The Role of Calcium Flux in the Regulation of Filopodia Dynamics

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The Role of Calcium Flux in the Regulation of Filopodia Dynamics THE ROLE OF CALCIUM FLUX IN THE REGULATION OF FILOPODIA DYNAMICS Omolade Ademuyiwa A Thesis Submitted to the Graduate College of Bowling Green State University in partial fulfillment of the requirements for the degree of MASTER OF SCIENCE August 2019 Committee: Carol Heckman, Advisor Michael Geusz David Giovannucci © 2019 Omolade Ademuyiwa All Rights Reserved iii ABSTRACT Carol Heckman, Advisor Filopodia are finger-like projections on cells that allow the cells to sense and explore their external microenvironment. They are required for cell migration, neurogenesis and several other physiological processes. Filopodia dynamics have been widely studied in nerve cells. Here, I investigated the role of increased cytoplasmic calcium levels in the regulation of filopodia through activation of store-operated calcium entry in epithelial cells. The depletion of the endoplasmic reticulum store caused a transient increase in filopodia. The increase in fraction of cells with filopodia and percentage coverage of filopodia was seen at 10 min followed by a decrease at 30 min of treatment with cyclopiazonic acid (CPA). Filopodia dynamics are more sensitive to and regulated by Transient receptor potential cation (TRPC) channels. The downstream effectors of calcium such as calpain and calmodulin are negative regulators of filopodia. The possible mechanisms by which calcium regulates filopodia through these downstream effectors were reported here. The effect of calcium-like protein 2 (CALP2) in filopodia dynamics was first described in this study. iv To my parents, Chief A.S.A. Ademuyiwa and Mrs. Adenike Adetoye-Ademuyiwa v ACKNOWLEDGMENTS My sincere gratitude goes to my advisor, Dr. Carol Heckman. Thank you for standing by me every step of the way towards this achievement. This would not have been possible without you. I appreciate your guidance and for giving me the opportunity to work in your lab. You are like a mother to me and I pray for you this day that God will reward you and create a special place for you in Heaven because you are Heaven sent. I want to thank Dr. Cayer for showing me the ropes in the lab. I have learned so much in the past 2 years and I have you to thank for it. I will also like to thank my committee, Dr Michael Geusz and Dr. David Giovannucci for your guidance and for always ready to render your assistance when needed. In addition, Katie, Blair, Robyn and Nicole, thank you for all your help with filopodia counts. I will like to thank Bowling Green State University for my assistantship and general support. Lastly, I will like to thank my parents. Daddy thank you for my upbringing. I hope you are proud of me in heaven. May you continue to rest in the bosom of the Lord. Mummy, thank you for your infinite prayers and for always encouraging me to be the best I can be. vi TABLE OF CONTENTS Page CHAPTER ONE. INTRODUCTION ................................................................................ 1 1.1 Filopodia structure and formation ..................................................................... 1 1.2 Structural components of filopodia ................................................................... 5 1.2.1 Actin filaments .................................................................................. 5 1.2.2 Ena/VASP and Mena ......................................................................... 7 1.2.3 Small GTPases and their effectors ...................................................... 8 1.2.4 Wiskott-Aldrich syndrome protein (WASP) ....................................... 9 1.2.5 Fascin ................................................................................................ 9 1.2.6 Myosin-X .......................................................................................... 9 1.3 Filopodia regulation ......................................................................................... 12 1.3.1 Integrins............................................................................................. 12 1.3.2 Protein kinase C (PKC) ...................................................................... 13 1.4 Calcium signaling effect on filopodia formation ............................................... 14 1.4.1 Calcium in the body ........................................................................... 14 1.4.2 Calcium concentration needed for physiological processes ................. 14 1.4.3 Calcium signaling .............................................................................. 14 1.4.4 Intracellular store depletion ................................................................ 15 1.4.5 Downstream effectors of calcium ....................................................... 17 1.4.5.1 Calmodulin (CaM) .............................................................. 17 1.4.5.2 Calmodulin kinase (CaMK) ................................................. 18 1.4.5.3 Calpain ................................................................................ 20 vii 1.4.5.4 Calcineurin .......................................................................... 20 1.5 Calcium-filopodia relationship ......................................................................... 20 1.5.1 Calcium channel effects on filopodia formation ................................. 23 1.6 Aims and objectives ......................................................................................... 23 1.7 Hypothesis ....................................................................................................... 24 1.8 Significance of the study .................................................................................. 24 CHAPTER TWO. MATERIALS AND METHODS .......................................................... 25 2.1 Cell culture....................................................................................................... 25 2.1.1 Germanium (Ge) substrates for cell culture ........................................ 25 2.2 Calcium store depletion and replenishment ....................................................... 25 2.3 Chemical treatment and fixation ....................................................................... 26 2.3.1 Fixation ............................................................................................. 26 2.4 Filopodia determination.................................................................................... 27 2.5 Relative changes in calcium concentration ....................................................... 27 2.6 Statistical analysis ............................................................................................ 28 CHAPTER THREE. RESULTS........................................................................................ 29 3.1 Effect of ER depletion on filopodia formation .................................................. 29 3.1.2 Effect of ER stress causes an increase in calcium ............................... 31 3.2 Effect of calcium influx after store depletion on filopodia ................................ 35 3.2.1 Role of calcium channels in the regulation of filopodia ...................... 35 3.2.1.1 TRPC .................................................................................. 35 3.2.1.2 Orai ..................................................................................... 35 3.2.1.3 VGCC ................................................................................. 36 viii 3.3 Effect of downstream effectors of Calcium on filopodia regulation................... 40 3.3.1 Calpain .............................................................................................. 40 3.3.2 Calcineurin ........................................................................................ 40 3.3.3 CaMKII ............................................................................................. 40 3.3.4 CaM................................................................................................... 41 CHAPTER FOUR. DISCUSSION .................................................................................... 44 4.1 Increased cytoplasmic calcium regulates filopodia............................................ 44 4.2 Calcium influx through TRPC channel may be important in filopodia regulation ............................................................................................................... 46 4.3 The role of downstream effectors of calcium in the regulation of filopodia ....... 49 REFERENCES .................................................................................................................. 52 ix LIST OF FIGURES Figure Page 1 Architectural arrangement of filopodia in neurons .................................................. 2 2 GFP-actin time-lapse images showing stages of filopodia dynamics during dorsal closure at two-minute intervals ............................................................................... 4 3 Actin filament assembly and disassembly in filopodia ............................................ 6 4 Filopodia formation and elongation stages during cell migration ............................ 10 5 Structure of integrin and its subunits ...................................................................... 12 6 Main paths of calcium flux ..................................................................................... 16 7 ER depletion effect on filopodia dynamics ............................................................. 30 8 Hypothetical interpretation of time course .............................................................. 32 9 Increase in
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