Female Control of Paternity in a Cooperatively Polyandrous Cichlid
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§4-71-6.5 LIST of CONDITIONALLY APPROVED ANIMALS November
§4-71-6.5 LIST OF CONDITIONALLY APPROVED ANIMALS November 28, 2006 SCIENTIFIC NAME COMMON NAME INVERTEBRATES PHYLUM Annelida CLASS Oligochaeta ORDER Plesiopora FAMILY Tubificidae Tubifex (all species in genus) worm, tubifex PHYLUM Arthropoda CLASS Crustacea ORDER Anostraca FAMILY Artemiidae Artemia (all species in genus) shrimp, brine ORDER Cladocera FAMILY Daphnidae Daphnia (all species in genus) flea, water ORDER Decapoda FAMILY Atelecyclidae Erimacrus isenbeckii crab, horsehair FAMILY Cancridae Cancer antennarius crab, California rock Cancer anthonyi crab, yellowstone Cancer borealis crab, Jonah Cancer magister crab, dungeness Cancer productus crab, rock (red) FAMILY Geryonidae Geryon affinis crab, golden FAMILY Lithodidae Paralithodes camtschatica crab, Alaskan king FAMILY Majidae Chionocetes bairdi crab, snow Chionocetes opilio crab, snow 1 CONDITIONAL ANIMAL LIST §4-71-6.5 SCIENTIFIC NAME COMMON NAME Chionocetes tanneri crab, snow FAMILY Nephropidae Homarus (all species in genus) lobster, true FAMILY Palaemonidae Macrobrachium lar shrimp, freshwater Macrobrachium rosenbergi prawn, giant long-legged FAMILY Palinuridae Jasus (all species in genus) crayfish, saltwater; lobster Panulirus argus lobster, Atlantic spiny Panulirus longipes femoristriga crayfish, saltwater Panulirus pencillatus lobster, spiny FAMILY Portunidae Callinectes sapidus crab, blue Scylla serrata crab, Samoan; serrate, swimming FAMILY Raninidae Ranina ranina crab, spanner; red frog, Hawaiian CLASS Insecta ORDER Coleoptera FAMILY Tenebrionidae Tenebrio molitor mealworm, -
Spatial Models of Speciation 1.0Cm Modelos Espaciais De Especiação
UNIVERSIDADE ESTADUAL DE CAMPINAS INSTITUTO DE BIOLOGIA CAROLINA LEMES NASCIMENTO COSTA SPATIAL MODELS OF SPECIATION MODELOS ESPACIAIS DE ESPECIAÇÃO CAMPINAS 2019 CAROLINA LEMES NASCIMENTO COSTA SPATIAL MODELS OF SPECIATION MODELOS ESPACIAIS DE ESPECIAÇÃO Thesis presented to the Institute of Biology of the University of Campinas in partial fulfill- ment of the requirements for the degree of Doc- tor in Ecology Tese apresentada ao Instituto de Biologia da Universidade Estadual de Campinas como parte dos requisitos exigidos para a obtenção do título de Doutora em Ecologia Orientador: Marcus Aloizio Martinez de Aguiar ESTE ARQUIVO DIGITAL CORRESPONDE À VERSÃO FINAL DA TESE DEFENDIDA PELA ALUNA CAROLINA LEMES NASCIMENTO COSTA, E ORIENTADA PELO PROF DR. MAR- CUS ALOIZIO MARTINEZ DE AGUIAR. CAMPINAS 2019 Ficha catalográfica Universidade Estadual de Campinas Biblioteca do Instituto de Biologia Mara Janaina de Oliveira - CRB 8/6972 Costa, Carolina Lemes Nascimento, 1989- C823s CosSpatial models of speciation / Carolina Lemes Nascimento Costa. – Campinas, SP : [s.n.], 2019. CosOrientador: Marcus Aloizio Martinez de Aguiar. CosTese (doutorado) – Universidade Estadual de Campinas, Instituto de Biologia. Cos1. Especiação. 2. Radiação adaptativa (Evolução). 3. Modelos biológicos. 4. Padrão espacial. 5. Macroevolução. I. Aguiar, Marcus Aloizio Martinez de, 1960-. II. Universidade Estadual de Campinas. Instituto de Biologia. III. Título. Informações para Biblioteca Digital Título em outro idioma: Modelos espaciais de especiação Palavras-chave em inglês: Speciation Adaptive radiation (Evolution) Biological models Spatial pattern Macroevolution Área de concentração: Ecologia Titulação: Doutora em Ecologia Banca examinadora: Marcus Aloizio Martinez de Aguiar [Orientador] Mathias Mistretta Pires Sabrina Borges Lino Araujo Rodrigo André Caetano Gustavo Burin Ferreira Data de defesa: 25-02-2019 Programa de Pós-Graduação: Ecologia Powered by TCPDF (www.tcpdf.org) Comissão Examinadora: Prof. -
Testing the Potential of Environmental DNA Methods for Surveying Lake Tanganyika's Highly Diverse Fish Communities Christopher J
Testing the potential of environmental DNA methods for surveying Lake Tanganyika's highly diverse fish communities Christopher James Doble A thesis submitted for the degree of Doctor of Philosophy Department of Genetics, Evolution and Environment University College London April 2020 1 Declaration I, Christopher James Doble, confirm the work presented in this thesis is my own. Where information has been derived from other sources, I confirm this has been indicated in the thesis. Christopher James Doble Date: 27/04/2020 2 Statement of authorship I planned and undertook fieldwork to the Kigoma region of Lake Tanganyika, Tanzania in 2016 and 2017. This included obtaining research permits, collecting environmental DNA samples and undertaking fish community visual survey data used in Chapters three and four. For Chapter two, cichlid reference database sequences were sequenced by Walter Salzburger’s research group at the University of Basel. I extracted required regions from mitochondrial genome alignments during a visit to Walter’s research group. Other reference sequences were obtained by Sanger sequencing. I undertook the DNA extractions and PCR amplifications for all samples, with the clean-up and sequencing undertaken by the UCL Sequencing facility. I undertook the method development, DNA extractions, PCR amplifications and library preparations for each of the next generation sequencing runs in Chapters three and four at the NERC Biomolecular Analysis Facility Sheffield. Following training by Helen Hipperson at the NERC Biomolecular Analysis Facility in Sheffield, I undertook the bioinformatic analysis of sequence data in Chapters three and four. I also carried out all the data analysis within each chapter. Chapters two, three and parts of four have formed a manuscript recently published in Environmental DNA (Doble et al. -
Maarten VAN STEENBERGE 1,2*#, Maarten P.M. VANHOVE 1,2
ACTA ICHTHYOLOGICA ET PISCATORIA (2011) 41 (3): 201–214 DOI: 10.3750/AIP2011.41.3.08 A RECENT INVENTORY OF THE FISHES OF THE NORTH-WESTERN AND CENTRAL WESTERN COAST OF LAKE TANGANYIKA (DEMOCRATIC REPUBLIC CONGO) Maarten VAN STEENBERGE 1,2*# , Maarten P.M. VANHOVE 1,2# , Donatien MUZUMANI RISASI 3, Théophile MULIMBWA N’SIBULA 3, Fidel MUTEREZI BUKINGA 3, Antoine PARISELLE 4, Céline GILLARDIN 2, Emmanuel VREVEN 1, Joost A.M. RAEYMAEKERS 2, Tine HUYSE 2, Filip A.M. VOLCKAERT 2, Venant NSHOMBO MUDERHWA 3, and Jos SNOEKS 1,2 1 Ichthyology Unit, African Zoology Department, Royal Museum for Central Africa, Leuvensesteenweg 13, B-3080, Tervuren, Belgium 2 Laboratory of Animal Diversity and Systematics, Department of Biology, Katholieke Universiteit Leuven, Charles Deberiotstraat 32, B-3000, Leuven, Belgium 3 Section de Zoologie, Département de Biologie, Centre de Recherche en Hydrobiologie, B.P. 73, Uvira, Democratic Republic Congo. Via B.P. 254 Bujumbura, Burundi 4 ISE-M, UMR5554 CNRS, UR226 IRD, Université Montpellier II – CC 063, F-34095, Montpellier Cedex 5, France Van Steenberge M., Vanhove M.P.M., Muzumani Risasi D., Mulimbwa N’sibula T., Muterezi Bukinga F., Pariselle A., Gillardin C., Vreven E., Raeymaekers J.A.M., Huyse T., Volckaert F.A.M., Nshombo Muderhwa V., Snoeks J. 2011. A recent inventory of the fishes of the north-western and central west - ern coast of Lake Tanganyika (Democratic Republic Congo). Acta Ichthyol. Piscat. 41 (3): 201–214. Background. Despite the importance of Lake Tanganyika’s biodiversity for science and the livelihoods of the riparian people, high-resolution surveys of the fish biodiversity are sparse and fragmentary, especially along the western (Congolese) shoreline. -
Chalinochromis Cyanophleps, a New Species of Cichlid Fish (Teleostei: Cichlidae) from Lake Tanganyika
Zootaxa 3790 (3): 425–438 ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2014 Magnolia Press ISSN 1175-5334 (online edition) http://dx.doi.org/10.11646/zootaxa.3790.3.2 http://zoobank.org/urn:lsid:zoobank.org:pub:D3B2BFCF-8BA4-45FD-B353-F76BB81DE07F Chalinochromis cyanophleps, a new species of cichlid fish (Teleostei: Cichlidae) from Lake Tanganyika SVEN O. KULLANDER1, MIKAEL KARLSSON2, MAGNUS KARLSSON2 & MICHAEL NORÉN1 1Department of Zoology, Swedish Museum of Natural History, P.O. Box 50007, SE-104 05 Stockholm, Sweden. E-mail: [email protected], [email protected] 2African Diving Ltd, P. O. Box 7095, Dar es Salaam, Tanzania. E-mail: [email protected] Abstract Chalinochromis cyanophleps is described from nine specimens, the largest 129 mm SL, from Namansi. It differs from other species of Chalinochromis in plain trunk colouration, absence of black stripes on the head, relatively narrow lips, presence of tricuspid jaw teeth, and presence of five rather than four dentary lateralis foramina. The blue iridescent stripe below the eye is shared with other lamprologin cichlids, but is broader and more conspicuous in C. cyanophleps. Chal- inochromis cyanophleps occurs at depths between 6 and 45 m in rocky habitats along the Tanzanian coast of Lake Tang- anyika, from Mvuna Island south to Kalala Island, a stretch of about 90 km. Field observations were made of specimens up to 18 cm total length. The COI DNA barcode sequence differs by 1.8% from that of C. popelini. Key words: DNA Barcode, endemism, meristics, morphometry, taxonomy Introduction The endemic Lake Tanganyika cichlid genus Chalinochromis Poll (1974) presently includes two species characterized by steep head profile and thick papillose lips. -
Bentho-Pelagic Divergence of Cichlid Feeding Architecture Was Prodigious and Consistent During Multiple Adaptive Radiations Within African Rift-Lakes
Bentho-Pelagic Divergence of Cichlid Feeding Architecture Was Prodigious and Consistent during Multiple Adaptive Radiations within African Rift-Lakes W. James Cooper1*, Kevin Parsons1, Alyssa McIntyre2, Brittany Kern1, Alana McGee-Moore1, R. Craig Albertson1 1 Department of Biology, Syracuse University, Syracuse, New York, United States of America, 2 School of Dental Medicine, University of Connecticut, Storrs, Connecticut, United States of America Abstract Background: How particular changes in functional morphology can repeatedly promote ecological diversification is an active area of evolutionary investigation. The African rift-lake cichlids offer a calibrated time series of the most dramatic adaptive radiations of vertebrate trophic morphology yet described, and the replicate nature of these events provides a unique opportunity to test whether common changes in functional morphology have repeatedly facilitated their ecological success. Methodology/Principal Findings: Specimens from 87 genera of cichlid fishes endemic to Lakes Tanganyka, Malawi and Victoria were dissected in order to examine the functional morphology of cichlid feeding. We quantified shape using geometric morphometrics and compared patterns of morphological diversity using a series of analytical tests. The primary axes of divergence were conserved among all three radiations, and the most prevalent changes involved the size of the preorbital region of the skull. Even the fishes from the youngest of these lakes (Victoria), which exhibit the lowest amount of skull shape -
The Taxonomic Diversity of the Cichlid Fish Fauna of Ancient Lake
JGLR-01482; No. of pages: 12; 4C: Journal of Great Lakes Research xxx (xxxx) xxx Contents lists available at ScienceDirect Journal of Great Lakes Research journal homepage: www.elsevier.com/locate/jglr Review The taxonomic diversity of the cichlid fish fauna of ancient Lake Tanganyika, East Africa Fabrizia Ronco ⁎, Heinz H. Büscher, Adrian Indermaur, Walter Salzburger Zoological Institute, University of Basel, Vesalgasse 1, 4051 Basel, Switzerland article info abstract Article history: Ancient Lake Tanganyika in East Africa houses the world's ecologically and morphologically most diverse assem- Received 29 January 2019 blage of cichlid fishes, and the third most species-rich after lakes Malawi and Victoria. Despite long-lasting scien- 10 April 2019 tific interest in the cichlid species flocks of the East African Great Lakes, for example in the context of adaptive Accepted 29 April 2019 radiation and explosive diversification, their taxonomy and systematics are only partially explored; and many Available online xxxx cichlid species still await their formal description. Here, we provide a current inventory of the cichlid fish Communicated by Björn Stelbrink fauna of Lake Tanganyika, providing a complete list of all valid 208 Tanganyikan cichlid species, and discuss the taxonomic status of more than 50 undescribed taxa on the basis of the available literature as well as our Keywords: own observations and collections around the lake. This leads us to conclude that there are at least 241 cichlid spe- Biodiversity cies present in Lake Tanganyika, all but two are endemic to the basin. We finally summarize some of the major Ichthyodiversity taxonomic challenges regarding Lake Tanganyika's cichlid fauna. -
Cichliden Von a Bis Z
Cichliden von A bis Z Chalinochromis cyanophleps KULLANDER, KARLSSON, KARLSSON & NORÉN, 2014 Magara in Burundi und der von Chali- nochromis popelini Brichard 1989 bei Moba an der kongolesischen West- küste. Es sind jedoch zwei weitere, bisher un- beschriebene Arten bekannt: Chalino- chromis sp. „Ndobhoi” aus der Umgebung von Karilani Island und Bulu Point trägt auf dem Körper zwei Längsreihen länglicher dunkler Fle- cken. Die Verbreitung dieses Buntbar- sches erstreckt sich an der tansanischen Ostküste von Katumba Point bis etwas nördlich des Lubulungu River. Chali- nochromis sp. „bifrenatus“ ist weiter südlich verbreitet und hat ebenso wie Chalinochromis popelini zwei dunkle Längsstreifen auf den Körperseiten, Chalinochromis cyanophleps bei Namansi, dem Typusfundort, in einer Tiefe von acht Metern. aber im Unterschied zu jener Art keine (Unterwasserfoto: M. Karlsson) zweizipfelige, sondern eine rundliche Synonyme: keine; vor ihrer taxonomi- Ersteinfuhr: Chalinochromis cya- bis gestutzte Schwanzflosse, keinen schen Bearbeitung wurde die Art als nophleps wurde bisher nicht als Aqua- Schwanzwurzelfleck und keinen dritten Chalinochromis sp. “blue vein” be- riumfisch nach Deutschland importiert. dunklen Längsstreifen am Grund der zeichnet, und KONINGS (1998: S. 104, Rückenflosse. Diese Art ist im Südos- Abb. 6-7) identifizierte sie irrtümlich Typusmaterial: fünf adulte Männchen ten des Sees zwischen den der Ort- als Chalinochromis popelini. und vier Weibchen mit Standardlängen schaft Kipili vorgelagerten Inseln und zwischen 103.3 und 129 Millimeter. der Umgebung des Dorfes Lusekese in Etymologie: Gattungsname: chalino der Kala Bay verbreitet, wo sie - teil- (gr.) = Zügel; Chromis galt früher auf- Typusfundort: Zentrale Ostküste des weise syntop - mit Chalinochromis grund einer Fehldefinition als Gattung Tanganjikasees (Tanzania, Rukwa Re- cyanophleps vorkommt. -
Table S1. Species Studied and Specimen Information. Columns
Table S1. Species studied and specimen information. Columns refer to: tribe, species, species authority, the number of individuals sampled for intestine length and N isotope value (n), trophic guild membership as inferred from gut contents (Guild; Hori et al. 2003; P. McIntyre unpublished), voucher specimen accession numbers at the Cornell University Museum of Vertebrates (CUMV), mean intestine length (IL; cm), standard error intestine length (SE-IL), mean mass (M; g), standard error mass (SE-M), and mtDNA sequence data Genbank accession numbers for ND2 and CytB. Tribe names after Poll (1986), except as noted. All specimens were collected with permission from the University of Dar es Salaam in Tanzania. (Trophic guilds: P = piscivore; Z = zooplanktivore; A = algivore; I = invertivore; S = scale-eater.) Tribe Species Sp. Authority n Guild CUMV # IL SE-IL M SE-M ND 2 CytB Bathybatini Bathybates fasciatus Boulenger 1901 3 P 88627 108 9.29 20 11.13 EF679236 EF679268 Boulengerochromini1 Boulengerchromis microlepis Boulenger 1899 3 P 88760 177.67 14.52 21.31 1.15 EF679235 EF679267 1 Cyphotilapini Cyphotilapia frontosa Boulenger 1906 4 P 88626 144.5 39.7 144.3 57.37 EF679242 EF679274 Cyprichromini Cyprichromis leptosoma Boulenger 1898 4 Z 88630 99 6.89 9.96 0.29 EF679243 EF679275 Ectodini Xenotilapia leptura Boulenger 1901 3 A 89304 211.67 10.81 8.39 0.68 EF679238 EF679270 Poll & Matthes Opthalmotilapia heterodonta 1962 3 A 88644 397 34.43 28.54 2.66 EF679254 EF679286 Eretmodini Eretmodus cyanostictus Boulenger 1898 3 A 88640 184 15.72 7.12 0.79 -
Surat Perubahan Format Sertifikat Kesehatan Untuk
Lampiran 1a LAMA Health Certification For Goldfish Exported to Australia I, the undersigned, certify that: 1. I have within 7 days prior to export examined the goldfish (Carassius auratus) described on the attached invoice, and that they show no clinical signs of infectious disease or pests. 2. The export premises described below is approved as meeting standards under Australian Quarantine and Inspection Service Conditions for the Importation of Live Freshwater Ornamental Finfish into Australia. 3. All fish being held at export premises exhibit no signs of significant infectious disease or pests and are sourced from populations not associated with any significant disease or pests within the 6 months prior to certification. Invoice number: .................. Exporter Name: ........................... Address: ................................................................................... Phone No: ................. Fax No: ..................... E-mail: ............... AQIS Import Permit number: .................................................... Number (tails of fish): ................................................................ 4. All fish in the consignment have been in approved premises in the exporting country for the 14 days prior to export. 5. The fish have not been kept in water in common with farmed foodfish (fish farmed for human consumption including recreational fishing) or koi carp. 6. The exporting country, zone or export premises is free from spring viraemia of carp virus (SVCV) and Aeromonas salmonicida (other than goldfish ulcer disease strains) based on (a) the absence of clinical, laboratory or epidemiological evidence of these disease agents in the source fish population in the previous two years and (b) a system of monitoring and surveillance for the previous two years, as prescribed in Appendix 2a of the AQIA Conditions for the Importation of Live Freshwater Ornamental Finfish into Australia. -
Supporting Information
Supporting Information Fitzpatrick et al. 10.1073/pnas.0809990106 SI Methods likely to lead to 2 and 3, which in turn leads to 4. We can assess Testing the Directionality of Evolutionary Transitions. BayesDiscrete these possible evolutionary transitions by examining the tran- (www.evolution.rdg.ac.uk) (1) uses discrete binary data (0 and 1) sition parameters leading away from value 1. For example, the to assess all possible transitions between 2 traits. Traits assigned as evolutionary pathway of value 1 to 2 to 4 indicates that changes binary variables create 4 possible values (1 value per species) that in trait 2 preceded changes in trait 1, because the value 1 traits can be described as [trait 1,trait 2] as follows: [0,0], [0,1], [1,0], [1,1]. [0,0] shifted to value 2 traits [0,1]. Applying this logic, we can BayesDiscrete allows forward and reverse transitions between these assess the other possible evolutionary transitions described in 4 values, so there are 8 possible transitions between values: 4 our example above. forward and 4 reverse. Each transition parameter (q) is assigned a We assessed the frequency that transition parameters where unique numerical code describing the direction of change between set equal to zero using a reversible-jump Markov chain Monte Carlo (RJ MCMC) method, which explores the entire parameter 2 states. For example, q represents a transition from value 1 to 1,2 space. We selected a subsample of trees from the 2 million value 2, and q represents the reverse transition from state 2 to 2,1 generations produced from our MrBayes analysis. -
Bayesian Node Dating Based on Probabilities of Fossil Sampling Supports Trans-Atlantic Dispersal of Cichlid Fishes
Supporting Information Bayesian Node Dating based on Probabilities of Fossil Sampling Supports Trans-Atlantic Dispersal of Cichlid Fishes Michael Matschiner,1,2y Zuzana Musilov´a,2,3 Julia M. I. Barth,1 Zuzana Starostov´a,3 Walter Salzburger,1,2 Mike Steel,4 and Remco Bouckaert5,6y Addresses: 1Centre for Ecological and Evolutionary Synthesis (CEES), Department of Biosciences, University of Oslo, Oslo, Norway 2Zoological Institute, University of Basel, Basel, Switzerland 3Department of Zoology, Faculty of Science, Charles University in Prague, Prague, Czech Republic 4Department of Mathematics and Statistics, University of Canterbury, Christchurch, New Zealand 5Department of Computer Science, University of Auckland, Auckland, New Zealand 6Computational Evolution Group, University of Auckland, Auckland, New Zealand yCorresponding author: E-mail: [email protected], [email protected] 1 Supplementary Text 1 1 Supplementary Text Supplementary Text S1: Sequencing protocols. Mitochondrial genomes of 26 cichlid species were amplified by long-range PCR followed by the 454 pyrosequencing on a GS Roche Junior platform. The primers for long-range PCR were designed specifically in the mitogenomic regions with low interspecific variability. The whole mitogenome of most species was amplified as three fragments using the following primer sets: for the region between position 2 500 bp and 7 300 bp (of mitogenome starting with tRNA-Phe), we used forward primers ZM2500F (5'-ACG ACC TCG ATG TTG GAT CAG GAC ATC C-3'), L2508KAW (Kawaguchi et al. 2001) or S-LA-16SF (Miya & Nishida 2000) and reverse primer ZM7350R (5'-TTA AGG CGT GGT CGT GGA AGT GAA GAA G-3'). The region between 7 300 bp and 12 300 bp was amplified using primers ZM7300F (5'-GCA CAT CCC TCC CAA CTA GGW TTT CAA GAT GC-3') and ZM12300R (5'-TTG CAC CAA GAG TTT TTG GTT CCT AAG ACC-3').