Substitution of Isoleucine for Threonine at Position 190 of S-Opsin Causes S-Cone-Function Abnormalities ⇑ Rigmor C
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The Vertebrate Retina Contains Two Types of Photoreceptors: Rods That
JOURNAL OF NEUROCHEMISTRY | 2009 | 108 | 91–101 doi: 10.1111/j.1471-4159.2008.05739.x *Department of Anatomy, School of Medicine, Tokyo Women’s Medical University, Tokyo, Japan Genetics and Development Division, Toronto Western Research Institute, University Health Network, Department of Ophthalmology and Visual Sciences and Department of Laboratory Medicine and Pathobiology, University of Toronto, Toronto, Ontario, Canada àUniversity of Ottawa Eye Institute and Ottawa Health Research Institute, Ottawa, Ontario, Canada Abstract The retinas of staggerer mice, carrying a null mutation of Color vision is supported by retinal cone photoreceptors that, RORa, show significant down-regulation of Opn1sw, in most mammals, express two photopigments sensitive to Opn1mw, and Arr3. RORa acts in synergy with cone-rod short (S-opsin) or middle (M-opsin) wavelengths. Expression homeobox transcription factor (Crx), to activate the Opn1sw of the Opn1sw and Opn1mw genes, encoding S-opsin and promoter in vitro. Chromatin immunoprecipitation assays re- M-opsin, respectively, is under the control of nuclear veal that RORa directly binds to the Opn1sw promoter, receptors, including thyroid hormone receptor b2 (TRb2), Opn1mw locus control region, and the Arr3 promoter in vivo. retinoid X receptor c (RXRc), and RORb, a member of the Our data suggest that RORa plays a crucial role in cone retinoic acid receptor-related orphan receptor (ROR) family. development by directly regulating multiple cone genes. We now demonstrate that RORa, another member of the ROR Keywords: arrestin, cone photoreceptor, opsin, retina, family, regulates Opn1sw, Opn1mw, as well as Arr3 (cone RORa, staggerer. arrestin) in the mouse retina. RORa expression is detected in J. -
Investigating Cone Photoreceptor Development Using Patient-Derived NRL Null Retinal Organoids
ARTICLE https://doi.org/10.1038/s42003-020-0808-5 OPEN Investigating cone photoreceptor development using patient-derived NRL null retinal organoids Alyssa Kallman1,11, Elizabeth E. Capowski 2,11, Jie Wang 3, Aniruddha M. Kaushik4, Alex D. Jansen2, Kimberly L. Edwards2, Liben Chen4, Cynthia A. Berlinicke3, M. Joseph Phillips2,5, Eric A. Pierce6, Jiang Qian3, ✉ ✉ Tza-Huei Wang4,7, David M. Gamm2,5,8 & Donald J. Zack 1,3,9,10 1234567890():,; Photoreceptor loss is a leading cause of blindness, but mechanisms underlying photoreceptor degeneration are not well understood. Treatment strategies would benefit from improved understanding of gene-expression patterns directing photoreceptor development, as many genes are implicated in both development and degeneration. Neural retina leucine zipper (NRL) is critical for rod photoreceptor genesis and degeneration, with NRL mutations known to cause enhanced S-cone syndrome and retinitis pigmentosa. While murine Nrl loss has been characterized, studies of human NRL can identify important insights for human retinal development and disease. We utilized iPSC organoid models of retinal development to molecularly define developmental alterations in a human model of NRL loss. Consistent with the function of NRL in rod fate specification, human retinal organoids lacking NRL develop S- opsin dominant photoreceptor populations. We report generation of two distinct S-opsin expressing populations in NRL null retinal organoids and identify MEF2C as a candidate regulator of cone development. 1 Institute of Genetic Medicine, Johns Hopkins University School of Medicine, Baltimore, USA. 2 Waisman Center, University of Wisconsin-Madison, Madison, USA. 3 Department of Ophthalmology, Wilmer Eye Institute, Johns Hopkins University School of Medicine, Baltimore, USA. -
G Protein-Coupled Receptors
S.P.H. Alexander et al. The Concise Guide to PHARMACOLOGY 2015/16: G protein-coupled receptors. British Journal of Pharmacology (2015) 172, 5744–5869 THE CONCISE GUIDE TO PHARMACOLOGY 2015/16: G protein-coupled receptors Stephen PH Alexander1, Anthony P Davenport2, Eamonn Kelly3, Neil Marrion3, John A Peters4, Helen E Benson5, Elena Faccenda5, Adam J Pawson5, Joanna L Sharman5, Christopher Southan5, Jamie A Davies5 and CGTP Collaborators 1School of Biomedical Sciences, University of Nottingham Medical School, Nottingham, NG7 2UH, UK, 2Clinical Pharmacology Unit, University of Cambridge, Cambridge, CB2 0QQ, UK, 3School of Physiology and Pharmacology, University of Bristol, Bristol, BS8 1TD, UK, 4Neuroscience Division, Medical Education Institute, Ninewells Hospital and Medical School, University of Dundee, Dundee, DD1 9SY, UK, 5Centre for Integrative Physiology, University of Edinburgh, Edinburgh, EH8 9XD, UK Abstract The Concise Guide to PHARMACOLOGY 2015/16 provides concise overviews of the key properties of over 1750 human drug targets with their pharmacology, plus links to an open access knowledgebase of drug targets and their ligands (www.guidetopharmacology.org), which provides more detailed views of target and ligand properties. The full contents can be found at http://onlinelibrary.wiley.com/doi/ 10.1111/bph.13348/full. G protein-coupled receptors are one of the eight major pharmacological targets into which the Guide is divided, with the others being: ligand-gated ion channels, voltage-gated ion channels, other ion channels, nuclear hormone receptors, catalytic receptors, enzymes and transporters. These are presented with nomenclature guidance and summary information on the best available pharmacological tools, alongside key references and suggestions for further reading. -
Intermixing the OPN1LW and OPN1MW Genes Disrupts the Exonic Splicing Code Causing an Array of Vision Disorders
G C A T T A C G G C A T genes Review Intermixing the OPN1LW and OPN1MW Genes Disrupts the Exonic Splicing Code Causing an Array of Vision Disorders Maureen Neitz * and Jay Neitz Department of Ophthalmology and Vision Science Center, University of Washington, Seattle, WA 98109, USA; [email protected] * Correspondence: [email protected]; Tel.: +1-206-543-7998 Abstract: Light absorption by photopigment molecules expressed in the photoreceptors in the retina is the first step in seeing. Two types of photoreceptors in the human retina are responsible for image formation: rods, and cones. Except at very low light levels when rods are active, all vision is based on cones. Cones mediate high acuity vision and color vision. Furthermore, they are critically important in the visual feedback mechanism that regulates refractive development of the eye during childhood. The human retina contains a mosaic of three cone types, short-wavelength (S), long-wavelength (L), and middle-wavelength (M) sensitive; however, the vast majority (~94%) are L and M cones. The OPN1LW and OPN1MW genes, located on the X-chromosome at Xq28, encode the protein component of the light-sensitive photopigments expressed in the L and M cones. Diverse haplotypes of exon 3 of the OPN1LW and OPN1MW genes arose thru unequal recombination mechanisms that have intermixed the genes. A subset of the haplotypes causes exon 3- skipping during pre-messenger RNA splicing and are associated with vision disorders. Here, we review the mechanism by which splicing defects in these genes cause vision disorders. Citation: Neitz, M.; Neitz, J. -
Multi-Functionality of Proteins Involved in GPCR and G Protein Signaling: Making Sense of Structure–Function Continuum with In
Cellular and Molecular Life Sciences (2019) 76:4461–4492 https://doi.org/10.1007/s00018-019-03276-1 Cellular andMolecular Life Sciences REVIEW Multi‑functionality of proteins involved in GPCR and G protein signaling: making sense of structure–function continuum with intrinsic disorder‑based proteoforms Alexander V. Fonin1 · April L. Darling2 · Irina M. Kuznetsova1 · Konstantin K. Turoverov1,3 · Vladimir N. Uversky2,4 Received: 5 August 2019 / Revised: 5 August 2019 / Accepted: 12 August 2019 / Published online: 19 August 2019 © Springer Nature Switzerland AG 2019 Abstract GPCR–G protein signaling system recognizes a multitude of extracellular ligands and triggers a variety of intracellular signal- ing cascades in response. In humans, this system includes more than 800 various GPCRs and a large set of heterotrimeric G proteins. Complexity of this system goes far beyond a multitude of pair-wise ligand–GPCR and GPCR–G protein interactions. In fact, one GPCR can recognize more than one extracellular signal and interact with more than one G protein. Furthermore, one ligand can activate more than one GPCR, and multiple GPCRs can couple to the same G protein. This defnes an intricate multifunctionality of this important signaling system. Here, we show that the multifunctionality of GPCR–G protein system represents an illustrative example of the protein structure–function continuum, where structures of the involved proteins represent a complex mosaic of diferently folded regions (foldons, non-foldons, unfoldons, semi-foldons, and inducible foldons). The functionality of resulting highly dynamic conformational ensembles is fne-tuned by various post-translational modifcations and alternative splicing, and such ensembles can undergo dramatic changes at interaction with their specifc partners. -
Jpet #245167 1
JPET Fast Forward. Published on November 21, 2017 as DOI: 10.1124/jpet.117.245167 This article has not been copyedited and formatted. The final version may differ from this version. JPET #245167 TITLE PAGE A combination of G protein-coupled receptor modulators protects photoreceptors from degeneration Tivadar Orban, Henri Leinonen, Tamar Getter, Zhiqian Dong, Wenyu Sun, Songqi Gao, Downloaded from Alexander Veenstra, Hossein Heidari-Torkabadi, Timothy S. Kern, Philip D. Kiser, and Krzysztof Palczewski jpet.aspetjournals.org Department of Pharmacology, Cleveland Center for Membrane and Structural Biology, School of Medicine, Case Western Reserve University, Cleveland, OH 44106, USA (T.O., H. L., S. Q., at ASPET Journals on September 24, 2021 S. G., T. G., A. V., H. H-T., T. S. K., P. D. K., K. P.) Research Service, Louis Stokes Cleveland Veterans Affairs Medical Center, Cleveland, OH 44106, USA (T. S. K., P. D. K.) Polgenix Inc., Cleveland, OH 44106, USA (Z. D., W. S.) 1 JPET Fast Forward. Published on November 21, 2017 as DOI: 10.1124/jpet.117.245167 This article has not been copyedited and formatted. The final version may differ from this version. JPET #245167 RUNNING TITLE PAGE RUNNING TITLE: Drugs protective against retinal rod and cone degeneration. CORRESPONDENCE Krzysztof Palczewski, Dept. of Pharmacology, School of Medicine, Case Western Reserve Downloaded from University, 10900 Euclid Ave., Cleveland, OH 44106. Tel.: 216-368-4631; Fax: 216-368-1300; E-mail: [email protected] jpet.aspetjournals.org MANUSCRIPT STATISTICS Text Pages: 41 at ASPET Journals on September 24, 2021 Tables: 1 Figures: 8 References: 36 Abstract Length: 248 words Introduction Length: 742 words Discussion Length: 1436 words 2 JPET Fast Forward. -
Journal 37.Pdf
Biomaterials 34 (2013) 1911e1920 Contents lists available at SciVerse ScienceDirect Biomaterials journal homepage: www.elsevier.com/locate/biomaterials The activation of directional stem cell motility by green light-emitting diode irradiation Wei-Kee Ong a,1, How-Foo Chen b,1, Cheng-Ting Tsai b, Yun-Ju Fu a, Yi-Shan Wong a, Da-Jen Yen c, Tzu-Hao Chang d,e, Hsien-Da Huang d, Oscar Kuang-Sheng Lee f, Shu Chien g, Jennifer Hui-Chun Ho a,h,i,* a Center for Stem Cell Research, Wan Fang Hospital, Taipei Medical University, Taipei, Taiwan b Institute of Biophotonics, National Yang-Ming University, Taipei, Taiwan c Department of Material Science and Engineering, National Tsing Hua University, HsinChu, Taiwan d Institute of Bioinformatics and Systems Biology, National Chiao Tung University, HsinChu, Taiwan e Graduate Institute of Biomedical Informatics, Taipei Medical University, Taiwan f Institute of Clinical Medicine, National Yang-Ming University, Taiwan g Departments of Bioengineering and Medicine, Institute of Engineering in Medicine, UC San Diego, La Jolla, CA, USA h Graduate Institute of Clinical Medicine, Taipei Medical University, Taipei, Taiwan i Department of Ophthalmology, Wan Fang Hospital, Taipei Medical University, Taipei, Taiwan article info abstract Article history: Light-emitting diode (LED) irradiation is potentially a photostimulator to manipulate cell behavior by Received 12 November 2012 opsin-triggered phototransduction and thermal energy supply in living cells. Directional stem cell Accepted 29 November 2012 motility is critical for the efficiency and specificity of stem cells in tissue repair. We explored that green Available online 19 December 2012 LED (530 nm) irradiation directed the human orbital fat stem cells (OFSCs) to migrate away from the LED light source through activation of extracellular signal-regulated kinases (ERK)/MAP kinase/p38 signaling Keywords: pathway. -
Evolutionary History of Teleost Intron-Containing and Intron-Less
www.nature.com/scientificreports OPEN Evolutionary history of teleost intron-containing and intron-less rhodopsin genes Received: 15 February 2019 Chihiro Fujiyabu1, Keita Sato 2, Ni Made Laksmi Utari2,3, Hideyo Ohuchi2, Accepted: 9 July 2019 Yoshinori Shichida1,4,5 & Takahiro Yamashita1,5 Published: xx xx xxxx Recent progress in whole genome sequencing has revealed that animals have various kinds of opsin genes for photoreception. Among them, most opsin genes have introns in their coding regions. However, it has been known for a long time that teleost retinas express intron-less rhodopsin genes, which are presumed to have been formed by retroduplication from an ancestral intron-containing rhodopsin gene. In addition, teleosts have an intron-containing rhodopsin gene (exo-rhodopsin) exclusively for pineal photoreception. In this study, to unravel the evolutionary origin of the two teleost rhodopsin genes, we analyzed the rhodopsin genes of non-teleost fshes in the Actinopterygii. The phylogenetic analysis of full-length sequences of bichir, sturgeon and gar rhodopsins revealed that retroduplication of the rhodopsin gene occurred after branching of the bichir lineage. In addition, analysis of the tissue distribution and the molecular properties of bichir, sturgeon and gar rhodopsins showed that the abundant and exclusive expression of intron-containing rhodopsin in the pineal gland and the short lifetime of its meta II intermediate, which leads to optimization for pineal photoreception, were achieved after branching of the gar lineage. Based on these results, we propose a stepwise evolutionary model of teleost intron-containing and intron-less rhodopsin genes. Opsins are photoreceptive molecules that universally underlie the molecular basis of visual and non-visual pho- toreception in animals1–3. -
Myopia and Late-Onset Progressive Cone Dystrophy Associate to LVAVA/MVAVA Exon 3 Interchange Haplotypes of Opsin Genes on Chromosome X
Genetics Myopia and Late-Onset Progressive Cone Dystrophy Associate to LVAVA/MVAVA Exon 3 Interchange Haplotypes of Opsin Genes on Chromosome X Orsolya Orosz,1 Istv´an Rajta,2 Attila Vajas,1 Lili Tak´acs,1 Adrienne Csutak,1 Mariann Fodor,1 Bence Kolozsv´ari,1 Miklos´ Resch,3 Katalin Senyi,´ 3 Bal´azs Lesch,3 Viktoria´ Szabo,´ 3 Andr´as Berta,1 Istv´an Balogh,4 and Gergely Losonczy1,5 1Department of Ophthalmology, University of Debrecen, Debrecen, Hungary 2Institute for Nuclear Research, Hungarian Academy of Sciences, Debrecen, Hungary 3Department of Ophthalmology, Semmelweis University, Budapest, Hungary 4Division of Clinical Genetics, Department of Laboratory Medicine, University of Debrecen, Debrecen, Hungary 5Department of Ophthalmology, Zuyderland-Eyescan, Sittard-Geleen, The Netherlands Correspondence: Gergely Losonczy, PURPOSE. Rare interchange haplotypes in exon 3 of the OPN1LW and OPN1MW opsin genes Department of Ophthalmology, Uni- cause X-linked myopia, color vision defect, and cone dysfunction. The severity of the disease versity of Debrecen, H-4032, Na- varies on a broad scale from nonsyndromic high myopia to blue cone monochromatism. Here, gyerdei krt. 98, Debrecen, Hungary; we describe a new genotype–phenotype correlation attributed to rare exon 3 interchange [email protected]. haplotypes simultaneously present in the long- and middle-wavelength sensitive opsin genes Submitted: December 31, 2016 (L- and M-opsin genes). Accepted: February 28, 2017 METHODS. A multigenerational family with X-linked high myopia and cone dystrophy was Citation: Orosz O, Rajta I, Vajas A, et investigated. al. Myopia and late-onset progressive cone dystrophy associate to LVAVA/ RESULTS. Affected male patients had infantile onset myopia with normal visual acuity and color MVAVA exon 3 interchange haplotypes vision until their forties. -
Intermixing the OPN1LW and OPN1MW Genes Disrupts the Exonic Splicing Code Causing an Array of Vision Disorders
Preprints (www.preprints.org) | NOT PEER-REVIEWED | Posted: 8 July 2021 doi:10.20944/preprints202107.0202.v1 Review Intermixing the OPN1LW and OPN1MW Genes Disrupts the Exonic Splicing Code Causing an Array of Vision Disorders Neitz, Maureen 1,*, Neitz, Jay 1 1 University of Washington, Vision Sciences Center [email protected] * Correspondence: [email protected]; Tel.: +1-206-543-7998 Abstract: The first step in seeing is light absorption by photopigment molecules expressed in the photoreceptors of the retina. There are two types of photoreceptors in the human retina that are responsible for image formation, rods and cones. Except at very low light levels when rods are active, all vision is based on cones. Cones mediate high acuity vision and color vision. Further- more, they are critically important in the visual feedback mechanism that regulates refractive de- velopment of the eye during childhood. The human retina contains a mosaic of three cone types, short-wavelength (S), long-wavelength (L) and middle-wavelength (M); however, the vast major- ity (~94%) are L and M cones. The OPN1LW and OPN1MW genes, located on the X-chromosome at Xq28, encode the protein component of the light-sensitive photopigments. Here we review mechanism by which splicing defects in these genes cause vision disorders. Keywords: colorblindness, color vision, myopia, cone photopigment, exon skipping, X-linked cone dysfunction 1. Introduction Cone photoreceptors contain light sensitive photopigments comprised of an apo- protein component termed opsin, and a covalently bound chromophore, 11-cis reti- nal. The human S cone opsin gene, OPN1SW resides on chromosome 6, while the L and M cone opsin genes, OPN1LW and OPN1MW, are located on the X-chromosome at Xq28. -
Datasheet Blank Template
SAN TA C RUZ BI OTEC HNOL OG Y, INC . OPN1MW/LW (C-19): sc-14358 BACKGROUND PRODUCT G protein-coupled receptors (GPCRs), which are characterized by containing Each vial contains 200 µg IgG in 1.0 ml of PBS with < 0.1% sodium azide seven transmembrane α helices, elicit G protein-mediated signaling cas cades and 0.1% gelatin. in response to a variety of stimuli. The opsin subfamily, which represents Blocking peptide available for competition studies, sc-14358 P, (100 µg approximately 90 percent of all GPCRs, is comprised of photoreceptors that peptide in 0.5 ml PBS containing < 0.1% sodium azide and 0.2% BSA). are activated by light. It includes the red-, green- and blue-sensitive opsins and rhodopsin. The opsin subfamily consists of an apoprotein covalently linked APPLICATIONS to 11 -cis- retinal, which undergoes isomerization upon the absorption of pho - tons. This isomerization leads to a conformational change of the protein, OPN1MW/LW (C-19) is recommended for detection of the opsin proteins which results in the activation of hundreds of G proteins. Color is perceived encoded by OPN1MW and OPN1LW of human origin, and the opsin protein in humans by three pigments, which localize to retinal cone photoreceptor encoded by Opn1mw of mouse and rat origin by Western Blotting (starting cells. Mutations in the gene encoding OPN1MW and OPN1MW2 are the dilution 1:200, dilution range 1:100-1:1000), immunofluorescence (starting cause of deutanopic colorblindness, whereas OPN1LW gene mutations lead dilution 1:50, dilution range 1:50-1:500) and solid phase ELISA (starting to protanopic colorblindness. -
The Vertebrate Ancestral Repertoire of Visual Opsins, Transducin Alpha Subunits and Oxytocin/Vasopressin Receptors Was Establish
Lagman et al. BMC Evolutionary Biology 2013, 13:238 http://www.biomedcentral.com/1471-2148/13/238 RESEARCH ARTICLE Open Access The vertebrate ancestral repertoire of visual opsins, transducin alpha subunits and oxytocin/ vasopressin receptors was established by duplication of their shared genomic region in the two rounds of early vertebrate genome duplications David Lagman1†, Daniel Ocampo Daza1†, Jenny Widmark1,XesúsMAbalo1, Görel Sundström1,2 and Dan Larhammar1* Abstract Background: Vertebrate color vision is dependent on four major color opsin subtypes: RH2 (green opsin), SWS1 (ultraviolet opsin), SWS2 (blue opsin), and LWS (red opsin). Together with the dim-light receptor rhodopsin (RH1), these form the family of vertebrate visual opsins. Vertebrate genomes contain many multi-membered gene families that can largely be explained by the two rounds of whole genome duplication (WGD) in the vertebrate ancestor (2R) followed by a third round in the teleost ancestor (3R). Related chromosome regions resulting from WGD or block duplications are said to form a paralogon. We describe here a paralogon containing the genes for visual opsins, the G-protein alpha subunit families for transducin (GNAT) and adenylyl cyclase inhibition (GNAI), the oxytocin and vasopressin receptors (OT/VP-R), and the L-type voltage-gated calcium channels (CACNA1-L). Results: Sequence-based phylogenies and analyses of conserved synteny show that the above-mentioned gene families, and many neighboring gene families, expanded in the early vertebrate WGDs. This allows us to deduce the following evolutionary scenario: The vertebrate ancestor had a chromosome containing the genes for two visual opsins, one GNAT, one GNAI, two OT/VP-Rs and one CACNA1-L gene.