bioRxiv preprint doi: https://doi.org/10.1101/559534; this version posted February 24, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Classification BIOLOGICAL SCIENCES: Biochemistry Structure-guided function discovery of an NRPS-like glycine beta- ine reductase for choline biosynthesis in fungi Yang Hai1, Arthur Huang2, Yi Tang1,2* 1Department of Chemical and Biomolecular Engineering, 2Department of Chemistry and Bio- chemistry, University of California, Los Angeles, California 90095, United States * Email:
[email protected] 1 bioRxiv preprint doi: https://doi.org/10.1101/559534; this version posted February 24, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. ABSTRACT Nonribosomal peptide synthetases (NRPS) and NRPS-like enzymes have diverse func- tions in primary and secondary metabolism. By using a structure-guided approach, we uncov- ered the function of an NRPS-like enzyme with unusual domain architecture, catalyzing two sequential two-electron reductions of glycine betaine to choline. Structural analysis based on homology model suggests cation-p interactions as the major substrate specificity determinant, which was verified using substrate analogs and inhibitors. Bioinformatic analysis indicates this NRPS-like glycine betaine reductase is highly conserved and widespread in fungi kingdom. Ge- netic knockout experiments confirmed its role in choline biosynthesis and maintaining glycine betaine homeostasis in fungi. Our findings demonstrate that the oxidative choline-glycine beta- ine degradation pathway can operate in a fully reversible fashion and provide new insights in understanding fungal choline metabolism.