Nomination Background: Dihydroxyacetone (CASRN: 96-26-4)
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Modelling Panspermia in the TRAPPIST-1 System
October 13, 2017 Modelling panspermia in the TRAPPIST-1 system James A. Blake1,2*, David J. Armstrong1,2, Dimitri Veras1,2 Abstract The recent ground-breaking discovery of seven temperate planets within the TRAPPIST-1 system has been hailed as a milestone in the development of exoplanetary science. Centred on an ultra-cool dwarf star, the planets all orbit within a sixth of the distance from Mercury to the Sun. This remarkably compact nature makes the system an ideal testbed for the modelling of rapid lithopanspermia, the idea that micro-organisms can be distributed throughout the Universe via fragments of rock ejected during a meteoric impact event. We perform N-body simulations to investigate the timescale and success-rate of lithopanspermia within TRAPPIST-1. In each simulation, test particles are ejected from one of the three planets thought to lie within the so-called ‘habitable zone’ of the star into a range of allowed orbits, constrained by the ejection velocity and coplanarity of the case in question. The irradiance received by the test particles is tracked throughout the simulation, allowing the overall radiant exposure to be calculated for each one at the close of its journey. A simultaneous in-depth review of space microbiological literature has enabled inferences to be made regarding the potential survivability of lithopanspermia in compact exoplanetary systems. 1Department of Physics, University of Warwick, Coventry, CV4 7AL 2Centre for Exoplanets and Habitability, University of Warwick, Coventry, CV4 7AL *Corresponding author: [email protected] Contents Universe, and can propagate from one location to another. This interpretation owes itself predominantly to the works of William 1 Introduction1 Thompson (Lord Kelvin) and Hermann von Helmholtz in the 1.1 Mechanisms for panspermia...............2 latter half of the 19th Century. -
Prebiological Evolution and the Metabolic Origins of Life
Prebiological Evolution and the Andrew J. Pratt* Metabolic Origins of Life University of Canterbury Keywords Abiogenesis, origin of life, metabolism, hydrothermal, iron Abstract The chemoton model of cells posits three subsystems: metabolism, compartmentalization, and information. A specific model for the prebiological evolution of a reproducing system with rudimentary versions of these three interdependent subsystems is presented. This is based on the initial emergence and reproduction of autocatalytic networks in hydrothermal microcompartments containing iron sulfide. The driving force for life was catalysis of the dissipation of the intrinsic redox gradient of the planet. The codependence of life on iron and phosphate provides chemical constraints on the ordering of prebiological evolution. The initial protometabolism was based on positive feedback loops associated with in situ carbon fixation in which the initial protometabolites modified the catalytic capacity and mobility of metal-based catalysts, especially iron-sulfur centers. A number of selection mechanisms, including catalytic efficiency and specificity, hydrolytic stability, and selective solubilization, are proposed as key determinants for autocatalytic reproduction exploited in protometabolic evolution. This evolutionary process led from autocatalytic networks within preexisting compartments to discrete, reproducing, mobile vesicular protocells with the capacity to use soluble sugar phosphates and hence the opportunity to develop nucleic acids. Fidelity of information transfer in the reproduction of these increasingly complex autocatalytic networks is a key selection pressure in prebiological evolution that eventually leads to the selection of nucleic acids as a digital information subsystem and hence the emergence of fully functional chemotons capable of Darwinian evolution. 1 Introduction: Chemoton Subsystems and Evolutionary Pathways Living cells are autocatalytic entities that harness redox energy via the selective catalysis of biochemical transformations. -
Inhibition of Neuroinflammatory Nitric Oxide Signaling Suppresses Glycation and Prevents Neuronal Dysfunction in Mouse Prion Disease
Inhibition of neuroinflammatory nitric oxide signaling suppresses glycation and prevents neuronal dysfunction in mouse prion disease Julie-Myrtille Bourgognona, Jereme G. Spiersb, Sue W. Robinsonc, Hannah Scheiblichd, Paul Glynnc, Catharine Ortorie, Sophie J. Bradleyf, Andrew B. Tobinf, and Joern R. Steinertg,1 aCentre for Immunobiology, University of Glasgow, Glasgow, G12 8TA, United Kingdom; bDepartment of Biochemistry and Genetics, La Trobe Institute for Molecular Science, La Trobe University, VIC 3083, Melbourne, Australia; cMedical Research Council Toxicology Unit, University of Leicester, Leicester, LE1 9HN, United Kingdom; dDepartment of Neurodegenerative Disease and Geriatric Psychiatry/Neurology, University of Bonn, Bonn 53127, Germany; eSchool of Pharmacy, University of Nottingham, Nottingham NG7 2RD, United Kingdom; fCentre for Translational Pharmacology, Veterinary and Life Sciences, University of Glasgow, Glasgow, G12 8QQ, United Kingdom; and gSchool of Life Sciences, Queen’s Medical Centre, University of Nottingham, Nottingham, NG7 2UH, United Kingdom Edited by Juan Carlos Saez, University of Valparaiso, Valparaiso, Chile, and approved January 22, 2021 (received for review May 14, 2020) Several neurodegenerative diseases associated with protein mis- system where it is synthesized by NO synthases (neuronal NOS folding (Alzheimer’s and Parkinson’s disease) exhibit oxidative and [nNOS], inducible NOS [iNOS], and endothelial NOS [eNOS]). nitrergic stress following initiation of neuroinflammatory path- Excessive NO production -
Chemical Evolution Theory of Life's Origins the Lattimer, AST 248, Lecture 13 – P.2/20 Organics
Chemical Evolution Theory of Life's Origins 1. the synthesis and accumulation of small organic molecules, or monomers, such as amino acids and nucleotides. • Production of glycine (an amino acid) energy 3HCN+2H2O −→ C2H5O2N+CN2H2. • Production of adenine (a base): 5 HCN → C5H5N5, • Production of ribose (a sugar): 5H2CO → C5H10O5. 2. the joining of these monomers into polymers, including proteins and nucleic acids. Bernal showed that clay-like materials could serve as sites for polymerization. 3. the concentration of these molecules into droplets, called protobionts, that had chemical characteristics different from their surroundings. This relies heavily on the formation of a semi-permeable membrane, one that allows only certain materials to flow one way or the other through it. Droplet formation requires a liquid with a large surface tension, such as water. Membrane formation naturally occurs if phospholipids are present. 4. The origin of heredity, or a means of relatively error-free reproduction. It is widely, but not universally, believed that RNA-like molecules were the first self-replicators — the RNA world hypothesis. They may have been preceded by inorganic self-replicators. Lattimer, AST 248, Lecture 13 – p.1/20 Acquisition of Organic Material and Water • In the standard model of the formatio of the solar system, volatile materials are concentrated in the outer solar system. Although there is as much carbon as nearly all other heavy elements combined in the Sun and the bulk of the solar nebula, the high temperatures in the inner solar system have lead to fractional amounts of C of 10−3 of the average. -
The Pichia Pastoris Dihydroxyacetone Kinase Is a PTS1-Containing, but Cytosolic, Protein That Is Essential for Growth on Methanol
. 14: 759–771 (1998) The Pichia pastoris Dihydroxyacetone Kinase is a PTS1-containing, but Cytosolic, Protein that is Essential for Growth on Methanol GEORG H. LU} ERS†, RAJ ADVANI, THIBAUT WENZEL AND SURESH SUBRAMANI* Department of Biology, University of California at San Diego, La Jolla, California 92093–0322, U.S.A. Received 11 November 1997; accepted 27 January 1998 Dihydroxyacetone kinase (DAK) is essential for methanol assimilation in methylotrophic yeasts. We have cloned the DAK gene from Pichia pastoris by functional complementation of a mutant that was unable to grow on methanol. An open reading frame of 1824 bp was identified that encodes a 65·3 kDa protein with high homology to DAK from Saccharomyces cerevisiae. Although DAK from P. pastoris contained a C-terminal tripeptide, TKL, which we showed can act as a peroxisomal targeting signal when fused to the green fluorescent protein, the enzyme was primarily cytosolic. The TKL tripeptide was not required for the biochemical function of DAK because a deletion construct lacking the DNA encoding this tripeptide was able to complement the P. pastoris dakÄ mutant. Peroxisomes, which are essential for growth of P. pastoris on methanol, were present in the dakÄ mutant and the import of peroxisomal proteins was not disturbed. The dakÄ mutant grew at normal rates on glycerol and oleate media. However, unlike the wild-type cells, the dakÄ mutant was unable to grow on methanol as the sole carbon source but was able to grow on dihydroxyacetone at a much slower rate. The metabolic pathway explaining the reduced growth rate of the dakÄ mutant on dihydroxyacetone is discussed. -
Matrix Scientific PO BOX 25067 COLUMBIA, SC 29224-5067 Telephone: 803-788-9494 Fax: 803-788-9419 SAFETY DATA SHEET Transportation Emergency: 3E Co
Matrix Scientific PO BOX 25067 COLUMBIA, SC 29224-5067 Telephone: 803-788-9494 Fax: 803-788-9419 SAFETY DATA SHEET Transportation Emergency: 3E Co. (5025) 800-451-8346 1. Product Identification Name 1,3-Dihydroxyacetone Catalog Number 119322 CAS Registry Number [96-26-4] Company Matrix Scientific Physical Address 131 Pontiac Business Center Drive Elgin, SC 29045 USA Telephone/Fax (803)788-9494/(803)788-9419 2. Hazard Identification Hazardous Ingredients 1,3-Dihydroxyacetone GHS label elements, including precautionary statements Pictogram Signal word WARNING Hazard statement(s) H317 H317 May cause an allergic skin reaction H319 H319 Causes serious eye irritation Precautionary statement(s) P280 Wear protective gloves/protective clothing/eye protection/face protection. P305+351+338 IF IN EYES: Rinse cautiously with water for several minutes. Remove contact lenses if present and easy to do - continue rinsing. P411 Store at temperatures not exceeding 0°C 3. Composition, Information or Ingredients Name 1,3-Dihydroxyacetone 4. First Aid Measures 1 Last Updated 11/20/2018 Eye Contact: Check for and remove any contact lenses. Immediately flush eyes with clean, running water for at least 15 minutes while keeping eyes open. Cool water may be used. Seek medical attention. Skin Contact: After contact with skin, wash with generous quantities of running water. Gently and thoroughly wash affected area with running water and non- abrasive soap. Cool water may be used. Cover the affected area with emollient. Seek medical attention. Wash any contaminated clothing prior to reusing. Inhalation: Remove the victim from the source of exposure to fresh, uncontaminated air. If victim's breathing is difficult, administer oxygen. -
Acetone Thermally Treated in Different Solvents Joji Okumura, Tetsuya Yanai, Izumi Yajima and Kazuo Hayashi Kawasaki Research Center, T
Agric. Biol. Chem., 54 (7), 1631-1638, 1990 1631 Volatile Products Formed from L-Cysteine and Dihydroxy- acetone Thermally Treated in Different Solvents Joji Okumura, Tetsuya Yanai, Izumi Yajima and Kazuo Hayashi Kawasaki Research Center, T. Hasegawa Co., Ltd., 335 Kariyado, Nakahara-ku, Kawasaki 211, Japan Received November 21, 1989 Equimolecular amounts of L-cysteine and dihydroxyacetone were heated at 110°C for 3hr in different solvent systems such as deionized water, glycerine, or triglyceride. The resulting mixtures were vacuum steam-distilled and each distillate was extracted with ethyl ether. The volatiles in the ether extracts were analyzed by gas chromatographyand gas chromatograph\-massspectrometry. Differences in the quality and quantity of volatiles formed in the systems were observed. Pyrazines, thiazoles, thiophenes, and someother sulfur-containing compounds wereidentified in the volatiles. Dimethylpyrazines were formed as major volatiles in the glycerine and triglyceride systems but were minor in the water system. 2-Acetylthiazole in the triglyceride system and 2-acetylthiophene in the glycerine system were secondary abundant products. In the water system, l-mercapto-2-propanone was found as a major volatile compound, and thiophenes as the next dominants. The Maillard reaction is significant in the sugar alcohols, oils and fats, or their mixtures formation of flavors from various heated were used for various applications. It has been foods. In the flavor industry, the Maillard observed in some cases that the quality of reaction -
Influence of Battery Power Setting on Carbonyl Emissions from Electronic Cigarettes
Tobacco Induced Diseases Short Report Influence of battery power setting on carbonyl emissions from electronic cigarettes Zuzana Zelinkova1, Thomas Wenzl1 ABSTRACT INTRODUCTION Although e-cigarettes share common features such as power units, heating elements and e-liquids, the variability in design and possibility for AFFILIATION customization represent potential risks for consumers. A main health concern is 1 Joint Research Centre, European Commission, Geel, the exposure to carbonyl compounds, which are formed from the main components Belgium of e-liquids, propylene glycol and glycerol, through thermal decomposition. Levels CORRESPONDENCE TO of carbonyl emissions in e-cigarette aerosols depend, amongst others, on the Thomas Wenzl. Joint Research power supplied to the coil. Thus, e-cigarettes with adjustable power outputs Centre, European Commission, Retieseweg 111, B-2440 Geel, might lead to high exposures to carbonyls if the users increase the power output Belgium. E-mail: Thomas. excessively. The aim of this work was to elucidate the generation of carbonyls in [email protected] relation to undue battery power setting. ORCID ID: https://orcid. org/0000-0003-2017-3788 METHODS Carbonyl emissions were generated by two modular e-cigarettes equipped with two atomizers containing coils of different resistance following the ISO KEYWORDS emission, electronic 20768:2018 method. The battery power output was increased from the lower cigarettes, vaping, carbonyls, wattage level to above the power range recommended by the producer. Carbonyls power setting were trapped by a 2,4-dinitrophenylhydrazine (DNPH) solution and analysed by Received: 25 June 2020 LC-MS/MS. Revised: 22 July 2020 Accepted: 14 August 2020 RESULTS The amount of carbonyl emissions increased with increasing power setting. -
Arxiv:1910.06396V4 [Physics.Pop-Ph] 12 Jun 2021 ∗ Rmtv Ieeitdi H R-Oa Eua(Vni H C System)
Nebula-Relay Hypothesis: Primitive Life in Nebula and Origin of Life on Earth Lei Feng1,2, ∗ 1Key Laboratory of Dark Matter and Space Astronomy, Purple Mountain Observatory, Chinese Academy of Sciences, Nanjing 210023 2Joint Center for Particle, Nuclear Physics and Cosmology, Nanjing University – Purple Mountain Observatory, Nanjing 210093, China Abstract A modified version of panspermia theory, named Nebula-Relay hypothesis or local panspermia, is introduced to explain the origin of life on Earth. Primitive life, acting as the seeds of life on Earth, originated at pre-solar epoch through physicochemical processes and then filled in the pre- solar nebula after the death of pre-solar star. Then the history of life on the Earth can be divided into three epochs: the formation of primitive life in the pre-solar epoch; pre-solar nebula epoch; the formation of solar system and the Earth age of life. The main prediction of our model is that primitive life existed in the pre-solar nebula (even in the current nebulas) and the celestial body formed therein (i.e. solar system). arXiv:1910.06396v4 [physics.pop-ph] 12 Jun 2021 ∗Electronic address: [email protected] 1 I. INTRODUCTION Generally speaking, there are several types of models to interpret the origin of life on Earth. The two most persuasive and popular models are the abiogenesis [1, 2] and pansper- mia theory [3]. The modern version of abiogenesis is also known as chemical origin theory introduced by Oparin in the 1920s [1], and Haldane proposed a similar theory independently [2] at almost the same time. In this theory, the organic compounds are naturally produced from inorganic matters through physicochemical processes and then reassembled into much more complex living creatures. -
Valpos As Efficient Catalysts for Glycerol Conversion to Methanol
catalysts Article VAlPOs as Efficient Catalysts for Glycerol Conversion to Methanol 1, , 2, 2 2 Gheorghit, a Mitran * y, Florentina Neat, u y,S, tefan Neat, u , Mihaela M. Trandafir and Mihaela Florea 1,2,* 1 Department of Organic Chemistry, University of Bucharest, Biochemistry & Catalysis, Faculty of Chemistry, 4-12, Blv. Regina Elisabeta, 030018 Bucharest, Romania 2 National Institute of Material Physics, 405A Atomi¸stilor, P.O. Box MG 7, 077125 Măgurele, Romania; florentina.neatu@infim.ro (F.N.); stefan.neatu@infim.ro (S, .N.); mihaela.trandafir@infim.ro (M.M.T.) * Correspondence: [email protected] (G.M.); mihaela.florea@infim.ro (M.F.) Authors with equal contribution. y Received: 24 April 2020; Accepted: 28 June 2020; Published: 1 July 2020 Abstract: The catalytic activity of a series of vanadium aluminophosphates catalysts prepared by sol-gel method followed by combustion of the obtained gel was evaluated in glycerol conversion towards methanol. The materials were characterized by several techniques such as X-ray diffraction (XRD), UV-vis, Fourier-transform infrared (FTIR), Raman and X-ray photoelectron (XPS) spectroscopies. The amount of vanadium incorporated in aluminophosphates framework played an important role in the catalytic activity, while in the products distribution the key role is played by the vanadium oxidation state on the surface. The sample that contains a large amount of V4+ has the highest selectivity towards methanol. On the sample with the lowest vanadium loading the oxidation path to dihydroxyacetone is predominant. The catalyst with higher content of tetrahedral isolated vanadium species, such V5APO, is less active in breaking the C–C bonds in the glycerol molecule than the one containing polymeric species. -
Experimental Evidence for Glycolaldehyde and Ethylene Glycol Formation by Surface Hydrogenation of CO Molecules Under Dense Molecular Cloud Conditions
Experimental evidence for Glycolaldehyde and Ethylene Glycol formation by surface hydrogenation of CO molecules under dense molecular cloud conditions G. Fedoseev1, a), H. M. Cuppen2, S. Ioppolo2, T. Lamberts1, 2 and H. Linnartz1 1Sackler Laboratory for Astrophysics, Leiden Observatory, University of Leiden, PO Box 9513, NL 2300 RA Leiden, The Netherlands 2Institute for Molecules and Materials, Radboud University Nijmegen, PO Box 9010, NL 6500 GL Nijmegen, The Netherlands Abstract This study focuses on the formation of two molecules of astrobiological importance - glycolaldehyde (HC(O)CH2OH) and ethylene glycol (H2C(OH)CH2OH) - by surface hydrogenation of CO molecules. Our experiments aim at simulating the CO freeze-out stage in interstellar dark cloud regions, well before thermal and energetic processing become dominant. It is shown that along with the formation of H2CO and CH3OH – two well established products of CO hydrogenation – also molecules with more than one carbon atom form. The key step in this process is believed to be the recombination of two HCO radicals followed by the formation of a C-C bond. The experimentally established reaction pathways are implemented into a continuous-time random-walk Monte Carlo model, previously used to model the formation of CH3OH on astrochemical time-scales, to study their impact on the solid-state abundances in dense interstellar clouds of glycolaldehyde and ethylene glycol. Key words: astrochemistry – methods: laboratory – ISM: atoms – ISM: molecules – infrared: ISM. 1 Introduction Among approximately 180 molecules identified in the inter- and circumstellar medium over 50 molecules comprise of six or more atoms. For astrochemical standards, these are seen as ‘complex’ species. -
Fermentation of Dihydroxyacetone by Engineered Escherichia Coli and Klebsiella Variicola to Products
Fermentation of dihydroxyacetone by engineered Escherichia coli and Klebsiella variicola to products Liang Wanga, Diane Chauliaca,1, Mun Su Rheea,2, Anushadevi Panneerselvama, Lonnie O. Ingrama,3, and K. T. Shanmugama,3 aDepartment of Microbiology and Cell Science, University of Florida, Gainesville, FL 32611 Contributed by Lonnie O. Ingram, March 21, 2018 (sent for review January 18, 2018; reviewed by John W. Frost and F. Robert Tabita) Methane can be converted to triose dihydroxyacetone (DHA) by process, formaldehyde can also be produced biologically from chemical processes with formaldehyde as an intermediate. Carbon CO2 with formate as an intermediate (Fig. 1) (7). Dickens and dioxide, a by-product of various industries including ethanol/ Williamson reported as early as 1958 that DHA can be produced butanol biorefineries, can also be converted to formaldehyde biologically by transketolation of hydroxypyruvate and formalde- and then to DHA. DHA, upon entry into a cell and phosphorylation hyde (8). This transketolase is implicated in a unique pentose– to DHA-3-phosphate, enters the glycolytic pathway and can be phosphate–dependent pathway (DHA cycle) in methanol-utilizing fermented to any one of several products. However, DHA is yeast that fixes formaldehyde to xylulose-5-phosphate, yielding inhibitory to microbes due to its chemical interaction with cellular DHA as an intermediate in the production of glyceraldehyde-3- components. Fermentation of DHA to D-lactate by Escherichia coli phosphate in a cyclic mode (9). DHA in the cytoplasm is phos- strain TG113 was inefficient, and growth was inhibited by 30 g·L−1 phorylated by DHA kinase and/or glycerol kinase, and the DHA-P DHA.