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论文及论著 论著 西藏两栖爬行动物——多样性与进化 论文(*通讯作者; #共同第一作者) 1. Chen Jin-M

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论文及论著 论著 2020 西藏两栖爬行动物——多样性与进化 论文(*通讯作者; #共同第一作者) 2020 1. Chen Jin-Min#, Prendinic E#, Wu YH#, Zhang BL, Suwannapoome C, Chen HM , Jin JQ, Lemmon ME, Lemmon AR, Stuarth BL, Raxworthy CJ, Robert W. Murphy RW, Yuan ZY*, Che J*. 2020. An integrative phylogenomic approach illuminates the evolutionary history of Old World tree frogs (Anura: Rhacophoridae). Molecular Phylogenetics and Evolution. 145(2020): 106742 2. Lu Chen-Qi, Chai J, Murphy RW, Che J*. 2020. Giant salamanders: Farmed yet endangered. Science. 41(2): 194–198 3. Wu Yun-He, Yan F, Stuart BL, Prendini E, Suwannapoom C, Dahn HA, Zhang BL, Cai HX, Xu YB, Jiang K, Chen HM, Lemmon AR, Moriarty Lemmon E, Raxworthy CJ, Orlov NL, Murphy RW, Che J*. 2020. A combined approach of mitochondrial DNA and anchored nuclear phylogenomics sheds light on unrecognized diversity, phylogeny, and historical biogeography of the torrent frogs, genus Amolops (Anura: Ranidae). Molecular Phylogenetics and Evolution. 148 (2020): 106789 4. Rahman Md Mizanur#, Chen JM#, Wu YH, Chen HM, Lwin YH, Murphy RW, Li GG*& Che J*. 2020. New country records for three species of frog from Myanmar including two genera (Nasutixalus and Oreolalax). Zootaxa. 4742(3): 531–542 2019 5. Kilunda Felista Kasyoka, Conradie W, Wasonga DV, Jin JQ, Peng MS, Murphy RW, Malonza PK* & Che J*. 2019. Revalidation and resurrection of Panaspis massaiensis (Angel, 1924) and the description of a new species of Panaspis Cope (Squamata: Scincidae) from south-eastern Kenya. Zootaxa . 4706(2): 255–274 6. Sang Ngoc Nguyen, Jin JQ, Vo BD, Nguyen LT,Zhou WW, Che J, Murphy RW* & Zhang YP. 2019. A new species of Acanthosaura Gray 1831 (Reptilia: Agamidae) from central Vietnam. Zootaxa . 4612(4): 555–565 7. Wu Yun-He#, Suwannapoom C#, Poyarkov Jr.NA, Pawangkhanant P, Xu K, Jin JQ, Murphy RW,and Che J*. 2019. A new species of the genus Xenophrys (Anura: Megophryidae) from northern Thailand. Zoological Research. 40(6): 564–574 8. Guo Peng*, Liu Q, Zhu F, Zhong GH, Che J, Wang P, Xie YL, Murphy RW, Malhotra A. 2019. Multilocus phylogeography of the brown-spotted pitviper Protobothrops mucrosquamatus (Reptilia: Serpentes: Viperidae) sheds a new light on the diversification pattern in Asia. Molecular Phylogenetics and Evolution.133(2019): 82–91 9. Gao Wei#, Sun YB#, Zhou WW#, Xiong ZJ#, Chen LN, Li H, Fu TT, Xu K, Xu W, Ma L, Chen YJ, Xiang XY, Zhou L, Zeng T, Zhang S, Jin JQ, Chen HM, Zhang GJ, Hillis DM*, Ji X*, Zhang YP*, Che J*. 2019. Genomic and transcriptomic investigations of the evolutionary transition from oviparity to viviparity. Proceedings of the National Academy of Sciences of the United States of America. 116(9): 3646–3655 10. Jiang Ke#, Wang K#, Wang YF, Li C, Che J*. 2019. A new species of the endemic Himalayan genus Liurana (Anura, Ceratobatrachidae) from southeastern Tibet, China, with comments on the distribution, reproductive biology, and conservation of the genus. Zoological Research. 40(3): 175–184 11. Nneji Lotanna Micah, Adeola AC, Yan F, Okeyoyin AO, Oladipo OC, Saidu Y, Samuel D, Nneji LC, Adeyi AO, Onadeko AB, Olagunju TE, Omotoso O, Oladipo SO, Iyiola OA, Usongo JY, Auta T, Usman AD, Abdullahi H, Ikhimiukor OO, Zhou WW, Jin JQ, Ugwumba OA, Ugwumba AAA, Peng MS, Murphy RW*, Che J*. 2019. Genetic variation and cryptic lineage diversity of the Nigerian red-headed rock agama Agama agama associate with eco-geographic zones. Current Zoology. 022019: 1–12 12. Poyarkov Jr Nikolay A*, Gorin VA, Zaw T, Kretova VD, Gogoleva SS, Pawangkhanant P, Che J. 2019. On the road to Mandalay: contribution to the Microhyla Tschudi, 1838 (Amphibia: Anura: Microhylidae) fauna of Myanmar with description of two new species. Zoological Research. 40(4): 244–276 13. Wang Kai*, Che J*, Lin SM, Deepak V, Aniruddha DR, Jiang K, Jin JQ, Chen HM, Siler CD. 2019. Multilocus phylogeny and revised classification for mountain dragons of the genus Japalura s.l. (Reptilia: Agamidae: Draconinae) from Asia. Zoological Journal of the Linnean Society. 185(1): 246–267 14. Wang Kai, Ci P, Jiang K, Weng SY, Siler CD, Che J *. 2019. Range extension of the rare agamid, Pseudocalotes austeniana (Annandale, 1908) (Reptilia, Sauria, Draconinae) in the East Himalaya, with comments on its ontogenetic shift. Check List. 15(3): 425–433 15. Wang Kai#, Jiang K#, Jing JQ, Liu X, Che J*. 2019. Confirmation of Trachischium guentheri (Serpentes: Colubridae) from Tibet, China, with description of Tibetan T. monticola. Zootaxa. 4688(1): 101–110 16. Wang Kai*, Jiang K, Ren JL, Zou DH, Wu JW, Che J, Siler CD. 2019. A new species of Dwarf Japalura sensu lato (Reptilia: Squamata: Agamidae) from the upper Mekong River in Eastern Tibet, China, with notes on morphological variation, distribution, and conservation of two congeners along the same river. Zootaxa. 4544(4): 505–522 17. Wang Kai*, Ren JL, Dong WJ, Jiang K, Shi JS, Siler CD, Che J*. 2019. A New Species of Plateau Pit Viper (Reptilia: Serpentes: Gloydius) from the Upper Lancang (=Mekong) Valley in the Hengduan Mountain Region, Tibet, China. Journal of Herpetology. 53(3): 224–236 18. Wang Kai*, Wu JW, Jiang K, Chen JM, Miao BF, Siler CD, Che J*. 2019. A new species of Mountain Dragon (Reptilia: Agamidae: Diploderma) from the D. dymondi complex in southern Sichuan Province, China. Zoological Research. 40(5): 456–465 19. Wu Yun-He#, Suwannapoom C#, Poyarkov, Jr. NA, Paawangkhanant P, Xu K, Jin JQ, Murphy RW, Che J*. 2019. A new species of the genus Xenophrys (Anura:Megophryidae) from northern Thailand. Zoological Research. 40(6): 564–574 20. Wu Yun-He#, Suwannapoom C#, Xu K, Chen JM, Jin JQ, Chen HM, Murphy RW, Che J*. 2019. A new species of the genus Raorchestes (Anura: Rhacophoridae) from Yunnan Province, China. Zoological Research. 40(6): 558–563 21.Yang Chun-Hua#, Fu TT#, Lan XQ, Zhang Y, Nneji LM, Murphy RW, Sun YB*, Che J*. 2019. Comparative Skin Histology of Frogs Reveals High-elevation Adaptation of the Tibetan Nanorana parkeri. Asian Herpetological Research. 10(2): 79–85 22. Yuan Zhi-Yong#*, Liu XL#, Wang K, Wang J, Chen JM, Jin JQ, Wei PF, Zhou JJ, Che J*. 2019. Nidirana chapaensis (Bourret, 1937), one additional anuran species for the amphibian fauna of China. Zootaxa. 4571(4): 580–588 23.Yuan Zhi-Yong#, Zhang BL#, Raxworthy CJ, Weisrock DW, Hime PM, Jin JQ, Lemmon EM, Lemmon AR, Holland SD, Kortyna ML, Zhou WW, Peng MS, . Che J*, Prendini E. 2019. Natatanuran frogs used the Indian Plate to step-stone disperse and radiate across the Indian Ocean. National Science Review. 6(1): 240–252 24. 高伟, 付婷婷, 车静*. 2019. 两栖爬行动物的高海拔适应性演化: 现状与展 望. 中国科学: 生命科学, 49 Gao W, Fu T T, Che J*. 2019. High-altitude adaptive evolution in amphibians and reptiles: Status and prospect (in Chinese). Sci Sin Vitae. 49, doi: 10.1360/N052018-00216 25. 王剀#，任金龙#,蒋珂，巫嘉伟，杨春华，徐会明，Kevin Messanger，雷开明， 余辉亮，杨敬元，Cameron D. Siler, 李家堂*，车静*. 2019. 龙蜥属Diploderma （爬行纲Reptilia：鬣蜥科Agamidae）部分物种的分类及分布记录修订.四川 动物. 38(5):481-495 2018 26. Chen Jin-Min#, Poyarkov Jr NA#, Suwannapoom C#, Lathrop A#, Wu YH, Zhou WW, Yuan ZY, Jin JQ, Chen HM, Liu HQ, Nguyen TQ, Nguyen SN, Duong TV, Eto K, Nishikawa K, Matsui M, Orlov NL, Stuart BL, Brown RM, Rowley JJL*, Murphy RW*, Wang YY*, Che J*. 2018. Large-scale phylogenetic analyses provide insights into unrecognized diversity and historical biogeography of Asian leaf-litter frogs, genus Leptolalax (Anura: Megophryidae). Molecular Phylogenetics and Evolution. 124: 162–171 27. Nneji Lotanna M, Adeola AC, Yan F, Okeyoyin AO, Oladipo OC, Olagunju TE, Omotoso O, Oladipo SO, Iyiola OA, Auta T, Usman AD, Abdullahi H, Peng MS, Jin JQ, Murphy RW, Ugwumba AAA*, Che J*. 2018. Cryptic Lineages of Nigerian Agama (Squamata: Agamidae) within the West African Radiation. Russian Journal of Herpetology. 25(2): 97–112 28. Poyarkov Jr Nikolay A*, Suwannapoom C, Pawangkhanant P, Aksornneam A, Duong TV, Korost DV, Che J. 2018. A new genus and three new species of miniaturized microhylid frogs from Indochina (Amphibia: Anura: Microhylidae: Asterophryinae). Zoological Research. 39(3): 130–157 29. Solovyeva Evgeniya N, Lebedev VS, Dunayev EA, Nazarov RA, Bannikova AA, Che J, Robert W. Murphy RW, Poyarkov NA. 2018. Cenozoic aridization in Central Eurasia shaped diversifification of toad-headed agamas (Phrynocephalus; Agamidae, Reptilia). PeerJ. 6:e4543 30. Sun Yan-Bo. 2018. FasParser2: a graphical platform for batch manipulation of tremendous amount of sequence data. Bioinformatics. 34(14): 2493–2495 31. Sun Yan-Bo#, Fu TT#, Jin JQ, Murphy RW, Hillis DM*, Zhang YP*, Che J*. 2018. Species groups distributed across elevational gradients reveal convergent and continuous genetic adaptation to high elevations. Proceedings of the National Academy of Sciences of the United States of America. 115(45): E10634–E10641 32. Turvey Samuel T *, Chen S, Tapley B, Wei G, Xie F, Yan F, Yang J, Liang ZQ, Tian HF, Wu MY, Okada S, Wang J, Lü JC, Zhou F, Papworth SK, Redbond J, Brown T, Che J, Cunningham AA*. 2018. Imminent extinction in the wild of the world's largest amphibian. Current Biology. 28(10): R592–R594 33. Wang Guo-Dong#, Zhang BL#, Zhou WW, Li YX, Jin JQ, Shao Y, Yang HC, Liu YH, Yan F, Chen HM, Jin L, Gao F, Zhang YG, Li HP, Mao BY, Murphy RW, Wake DB*, Zhang YP*, Che J*. 2018. Selection and environmental adaptation along a path to speciation in the Tibetan frog Nanorana parkeri. Proceedings of the National Academy of Sciences of the United States of America. 115(22): E5056–E5065 34. Wang Kai*, Jiang K, Deepak V, Abhijit D, Hou M, Che J, Siler CD. 2018. On the Occurrences of Japalura kumaonensis and Japalura tricarinata (Reptilia: Sauria: Draconinae) in China.
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    Zootaxa 3881 (6): 532–548 ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2014 Magnolia Press ISSN 1175-5334 (online edition) http://dx.doi.org/10.11646/zootaxa.3881.6.3 http://zoobank.org/urn:lsid:zoobank.org:pub:1DA57B50-9CDF-4618-B155-7D6AE12EAA31 The phylogenetic position and taxonomic status of the Rainbow Tree Snake Gonyophis margaritatus (Peters, 1871) (Squamata: Colubridae) XIN CHEN1,2, ALEXANDER D. McKELVY1,2, L. LEE GRISMER3, MASAFUMI MATSUI4, KANTO NISHIKAWA4 & FRANK T. BURBRINK1,2 1Department of Biology, The College of Staten Island, The City University of New York, 2800 Victory Blvd., Staten Island, NY 10314, USA. E-mail: [email protected] 2Department of Biology, The Graduate School and University Center, The City University of New York, 365 Fifth Ave., NY, NY 10016, USA 3Department of Biology, La Sierra University, 4500 Riverwalk Pkwy., Riverside, California 92515 USA 4Graduate School of Human and Environmental Studies, Kyoto University, Kyoto 606–8501, JAPAN Abstract Molecular phylogenies have provided strong evidence for clarifying the taxonomy of groups with ambiguous morpholog- ical traits, thus avoiding potentially misleading conclusions based on evolutionary convergence of these traits. For snakes, established molecular databases along with new sequences from rare species allows us to estimate phylogenies, to clarify the phylogenetic relationships and test the monophyly of most taxonomic groups. Using one mitochondrial gene and five nuclear loci, we evaluate the taxonomic status of a rare Southeast Asian serpent, the Rainbow Tree Snake Gonyophis mar- garitatus (Squamata: Colubridae) by inferring a molecular phylogeny of 101 snake species. Both maximum likelihood and time- calibrated Bayesian inference phylogenies demonstrate that G.
  • From Asia-Pacific to Indo-Pacific Significance, Implementation and Challenges

    From Asia-Pacific to Indo-Pacific Significance, Implementation and Challenges

    SWP Research Paper Felix Heiduk and Gudrun Wacker From Asia-Pacific to Indo-Pacific Significance, Implementation and Challenges Stiftung Wissenschaft und Politik German Institute for International and Security Affairs SWP Research Paper 9 July 2020, Berlin Abstract ∎ More and more states and regional organisations employ the term “Indo- Pacific”. It is increasingly supplanting the previously common term, “Asia-Pacific”. In Europe, only France has so far presented its own “Indo- Pacific” concept. ∎ The term “Indo-Pacific” is used to refer to various, sometimes divergent, concepts. These in turn are based on very different ideas on regional order. What they all have in common is the reference to the importance of a rules-based international order. ∎ “Indo-Pacific” is a political term and therefore neither purely descriptive nor value-neutral. In particular, the Trump administration’s “Free and Open Indo-Pacific” concept aims to contain China and is thus an expres- sion of the growing strategic rivalry between Washington and Beijing. In Beijing, “Indo-Pacific” is primarily understood as a U.S.-led containment strategy directed against China. ∎ Other actors, for example ASEAN or India, emphasise aspects such as economic prosperity, connectivity and multilateral cooperation in their Indo-Pacific concepts. ∎ The EU and its member states are under increasing pressure from Washington to commit themselves directly or indirectly to the “Indo- Pacific” – and thus, from a U.S. perspective, for Washington and against Beijing. In their deliberations, Europeans should not succumb to this zero-sum logic. ∎ The EU and its member states have at their disposal three (ideal type) approaches: “equidistance”, “alignment” and “autonomy”.