(Pcbs) in the Bio-Geochemistry of Oceans
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TNP SOK 2011 Internet
GARDEN ROUTE NATIONAL PARK : THE TSITSIKAMMA SANP ARKS SECTION STATE OF KNOWLEDGE Contributors: N. Hanekom 1, R.M. Randall 1, D. Bower, A. Riley 2 and N. Kruger 1 1 SANParks Scientific Services, Garden Route (Rondevlei Office), PO Box 176, Sedgefield, 6573 2 Knysna National Lakes Area, P.O. Box 314, Knysna, 6570 Most recent update: 10 May 2012 Disclaimer This report has been produced by SANParks to summarise information available on a specific conservation area. Production of the report, in either hard copy or electronic format, does not signify that: the referenced information necessarily reflect the views and policies of SANParks; the referenced information is either correct or accurate; SANParks retains copies of the referenced documents; SANParks will provide second parties with copies of the referenced documents. This standpoint has the premise that (i) reproduction of copywrited material is illegal, (ii) copying of unpublished reports and data produced by an external scientist without the author’s permission is unethical, and (iii) dissemination of unreviewed data or draft documentation is potentially misleading and hence illogical. This report should be cited as: Hanekom N., Randall R.M., Bower, D., Riley, A. & Kruger, N. 2012. Garden Route National Park: The Tsitsikamma Section – State of Knowledge. South African National Parks. TABLE OF CONTENTS 1. INTRODUCTION ...............................................................................................................2 2. ACCOUNT OF AREA........................................................................................................2 -
Marine Fishes of the Azores: an Annotated Checklist and Bibliography
MARINE FISHES OF THE AZORES: AN ANNOTATED CHECKLIST AND BIBLIOGRAPHY. RICARDO SERRÃO SANTOS, FILIPE MORA PORTEIRO & JOÃO PEDRO BARREIROS SANTOS, RICARDO SERRÃO, FILIPE MORA PORTEIRO & JOÃO PEDRO BARREIROS 1997. Marine fishes of the Azores: An annotated checklist and bibliography. Arquipélago. Life and Marine Sciences Supplement 1: xxiii + 242pp. Ponta Delgada. ISSN 0873-4704. ISBN 972-9340-92-7. A list of the marine fishes of the Azores is presented. The list is based on a review of the literature combined with an examination of selected specimens available from collections of Azorean fishes deposited in museums, including the collection of fish at the Department of Oceanography and Fisheries of the University of the Azores (Horta). Personal information collected over several years is also incorporated. The geographic area considered is the Economic Exclusive Zone of the Azores. The list is organised in Classes, Orders and Families according to Nelson (1994). The scientific names are, for the most part, those used in Fishes of the North-eastern Atlantic and the Mediterranean (FNAM) (Whitehead et al. 1989), and they are organised in alphabetical order within the families. Clofnam numbers (see Hureau & Monod 1979) are included for reference. Information is given if the species is not cited for the Azores in FNAM. Whenever available, vernacular names are presented, both in Portuguese (Azorean names) and in English. Synonyms, misspellings and misidentifications found in the literature in reference to the occurrence of species in the Azores are also quoted. The 460 species listed, belong to 142 families; 12 species are cited for the first time for the Azores. -
Molecular Clocks Provide New Insights Into the Evolutionary History of Galeichthyine Sea Catfishes
ORIGINAL ARTICLE doi:10.1111/j.1558-5646.2009.00640.x MOLECULAR CLOCKS PROVIDE NEW INSIGHTS INTO THE EVOLUTIONARY HISTORY OF GALEICHTHYINE SEA CATFISHES Ricardo Betancur-R.1,2 and Jonathan W. Armbruster1 1Department of Biological Sciences, Auburn University, 331 Funchess Hall, Auburn, Alabama 36849 2E-mail: [email protected] Received August 28, 2008 Accepted January 7, 2009 Intercontinental distributions in the southern hemisphere can either be the result of Gondwanan vicariance or more recent transoceanic dispersal. Transoceanic dispersal has come into vogue for explaining many intercontinental distributions; however, it has been used mainly for organisms that can float or raft between the continents. Despite their name, the Sea Catfishes (Ariidae) have limited dispersal ability, and there are no examples of nearshore ariid genera with a transoceanic distribution except for Galeichthys where three species occur in southern Africa and one in the Peruvian coast. A previous study suggested that the group originated in Gondwana, and that the species arrived at their current range after the breakup of the supercontinent in the Early Cretaceous. To test this hypothesis, we infer molecular phylogenies (mitochondrial cytochrome b, ATP synthase 8/6, 12S, and 16S; nuclear rag2; total ∼4 kb) and estimate intercontinental divergence via molecular clocks (penalized-likelihood, Bayesian relaxed clock, and universal clock rates in fishes). Age ranges for cladogenesis of African and South American lineages are 15.4–2.5 my, far more recent than would be suggested by Gondwanan vicariance; thus, the distribution of galeichthyines must be explained by dispersal or more recent vicariant events. The nested position of the Peruvian species (Galeichthys peruvianus) within the African taxa is robust, suggesting that the direction of the dispersal was from Africa to South America. -
Three-Dimensional Characterisation of Osteocyte Volumes at Multiple Scales, and Its Relationship with Bone Biology and Genome Evolution in Ray-Finned Fishes
bioRxiv preprint doi: https://doi.org/10.1101/774778; this version posted September 19, 2019. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. PREPRINT Three-dimensional characterisation of osteocyte volumes at multiple scales, and its relationship with bone biology and genome evolution in ray-finned fishes Donald Davesne1,*, Armin D. Schmitt1, Vincent Fernandez2,3, Roger B. J. Benson1, Sophie Sanchez2,4 1 Department of Earth Sciences, University of Oxford, United Kingdom 2 European Synchrotron Radiation Facility, Grenoble, France 3 Imaging and Analysis Centre, Natural History Museum, London, United Kingdom 4 Subdepartment of Evolution and Development, Department of Organismal Biology, Uppsala University, Sweden * Corresponding author: [email protected]; [email protected] Abstract Osteocytes, cells embedded within the bone mineral matrix, inform on key aspects of vertebrate biology. In particular, a relationship between volumes of the osteocytes and bone growth and/or genome size has been proposed for several tetrapod lineages. However, the variation in osteocyte volume across different scales is poorly characterised, and mostly relies on incomplete, two-dimensional information. In this study, we propose to characterise the variation of osteocyte volumes in ray-finned fishes (Actinopterygii), a clade including more than half of modern vertebrate species in which osteocyte biology is poorly known. We use X-ray synchrotron micro computed tomography (SRµCT) to achieve a three-dimensional visualisation of osteocytes and direct measurement of their volumes. -
The Feeding Habits of Gafftopsail Catfish Bagre Marinus(Ariidae)
Hidrobiológica 2003, 13 (2): 119-126 The feeding habits of gafftopsail catfish Bagre marinus (Ariidae) in Paraiso Coast,Tabasco, Mexico Los hábitos de alimentación del bagre Bagre marinus (Ariidae) en Costa Paraíso,Tabasco, México Manuel Mendoza-Carranza Depto. de Pesquerías Artesanales. El Colegio de la Frontera Sur, unidad Villahermosa, A.P. 1042, Adm. Correos No. 2, Atasta, Villahermosa, Tabasco, México. Mendoza-Carranza M. 2003. The feeding habits of gafftopsail catfish Bagre marinus (Ariidae) Hidrobiológica 13 (2): 119-126. ABSTRACT The gafftopsail catfish (Bagre marinus) is one of the species of most importance to fisheries in the Gulf of Mexico, particularly in the coastal region of Tabasco State, where it is captured abundantly almost all year round in shallow coastal zones. Although, there is neither ecological nor biological information about this species in the coastal zone of Tabasco State. This study aims to describe the feeding habits of gafftopsail catfish. Seasonal changes in the diet and its relation with reproductive period will also be discussed. Analyzes of stomachs contents of 430 individuals (97 females and 68 males for dry season, 100 females and 38 males for rainy season and 83 females and 44 males for nortes season) obtained from two commercial landings located in the Chiltepec municipality, Paraiso, Tabasco along one year (May 1996 to April 1997). The numerical percentage (%N), weight percentage (%W) and frequency occurrence indexes were calculated for the groups preys. These three indexes were comparing with the Kendall concordance coefficient, concluding that three indexes provide the same information about importance of prey inside diet, using the %F for posteriors analysis. -
Siluriformes: Ariidae) As Inferred from Mitochondrial, Nuclear, and Morphological Evidence
Available online at www.sciencedirect.com MOLECULAR PHYLOGENETICS W ScienceDirect AND EVOLUTION ELSEVIER Molecular Phylogenetics and Evolution 45 (2007) 339-357 www.elsevier.com/locate/ympev Systematics and biogeography of New World sea catfishes (Siluriformes: Ariidae) as inferred from mitochondrial, nuclear, and morphological evidence Ricardo Betancur-R. ^''''*, Arturo Acero P. '^, Eldredge Bermingham ^, Richard Cooke ^ ^ Department of Biological Sciences, Auburn University, 331 Funchess Hall, Auburn, AL 36849, USA Smithsonian Tropical Research Institute, Apartado 2072, Balboa, Panama Universidad Nacional de Colombia (Instituto de Ciencias Naturales), Cerro Punta Betín, Apartado 1016 (INVEMAR), Santa Marta, Colombia Received 23 December 2006; accepted 15 February 2007 Available online 28 February 2007 Abstract Ariid or sea catfishes include around 150 species that inhabit marine, brackish, and freshwater environments along world's tropical and subtropical continental shelves. Phylogenetic relationships for 46 New World and three Old World species of ariids were hypothesized using maximum parsimony and Bayesian inference reconstruction criteria on 2842 mitochondrial (cytochrome b, ATP synthase 8 and 6, ribosomal 12S and 16S) and 978 nuclear (rag2) nucleotide sites. The molecular topologies were compared to a previously compiled morphological data- set that was expanded herein to a total of 25 ariid species and 55 characters. Mitochondrial data yielded clades highly resolved at subfamilial, generic, and intrageneric levels. Nuclear rag2 reconstructions showed poor resolution at supra- and intrageneric levels, but provided support for the monophyly of most genera (except Ariopsis and Cathorops) as well as for the subfamihal clades. The hypothesized phylogeny derived from the morphological data was congruent with the molecular topologies at infrafamilial and generic levels. -
Siluriformes: Ariidae), from the Atlantic Coast of South America, with Insights Into the Demography and Biogeography of the Species
Neotropical Ichthyology, 14(2): e150184, 2016 Journal homepage: www.scielo.br/ni DOI: 10.1590/1982-0224-20150184 Published online: 27 June 2016 (ISSN 1982-0224) Early Pleistocene lineages of Bagre bagre (Linnaeus, 1766) (Siluriformes: Ariidae), from the Atlantic coast of South America, with insights into the demography and biogeography of the species Wemerson C. da Silva1, Alexandre P. Marceniuk1,2, João Braullio L. Sales1,3 and Juliana Araripe1 Coastal and marine environments are characterized by a lack of evident physical barriers or geographic isolation, and it may be difficult to understand how divergence can arise and be sustained in marine environments. The identification of ‘soft’ barriers is a crucial step towards the understanding of gene flow in marine environments. The marine catfishes of the family Ariidae are a demersal group with restricted migratory behavior, no pelagic larval stages, and mechanisms of larval retention, representing a potentially useful model for the understanding of historical processes of allopatric speciation in the marine environment. In the present study, two lineages of the Coco sea catfish, Bagre bagre, were recognized from their complete segregation at both mitochondrial and morphological levels. One lineage is distributed between Venezuela and the northern coast of Brazil, including the semiarid northeast coast, while the second lineage is found on the eastern coast of Brazil, including the humid northeast coast. Based on distribution area, habitats preference, and genetic variability, inferences are made in relation to biogeography and demography of lineages in Atlantic coast of South America. Ambientes marinhos costeiros são caracterizados pela falta de barreiras físicas evidentes e ausência de isolamento geográfico, sendo difícil compreender como diferentes linhagens podem surgir e ser mantidas nestes ambientes. -
Fish Afunctional Morphological Approach to the Cranial Ontogeny Ofthe African Catfish, Clarias Gariepinus (Siluriformes,Clariidae)
Faculteit Academiejaar Wetenschappen 1997/1998 UNIVERSITEIT GENT On how a larva becomes an adult catfish a functional morphological approach to the cranialontogeny of the African catfish, Clarias gariepinus (Siluriformes, Clariidae) Van larvale tot adulte katvis eenfunctioneel-morfologische benadering vande craniale ontogenie van de Afrikaanse katvis, Clarias gariepinus (Siluriformes, Clariidae) PART I TEXT Dominique Adriaens Thesis submitted to obtain the degree of Rector: Prof. Dr. ir. J. Willems Doctor in Sciences (Biology) Decaan: Prof. Dr. W. De Breuck Proefschrift voorgedragen tot het bekomen van de graad van Doctor in de Wetenschappen (Biologie) Promotor: Prof. Dr. W. Verraes Contents i Acknowledgements - Dankwoord Part I - General introduction Chapter I.1 – History and aims..................................................................................................................................1 I.1.1 - HISTORY ............................................................................................................................................ 1 I.1.2 - AIMS ................................................................................................................................................ 2 Chapter I.2 - Material and methods.........................................................................................................................4 I.2.1 - ONTOGENETIC SERIES OF CLARIAS GARIEPINUS ............................................................................... 4 I.2.2 - MORPHOLOGICAL DESCRIPTIONS..................................................................................................... -
The Body Composition of Low Value Fish and Their Preparation Into a Higher Value Snack Food
Western IndianBODY Ocean COMPOSITION J. Mar. OFSci. LOW Vol. VALUE 7, No. FISH 1, &pp. PREPARATION 111–117, 2008 INTO A HIGHER VALUE SNACK FOOD 111 © 2008 WIOMSA The Body Composition of Low Value Fish and their Preparation into a Higher Value Snack Food Oduor-Odote, P. M and Kazungu, J.M. Kenya Marine and Fisheries Research Institute, P.O. Box 81651, Mombasa, Kenya Key words: Galeichthys feliceps, Trichurus lepturus, fish snack, body composition Abstract—In Kenya, marine catfish (Galeichthys feliceps) and ribbonfish (Trichurus lepturus) are both under- utilized species from the prawn fishery where they occur as by-catch or discards. They represent a potentially valuable source of protein mince. The current study assessed the feasibility of increasing the value of this by-catch by testing its suitability to the production of snack foods which was prepared with locally available flour from rice, wheat and maize. The ratio of fish mince to flour, the carbohydrate component, was tested in the snack foods at rations of 2.5:1; 2:1 and 1:1. An untrained taste panel using a hedonic scale of 1 to 9 tested preference. Protein content, fat, moisture, amino acid and fatty acid composition are reported and both indicate the nutritional suitability of the selected fish. The overall order for preference was ribbonfish with rice then ribbonfish with wheat, catfish with rice, ribbonfish with maize and catfish with wheat. Rice was preferred for value addition and ribbonfish was the preferred fish in the formulations. INTRODUCTION flour in the fish mince protein isolate and making dried products. -
The Diets of Fish in Three South-Western Cape Estuarine Systems
S. Afr. J. Zoo!. 1989,24(3) The diets of fish in three south-western Cape estuarine systems B.A. Bennett Zoology Department and Marine Biology Research Institute, University of Cape Town, Rondebosch, 7700 Republic of South Africa Received 26 September 1988; accepted 28 November 1988 The stomach contents of 2756 fish of 14 species taken by seine and gill netting in the Bot River, Kleinmond and Palmiet estuaries on the south-western Cape coast of South Africa were examined. The small juveniles of all species consumed primarily zooplankton before switching to their adult diets. Seven of the species, Atherina breviceps, Caffrogobius multifasciatus, Clinus spatulatus, Galeichthys feliceps, Gilchnstella aestuaria, Monodactylus falciformis, Psammogobius knysnaensis and Syngnathus acus were carnivores which fed primarily on invertebrates; two, Hyporhamphus capensis and Sarpa salpa, were herbivores; three, Lithganathus lithognathus, Rhabdosargus globiceps and R. holubi were omnivores and two, Lichia amia and Pomatomus saltatrix were piscivores. Within these trophic groupings variations in the diets of fish from the different estuaries were noted as were changes in diet with season. Differences between estuaries were ascribed primarily to food availability and differences in the size ranges of the fish species sampled in them. Differences in the diet between size classes were primarily due to an increasing ability to handle larger food items. The few seasonal differences in diet that occurred appeared not to conform to any observable pattern. Twelve food categories provided > 1 % of food consumed by at least one species and each of these categories was represented in the guts of between 9 and 14 of the fish species examined. -
Zootaxa, Checklist of Catfishes, Recent and Fossil
ZOOTAXA 1418 Checklist of catfishes, recent and fossil (Osteichthyes: Siluriformes), and catalogue of siluriform primary types CARL J. FERRARIS, JR. Magnolia Press Auckland, New Zealand CARL J. FERRARIS, JR. Checklist of catfishes, recent and fossil (Osteichthyes: Siluriformes), and catalogue of siluriform primary types (Zootaxa 1418) 628 pp.; 30 cm. 8 March 2007 ISBN 978-1-86977-058-7 (hardback) ISBN 978-1-86977-059-4 (Online edition) FIRST PUBLISHED IN 2007 BY Magnolia Press P.O. Box 41-383 Auckland 1346 New Zealand e-mail: [email protected] http://www.mapress.com/zootaxa/ © 2007 Magnolia Press All rights reserved. No part of this publication may be reproduced, stored, transmitted or disseminated, in any form, or by any means, without prior written permission from the publisher, to whom all requests to reproduce copyright material should be directed in writing. This authorization does not extend to any other kind of copying, by any means, in any form, and for any purpose other than private research use. ISSN 1175-5326 (Print edition) ISSN 1175-5334 (Online edition) 2 · Zootaxa 1418 © 2007 Magnolia Press FERRARIS Zootaxa 1418: 1–628 (2007) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ ZOOTAXA Copyright © 2007 · Magnolia Press ISSN 1175-5334 (online edition) Checklist of catfishes, recent and fossil (Osteichthyes: Siluriformes), and catalogue of siluriform primary types CARL J. FERRARIS, JR. 2944 NE Couch Street, Portland, Oregon, 97232, U.S.A. E-mail: [email protected] Research Associate, National Museum of Natural History, Smithsonian Institution, Washington Research Associate, American Museum of Natural History, New York Research Associate and Honorary Fellow, California Academy of Sciences, San Francisco Table of contents Abstract .................................................................................................................................................................................................... -
Siluriformes: Ariidae)
SYSTEMATICS AND EVOLUTIONARY HISTORY OF SEA CATFISHES (SILURIFORMES: ARIIDAE) Except where reference is made to the work of others, the work described in this dissertation is my own or was done in collaboration with my advisory committee. This dissertation does not include proprietary or classified information. _____________________________ Ricardo Betancur-R. Certificate of Approval: _____________________________ _____________________________ Kenneth M. Halanych Jonathan W. Armbruster, Chair Associate Professor Associate Professor Biological Sciences Biological Sciences _____________________________ ______________________________ Scott R. Santos Mark H. Sabaj Associate Professor Collection Manager of Fishes Biological Sciences Academy of Natural Sciences, Philadelphia _____________________________ George T. Flowers Interim Dean Graduate School SYSTEMATICS AND EVOLUTIONARY HISTORY OF SEA CATFISHES (SILURIFORMES: ARIIDAE) Ricardo Betancur-R. A Dissertation Submitted to the Graduate Faculty of Auburn University in Partial Fulfillment of the Requirements for the Degree of Doctor of Philosophy Auburn, Alabama May 9, 2009 SYSTEMATICS AND EVOLUTIONARY HISTORY OF SEA CATFISHES (SILURIFORMES: ARIIDAE) Ricardo Betancur-R. Permission is granted to Auburn University to make copies of this dissertation at its discretion, upon the request of individuals or institutions and at their expense. The author reserves all publication rights. ______________________________ Signature of Author ______________________________ Date of Graduation iii VITA Ricardo Betancur Rodríguez, son of Christian Betancur Botero and Maria Cristina Rodríguez Vélez, was born in Medellín, Colombia on December 15, 1976. He received a Bachelor of Science in Marine Biology in 2000 from Universidad Jorge Tadeo Lozano (Bogotá, Colombia). Ricardo pursed his degree for Magister in Sciences in Marine Biology from 2001 through 2004 at Universidad Nacional de Colombia (Bogotá) and received Cum Laude honors. He entered Graduate School, Auburn University, in August, 2004.