5 Future Applications of Gmos
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Comparative Evaluation of Rice SSR Markers on Different Oryza Species Getachew Melaku1*, Shilai Zhang1 and Teklehaymanot Haileselassie2
ew Vol 1 | Issue 1 | Pages 38-48 Journal of Rice Research and Developments ISSN: 2643-5705 Research Article DOI: 10.36959/973/418 Comparative Evaluation of Rice SSR Markers on Different Oryza Species Getachew Melaku1*, Shilai Zhang1 and Teklehaymanot Haileselassie2 1Research Center of Perennial Rice Engineering and Technology in Yunnan, School of Agriculture, Yunnan University, Kunming 650091, China 2Institute of Biotechnology, College of Natural and Computational Sciences, Addis Ababa University, Ethiopia Abstract The growing number of rice microsatellite markers permit a comprehensive comparison of allelic variation among the markers developed using different methods, with diverse repeat motifs and at variable genomic regions. Under this study, comparison between a set of 67 microsatellite markers representing the whole (twelve) rice chromosomes was done over worldwide collections of nine species of the genus Oryza. These SSR markers were evaluated for the genetic parameters such as; number of alleles amplified per primers, observed heterozygosity, gene diversity, rare allelic frequency and Polymorphic Information Content (PIC) values. Among the microsatellite markers that were assessed in the present study, highest overall degree of genetic diversity was recorded on a dinucleotide repeat motif containing markers. Therefore, employing such very informative markers for future molecular characterization and diversity study of Oryza species is advisable. The unique alleles generated from those polymorphic markers could also have significant -
An Aesthetics of Rice
17 Journal of The Siam Society AN AESTHETICS OF RICE "It is necessary to build a hut to stay in while chasing birds. This duty falls on the women and children. If the birds alight they chase them away. One hears a cry of chasing away birds ... drifting down the midday air; it is a peculiar lonely sound. If the birds do not come to eat the rice, they spin cotton·and silk in order not to waste time at their work. The cotton that they spin is to be used for weaving monks' robes, in which they compete in craftsmanship on the day of presenting kathin robes ... When the birds come they use a plummet mad.e of a clump of earth with a long string to swing and throw far out. Children like this work, enjoying the task of throwing these at birds. If a younger woman goes to chase away birds she is usually accompanied by a younger brother. This is an opportunity for the young men to come and flirt, or if they are already sweethearts, they chase birds and eat together; this is a story of love in the fields." Phya Anuman Rajadhon The Life of the Farmer in Thailand, 1948. The importance of rice in Southeast Asian societies is evident from the vast mythology and literature on rice. Early mythology deals with rice as a given, a miracle crop abundant and available to people year round, the only effort exerted by them involved the daily gathering of it. Due to their own greedy attitudes concerning rice, human beings fell from this condition and had to work for their daily rice. -
Genetic Glass Ceilings Gressel, Jonathan
Genetic Glass Ceilings Gressel, Jonathan Published by Johns Hopkins University Press Gressel, Jonathan. Genetic Glass Ceilings: Transgenics for Crop Biodiversity. Johns Hopkins University Press, 2008. Project MUSE. doi:10.1353/book.60335. https://muse.jhu.edu/. For additional information about this book https://muse.jhu.edu/book/60335 [ Access provided at 2 Oct 2021 23:39 GMT with no institutional affiliation ] This work is licensed under a Creative Commons Attribution 4.0 International License. Genetic Glass Ceilings Transgenics for Crop Biodiversity This page intentionally left blank Genetic Glass Ceilings Transgenics for Crop Biodiversity Jonathan Gressel Foreword by Klaus Ammann The Johns Hopkins University Press Baltimore © 2008 The Johns Hopkins University Press All rights reserved. Published 2008 Printed in the United States of America on acid-free paper 987654321 The Johns Hopkins University Press 2715 North Charles Street Baltimore, Maryland 21218-4363 www.press.jhu.edu Library of Congress Cataloging-in-Publication Data Gressel, Jonathan. Genetic glass ceilings : transgenics for crop biodiversity / Jonathan Gressel. p. cm. Includes bibliographical references and index. ISBN 13: 978-0-8018-8719-2 (hardcover : alk. paper) ISBN 10: 0-8018-8719-4 (hardcover : alk. paper) 1. Crops—Genetic engineering. 2. Transgenic plants. 3. Plant diversity. 4. Crop improvement. I. Title. II. Title: Transgenics for crop biodiversity. SB123.57.G74 2008 631.5Ј233—dc22 20007020365 A catalog record for this book is available from the British Library. Special discounts are available for bulk purchases of this book. For more information, please contact Special Sales at 410-516-6936 or [email protected]. Dedicated to the memory of Professor Leroy (Whitey) Holm, the person who stimulated me to think differently. -
Gazetteer of Upper Burma and the Shan States. in Five
GAZETTEER OF UPPER BURMA AND THE SHAN STATES. IN FIVE VOLUMES. COMPILED FROM OFFICIAL PAPERS BY J. GEORGE SCOTT. BARRISTER-AT-LAW, C.I.E., M.R.A.S., F.R.G.S., ASSISTED BY J. P. HARDIMAN, I.C.S. PART II.--VOL. III. RANGOON: PRINTED BY THE SUPERINTENDENT, GOVERNMENT PRINTING, BURMA. 1901. [PART II, VOLS. I, II & III,--PRICE: Rs. 12-0-0=18s.] CONTENTS. VOLUME III. Page. Page. Page. Ralang 1 Sagaing 36 Sa-le-ywe 83 Ralôn or Ralawn ib -- 64 Sa-li ib. Rapum ib -- ib. Sa-lim ib. Ratanapura ib -- 65 Sa-lin ib. Rawa ib. Saga Tingsa 76 -- 84 Rawkwa ib. Sagônwa or Sagong ib. Salin ib. Rawtu or Maika ib. Sa-gu ib. Sa-lin chaung 86 Rawva 2 -- ib. Sa-lin-daung 89 Rawvan ib. Sagun ib -- ib. Raw-ywa ib. Sa-gwe ib. Sa-lin-gan ib. Reshen ib. Sa-gyan ib. Sa-lin-ga-thu ib. Rimpi ib. Sa-gyet ib. Sa-lin-gôn ib. Rimpe ib. Sagyilain or Limkai 77 Sa-lin-gyi ib. Rosshi or Warrshi 3 Sa-gyin ib -- 90 Ruby Mines ib. Sa-gyin North ib. Sallavati ib. Ruibu 32 Sa-gyin South ib. Sa-lun ib. Rumklao ib. a-gyin San-baing ib. Salween ib. Rumshe ib. Sa-gyin-wa ib. Sama 103 Rutong ib. Sa-gyu ib. Sama or Suma ib. Sai Lein ib. Sa-me-gan-gôn ib. Sa-ba-dwin ib. Saileng 78 Sa-meik ib. Sa-ba-hmyaw 33 Saing-byin North ib. Sa-meik-kôn ib. Sa-ban ib. -
03 the Progression of Perennial Rice Breeding and Genetics Research in China
03 THE PROGRESSION OF PERENNIAL RICE BREEDING AND GENETICS RESEARCH IN CHINA Shila Zhang1, Wensheng Wang2, Jing Zhang1, Zhang Ting2, Wangqi Huang1, Peng Xu 1, Dayun Tao 1, Binyin Fu2, Fengyi Hu1,3 1 Food Crops Research Institute, Yunnan Academy of Agricultural Sciences, Kunming, 650205 China 2 Crops Sciences Research Institute, China Academy of Agricultural Sciences, Beijing, 100018 China 3 Correspondence should be addressed to Fengyi Hu: [email protected] ABSTRACT Soil erosion is a worldwide problem of increasing concern, and perennial grain crops could be an important part of the solution. In Southeast Asia, upland rice ( O. sativa ) contributes to regional soil erosion problems because it is an annual crop grown on hilly lands. The perennial cultivars of upland rice could reduce soil erosion and meet the needs of subsistence farmers. From the viewpoint of breeding, O. longistaminata , with same genome, AA, similar to O. sativa , would be the most logical donor of genes for rhizome expression for perennial rice cultivar development, 27 PERENNIAL CROPS FOR FOOD SECURITY PROCEEDINGS OF THE FAO EXPERT WORKSHOP GENETICS AND BREEDING: STATE OF THE ART, GAPS AND O PPORTUNITIES several donor traits, such as rhizome and stolon have been employed for perenniality. Up to now, there are some results as following: 1) based on the fine mapping of the rhizome genes ( Rhz), via genomic library (BAC, Fosmid, rhizome cDNA library) construction and analysis, confirming the genetic regularity that the rhizome was controlled by two pairs of dominant complementary genes, Rhz2ࠊRhz3, and obtaining 15 rhizome locus and candidate functional genes; 2) the perennial rice breeding is on the way and some breeding lines that hold the rhizome genes were made. -
Performance, Economics and Potential Impact of Perennial Rice PR23 Relative to Annual Rice Cultivars at Multiple Locations in Yunnan Province of China
sustainability Article Performance, Economics and Potential Impact of Perennial Rice PR23 Relative to Annual Rice Cultivars at Multiple Locations in Yunnan Province of China Guangfu Huang 1,†, Shiwen Qin 1,†, Shilai Zhang 1,†, Xiaolin Cai 2, Shukang Wu 2, Jinrong Dao 2, Jing Zhang 1, Liyu Huang 1, Dome Harnpichitvitaya 3, Len J. Wade 4,* and Fengyi Hu 1,* 1 State Key Laboratory for Conservation and Utilization of Bio-Resources in Yunnan, Research Center of Perennial Rice Engineering and Technology in Yunnan, School of Agriculture, Yunnan University, Kunming 650500, China; [email protected] (G.H.); [email protected] (S.Q.); [email protected] (S.Z.); [email protected] (J.Z.); [email protected] (L.H.) 2 Yunnan Agricultural Technology Extension Centre, Gaoxinqu District, Kunming 650106, China; [email protected] (X.C.); [email protected] (S.W.); [email protected] (J.D.) 3 Department of Agronomy, Ubon Ratchathani Rajabhat University, Ubon Ratchathani 34000, Thailand; [email protected] 4 School of Agriculture and Food Sciences, The University of Queensland, Brisbane, QLD 4072, Australia * Correspondence: [email protected] (L.J.W.); [email protected] (F.H.) † These authors contributed equally to this paper. Received: 13 February 2018; Accepted: 27 March 2018; Published: 5 April 2018 Abstract: Perennial grain crops hold the promise of stabilizing fragile lands, while contributing grain and grazing in mixed farming systems. Recently, perennial rice was reported to successfully survive, regrow, and yield across a diverse range of environments in Southern China and Laos, with perennial rice PR23 being identified as a prime candidate for release to farmers. -
Characterization of Novel Rice Germplasm from West
CORE Metadata, citation and similar papers at core.ac.uk Provided by Texas A&M Repository CHARACTERIZATION OF NOVEL RICE GERMPLASM FROM WEST AFRICA AND GENETIC MARKER ASSOCIATIONS WITH RICE COOKING QUALITY A Dissertation by KARIM TRAORE Submitted to the Office of Graduate Studies of Texas A&M University in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY August 2005 Major Subject: Plant Breeding CHARACTERIZATION OF NOVEL RICE GERMPLASM FROM WEST AFRICA AND GENETIC MARKER ASSOCIATIONS WITH RICE COOKING QUALITY A Dissertation by KARIM TRAORE Submitted to the Office of Graduate Studies of Texas A&M University in partial fulfillment of the requirements for the degree of DOCTOR OF PHILOSOPHY Approved by: Co-Chairs of Committee, Anna M. McClung William L. Rooney Committee Members, Lloyd W. Rooney Edwin C. Price Robert G. Fjellstrom Head of Department, C.Wayne Smith August 2005 Major Subject: Plant Breeding iii ABSTRACT Characterization of Novel Rice Germplasm from West Africa and Genetic Marker Associations with Rice Cooking Quality. (August 2005) Karim Traore, B.S., Institut Polytechnique Rural de Katibougou; M.S., University of Nebraska-Lincoln Co-Chairs of Advisory Committee: Dr. Anna M. McClung Dr. William L. Rooney Genetic resource enhancement is the foundation of any good breeding program. Landraces from West Africa, interspecifics between Oryza sativa and Oryza glaberrima and improved lines from the West African Rice Development Association and other research centers were introduced to the Beaumont Rice Research center for in situ evaluation and characterization. Beside the introduction of seeds, milled samples were also introduced for grain chemistry analysis. -
Strategies, Advances, and Challenges in Breeding Perennial Grain Crops
sustainability Editorial Strategies, Advances, and Challenges in Breeding Perennial Grain Crops Timothy E. Crews 1,* and Douglas J. Cattani 2 ID 1 The Land Institute, 2440 E. Water Well Rd., Salina, KS 67401, USA 2 Department of Plant Science, University of Manitoba, 66 Dafoe Road, Winnipeg, MB R3T 2N2, Canada; [email protected] * Correspondence: [email protected]; Tel.: +1-785-823-5376 Received: 14 June 2018; Accepted: 16 June 2018; Published: 27 June 2018 Abstract: The development of new perennial crop species is gaining momentum as a promising approach to change the fundamental nature of ecosystem processes in agriculture. The ecological argument for perennial crops grown in polycultures is strong, but until recently, perennial herbaceous grain crops have been absent from agricultural landscape. This is not because perennial herbaceous species do not exist in nature—there are thousands of perennial grasses, legumes, and other broad leaf plants. Rather, for a variety of reasons, early farmers focused on cultivating and domesticating annuals, and the perennial herbs were largely ignored. Today, we have a tremendous opportunity to explore another agricultural path. Building on contemporary knowledge of plant biology and genetics that early farmers lacked, and using a rapidly expanding toolbox that includes sophisticated genomic and analytical approaches, we can develop viable perennial grain crops. These crops can then be used to assemble diverse agroecosystems that regenerate soils and capture other important ecosystem functions. Keywords: perennial; cereal; legume; pulse; oilseed; crop diversity; plant breeding; genetics; ecosystem services 1. Introduction Numerous papers have been published over the last decade describing predicted improvements in soil carbon balance, nutrient retention, soil water uptake efficiency, soil microbiome functions, and weed suppression, as annual crops that require soil disturbance and/or frequent exposure to maintain are replaced by perennial crops that require minimal soil disturbance or periods of exposure [1–7]. -
02 Perennial Rice: Challenges and Opportunities
PERENNIAL CROPS FOR FOOD SECURITY PROCEEDINGS OF THE FAO EXPERT WORKSHOP GENETICS AND BREEDING: STATE OF THE ART, GAPS AND O PPORTUNITIES 02 PERENNIAL RICE: CHALLENGES AND OPPORTUNITIES Erik J. Sacks University of Illinois, 1206 W. Gregory Dr., Urbana, IL 61801, USA. Email: [email protected] ABSTRACT As the human population continues to grow, and governments increasingly incentivize the migration of people from rural areas to cities, there is pressure to produce more food with fewer resources, including water, fertilizer, and especially labour. The development of high-yielding, perennial cultivars of rice could help meet the need for more food while reducing the inputs required. Domesticated Asian rice ( Oryza sativa ) was derived from perennial ancestors. Moreover, the traditional practice of ratoon cropping demonstrates that domesticated Asian rice retains some of its original perennial character, though this varies greatly by cultivar. However, with currently available cultivars, the yields of first ratoon crops are typically 40 percent or less of main crop yields and subsequent decreases make further cycles of ratooning uneconomical. Thus, the key research and development challenges for perennial rice are to improve ratoon yields, increase longevity, and improve drought tolerance with the goal of facilitating perennial rice regrowth and production beyond irrigated systems and into seasonally dry upland and rainfed lowland environments. Opportunities (in order of increasing difficulty and potential gain) for developing high-yielding cultivars of perennial rice 16 02 PERENNIAL RICE: CHALLENGES AND OPPORTUNITIES include: 1) breeding within domesticated Asian rice germplasm for improved ratooning ability and yield, 2) introgressing genes from the perennial, rhizomatous A-genome species O. -
Progress in Perennial Rice Breeding and Genetics
Progress in Perennial Rice Breeding and Genetics Fengyi Hu Food Crops Research Institute,YAAS 22 Sept. WaggaWagga, Australia • Soil erosion in uplands of Introduction southeast Asia has been a serious problem that led to the project of developing perennial upland rice at IRRI (IRRI 1989) The idea of developing perennial rice for erosion control Development of perennial upland rice has been proposed by several authors (IRRI 1989; Wagoner, 1990; Xiu, 1995; Schmit, 1996; Tao et al., 2000, 2001; Sacks, 2001;) The donor(s) for prerenniality? Cultivars of rice is usual annual food crop after long time domestication by farmer and breeding procedure by breeder or geneticist. The donor(s) for prerenniality? All over the world growth of O. sativa is Annual The donor(s) for prerenniality? • O. longistaminata is the logical donor for perenniality from its feature of rhizome as compared to other wild rice species (O. officinalis, O. rhizomatious, O. australiensis) Oryza species, the species complexes, chromosome number, genome group and distribution Oryza Species, the Species Complex, Chrom.,Genome group and Distribution Section Chromosome Genome Distribution Complex Number group Species Oryza O.sativa complex O.sativa L. 24 AA Worldwide O.nivara Sharma et Shastry 24 AA Tropical and Sub.Asia O.rufipogon Griff 24 AA Tropical and Sub.Asia O.meridionalis Ng 24 AmAm Tropical Australia O.glumaepatula Steud. 24 AglAgl South America O.glaberrima Steud. 24 AgAg Africa(mainly West) O.barthii A.Chev. 24 AgAg Africa O.longistaminata Chev.et Roehr 24 AlAl Africa O.officinalis complex O.officinalis Wall ex Watt 24 CC Tropical and Sub.Asia O.minuta Presl.et Presl. -
Contributions of Molecular Biology to Breeding and Issues Associated with Its Application in Developing Countries
The 7th J]RCAS International Symposium : Agricultural Technology Research for Sustainable Development in Developing Regions Contributions of Molecular Biology to Breeding and Issues Associated with Its Application in Developing Countries Ronald P. Cantrell and Gene P. Hettel* Abstract Biotechnology and its scientific base, molecular biology, which encompass a range of scientific applications involving living organisms, could provide the added boost necessary to help agricultural researchers accelerate progress in feeding hungry people in developing countries. Four areas are discussed: 1) the role of biotechnology and molecular biology in developing countries; 2) some accomplishments and basic strategies in molecular biology, particularly for rice; 3) bio- and food safety; and 4) intellectual property (IP). An historical perspective covers accomplishments at IRRI in tissue culture, marker-aided selection, characterizing biodiversity in genebanks, genetic engineering, and structural genomics. The next challenge is in the area of functional genomics, that is, to discover the functions of genes across the genomes of rice and other crops. To enhance efforts in gene discovery in rice, the creation of a public, well-characterized mutant bank through international collaboration.is proposed. Regarding bio- and food safety, IRRI and other international centers are committed to contributing good science that will help regulatory bodies make well informed decisions on the use of genetically modified organisms. Concerning IP, IRRI and other centers must promote the developing world's right to free access to all the resources and tools of the new biotechnology sciences. IP will be a particularly relevant issue for those involved in functional genomics because of the high likelihood that many new products will result from this research. -
The Ability of Hybrid and Inbred Rice to Produce Ratoon in Tidal Swampland
Indonesian Journal of Agricultural Science DOI: http//dx.doi.org/10.21082/ijas.v.19.n2.2018.p.83–89 Vol. 19 No. 2 December 2018: 83–89 THE ABILITY OF HYBRID AND INBRED RICE TO PRODUCE RATOON IN TIDAL SWAMPLAND Kemampuan Varietas Padi Hibrida dan Inbrida untuk Menghasilkan Ratun di Lahan Pasang Surut Susilawati1 and Bambang Sapta Purwoko2 1Central Kalimantan Assessment Institute for Agricultural Technology Jalan G. Obos km 5.5, PO BOX 122 Palangkaraya, 731111 Central Kalimantan, Indonesia Phone: +62 536320662 Fax: +62 536 320662 2Bogor Agricultural University Jalan Meranti Kampus IPB Dramaga Bogor, West Java, Indonesia Corresponding author: [email protected] Submitted 8 February 2018; Revised 30 October 2018; Accepted 12 November 2018 ABSTRACT ratun mulai keluar pada 5–6 hari setelah panen, dengan 2–4 daun per malai dan 5,5–26,0 anakan per rumpun. Rata-rata waktu panen tanaman ratun 69 hari setelah panen tanaman utama. Hasil gabah Tidal swampland in Indonesia is potential for cultivation of inbred and ratun padi hibrida lebih tinggi dibandingkan dengan varietas inbrida hybrid rice. However, rice cultivation in this land can be done only one dengan hasil rata-rata 75,2% terhadap tanaman utama. Berdasarkan time annually. Rice cultivation with ratoon system in this land might kriteria hasil gabah, 12 varietas dapat dikelompokkan menjadi tiga, increase production from both the main crop and their ratoon. The study yaitu potensi hasil tinggi (>2 t ha-1) yakni Hipa 3, Hipa 4, Hipa 5, aimed to evaluate the ability of hybrid and inbred rice to produce ratoon Maro, Rokan, Ciherang, dan Sintanur); potensi hasil medium (1–2 t and their grain yield in the tidal swampland of Central Kalimantan.