + )( #$$"( & ! * ) ) ,-( . ( /0"( 1$ ( ( 2+ 3" 4345514"$#14( . 6 & &* & * ( 2 2 & & * * & * & ( ! * & ( . 7 & * . * & & & & & * ( & & * & * 8 & ( ) & & * * ( . 4 4& * && * * && & * ( + * 9) ,9 ) - & & * : ( ) !"!#$% ,%- & 9) &!'$()* &! ,&- * & * ( && & * & * & ; ( ) % & * & && & * ( 2 8 & & * +, - & * 8 9) . / $ / * / $ * / ) %0/ / $ 12345 / , < ) 6 + #$$" 2++ 0540#1 2+ 3" 4345514"$#14 % %%% 4 / , %== (:(= > ? % %%% 4 /- looking carefully, a shepherd’s purse is blooming under the fence Bash List of papers This thesis is based on the following papers, which are referred to by their Roman numerals: I Slotte, T., Ceplitis, A., Neuffer, B., Hurka, H., and M. Lascoux. 2006. Intrageneric phylogeny of Capsella (Brassicaceae) and the -
Phylogenetic Position and Generic Limits of Arabidopsis (Brassicaceae)
PHYLOGENETIC POSITION Steve L. O'Kane, Jr.2 and Ihsan A. 3 AND GENERIC LIMITS OF Al-Shehbaz ARABIDOPSIS (BRASSICACEAE) BASED ON SEQUENCES OF NUCLEAR RIBOSOMAL DNA1 ABSTRACT The primary goals of this study were to assess the generic limits and monophyly of Arabidopsis and to investigate its relationships to related taxa in the family Brassicaceae. Sequences of the internal transcribed spacer region (ITS-1 and ITS-2) of nuclear ribosomal DNA, including 5.8S rDNA, were used in maximum parsimony analyses to construct phylogenetic trees. An attempt was made to include all species currently or recently included in Arabidopsis, as well as species suggested to be close relatives. Our ®ndings show that Arabidopsis, as traditionally recognized, is polyphyletic. The genus, as recircumscribed based on our results, (1) now includes species previously placed in Cardaminopsis and Hylandra as well as three species of Arabis and (2) excludes species now placed in Crucihimalaya, Beringia, Olimar- abidopsis, Pseudoarabidopsis, and Ianhedgea. Key words: Arabidopsis, Arabis, Beringia, Brassicaceae, Crucihimalaya, ITS phylogeny, Olimarabidopsis, Pseudoar- abidopsis. Arabidopsis thaliana (L.) Heynh. was ®rst rec- netic studies and has played a major role in un- ommended as a model plant for experimental ge- derstanding the various biological processes in netics over a half century ago (Laibach, 1943). In higher plants (see references in Somerville & Mey- recent years, many biologists worldwide have fo- erowitz, 2002). The intraspeci®c phylogeny of A. cused their research on this plant. As indicated by thaliana has been examined by Vander Zwan et al. Patrusky (1991), the widespread acceptance of A. (2000). Despite the acceptance of A. -
(Dr. Sc. Nat.) Vorgelegt Der Mathematisch-Naturwissenschaftl
Zurich Open Repository and Archive University of Zurich Main Library Strickhofstrasse 39 CH-8057 Zurich www.zora.uzh.ch Year: 2012 Flowers, sex, and diversity: Reproductive-ecological and macro-evolutionary aspects of floral variation in the Primrose family, Primulaceae de Vos, Jurriaan Michiel Posted at the Zurich Open Repository and Archive, University of Zurich ZORA URL: https://doi.org/10.5167/uzh-88785 Dissertation Originally published at: de Vos, Jurriaan Michiel. Flowers, sex, and diversity: Reproductive-ecological and macro-evolutionary aspects of floral variation in the Primrose family, Primulaceae. 2012, University of Zurich, Facultyof Science. FLOWERS, SEX, AND DIVERSITY. REPRODUCTIVE-ECOLOGICAL AND MACRO-EVOLUTIONARY ASPECTS OF FLORAL VARIATION IN THE PRIMROSE FAMILY, PRIMULACEAE Dissertation zur Erlangung der naturwissenschaftlichen Doktorwürde (Dr. sc. nat.) vorgelegt der Mathematisch-naturwissenschaftliche Fakultät der Universität Zürich von Jurriaan Michiel de Vos aus den Niederlanden Promotionskomitee Prof. Dr. Elena Conti (Vorsitz) Prof. Dr. Antony B. Wilson Dr. Colin E. Hughes Zürich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s ist ein zentrales Ziel in der Evolutionsbiologie, die Muster der Vielfalt und die Prozesse, die sie erzeugen, zu verstehen. -
Kenai National Wildlife Refuge Species List, Version 2018-07-24
Kenai National Wildlife Refuge Species List, version 2018-07-24 Kenai National Wildlife Refuge biology staff July 24, 2018 2 Cover image: map of 16,213 georeferenced occurrence records included in the checklist. Contents Contents 3 Introduction 5 Purpose............................................................ 5 About the list......................................................... 5 Acknowledgments....................................................... 5 Native species 7 Vertebrates .......................................................... 7 Invertebrates ......................................................... 55 Vascular Plants........................................................ 91 Bryophytes ..........................................................164 Other Plants .........................................................171 Chromista...........................................................171 Fungi .............................................................173 Protozoans ..........................................................186 Non-native species 187 Vertebrates ..........................................................187 Invertebrates .........................................................187 Vascular Plants........................................................190 Extirpated species 207 Vertebrates ..........................................................207 Vascular Plants........................................................207 Change log 211 References 213 Index 215 3 Introduction Purpose to avoid implying -
Phylogenetic Taxonomy of Artemisia L. Species from Kazakhstan Based On
PROCEEDINGS OF THE LATVIAN ACADEMY OF SCIENCES. Section B, Vol. 72 (2018), No. 1 (712), pp. 29–37. DOI: 10.1515/prolas-2017-0068 PHYLOGENETIC TAXONOMY OF ARTEMISIA L. SPECIES FROM KAZAKHSTAN BASED ON MATK ANALYSES Yerlan Turuspekov1,5, Yuliya Genievskaya1, Aida Baibulatova1, Alibek Zatybekov1, Yuri Kotuhov2, Margarita Ishmuratova3, Akzhunis Imanbayeva4, and Saule Abugalieva1,5,# 1 Institute of Plant Biology and Biotechnology, 45 Timiryazev Street, Almaty, KAZAKHSTAN 2 Altai Botanical Garden, Ridder, KAZAKHSTAN 3 Karaganda State University, Karaganda, KAZAKHSTAN 4 Mangyshlak Experimental Botanical Garden, Aktau, KAZAKHSTAN 5 Al-Farabi Kazakh National University, Biodiversity and Bioresources Department, Almaty, KAZAKHSTAN # Corresponding author, [email protected] Communicated by Isaak Rashal The genus Artemisia is one of the largest of the Asteraceae family. It is abundant and diverse, with complex taxonomic relations. In order to expand the knowledge about the classification of Kazakhstan species and compare it with classical studies, matK genes of nine local species in- cluding endemic were sequenced. The infrageneric rank of one of them (A. kotuchovii) had re- mained unknown. In this study, we analysed results of sequences using two methods — NJ and MP and compared them with a median-joining haplotype network. As a result, monophyletic origin of the genus and subgenus Dracunculus was confirmed. Closeness of A. kotuchovii to other spe- cies of Dracunculus suggests its belonging to this subgenus. Generally, matK was shown as a useful barcode marker for the identification and investigation of Artemisia genus. Key words: Artemisia, Artemisia kotuchovii, DNA barcoding, haplotype network. INTRODUCTION (Bremer, 1994; Torrel et al., 1999). Due to the large amount of species in the genus, their classification is still complex Artemisia of the family Asteraceae is a genus with great and not fully completed. -
Arctic National Wildlife Refuge Volume 2
Appendix F Species List Appendix F: Species List F. Species List F.1 Lists The following list and three tables denote the bird, mammal, fish, and plant species known to occur in Arctic National Wildlife Refuge (Arctic Refuge, Refuge). F.1.1 Birds of Arctic Refuge A total of 201 bird species have been recorded on Arctic Refuge. This list describes their status and abundance. Many birds migrate outside of the Refuge in the winter, so unless otherwise noted, the information is for spring, summer, or fall. Bird names and taxonomic classification follow American Ornithologists' Union (1998). F.1.1.1 Definitions of classifications used Regions of the Refuge . Coastal Plain – The area between the coast and the Brooks Range. This area is sometimes split into coastal areas (lagoons, barrier islands, and Beaufort Sea) and inland areas (uplands near the foothills of the Brooks Range). Brooks Range – The mountains, valleys, and foothills north and south of the Continental Divide. South Side – The foothills, taiga, and boreal forest south of the Brooks Range. Status . Permanent Resident – Present throughout the year and breeds in the area. Summer Resident – Only present from May to September. Migrant – Travels through on the way to wintering or breeding areas. Breeder – Documented as a breeding species. Visitor – Present as a non-breeding species. * – Not documented. Abundance . Abundant – Very numerous in suitable habitats. Common – Very likely to be seen or heard in suitable habitats. Fairly Common – Numerous but not always present in suitable habitats. Uncommon – Occurs regularly but not always observed because of lower abundance or secretive behaviors.