plants Review Fantastic Downy Mildew Pathogens and How to Find Them: Advances in Detection and Diagnostics Andres F. Salcedo 1 , Savithri Purayannur 1 , Jeffrey R. Standish 1 , Timothy Miles 2, Lindsey Thiessen 1 and Lina M. Quesada-Ocampo 1,* 1 Department of Entomology and Plant Pathology, North Carolina State University, Raleigh, NC 27695-7613, USA;
[email protected] (A.F.S.);
[email protected] (S.P.);
[email protected] (J.R.S.);
[email protected] (L.T.) 2 Department of Plant, Soil and Microbial Sciences, Michigan State University, East Lansing, MI 48824, USA;
[email protected] * Correspondence:
[email protected] Abstract: Downy mildews affect important crops and cause severe losses in production worldwide. Accurate identification and monitoring of these plant pathogens, especially at early stages of the disease, is fundamental in achieving effective disease control. The rapid development of molecular methods for diagnosis has provided more specific, fast, reliable, sensitive, and portable alternatives for plant pathogen detection and quantification than traditional approaches. In this review, we provide information on the use of molecular markers, serological techniques, and nucleic acid amplification technologies for downy mildew diagnosis, highlighting the benefits and disadvantages of the technologies and target selection. We emphasize the importance of incorporating information on pathogen variability in virulence and fungicide resistance for disease management and how the Citation: Salcedo, A.F.; Purayannur, development and application of diagnostic assays based on standard and promising technologies, S.; Standish, J.R.; Miles, T.; Thiessen, including high-throughput sequencing and genomics, are revolutionizing the development of species- L.; Quesada-Ocampo, L.M. Fantastic specific assays suitable for in-field diagnosis.