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<I> Elaphomyces</I>
The genus Elaphomyces (Ascomycota, Eurotiales) a ribosomal DNA-based phylogeny and revised systematics of European 'deer truffles' Paz, A.; Bellanger, J. -M.; Lavoise, C.; Molia, A.; awrynowicz, M.; Larsson, E.; Ibarguren, I. O.; Jeppson, M.; Læssøe, Thomas; Sauve, M.; Richard, F.; Moreau, P. -A. Published in: Persoonia DOI: 10.3767/003158517X697309 Publication date: 2017 Document version Publisher's PDF, also known as Version of record Document license: CC BY-NC-ND Citation for published version (APA): Paz, A., Bellanger, J. -M., Lavoise, C., Molia, A., awrynowicz, M., Larsson, E., Ibarguren, I. O., Jeppson, M., Læssøe, T., Sauve, M., Richard, F., & Moreau, P. -A. (2017). The genus Elaphomyces (Ascomycota, Eurotiales): a ribosomal DNA-based phylogeny and revised systematics of European 'deer truffles'. Persoonia, 38, 197-239. https://doi.org/10.3767/003158517X697309 Download date: 02. okt.. 2021 Persoonia 38, 2017: 197–239 ISSN (Online) 1878-9080 www.ingentaconnect.com/content/nhn/pimj RESEARCH ARTICLE https://doi.org/10.3767/003158517X697309 The genus Elaphomyces (Ascomycota, Eurotiales): a ribosomal DNA-based phylogeny and revised systematics of European ‘deer truffles’ A. Paz1, J.-M. Bellanger2, C. Lavoise1, A. Molia3, M. Ławrynowicz4, E. Larsson5, I.O. Ibarguren6, M. Jeppson7, T. Læssøe8, M. Sauve2, F. Richard2, P.-A. Moreau9,* Key words Abstract Elaphomyces (‘deer truffles’) is one of the most important ectomycorrhizal fungal genera in temperate and subarctic forest ecosystems, but also one of the least documented in public databases. The current systemat- Astraeus ics are mainly based on macromorphology, and is not significantly different from that proposed by Vittadini (1831). Eurotiaceae Within the 49 species recognised worldwide, 23 were originally described from Europe and 17 of these were Eurotiomycetes described before the 20th century. -
Eight New<I> Elaphomyces</I> Species
VOLUME 7 JUNE 2021 Fungal Systematics and Evolution PAGES 113–131 doi.org/10.3114/fuse.2021.07.06 Eight new Elaphomyces species (Elaphomycetaceae, Eurotiales, Ascomycota) from eastern North America M.A. Castellano1, C.D. Crabtree2, D. Mitchell3, R.A. Healy4 1US Department of Agriculture, Forest Service, Northern Research Station, 3200 Jefferson Way, Corvallis, OR 97331, USA 2Missouri Department of Natural Resources, Division of State Parks, 7850 N. State Highway V, Ash Grove, MO 65604, USA 33198 Midway Road, Belington, WV 26250, USA 4Department of Plant Pathology, University of Florida, Gainesville, FL 32611 USA *Corresponding author: [email protected] Key words: Abstract: The hypogeous, sequestrate ascomycete genus Elaphomyces is one of the oldest known truffle-like genera.Elaphomyces ectomycorrhizae has a long history of consumption by animals in Europe and was formally described by Nees von Esenbeck in 1820 from Europe. hypogeous fungi Until recently most Elaphomyces specimens in North America were assigned names of European taxa due to lack of specialists new taxa working on this group and difficulty of using pre-modern species descriptions. It has recently been discovered that North America sequestrate fungi has a rich diversity of Elaphomyces species far beyond the four Elaphomyces species described from North America prior to 2012. We describe eight new Elaphomyces species (E. dalemurphyi, E. dunlapii, E. holtsii, E. lougehrigii, E. miketroutii, E. roodyi, E. stevemilleri and E. wazhazhensis) of eastern North America that were collected in habitats from Quebec, Canada south to Florida, USA, west to Texas and Iowa. The ranges of these species vary and with continued sampling may prove to be larger than we have established. -
Elaphomycetaceae, Eurotiales, Ascomycota) from Africa and Madagascar Indicate That the Current Concept of Elaphomyces Is Polyphyletic
Cryptogamie, Mycologie, 2016, 37 (1): 3-14 © 2016 Adac. Tous droits réservés Molecular analyses of first collections of Elaphomyces Nees (Elaphomycetaceae, Eurotiales, Ascomycota) from Africa and Madagascar indicate that the current concept of Elaphomyces is polyphyletic Bart BUYCK a*, Kentaro HOSAKA b, Shelly MASI c & Valerie HOFSTETTER d a Muséum national d’Histoire naturelle, département systématique et Évolution, CP 39, ISYEB, UMR 7205 CNRS MNHN UPMC EPHE, 12 rue Buffon, F-75005 Paris, France b Department of Botany, National Museum of Nature and Science (TNS) Tsukuba, Ibaraki 305-0005, Japan, email: [email protected] c Muséum national d’Histoire naturelle, Musée de l’Homme, 17 place Trocadéro F-75116 Paris, France, email: [email protected] d Department of plant protection, Agroscope Changins-Wädenswil research station, ACW, rte de duiller, 1260, Nyon, Switzerland, email: [email protected] Abstract – First collections are reported for Elaphomyces species from Africa and Madagascar. On the basis of an ITS phylogeny, the authors question the monophyletic nature of family Elaphomycetaceae and of the genus Elaphomyces. The objective of this preliminary paper was not to propose a new phylogeny for Elaphomyces, but rather to draw attention to the very high dissimilarity among ITS sequences for Elaphomyces and to the unfortunate choice of species to represent the genus in most previous phylogenetic publications on Elaphomycetaceae and other cleistothecial ascomycetes. Our study highlights the need for examining the monophyly of this family and to verify the systematic status of Pseudotulostoma as a separate genus for stipitate species. Furthermore, there is an urgent need for an in-depth morphological study, combined with molecular sequencing of the studied taxa, to point out the phylogenetically informative characters of the discussed taxa. -
Eight New Elaphomyces Species (Elaphomycetaceae, Eurotiales, Ascomycota) from Eastern North America
VOLUME 7 JUNE 2021 Fungal Systematics and Evolution PAGES 113–131 doi.org/10.3114/fuse.2021.07.06 Eight new Elaphomyces species (Elaphomycetaceae, Eurotiales, Ascomycota) from eastern North America M.A. Castellano1, C.D. Crabtree2, D. Mitchell3, R.A. Healy4 1US Department of Agriculture, Forest Service, Northern Research Station, 3200 Jefferson Way, Corvallis, OR 97331, USA 2Missouri Department of Natural Resources, Division of State Parks, 7850 N. State Highway V, Ash Grove, MO 65604, USA 33198 Midway Road, Belington, WV 26250, USA 4Department of Plant Pathology, University of Florida, Gainesville, FL 32611 USA *Corresponding author: [email protected] Key words: Abstract: The hypogeous, sequestrate ascomycete genus Elaphomyces is one of the oldest known truffle-like genera.Elaphomyces ectomycorrhizae has a long history of consumption by animals in Europe and was formally described by Nees von Esenbeck in 1820 from Europe. hypogeous fungi Until recently most Elaphomyces specimens in North America were assigned names of European taxa due to lack of specialists new taxa working on this group and difficulty of using pre-modern species descriptions. It has recently been discovered that North America sequestrate fungi has a rich diversity of Elaphomyces species far beyond the four Elaphomyces species described from North America prior to 2012. We describe eight new Elaphomyces species (E. dalemurphyi, E. dunlapii, E. holtsii, E. lougehrigii, E. miketroutii, E. roodyi, E. stevemilleri and E. wazhazhensis) of eastern North America that were collected in habitats from Quebec, Canada south to Florida, USA, west to Texas and Iowa. The ranges of these species vary and with continued sampling may prove to be larger than we have established. -
Taxonomy and Evolution of Aspergillus, Penicillium and Talaromyces in the Omics Era – Past, Present and Future
Computational and Structural Biotechnology Journal 16 (2018) 197–210 Contents lists available at ScienceDirect journal homepage: www.elsevier.com/locate/csbj Taxonomy and evolution of Aspergillus, Penicillium and Talaromyces in the omics era – Past, present and future Chi-Ching Tsang a, James Y.M. Tang a, Susanna K.P. Lau a,b,c,d,e,⁎, Patrick C.Y. Woo a,b,c,d,e,⁎ a Department of Microbiology, Li Ka Shing Faculty of Medicine, The University of Hong Kong, Hong Kong b Research Centre of Infection and Immunology, The University of Hong Kong, Hong Kong c State Key Laboratory of Emerging Infectious Diseases, The University of Hong Kong, Hong Kong d Carol Yu Centre for Infection, The University of Hong Kong, Hong Kong e Collaborative Innovation Centre for Diagnosis and Treatment of Infectious Diseases, The University of Hong Kong, Hong Kong article info abstract Article history: Aspergillus, Penicillium and Talaromyces are diverse, phenotypically polythetic genera encompassing species im- Received 25 October 2017 portant to the environment, economy, biotechnology and medicine, causing significant social impacts. Taxo- Received in revised form 12 March 2018 nomic studies on these fungi are essential since they could provide invaluable information on their Accepted 23 May 2018 evolutionary relationships and define criteria for species recognition. With the advancement of various biological, Available online 31 May 2018 biochemical and computational technologies, different approaches have been adopted for the taxonomy of Asper- gillus, Penicillium and Talaromyces; for example, from traditional morphotyping, phenotyping to chemotyping Keywords: Aspergillus (e.g. lipotyping, proteotypingand metabolotyping) and then mitogenotyping and/or phylotyping. Since different Penicillium taxonomic approaches focus on different sets of characters of the organisms, various classification and identifica- Talaromyces tion schemes would result. -
Collecting and Recording Fungi
British Mycological Society Recording Network Guidance Notes COLLECTING AND RECORDING FUNGI A revision of the Guide to Recording Fungi previously issued (1994) in the BMS Guides for the Amateur Mycologist series. Edited by Richard Iliffe June 2004 (updated August 2006) © British Mycological Society 2006 Table of contents Foreword 2 Introduction 3 Recording 4 Collecting fungi 4 Access to foray sites and the country code 5 Spore prints 6 Field books 7 Index cards 7 Computers 8 Foray Record Sheets 9 Literature for the identification of fungi 9 Help with identification 9 Drying specimens for a herbarium 10 Taxonomy and nomenclature 12 Recent changes in plant taxonomy 12 Recent changes in fungal taxonomy 13 Orders of fungi 14 Nomenclature 15 Synonymy 16 Morph 16 The spore stages of rust fungi 17 A brief history of fungus recording 19 The BMS Fungal Records Database (BMSFRD) 20 Field definitions 20 Entering records in BMSFRD format 22 Locality 22 Associated organism, substrate and ecosystem 22 Ecosystem descriptors 23 Recommended terms for the substrate field 23 Fungi on dung 24 Examples of database field entries 24 Doubtful identifications 25 MycoRec 25 Recording using other programs 25 Manuscript or typescript records 26 Sending records electronically 26 Saving and back-up 27 Viruses 28 Making data available - Intellectual property rights 28 APPENDICES 1 Other relevant publications 30 2 BMS foray record sheet 31 3 NCC ecosystem codes 32 4 Table of orders of fungi 34 5 Herbaria in UK and Europe 35 6 Help with identification 36 7 Useful contacts 39 8 List of Fungus Recording Groups 40 9 BMS Keys – list of contents 42 10 The BMS website 43 11 Copyright licence form 45 12 Guidelines for field mycologists: the practical interpretation of Section 21 of the Drugs Act 2005 46 1 Foreword In June 2000 the British Mycological Society Recording Network (BMSRN), as it is now known, held its Annual Group Leaders’ Meeting at Littledean, Gloucestershire. -
Francisca Rodrigues Dos Reis
Universidade do Minho Escola de Ciências Francisca Rodrigues dos Reis Effect of mycorrhization on Quercus suber L. tolerance to drought L. tolerance to drought cus suber Quer corrhization on y fect of m Ef Francisca Rodrigues dos Reis Governo da República Portuguesa UMinho|2018 janeiro de 2018 Universidade do Minho Escola de Ciências Francisca Rodrigues dos Reis Effect of mycorrhization on Quercus suber L. tolerance to drought Tese de Doutoramento Programa Doutoral em Biologia de Plantas Trabalho efetuado sob a orientação da Profª Doutora Teresa Lino-Neto da Profª Doutora Paula Baptista e do Prof. Doutor Rui Tavares janeiro de 2018 Acknowledgements “Em tudo obrigada!” Quando um dia me vi sentada num anfiteatro onde me descreviam a importância da criação de laços e que o sentimento de gratidão deveria estar implícito no nosso dia-a-dia, nunca pensar que seria o mote de início da minha tese de Doutoramento. Quanto mais não seja por ter sido um padre jesuíta a dizer-mo numa reunião de pais. Sim, é verdade! Para quem acompanhou toda a minha jornada sabe que não fiz um doutoramento tradicional, que não sou uma pessoa convencional e que não encaixo nas estatísticas de uma jovem investigadora! Tudo isto me foi proporcionado graças à pessoa mais humana e à orientadora mais presente que poderia ter escolhido. A Profa. Teresa foi muito mais do que uma simples orientadora. Foi quem me incentivou quando a moral andava baixa, foi a disciplinadora quando o entusiasmo era desmedido, foi a amiga nos momentos de desespero. Apanhar amostras sob neve e temperaturas negativas, acordar de madrugada sob olhar atento de veados, e lama, lama e mais lama, são algumas das recordações que vou guardar para a vida! Obrigada por me proporcionar experiências de uma vida! Ao Prof. -
New Xerophilic Species of Penicillium from Soil
Journal of Fungi Article New Xerophilic Species of Penicillium from Soil Ernesto Rodríguez-Andrade, Alberto M. Stchigel * and José F. Cano-Lira Mycology Unit, Medical School and IISPV, Universitat Rovira i Virgili (URV), Sant Llorenç 21, Reus, 43201 Tarragona, Spain; [email protected] (E.R.-A.); [email protected] (J.F.C.-L.) * Correspondence: [email protected]; Tel.: +34-977-75-9341 Abstract: Soil is one of the main reservoirs of fungi. The aim of this study was to study the richness of ascomycetes in a set of soil samples from Mexico and Spain. Fungi were isolated after 2% w/v phenol treatment of samples. In that way, several strains of the genus Penicillium were recovered. A phylogenetic analysis based on internal transcribed spacer (ITS), beta-tubulin (BenA), calmodulin (CaM), and RNA polymerase II subunit 2 gene (rpb2) sequences showed that four of these strains had not been described before. Penicillium melanosporum produces monoverticillate conidiophores and brownish conidia covered by an ornate brown sheath. Penicillium michoacanense and Penicillium siccitolerans produce sclerotia, and their asexual morph is similar to species in the section Aspergilloides (despite all of them pertaining to section Lanata-Divaricata). P. michoacanense differs from P. siccitol- erans in having thick-walled peridial cells (thin-walled in P. siccitolerans). Penicillium sexuale differs from Penicillium cryptum in the section Crypta because it does not produce an asexual morph. Its ascostromata have a peridium composed of thick-walled polygonal cells, and its ascospores are broadly lenticular with two equatorial ridges widely separated by a furrow. All four new species are xerophilic. -
Dimensions of Biodiversity
Dimensions of Biodiversity NATIONAL SCIENCE FOUNDATION CO-FUNDED BY 2010–2015 PROJECTS Introduction 4 Project Abstracts 2015 8 Project Updates 2014 30 Project Updates 2013 42 Project Updates 2012 56 Project Updates 2011 72 Project Updates 2010 88 FRONT COVER IMAGES A B f g h i k j C l m o n q p r D E IMAGE CREDIT THIS PAGE FRONT COVER a MBARI & d Steven Haddock f Steven Haddock k Steven Haddock o Carolyn Wessinger Peter Girguis e Carolyn g Erin Tripp l Lauren Schiebelhut p Steven Litaker b James Lendemer Wessinger h Marty Condon m Lawrence Smart q Sahand Pirbadian & c Matthew L. Lewis i Marty Condon n Verity Salmon Moh El-Naggar j Niklaus Grünwald r Marty Condon FIELD SITES Argentina France Singapore Australia French Guiana South Africa Bahamas French Polynesia Suriname Belize Germany Spain Bermuda Iceland Sweden Bolivia Japan Switzerland Brazil Madagascar Tahiti Canada Malaysia Taiwan China Mexico Thailand Colombia Norway Trinidad Costa Rica Palau United States Czech Republic Panama United Kingdom Dominican Peru Venezuela Republic Philippines Labrador Sea Ecuador Poland North Atlantic Finland Puerto Rico Ocean Russia North Pacific Ocean Saudi Arabia COLLABORATORS Argentina Finland Palau Australia France Panama Brazil Germany Peru Canada Guam Russia INTERNATIONAL PARTNERS Chile India South Africa China Brazil China Indonesia Sri Lanka (NSFC) (FAPESP) Colombia Japan Sweden Costa Rica Kenya United Denmark Malaysia Kingdom Ecuador Mexico ACKNOWLEDGMENTS Many NSF staff members, too numerous to We thank Mina Ta and Matthew Pepper for mention individually, assisted in the development their graphic design contribution to the abstract and implementation of the Dimensions of booklet. -
A Fossil Aspergillus from Baltic Amber
Mycol. Res. 109 (8): 956–960 (August 2005). f The British Mycological Society 956 doi:10.1017/S0953756205003497 Printed in the United Kingdom. A fossil Aspergillus from Baltic amber Heinrich DO¨RFELT1 and Alexander R. SCHMIDT2* 1 Martin-Luther-Universita¨t Halle, Institut fu¨r Geobotanik und Botanischer Garten, Neuwerk 21, D-06108 Halle/Saale, Germany. 2 Museum fu¨r Naturkunde, Humboldt-Universita¨t zu Berlin, Invalidenstr. 43, D-10115 Berlin, Germany. E-mail : [email protected] Received 17 May 2004; accepted 23 May 2005. A piece of Baltic amber (Tertiary, Eocene) contains an inclusion of a springtail (Collembola) which is overgrown by an Aspergillus species. The fossil fungus is described as A. collembolorum sp. nov. The excellent mode of preservation of the numerous conidiophores is remarkable and can be explained by sporulation in liquid resin. This is the second report of a fossil Aspergillus, the first being from Dominican amber. INTRODUCTION the insect was located close to the weathered surface. This allowed for microscopic investigation from both A springtail (Collembola), densely overgrown by the outer surface as well as in longitudinal-section. conidiophores of an Aspergillus species, was found in In order to protect the amber from oxidation and a piece of Baltic amber. The Baltic amber forests grew breakage the polished amber piece of 20 15 2mm during the Eocene epoch (50–35 Myr) in a temperate r r was embedded using polyester resin (GTS cured with to subtropical climate and consisted, apart from coni- addition of MEKP hardener Vosschemie, Uetersen) as fers, mainly of species in the Arecaceae and Fagaceae described by Hoffeins (2001). -
Bryn Tjader Mason Dentinger
BRYN T. M. DENTINGER [email protected] [email protected] dentingerlab.org dikaryon.wordpress.com @NHMUMycology Curator of Mycology Associate Professor Natural History Museum of Utah School of Biological Sciences 301 Wakara Way University of Utah Salt Lake City, UT 84108 257 South 1400 East, Rm. 201 Office: 801-585-1506 Salt Lake City, UT 84112 Lab: 801-587-5729 Office: LS207 Tel: 801-213-3695 Languages: English (native, preferred), Spanish (competent) ACADEMIC APPOINTMENTS 2016-current Associate Professor & Curator of Mycology, School of Biological Sciences & Natural History Museum of Utah, University of Utah (Salt Lake City, UT) 2014-2016 Senior Research Leader, Comparative Fungal Biology, Royal Botanic Gardens, Kew (London, UK) (managed three full-time junior and senior research staff) 2012-2014 Head of Mycology, Royal Botanic Gardens, Kew (London, UK) (managed eight full-time junior and senior research and curatorial staff) 2010-2012 Senior Researcher in Mycology, Royal Botanic Gardens, Kew (London, UK) 2011-2016 Honorary Lecturer, Institute of Biology, Environment and Rural Sciences, Aberystwyth University (Aberystwyth, Wales, UK) ACADEMIC TRAINING 2009-2010 Postdoctoral Research Associate, Center for Ecology and Evolutionary Biology, University of Oregon (Eugene, OR) 2007-2009 Postdoctoral Research Associate, Department of Natural History & Department of Ecology and Evolutionary Biology, Royal Ontario Museum, University of Toronto (Toronto, ON) 2007 Research Assistant, Minnesota County Biological Survey EDUCATION 2007 -
Enzymatic Potential of Bacteria and Fungi Isolates from the Sewage Sludge Composting Process
applied sciences Article Enzymatic Potential of Bacteria and Fungi Isolates from the Sewage Sludge Composting Process 1,2, 1,2 1,2, Tatiana Robledo-Mahón y , Concepción Calvo and Elisabet Aranda * 1 Institute of Water Research, University of Granada, Ramón y Cajal 4, 18071 Granada, Spain; [email protected] (T.R.-M.); [email protected] (C.C.) 2 Department of Microbiology, Pharmacy Faculty, University of Granada, Campus de Cartuja s/n, 18071 Granada, Spain * Correspondence: [email protected] Current address: Department of Agro-Environmental Chemistry and Plant Nutrition, y Faculty of Agrobiology, Food and Natural Resources, Czech University of Life Sciences, Kamýcká 129, 16500 Prague 6-Suchdol, Czech Republic. Received: 6 October 2020; Accepted: 2 November 2020; Published: 3 November 2020 Featured Application: Screening of suitable microorganisms adapted to environmental conditions are the challenges for the optimization of biotechnological processes in the current and near future. Some of the isolated microorganisms in this study possess biotechnological desirable features which could be employed in different processes, such as biorefinery, bioremediation, or in the food industry. Abstract: The aim of this study was the isolation and characterisation of the fungi and bacteria during the composting process of sewage sludge under a semipermeable membrane system at full scale, in order to find isolates with enzymatic activities of biotechnological interest. A total of 40 fungi were isolated and enzymatically analysed. Fungal culture showed a predominance of members of Ascomycota and Basidiomycota division and some representatives of Mucoromycotina subdivision. Some noticeable fungi isolated during the mesophilic and thermophilic phase were Aspergillus, Circinella, and Talaromyces.