Food Microbiology Unveiling Hákarl: a Study of the Microbiota of The
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Fermented and Ripened Fish Products in the Northern European Countries
Accepted Manuscript Fermented and ripened fish products in the Northern European countries Torstein Skåra, Lars Axelsson, Gudmundur Stefánsson, Bo Ekstrand, Helge Hagen PII: S2352-6181(15)00005-0 DOI: 10.1016/j.jef.2015.02.004 Reference: JEF 12 To appear in: Journal of Ethnic Foods Received Date: 16 January 2015 Revised Date: 23 January 2015 Accepted Date: 2 February 2015 Please cite this article as: Skåra T, Axelsson L, Stefánsson G, Ekstrand B, Hagen H, Fermented and ripened fish products in the Northern European countries, Journal of Ethnic Foods (2015), doi: 10.1016/ j.jef.2015.02.004. This is a PDF file of an unedited manuscript that has been accepted for publication. As a service to our customers we are providing this early version of the manuscript. The manuscript will undergo copyediting, typesetting, and review of the resulting proof before it is published in its final form. Please note that during the production process errors may be discovered which could affect the content, and all legal disclaimers that apply to the journal pertain. ACCEPTED MANUSCRIPT 1 Fermented and ripened fish products in the Northern European countries 2 Torstein Skåra 1* , Lars Axelsson 2, Gudmundur Stefánsson 3, Bo Ekstrand 4 and Helge Hagen 5 3 1 Nofima - Norwegian Institute of Food, Fisheries, and Aquaculture Research, Postboks 8034, 4 NO-4068 Stavanger, Norway 5 2 Nofima - Norwegian Institute of Food, Fisheries, and Aquaculture Research, P.O.Box 210, 6 NO-1431 Ås, Norway 7 3 Matis, Vinlandsleid 12, 113 Reykjavik, Iceland 8 4 Bioconsult AB, Stora Vägen 49, SE-523 61 Gällstad, Sweden 5 MANUSCRIPT 9 Dælivegen 118, NO-2385 Brumunddal, Norway 10 *Author for correspondence: Tel: +47-51844600; Fax: +47-51844651 11 E-mail. -
Debaryomyces Hansenii Strains Isolated from Danish Cheese Brines Act As Biocontrol Agents to Inhibit Germination and Growth of Contaminating Molds
Debaryomyces hansenii Strains Isolated From Danish Cheese Brines Act as Biocontrol Agents to Inhibit Germination and Growth of Contaminating Molds Huang, Chuchu; Zhang, Ling; Johansen, Pernille Greve; Petersen, Mikael Agerlin; Arneborg, Nils; Jespersen, Lene Published in: Frontiers in Microbiology DOI: 10.3389/fmicb.2021.662785 Publication date: 2021 Document version Publisher's PDF, also known as Version of record Document license: CC BY Citation for published version (APA): Huang, C., Zhang, L., Johansen, P. G., Petersen, M. A., Arneborg, N., & Jespersen, L. (2021). Debaryomyces hansenii Strains Isolated From Danish Cheese Brines Act as Biocontrol Agents to Inhibit Germination and Growth of Contaminating Molds. Frontiers in Microbiology, 12, [662785]. https://doi.org/10.3389/fmicb.2021.662785 Download date: 03. okt.. 2021 fmicb-12-662785 June 9, 2021 Time: 17:39 # 1 ORIGINAL RESEARCH published: 15 June 2021 doi: 10.3389/fmicb.2021.662785 Debaryomyces hansenii Strains Isolated From Danish Cheese Brines Act as Biocontrol Agents to Inhibit Germination and Growth of Contaminating Molds Chuchu Huang, Ling Zhang, Pernille Greve Johansen, Mikael Agerlin Petersen, Nils Arneborg and Lene Jespersen* Department of Food Science, Faculty of Science, University of Copenhagen, Copenhagen, Denmark The antagonistic activities of native Debaryomyces hansenii strains isolated from Danish Edited by: cheese brines were evaluated against contaminating molds in the dairy industry. Jian Zhao, Determination of chromosome polymorphism by use of pulsed-field -
Adaptive Response and Tolerance to Sugar and Salt Stress in the Food Yeast Zygosaccharomyces Rouxii
International Journal of Food Microbiology 185 (2014) 140–157 Contents lists available at ScienceDirect International Journal of Food Microbiology journal homepage: www.elsevier.com/locate/ijfoodmicro Review Adaptive response and tolerance to sugar and salt stress in the food yeast Zygosaccharomyces rouxii Tikam Chand Dakal, Lisa Solieri, Paolo Giudici ⁎ Department of Life Sciences, University of Modena and Reggio Emilia, Via Amendola 2, 42122, Reggio Emilia, Italy article info abstract Article history: The osmotolerant and halotolerant food yeast Zygosaccharomyces rouxii is known for its ability to grow and survive Received 14 November 2013 in the face of stress caused by high concentrations of non-ionic (sugars and polyols) and ionic (mainly Na+ cations) Received in revised form 18 April 2014 solutes. This ability determines the success of fermentation on high osmolarity food matrices and leads to spoilage of Accepted 4 May 2014 high sugar and high salt foods. The knowledge about the genes, the metabolic pathways, and the regulatory circuits Available online 25 May 2014 shaping the Z. rouxii sugar and salt-tolerance, is a prerequisite to develop effective strategies for fermentation con- Keywords: trol, optimization of food starter culture, and prevention of food spoilage. This review summarizes recent insights on Zygosaccharomyces rouxii the mechanisms used by Z. rouxii and other osmo and halotolerant food yeasts to endure salts and sugars stresses. Spoilage yeast Using the information gathered from S. cerevisiae as guide, we highlight how these non-conventional yeasts inte- Osmotolerance grate general and osmoticum-specific adaptive responses under sugar and salts stresses, including regulation of Halotolerance Na+ and K+-fluxes across the plasma membrane, modulation of cell wall properties, compatible osmolyte produc- Glycerol accumulation and retention tion and accumulation, and stress signalling pathways. -
Native Fish Species Boosting Brazilian's Aquaculture Development
Acta Fish. Aquat. Res. (2017) 5(1): 1-9 DOI 10.2312/ActaFish.2017.5.1.1-9 ORIGINAL ARTICLE Acta of Acta of Fisheries and Aquatic Resources Native fish species boosting Brazilian’s aquaculture development Espécies nativas de peixes impulsionam o desenvolvimento da aquicultura brasileira Ulrich Saint-Paul Leibniz Center for Tropical Marine Research, Fahrenheitstr. 6, 28359 Bremen, Germany *Email: [email protected] Recebido: 26 de fevereiro de 2017 / Aceito: 26 de março de 2017 / Publicado: 27 de março de 2017 Abstract Brazil’s aquaculture production has Resumo A produção da aquicultura do Brasil increased rapidly during the last two decades, aumentou rapidamente nas últimas duas décadas, growing from basically zero in the 1980s to over passando de quase zero nos anos 80 para mais de one half million tons in 2014. The development meio milhão de toneladas em 2014. O started with introduced international species such desenvolvimento começou através da introdução as shrimp, tilapia, and carp in a very traditional de espécies internacionais, tais como o camarão, a way, but has shifted to an increasing share of tilápia e a carpa, de uma forma muito tradicional, native species and focus on the domestic market. mas mudou com o aporte crescente de espécies Actually 40 % of the total production is coming nativas e foco no mercado interno. Atualmente, from native species such tambaquí (Colossoma 40% da produção total provém de espécies nativas macropomum), tambacu (hybrid from female C. como tambaqui (Colossoma macropomum), macropomum and male Piaractus mesopotamicus). tambacu (híbrido de C. macropomum e macho Other species like pirarucu (Arapaima gigas) or Piaractus mesopotamicus). -
Comparative Genomics of Biotechnologically Important Yeasts Supplementary Appendix
Comparative genomics of biotechnologically important yeasts Supplementary Appendix Contents Note 1 – Summary of literature on ascomycete yeasts used in this study ............................... 3 CUG-Ser yeasts ................................................................................................................................................................ 3 Other Saccharomycotina ............................................................................................................................................. 5 Taphrinomycotina ....................................................................................................................................................... 10 Note 2 – Genomes overview .................................................................................................11 Yeast culturing, identification, DNA and total RNA extraction ................................................................. 12 Genome sequencing and assembly ....................................................................................................................... 12 Transcriptome sequencing and assembly ......................................................................................................... 13 Table S1. Genome statistics ..................................................................................................................................... 14 Table S2. Annotation statistics .............................................................................................................................. -
A Viability Assessment of Commercial Aquaponics Systems in Iceland
A VIABILITY ASSESSMENT OF COMMERCIAL AQUAPONICS SYSTEMS IN ICELAND CHRISTOPHER WILLIAMS Supervisors: Magnus Thor Torfason Ragnheidur Thorarinsdottir Williams, Christopher Page 1 of 176 A Viability Assessment of Aquaponics in Iceland Christopher Williams 60 ECTS thesis submitted in partial fulfillment of a Magister Scientiarum degree in Environment and Natural Resources Supervisors: Magnus Thor Torfason Ragnheidur Thorarinsdottir Business Administration Faculty of Social Sciences at the University of Iceland School of Environment and Natural Resources University of Iceland. Reykjavik, June 2017 Williams, Christopher Page 2 of 176 A Viability Assessment of Aquaponics in Iceland This thesis is an MS thesis project for the MSc degree at the Faculty of Business Administration, University of Iceland, Faculty of Social Sciences. © 2017 Christopher Williams The dissertation may not be reproduced without the permission of the author. Printing: Háskólaprent Reykjavik, 2017 Williams, Christopher Page 3 of 176 ACKNOWLEDGEMENTS I would like to give the sincerest thanks to my advisors, Magnus Thor Torfason and Ragnheidur Thorarinsdottir for all their support and patience throughout this endeavor. They have opened so many opportunities for me in this journey and have given such incredible feedback and guidance. Without your help, none of this would be possible. The resources you have given me are invaluable and instrumental to completing my thesis. I would also like to give my thanks and gratitude to the wonderful staff and classmates I have had the pleasure of working with at the University. You have given me an enormous gift in letting me pursue work in something that I am personally passionate about and driven towards. I am so pleased to have had the pleasure of learning with you and sharing in ideas. -
Overseas Adventure Travel®
YOUR O.A.T. ADVENTURE TRAVEL PLANNING GUIDE® Fjord Cruise & Lapland: Norway, Finland & the Arctic 2022 Small Groups: 20-25 travelers—guaranteed! (average of 22) Overseas Adventure Travel ® The Leader in Personalized Small Group Adventures on the Road Less Traveled 1 Dear Traveler, For me, one of the joys of traveling is the careful planning that goes into an adventure—from the first spark of inspiration to hours spent poring over travel books about my dream destinations—and I can’t wait to see where my next journey will take me. I know you’re eager to explore the world, too, and our Fjord Cruise & Lapland itinerary described inside is an excellent way to start. As for Fjord Cruise & Lapland, thanks to your small group of 20-25 travelers (average 22) you can expect some unforgettable experiences. Here are a few that stood out for me: Gain insights into Sami and northern Lapland culture in Ivalo where a local guide will offer their perspective on the oppression of Europe’s last indigenous community during a visit to the Siida Museum. You’ll learn about the forced relocation of the Sami people in the 1800s and the challenges that face the community as they fight to preserve their time-honored customs. But the most moving stories of all are the ones you’ll hear directly from the local people. You’ll meet them, too, and hear their personal experiences when you visit the owners of a reindeer farm and learn about the important role they play in the Sami peoples’ daily lives. -
Technical Manual of Aquaponics Combined with Open Culture Adapting to Arid Regions
Technical Manual of Aquaponics Combined with Open Culture Adapting to Arid Regions Supervising Edition by Dr. Juan Ángel Larrinaga Mayoral Dr. Ilie Racotta Dimitrov and Dr. Satoshi Yamada Fukui Print Tottori/Japan 1 Technical Manual of Aquaponics Combined with Open Culture Adapting to Arid Regions Publication date: 21th May 2020 First impression of the first edition Supervising Edition: Dr. Juan Ángel Larrinaga Mayoral, Dr. Ilie Racotta Dimitrov and Dr. Satoshi Yamada Book Designe: Ms. Mina Yamada Printing and Publicaion : Fukui Print Miyanaga 21-4 Tottori City, Postal code, 680-0872, Japan Tel +81-857-37-4669 ISBN978-4-9907587-7-6 No part of this book may be reproduced or transmitted by any electronic or mechanical means, without the consent of its authors. Recycled paper is used. 2 Table of Contents Preface ....................................................................................................................................2 1. Guideline of Aquaponics Combined with Open Culture Using Saline Water .....................5 2. Technical Manual for Operation of Aquaponics Combined with Open Culture ..................19 2-1 Technical Manual for Tilapia Farming in the Recirculating Aquaculture System .....19 2-2 Technical Manual for Hydroponics Using Aquaculture Wastewater .................... 39 2-3 Technical Manual for Open Culture Using Aquaponics Wastewater ..................... 67 2-3-1 Technical Manual for Water and Soil Management of Open Culture ............. 67 2-3-2 Technical Manual for Chili Pepper Production ............................................ -
Genetically-Improved Tilapia Strains in Africa: Potential Benefits and Negative Impacts
Sustainability 2014, 6, 3697-3721; doi:10.3390/su6063697 OPEN ACCESS sustainability ISSN 2071-1050 www.mdpi.com/journal/sustainability Review Genetically-Improved Tilapia Strains in Africa: Potential Benefits and Negative Impacts Yaw B. Ansah 1,2, Emmanuel A. Frimpong 1,* and Eric M. Hallerman 1 1 Department of Fish and Wildlife Conservation, Virginia Polytechnic Institute and State University, 100 Cheatham Hall, Blacksburg, VA 24061, USA; E-Mails: [email protected] (Y.B.A.); [email protected] (E.M.H.) 2 Department of Agricultural and Applied Economics, Virginia Polytechnic Institute and State University, 208 Hutcheson Hall, Blacksburg, VA 24061, USA * Author to whom correspondence should be addressed; E-Mail: [email protected]; Tel.: +1-540-231-6880; Fax: +1-540-231-7580. Received: 27 December 2013; in revised form: 13 May 2014 / Accepted: 30 May 2014 / Published: 10 June 2014 Abstract: Two genetically improved tilapia strains (GIFT and Akosombo) have been created with Oreochromis niloticus (Nile tilapia), which is native to Africa. In particular, GIFT has been shown to be significantly superior to local African tilapia strains in terms of growth rate. While development economists see the potential for food security and poverty reduction in Africa from culture of these new strains of tilapia, conservationists are wary of potential ecological and genetic impacts on receiving ecosystems and native stocks of tilapia. This study reviews the history of the GIFT technology, and identifies potential environmental and genetic risks of improved and farmed strains and tilapia in general. We also estimate the potential economic gains from the introduction of genetically improved strains in Africa, using Ghana as a case country. -
Lessons from Past and Current Aquaculture Inititives in Selected
SUB-REGIONAL OFFICE FOR THE PACIFIC ISLANDS TCP/RAS/3301 LESSONS FROM PAST AND CURRENT AQUACULTURE INITIATIVES IN SELECTED PACIFIC ISLAND COUNTRIES Prepared by Pedro B. Bueno FAO Consultant ii Lessons learned from Pacific Islands Countries The designations employed and the presentation of material in this information product do not imply the expression of any opinion whatsoever on the part of the Food and Agriculture Organization of the United Nations (FAO) concerning the legal or development status of any country, territory, city or area or of its authorities, or concerning the delimitation of its frontiers or boundaries. The mention of specific companies or products of manufacturers, whether or not these have been patented, does not imply that these have been endorsed or recommended by FAO in preference to others of a similar nature that are not mentioned. The views expressed in this information product are those of the author(s) and do not necessarily reflect the views or policies of FAO. © FAO, 2014 FAO encourages the use, reproduction and dissemination of material in this information product. Except where otherwise indicated, material may be copied, downloaded and printed for private study, research and teaching purposes, or for use in non-commercial products or services, provided that appropriate acknowledgement of FAO as the source and copyright holder is given and that FAO’s endorsement of users’ views, products or services is not implied in any way. All requests for translation and adaptation rights, and for resale and other commercial use rights should be made via www. fao.org/contact-us/licence-request or addressed to [email protected]. -
The Food and Culture Around the World Handbook
The Food and Culture Around the World Handbook Helen C. Brittin Professor Emeritus Texas Tech University, Lubbock Prentice Hall Boston Columbus Indianapolis New York San Francisco Upper Saddle River Amsterdam Cape Town Dubai London Madrid Milan Munich Paris Montreal Toronto Delhi Mexico City Sao Paulo Sydney Hong Kong Seoul Singapore Taipei Tokyo Editor in Chief: Vernon Anthony Acquisitions Editor: William Lawrensen Editorial Assistant: Lara Dimmick Director of Marketing: David Gesell Senior Marketing Coordinator: Alicia Wozniak Campaign Marketing Manager: Leigh Ann Sims Curriculum Marketing Manager: Thomas Hayward Marketing Assistant: Les Roberts Senior Managing Editor: Alexandrina Benedicto Wolf Project Manager: Wanda Rockwell Senior Operations Supervisor: Pat Tonneman Creative Director: Jayne Conte Cover Art: iStockphoto Full-Service Project Management: Integra Software Services, Ltd. Composition: Integra Software Services, Ltd. Cover Printer/Binder: Courier Companies,Inc. Text Font: 9.5/11 Garamond Credits and acknowledgments borrowed from other sources and reproduced, with permission, in this textbook appear on appropriate page within text. Copyright © 2011 Pearson Education, Inc., publishing as Prentice Hall, Upper Saddle River, New Jersey, 07458. All rights reserved. Manufactured in the United States of America. This publication is protected by Copyright, and permission should be obtained from the publisher prior to any prohibited reproduction, storage in a retrieval system, or transmission in any form or by any means, electronic, mechanical, photocopying, recording, or likewise. To obtain permission(s) to use material from this work, please submit a written request to Pearson Education, Inc., Permissions Department, 1 Lake Street, Upper Saddle River, New Jersey, 07458. Many of the designations by manufacturers and seller to distinguish their products are claimed as trademarks. -
Genome and Transcriptome Sequencing of the Halophilic Fungus Wallemia Ichthyophaga: Haloadaptations Present and Absent Zajc Et Al
Genome and transcriptome sequencing of the halophilic fungus Wallemia ichthyophaga: haloadaptations present and absent Zajc et al. Zajc et al. BMC Genomics 2013, 14:617 http://www.biomedcentral.com/1471-2164/14/617 Zajc et al. BMC Genomics 2013, 14:617 http://www.biomedcentral.com/1471-2164/14/617 RESEARCH ARTICLE Open Access Genome and transcriptome sequencing of the halophilic fungus Wallemia ichthyophaga: haloadaptations present and absent Janja Zajc1†, Yongfeng Liu2†, Wenkui Dai2, Zhenyu Yang2, Jingzhi Hu2, Cene Gostinčar1*† and Nina Gunde-Cimerman1,3† Abstract Background: The basidomycete Wallemia ichthyophaga from the phylogenetically distinct class Wallemiomycetes is the most halophilic fungus known to date. It requires at least 10% NaCl and thrives in saturated salt solution. To investigate the genomic basis of this exceptional phenotype, we obtained a de-novo genome sequence of the species type-strain and analysed its transcriptomic response to conditions close to the limits of its lower and upper salinity range. Results: The unusually compact genome is 9.6 Mb large and contains 1.67% repetitive sequences. Only 4884 predicted protein coding genes cover almost three quarters of the sequence. Of 639 differentially expressed genes, two thirds are more expressed at lower salinity. Phylogenomic analysis based on the largest dataset used to date (whole proteomes) positions Wallemiomycetes as a 250-million-year-old sister group of Agaricomycotina. Contrary to the closely related species Wallemia sebi, W. ichthyophaga appears to have lost the ability for sexual reproduction. Several protein families are significantly expanded or contracted in the genome. Among these, there are the P-type ATPase cation transporters, but not the sodium/ hydrogen exchanger family.