Measuring the Electronic Effect of Some Phosphines and Phosphites
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Studies on Nucleoside H-Phosphonoselenoate Chemistry and Chalcogen Exchange Reaction Between P(V) and P(III) Compounds
Studies on nucleoside H-phosphonoselenoate chemistry and chalcogen exchange reaction between P(V) and P(III) compounds Martin Kullberg Stockholm University 2005 Doctoral Dissertation Department of Organic Chemistry Arrhenius Laboratory Stockholm University ISBN 91-7155-163-8 Abstract In this thesis, the chemistry of compounds containing P-Se bonds has been studied. As a new addition to this class of compounds, H-phosphonoselenoate monoesters, have been introduced and two synthetic pathways for their preparation have been developed. The reactivity of H-phosphonoselenoate monoesters towards a variety of condensing agents has been studied. From these, efficient conditions for the synthesis of H-phosphonoselenoate diesters have been developed. The produced diesters have subsequently been used in oxidative transformations, which gave access to the corresponding P(V) compounds, e.g. dinucleoside phosphoroselenoates or dinucleoside phosphoroselenothioates. Furthermore, a new selenizing agent, triphenyl phosphoroselenoate, has been developed for selenization of P(III) compounds. This reagent has high solubility in organic solvents and was found to convert phosphite triesters and H-phosphonate diesters efficiently into the corresponding phosphoroselenoate derivatives. The selenization of P(III) compounds with triphenyl phosphoroselenoate proceeds through a selenium transfer reaction. A computational study was performed to gain insight into a mechanism for this reaction. The results indicate that the transfer of selenium or sulfur from P(V) to P(III) compounds proceeds most likely via an X-philic attack of the P(III) nucleophile on the chalcogen of the P(V) species. For the transfer of oxygen, the reaction may also proceed via an edge attack on the P=O bond. Martin Kullberg 2005 Papers are reprinted with permission of the publishers I Table of contents List of Papers III Abbreviations IV 1. -
The Synthesis of 1,2-Azaphospholes, 1,2-Azaphosphorines and 1,2-Azaphosphepines
The Free Internet Journal Review for Organic Chemistry Archive for Arkivoc 2020, i, 472-498 Organic Chemistry The synthesis of 1,2-azaphospholes, 1,2-azaphosphorines and 1,2-azaphosphepines Noha M. Hassanin,a Tarik E. Ali,b,a* Mohammed A. Assiri,b Hafez M. Elshaaer,a and Somaia M. Abdel-Kariema a Department of Chemistry, Faculty of Education, Ain Shams University, Roxy, Cairo, Egypt b Department of Chemistry, Faculty of Science, King Khalid University, Abha, Saudi Arabia Email: [email protected], [email protected] Received 06-28-2020 Accepted 08-26-2020 Published online 10-22-2020 Abstract 1,2-Azaphospholes, 1,2-azaphosphorines and 1,2-azaphosphepines are prominent phosphorus heterocycles and are of interest due to their potent pharmacological activities. In this review, we provide the available literature data on the synthesis of 1,2-azaphospholes, 1,2-azaphosphorines and 1,2-azaphosphepines. Keywords: 1,2-azaphospholes, 1,2-azaphosphorines, 1,2-azaphosphepines, phosphorus heterocycles DOI: https://doi.org/10.24820/ark.5550190.p011.280 Page 472 ©AUTHOR(S) Arkivoc 2020, i, 472-498 Hassanin, N. M. et al. Table of Contents 1. Introduction 2. Synthetic Methods for Functionalized 1,2-Azaphosphole Derivatives 2.1 Cyclization of ethyl N-methyl-3-bromopropylphosphonamidate with NaH 2.2 Cyclization of -aminophosphorus compounds with bases 2.3 Reaction of methyleneaminophosphanes with activated alkenes and alkynes 2.4 Cyclization of 2-[2-(t-butylimino)cyclohexyl]acetonitrile with PCl3 2.5 Cyclization of 2-imino-2H-chromene-3-carboxamide -
Phosphorus-Containing Amino Acids with a P–C Bond in the Side Chain Or a P–O, P–Sorp–N Bond: Cite This: RSC Adv., 2020, 10, 6678 from Synthesis to Applications
RSC Advances View Article Online REVIEW View Journal | View Issue Phosphorus-containing amino acids with a P–C bond in the side chain or a P–O, P–SorP–N bond: Cite this: RSC Adv., 2020, 10, 6678 from synthesis to applications a b b Mathieu Arribat, Florine Cavelier * and Emmanuelle Remond´ * Since the discovery of (L)-phosphinothricin in the year 1970, the development of a-amino acids bearing a phosphorus group has been of renewed interest due to their diverse applications, including their use in [18F]-fluorolabeling, as fluorescent probes, as protecting groups and in the reversible immobilization of amino acids or peptide derivatives on carbon nanomaterials. Considerable progress has also been achieved in the field of antiviral agents, through the development of phosphoramidate prodrugs, which increase significantly the intracellular delivery of nucleoside monophosphate and monophosphonate analogues. This review aims to summarize the strategies reported in the literature for the synthesis of P(III), P(IV) and P(V) phosphorus-containing amino acids with P–C, P–O, P–SorP–N bonds in the side Received 2nd December 2019 Creative Commons Attribution-NonCommercial 3.0 Unported Licence. chains and their related applications, including their use in natural products, ligands for asymmetric Accepted 22nd January 2020 catalysis, peptidomimetics, therapeutic agents, chemical reagents, markers and nanomaterials. The DOI: 10.1039/c9ra10917j discussion is organized according to the position of the phosphorus atom linkage to the amino acid side rsc.li/rsc-advances chain, either in an a-, b-, g-ord-position or to a hydroxyl, thiol or amino group. 1. Introduction phosphinothricin has engendered the development of numerous drugs for neurodegenerative disease treatment. -
Topological Model on the Inductive Effect in Alkyl Halides Using Local Quantum Similarity and Reactivity Descriptors in the Density Functional Theory
Hindawi Publishing Corporation Journal of Quantum Chemistry Volume 2014, Article ID 850163, 12 pages http://dx.doi.org/10.1155/2014/850163 Research Article Topological Model on the Inductive Effect in Alkyl Halides Using Local Quantum Similarity and Reactivity Descriptors in the Density Functional Theory Alejandro Morales-Bayuelo1,2 and Ricardo Vivas-Reyes1 1 Grupo de Qu´ımica Cuantica´ y Teorica,´ Universidad de Cartagena, Programa de Qu´ımica, Facultad de Ciencias Exactas y Naturales, Cartagena de Indias, Colombia 2 Departamento de Ciencias Qu´ımicas, Universidad Nacional Andres Bello, Republica 275, Santiago, Chile Correspondence should be addressed to Alejandro Morales-Bayuelo; [email protected] and Ricardo Vivas-Reyes; [email protected] Received 19 September 2013; Revised 16 December 2013; Accepted 16 December 2013; Published 19 February 2014 Academic Editor: Daniel Glossman-Mitnik Copyright © 2014 A. Morales-Bayuelo and R. Vivas-Reyes. This is an open access article distributed under the Creative Commons Attribution License, which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. We present a topological analysis to the inductive effect through steric and electrostatic scales of quantitative convergence. Using the molecular similarity field based in the local guantum similarity (LQS) with the Topo-Geometrical Superposition Algorithm (TGSA) alignment method and the chemical reactivity in the density function theory (DFT) context, all calculations were carried out with Amsterdam Density Functional (ADF) code, using the gradient generalized approximation (GGA) and local exchange correlations PW91, in order to characterize the electronic effect by atomic size in the halogens group using a standard Slater-type- orbital basis set. -
Triphenyl Phosphite (TPP) EC No 202-908-4 CAS No 101-02-0
Substance Evaluation Conclusion document EC No 202-908-4 SUBSTANCE EVALUATION CONCLUSION as required by REACH Article 48 and EVALUATION REPORT for Triphenyl Phosphite (TPP) EC No 202-908-4 CAS No 101-02-0 Evaluating Member State(s): UK Dated: March 2019 UK CA Page 1 of 101 March 2019 Substance Evaluation Conclusion document EC No 202-908-4 Evaluating Member State Competent Authority UK REACH CA Health and Safety Executive Redgrave Court Merton Road Bootle Merseyside L20 7HS Email:[email protected] Chemicals Assessment Unit Environment Agency Red Kite House, Howbery Park Wallingford Oxfordshire, OX10 8BD Email: [email protected] Year of evaluation in CoRAP: 2013 Before concluding the substance evaluation a Decision to request further information was issued on: 2 December 2015 Further information on registered substances here: http://echa.europa.eu/web/guest/information-on-chemicals/registered-substances UK CA Page 2 of 101 March 2019 Substance Evaluation Conclusion document EC No 202-908-4 DISCLAIMER This document has been prepared by the evaluating Member State as a part of the substance evaluation process under the REACH Regulation (EC) No 1907/2006. The information and views set out in this document are those of the author and do not necessarily reflect the position or opinion of the European Chemicals Agency or other Member States. The Agency does not guarantee the accuracy of the information included in the document. Neither the Agency nor the evaluating Member State nor any person acting on either of their behalves may be held liable for the use which may be made of the information contained therein. -
Understanding Nonplanarity in Metallabenzene Complexes
1986 Organometallics 2007, 26, 1986-1995 Understanding Nonplanarity in Metallabenzene Complexes Jun Zhu, Guochen Jia,* and Zhenyang Lin* Department of Chemistry, The Hong Kong UniVersity of Science and Technology, Clear Water Bay, Kowloon, Hong Kong, People’s Republic of China ReceiVed February 11, 2007 The nonplanarity found in metallabenzene complexes has been investigated theoretically via density functional theory (DFT) calculations. A metallabenzene has four occupied π molecular orbitals (8 π electrons) instead of three that benzene has. Our electronic structure analyses show that the extra occupied π molecular orbital, which is the highest occupied molecular orbital (HOMO) in many metallabenzenes, has antibonding interactions between the metal center and the metal-bonded ring-carbon atoms, providing the electronic driving force toward nonplanarity. Calculations indicate that the electronic driving force toward nonplanarity, however, is relatively small. Therefore, other factors such as steric effects also play important roles in determining the planarity of these metallabenzene complexes. In this paper, how the various electronic and steric factors interplay has been discussed. Introduction benzene complexes. For example, the formation mechanism and chemical reactivity of metallabenzene complexes have been Metallabenzenes, organometallic compounds formed by extensively studied.17 formal replacement of a CH group in benzene by an isolobal In the studies of metallabenzene complexes, a central issue transition metal fragment, were first considered theoretically by concerns the π-conjugation of the six-membered metal-contain- Hoffman et al. in 1979.1 Since the isolation of the first stable 2 ing ring. Indeed, it is true that metallabenzene complexes are osmabenzenes by Roper’s group in 1982, metallabenzene highly conjugated in view of the fact that the single-double complexes have attracted considerable interest over the last bond alternation is insignificant in the six-membered metal- quarter century. -
Rational Design of Small Molecule Fluorescent Probes for Biological Applications
Organic & Biomolecular Chemistry Rational Design of Small Molecule Fluorescent Probes for Biological Applications Journal: Organic & Biomolecular Chemistry Manuscript ID OB-REV-06-2020-001131.R1 Article Type: Review Article Date Submitted by the 13-Jul-2020 Author: Complete List of Authors: Jun, Joomyung; University of Pennsylvania, Chemistry; Massachusetts Institute of Technology, Chemistry Chenoweth, David; University of Pennsylvania, Department of Chemistry Petersson, E.; University of Pennsylvania, Chemistry Page 1 of 16 Organic & Biomolecular Chemistry ARTICLE Rational Design of Small Molecule Fluorescent Probes for Biological Applications a,b a a,c Received 00th January 20xx, Joomyung V. Jun, David M. Chenoweth* and E. James Petersson* Accepted 00th January 20xx Fluorescent small molecules are powerful tools for visualizing biological events, embodying an essential facet of chemical DOI: 10.1039/x0xx00000x biology. Since the discovery of the first organic fluorophore, quinine, in 1845, both synthetic and theoretical efforts have endeavored to “modulate” fluorescent compounds. An advantage of synthetic dyes is the ability to employ modern organic chemistry strategies to tailor chemical structures and thereby rationally tune photophysical properties and functionality of the fluorophore. This review explores general factors affecting fluorophore excitation and emission spectra, molar absorption, Stokes shift, and quantum efficiency; and provides guidelines for chemist to create novel probes. Structure- property relationships concerning the substituents are discussed in detail with examples for several dye families. Then, we present a survey of functional probes based on PeT, FRET, and environmental or photo-sensitivity, focusing on representative recent work in each category. We believe that a full understanding of dyes with diverse chemical moieties enables the rational design of probes for the precise interrogation of biochemical and biological phenomena. -
Some Transition Metal Complexes of Trivalent Phosphorus Esters
AN ABSTRACT OF THE THESIS OF HARRY VAUGHN STUDER for the MASTER OF SCIENCE (Name) (Degree) inCHEMISTRY (Inorganic) presented on ///( (Major) / (Date') Title: SOME TRANSITION METAL COMPLEXES OF TRIVALENT PHOSPHORUS ESTERS Redacted for Privacy Abstract approved: Dr. In T. Yoke r The ligands in the series EtnP(OEt)3_11, n = 0 - 3,all form pseudotetrahedral high-spin bis -complexes with cobalt (II) chloride. Magnetic, spectrophotometric, conductivity, and molecular weight data show that the phosphorus ester ligands (but not the phosphine) also form five-coordinate low-spin tris-complexes; these can be isolated with the phosphonite and phosphinite ligands, while the existence of the tris -phosphite is marginal.At cobalt (II) to phosphorus ester mole ratios of 1:2, a mixture of species is present in all cases.All are non-conducting in nitrobenzene. The ester complexes are much more susceptible to autoxidation than is the phosphine complex. Some Transition Metal Complexes of Trivalent Phosphorus Esters by Harry Vaughn Studer A THESIS submitted to Oregon State University in partial fulfillment of the requirements for the degree of Master of Science June 1972 APPROVED: Redacted for Privacy Profes of Chemi str y / in crge of major Redacted for Privacy Head of Department of Chemistry Redacted for Privacy Dean of Graduate School Date thesis is presented Typed by Donna Olson f arry Vatighn Studer ACKNOWLEDGEMENTS The author wishes to thank his research advisor, Dr. John T. Yoke, for his expert direction of this research, for his patience, and for the opportunity of learning through association with him. Acknowledgement is made to the donors of the Petroleum Re- search Fund, administered by the American Chemical Society, for the support of this work. -
United States Patent (19) 11 Patent Number: 4,889,661 Kleiner 45 Date of Patent: Dec
United States Patent (19) 11 Patent Number: 4,889,661 Kleiner 45 Date of Patent: Dec. 26, 1989 (54) PROCESS FOR THE PREPARATION OF Kosolapoff, G. M. et al. Organic Phosphorus Compounds AROMATIC PHOSPHORUS-CHLORNE (1973) vol. 4 at p. 95. Wiley-Interscience, Publ. COMPOUNDS Kosolapoff, Gennady M. Organophosphorus Com 75 Inventor: Hans-Jerg Kleiner, pounds (1958), John Wiley & Sons, Publ. pp. 59-60. Kronberg/Taunus, Fed. Rep. of Primary Examiner-Paul J. Killos Germany Attorney, Agent, or Firm-Curtis, Morris & Safford 73) Assignee: Hoechst Aktiengesellschaft, 57 ABSTRACT Frankfurt am Main, Fed. Rep. of Aromatic phosphorus-chlorine compounds, especially Germany diphenylphosphinyl chloride (C6H5)2P(O)Cl, phenyl phosphonyl dichloride C6HsP(O)Cl2, dichlorophenyl 21 Appl. No.: 554,591 phosphine C6HsPCl2 and chlorodiphenylphosphine (C6H5)2PCl, and the corresponding sulfur analogs, are 22 Filed: Nov. 23, 1983 obtained by reaction of aromatic phosphorus com 30 Foreign Application Priority Data pounds, which contain oxygen or sulfur, of the formula I Nov. 27, 1982 DE Fed. Rep. of Germany ....... 324.4031 511 Int, C.'................................................ CO7C 5/02 52 U.S. C. .................................... 562/815; 562/818; 562/819 58) Field of Search ..................................... 260/543 P in which X=O or S, and m= 1, 2 or 3, with phosphorus 56) References Cited chlorine compounds of the formula II U.S. PATENT DOCUMENTS (C6H5)3P Cln (II) 3,244,745 4/1966 Toy et al. ........................ 260/543 P FOREIGN PATENT DOCUMENTS in which n=1, 2 or 3, at temperatures between about 0093420 4/1983 European Pat. Off. 330 and 700° C. Preferred starting materials are tri phenylphosphine oxide (C6H5)3PO and phosphorus OTHER PUBLICATIONS trichloride PCl3. -
Coordination Chemistry in Liquid Ammonia and Phosphorous Donor Solvents
Coordination Chemistry in Liquid Ammonia and Phosphorous Donor Solvents Kersti B. Nilsson Faculty of Natural Resources and Agricultural Sciences Department of Chemistry Uppsala Doctoral thesis Swedish University of Agricultural Sciences Uppsala 2005 Acta Universitatis Agriculturae Sueciae 2005: number 21 ISSN 1652-6880 ISBN 91-576-7020-x © 2005 Kersti B. Nilsson, Uppsala Tryck: SLU Service/Repro, Uppsala 2005 Abstract Nilsson, K. B., Coordination chemistry in liquid ammonia and phosphorous donor solvents. Doctor’s dissertation. ISSN 1652-6880, ISBN 91-576-7020-x The thesis summarizes and discusses the results from coordination chemistry studies of solvated d10 metal and copper(II) ions, and mercury(II) halide complexes in the strong electron-pair donor solvents liquid and aqueous ammonia, trialkyl phosphite, triphenyl phosphite and trialkylphosphine. The main techniques used are EXAFS, metal NMR and vibrational spectroscopy, and crystallography. Four crystal structures containing ammonia solvated metal ions have been determined. Questions addressed concern whether any changes in the preferential coordination numbers and geometries occur when these metal ions are transferred from aqueous ammonia to liquid ammonia solution, or to phosphorous donor solvents. Liquid ammonia and trialkyl phosphites are found to possess similar electron-pair donor properties, DS=56 for both, while trialkylphosphines are known to be even stronger electron-pair donors. The studies reveal that the ammonia-solvated d10 metal ions obtain very different configurations in liquid ammonia, with gold(I) being linear, copper(I) and silver(I) trigonal, zinc(II) and mercury(II) tetrahedral, and cadmium(II), indium(III) and thallium(III) octahedral. The ammonia-solvated copper(I) and silver(I) ions are linear in aqueous ammonia solution because of the lower ammonia activity, as the third ammine complexes are very weak in aqueous systems. -
Metal Complexes As Catalysts for the Synthesis of Heterocycles
METAL COMPLEXES AS CATALYSTS FOR THE SYNTHESIS OF HETEROCYCLES Steven Lal Department of Chemistry, Imperial College London A thesis submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy, Imperial College London May 2013 1 Declaration I certify that all the work in this thesis is solely my own, except where explicitly stated and appropriately referenced. No part of the thesis has been submitted previously for a degree at this, or any other, university. 2 Copyright Notice Imperial College of Science, Technology and Medicine Department Of Chemistry Metal Complexes as Catalysts for the Synthesis of Heterocycles © 2013 Steven Lal [email protected] The copyright of this thesis rests with the author and is made available under a Creative Commons Attribution Non-Commercial No Derivatives License. Researchers are free to copy, distribute or transmit the thesis on the condition that they attribute it, that they do not use it for commercial purposes and that they do not alter, transform or build upon it. For any reuse or redistribution, researchers must make clear to others the license terms of this work. Steven Lal Department of Chemistry Imperial College London Exhibition Road London SW7 2AZ UK www.imperial.ac.uk 3 Contents Abstract ...................................................................................................................................... 8 Acknowledgements ................................................................................................................. -
Principles of Drug Action 1, Spring 2005, Resonance and Induction
Principles Of Drug Action 1, Spring 2005, Resonance and Induction RESONANCE AND INDUCTION TUTORIAL Jack DeRuiter The terms "resonance" and "induction" refer to the electronic effects that atoms or functional groups may have within a compound. These effects are defined below and are dependent on the valence, bonding order and electronegativity of atoms, as well as the molecular geometry. Thus it is important that you understand these concepts prior to reviewing this tutorial. I. INDUCTION Induction or the inductive effect of an atom or functional group is a function of that groups 1). electronegativity, 2). bonding order and charge and 3). position within a structure. Inductive effects refer to those electronic effects of an atom or functional group can contribute through single bonds such as saturated (sp3) carbon atoms! This is very different from resonance effects discussed later in this section. The contribution of electronegativity, bonding order and position toward induction is as follows: Electronegativity: Atoms or functional groups that are electronegative relative to hydrogen such as the halogens, oxygen, nitrogen, etc. may have a negative inductive effect (-I), depending on their bonding order (see the Table below). Thus these atoms withdraw electron density through the single bond structure of a compound and can assist in the stabilization of negative charge that may form in reactions. One such reaction where -I groups can have a stabilizing (enhancing) effect is the ionization of acids. Consider the case of acetic acid, chloroacetic acid and trichloroacetic acid shown below. All three of these compounds can ionize (loss of proton from the carboxyl OH).