Detection of Yeasts and Filamentous Fungi in Blood Cultures During a 10-Year Period (1972 to 1981) JACQUES BILLE, LESLIE STOCKMAN, and GLENN D

Total Page:16

File Type:pdf, Size:1020Kb

Detection of Yeasts and Filamentous Fungi in Blood Cultures During a 10-Year Period (1972 to 1981) JACQUES BILLE, LESLIE STOCKMAN, and GLENN D JOURNAL OF CLINICAL MICROBIOLOGY, Nov. 1982, p. 968-970 Vol. 16, No. 5 0095-1137/82/110968-03$02.00/0 Copyright © 1982, American Society for Microbiology Detection of Yeasts and Filamentous Fungi in Blood Cultures During a 10-Year Period (1972 to 1981) JACQUES BILLE, LESLIE STOCKMAN, AND GLENN D. ROBERTS* Section of Clinical Microbiology, Mayo Clinic and Mayo Foundation, Rochester, Minnesota 55905 Received 27 May 1982/Accepted 4 August 1982 During a 10-year period (January 1972 to December 1981), 69,066 fungal blood cultures were performed by using a biphasic brain heart infusion medium. A total of 838 fungi were recovered from 302 patients. Candida species represented 71% (595) of all positive cultures, Cryptococcus neoformans 12.6% (106), and Histo- plasma capsulatum 13.1% (110). An increase in the number of cases of funge- recovered from 302 patients. The overall recov- mia at the Mayo Clinic in 1981 and our interest in ery rate of fungi in blood cultures during this newly developed blood culture procedures period was 1.21%, with yearly variations ranging prompted us to review the fungal blood cultures between 0.75% and 2.52%. performed during the 10-year period January Table 1 lists all isolates by genus and species 1972 to December 1981. that were recovered and the number of patients We determined the recovery rate and the from whom they were recovered. Candida spp. mean recovery time offungi in the biphasic brain represented 71% of all isolates and 74.8% of all heart infusion (BHI) blood culture bottle previ- positive patients. C. albicans was the most ously described (11). Data on recovery of yeasts common member of the genus (42.5%), followed in blood are limited in the literature (4, 5, 11, 15) by C. tropicalis (17%) and C. glabrata (14%). and are scant for the filamentous fungi (6, 14). The next two most frequently recovered orga- Such data are necessary to detect changes in the nisms were C. neoformans (12.6%) and H. cap- predominant species of yeasts found in blood sulatum (13.1%). The genera Candida and Cryp- cultures and to determine their recovery time. tococcus represented 84% of all positive They may also serve as comparative values in cultures and 85% of all positive patients. the evaluation of new fungal blood culture sys- Table 2 shows the recovery time in days for tems as they are developed. yeasts and filamentous fungi in the BHI biphasic Fungal blood culture data collected from Jan- bottle. Among the Candida species, C. glabrata uary 1972 to December 1981 were reviewed for and a rare isolate of C. lusitaniae required an the recovery of yeasts and filamentous fungi. extended incubation period. Isolates of C. tropi- Blood (10 ml) was collected and inoculated into calis, C. krusei, and C. pseudotropicalis were a biphasic BHI agar-broth bottle (Diagnostics, the only yeasts recovered in less than 3 days. In Inc., St. Paul, Minn.) when fungal sepsis was contrast, the mean recovery time exceeded 14 suspected. Each bottle contained a slant of 50 ml days for isolates ofH. capsulatum and Nocardia of BHI agar (BBL Microbiology Systems, Cock- asteroides. eysville, Md.) overlaid with 60 ml of BHI broth Figure 1 shows the number of patients with (Difco Laboratories, Detroit, Mich.). After in- fungemia and their etiological agents by genus oculation, the cultures were permanently vented and species during three successive periods dur- with a sterile cotton-plugged needle and incubat- ing this study. Although the number of cases of ed in an upright position for 30 days at 30°C. C. albicans and C. parapsilosis fungemia did not Cultures were examined daily for visual evi- vary by year, the number of patients with C. dence of growth, and each examination was tropicalis fungemia increased progressively. The followed by a gentle washing of the biphasic number of patients with C. glabrata fungemia BHI agar surface with the blood-broth mixture, increased abruptly during the last 2 years at our allowing a daily subculture onto the slant. Fungi institution. and Nocardia isolates recovered from blood Although the recovery of fungi from blood is cultures were further identified by using conven- not always a reliable index of disseminated or tional procedures (9). invasive disease, fungal blood cultures remain During the 10-year study period, the results of the standard method for the detection of funge- 69,066 fungal blood cultures were reviewed. A mia (12). Fungemia is a relatively uncommon total of 838 yeasts or filamentous fungi were event; however, the overall blood culture posi- 968 VOL. 16, 1982 NOTES 969 TABLE 1. Number of cultures and patients positive study evaluated a commercially available BHI for fungi in the biphasic BHI fungal blood culture biphasic bottle that contained sodium polyaneth- medium during a 10-year period, 1972-1981 olsulfonate and carbon dioxide, unlike the sys- that we previously described (11). Cultures Organism No. of No. of tem Organism ~~~positive ptet were incubated at 25 to 27°C, not at the recom- cultures patients mended incubation temperature of 30°C. Recov- Candida albicans 263 101 ery times reported for the BHI medium were Candida tropicalis 100 36 greatly extended and did not agree with those Candida glabrata 84 34 reported here or those previously reported (11). Cryptococcus neoformans 106 30 The only valid comparative data regarding the Candida parapsilosis 76 29 detection time included in the study were de- Histoplasma capsulatum 110 26 Candida tropicalis 59 20 rived from eight cultures from five patients. We (sucrose-negative variant) feel that these scant data do not support the Nocardia asteroidesa 6 5 strong conclusions reached by the authors. Candida krusei 3 3 In our experience, 88% of all yeasts were Coccidioides immitis 5 1 detected during the first week of incubation, and Rhodotorula spp. 3 2 39 and 50%o of the isolates of C. glabrata and C. Candida pseudotropicalis 3 1 lusitaniae, respectively, were detected during Candida lusitaniae 6 1 the second week. N. asteroides and the filamen- Candida spp. 1 1 tous fungi required more than 2 weeks of incuba- Saccharomyces spp. 2 1 Sporothrix schenckii 1 1 tion until detection. Due to the extended incuba- Fusarium spp. 1 1 tion period of the latter, it is recommended that Othersb 9 9 cultures be kept for 30 days before being dis- carded as negative. a Nocardia asteroides is considered to be a branch- Changes iin the distribution of predominant ing, partially acid-fast bacterium; however, it is com- of Candida in fungemia during monly recovered on media after extended incubation. species involved b Considered as contaminants: Cryptococcus lau- recent years have been recognized (7, 13), par- rentii (2 cultures/2 patients), Aspergillus species (3/3), ticularly the emergence of C. tropicalis as a Streptomyces (2/2), Ustilago (1/1), and Chaetomium significant cause of disseminated fungal disease. (1/1). We observed the same increase in the number of cases offungemia due to C. tropicalis during the period of this study. The frequency of cases of tivity rate of 1.21% at our institution is slightly higher than those reported in two large cancer TABLE 2. Recovery times of fungi in the biphasic hospitals (0.8 to 1.0o [4, 5]) and three times as BHI fungal blood culture medium Recovery time high as the rate of positivity found in a university Organism (days) hospital by using a radiometric method of detec- Mean 50%o" 95%b Range tion These differences reflect a selec- (8). might Candida albicans 3.5 3 8 1-13 tion of patients at different institutions as well as Candida tropicalis 2.9 3 5 1-9 variation in the methods of detection. Special Candida glabrata 8.3 7 19 2-28 conditions of incubation, particularly venting of Cryptococcus neoformans 4.8 3 11 1-21 the blood culture bottle, allow for better recov- Candida parapsilosis 4.3 4 8 1-12 ery of yeasts (1-3, 10). The use of a biphasic Histoplasma capsulatumc 19.5 19 35 3-39 BHI vented bottle not only improved the recov- Candida tropicalis 2.3 2 4 1-5 ery rate of yeasts and fungi in blood, but it also (sucrose-negative variant) shortened the time of detection when compared Nocardia spp. 15.8 12 7-23 broth bottle J. Bille et Candida krusei 2.8 3 1-4 with a standard (5; al., Coccidioides immitis 12.4 11 8-22 submitted for publication). A shortened detec- Rhodotorula spp. 6.7 4-9 tion time is very important for better patient Candida pseudotropicalis 2.3 2-3 management, since fungemia is often detected Candida lusitaniae 8.7 7 3-14 late in the course of the disease or after death. Saccharomyces spp. 3.0 3 Rapid detection time of yeasts in blood under Sporothrix schenckii 8.0 8 a radiometric procedure (Johnston Labora- Fusarium spp. 3.0 3 was tories, Inc., Cockeysville, Md.) reported a Indicates 50%to of the positive blood cultures de- recently by Hopfer et al. (4). Prevost and Ban- tected before that time. nister (8) also reported data comparing the radio- I Indicates 95% of the positive blood cultures de- metric method with a biphasic BHI medium and tected before that time. concluded that the latter was unsatisfactory for c Cultures were incubated for an additional 2 weeks the detection of yeasts in blood. However, this since past cultures were positive for H. capsulatum. 970 NOTES J. CLIN. MICROBIOL. 5 Candida albicans oploplp - - - - -- -1- a Candida tropicalis -.i Candida glabrata I Candida parapsilosis [] 1980 -,Si 13 1975 -79 Cryptococcus neoformans N 1972 -74 1 Histoplasma capsulatum 11 -1 I I I I I 0 2 4 6 8 10 12 Number of cases/year FIG.
Recommended publications
  • Candida Krusei: Biology, Epidemiology, Pathogenicity and Clinical Manifestations of an Emerging Pathogen
    J. Med. Microbiol. - Vol. 41 (1994), 295-310 0 1994 The Pathological Society of Great Britain and Ireland REVIEW ARTICLE: CLINICAL MYCOLOGY Candida krusei: biology, epidemiology, pathogenicity and clinical manifestations of an emerging pathogen YUTHIKA H. SAMARANAYAKE and L. P. SAMARANAYAKE” Department of Pathology (Oral), Faculty of Medicine and Ord diology Unit, Faculty of Dentistry, University of Hong Kong, 34 Hospital Road, Hong Kong Summary. Early reports of Candida krusei in man describe the organism as a transient, infrequent isolate of minor clinical significance inhabiting the mucosal surfaces. More recently it has emerged as a notable pathogen with a spectrum of clinical manifestations such as fungaemia, endophthalmitis, arthritis and endocarditis, most of which usually occur in compromised patient groups in a nosocomial setting. The advent of human immunodeficiency virus infection and the widespread use of the newer triazole fluconazole to suppress fungal infections in these patients have contributed to a significant increase in C. krusei infection, particularly because of the high incidence of resistance of the yeast to this drug. Experimental studies have generally shown C. krusei to be less virulent than C. albicans in terms of its adherence to both epithelial and prosthetic surfaces, proteolytic potential and production of phospholipases. Furthermore, it would seem that C. krusei is significantlydifferent from other medically important Candida spp. in its structural and metabolic features, and exhibits different behaviour patterns towards host defences, adding credence to the belief that it should be re-assigned taxonomically. An increased awareness of the pathogenic potential of this yeast coupled with the newer molecular biological approaches to its study may facilitate the continued exploration of the epidemiology and pathogenesis of C.
    [Show full text]
  • Candida Auris
    microorganisms Review Candida auris: Epidemiology, Diagnosis, Pathogenesis, Antifungal Susceptibility, and Infection Control Measures to Combat the Spread of Infections in Healthcare Facilities Suhail Ahmad * and Wadha Alfouzan Department of Microbiology, Faculty of Medicine, Kuwait University, P.O. Box 24923, Safat 13110, Kuwait; [email protected] * Correspondence: [email protected]; Tel.: +965-2463-6503 Abstract: Candida auris, a recently recognized, often multidrug-resistant yeast, has become a sig- nificant fungal pathogen due to its ability to cause invasive infections and outbreaks in healthcare facilities which have been difficult to control and treat. The extraordinary abilities of C. auris to easily contaminate the environment around colonized patients and persist for long periods have recently re- sulted in major outbreaks in many countries. C. auris resists elimination by robust cleaning and other decontamination procedures, likely due to the formation of ‘dry’ biofilms. Susceptible hospitalized patients, particularly those with multiple comorbidities in intensive care settings, acquire C. auris rather easily from close contact with C. auris-infected patients, their environment, or the equipment used on colonized patients, often with fatal consequences. This review highlights the lessons learned from recent studies on the epidemiology, diagnosis, pathogenesis, susceptibility, and molecular basis of resistance to antifungal drugs and infection control measures to combat the spread of C. auris Citation: Ahmad, S.; Alfouzan, W. Candida auris: Epidemiology, infections in healthcare facilities. Particular emphasis is given to interventions aiming to prevent new Diagnosis, Pathogenesis, Antifungal infections in healthcare facilities, including the screening of susceptible patients for colonization; the Susceptibility, and Infection Control cleaning and decontamination of the environment, equipment, and colonized patients; and successful Measures to Combat the Spread of approaches to identify and treat infected patients, particularly during outbreaks.
    [Show full text]
  • 1. Economic, Ecological and Cultural Importance of Fungi
    1. Economic, ecological and cultural importance of Fungi Fungi as food Yeast fermentations, Saccaromyces cerevesiae [Ascomycota] alcoholic beverages, yeast leavened bread Glucose 2 glyceraldehyde-3-phosphate + 2 ATP 2 NAD O2 2 NADH2 2 pyruvate + 2 ATP + 2 H2O 2 ethanol 2 acetaldehyde + 2 ATP + 2 CO2 Fungi as food Citric acid Aspergillus niger Fungi as food Cheese Penicillium camembertii, Penicillium roquefortii Rennet, chymosin produced by Rhizomucor miehei and recombinant Aspergillus niger, Saccharomyces cerevesiae chymosin first GM enzyme approved for use in food Fungi as food Quorn mycoprotein, produced from biomass of Fusarium venenatum [Ascomycota] Fungi as food Red yeast rice, Monascus purpureus Soy fermentations, Aspergillus oryzae [Ascomycota] contains lovastatin? Tempeh, made with Rhizopus oligosporus [Zygomycota] Fungi as food Other fungal food products: vitamins and enzymes • vitamins: riboflavin (vitamin B2), commercially produced by Ashbya gossypii • chocolate: cacao beans fermented before being made into chocolate with a mixture of yeasts and filamentous fungi: Candida krusei, Geotrichum candidum, Hansenula anomala, Pichia fermentans • candy: invertase, commercially produced by Aspergillus niger, various yeasts, enzyme splits disaccharide sucrose into glucose and fructose, used to make candy with soft centers • glucoamylase: Aspergillus niger, used in baking to increase fermentable sugar, also a cause of “baker’s asthma” • pectinases, proteases, glucanases for clarifying juices, beverages Fungi as food Perigord truffle, Tuber
    [Show full text]
  • Candida Krusei
    P.O. Box 131375, Bryanston, 2074 Ground Floor, Block 5 Bryanston Gate, Main Road Bryanston, Johannesburg, South Africa www.thistle.co.za Tel: +27 (011) 463 3260 Fax: +27 (011) 463 3036 e-mail : [email protected] Please read this bit first The HPCSA and the Med Tech Society have confirmed that this clinical case study, plus your routine review of your EQA reports from Thistle QA, should be documented as a “Journal Club” activity. This means that you must record those attending for CEU purposes. Thistle will not issue a certificate to cover these activities, nor send out “correct” answers to the CEU questions at the end of this case study. The Thistle QA CEU No is: MT00025. Each attendee should claim THREE CEU points for completing this Quality Control Journal Club exercise, and retain a copy of the relevant Thistle QA Participation Certificate as proof of registration on a Thistle QA EQA. Cycle 22 Organism 6: Candida non-albicans species - Candida krusei Candida species are ubiquitous yeasts, found on many plants and as members of the normal flora of the alimentary tract of mammals and mucocutaneous membrane of humans. All areas of the human gastrointestinal tract can harbor Candid. The most commonly isolated species (50% to 70% of yeast isolates) from human gastrointestinal tract is Candida albicans, followed by Candida tropicalis, Candida parapsilosis, and Candida glabrata. C. glabrata is regarded as a symbiont of humans and can be isolated routinely from the oral cavity and from the gastrointestinal tract, genitourinary, and respiratory tracts of most individuals. As an agent of serious infection it has been associated with endocarditis, meningitis, and multifocal disseminated disease.
    [Show full text]
  • Screening for Triazole Resistance in Clinically Signifcant Aspergillus Species; Report from Pakistan
    Screening for triazole resistance in clinically signicant Aspergillus species; report from Pakistan Saa Moin Aga Khan University Joveria Farooqi ( [email protected] ) Aga Khan University https://orcid.org/0000-0002-9921-4660 Kauser Jabeen Aga Khan University Sidra Laiq Aga Khan University Aa Zafar Aga Khan University Research Keywords: Aspergillosis, Aspergillus avus, Aspergillus fumigatus, Aspergillus niger, Aspergillus terreus, itraconazole, voriconazole and posaconazole. Posted Date: April 3rd, 2020 DOI: https://doi.org/10.21203/rs.2.17755/v2 License: This work is licensed under a Creative Commons Attribution 4.0 International License. Read Full License Version of Record: A version of this preprint was published at Antimicrobial Resistance and Infection Control on May 11th, 2020. See the published version at https://doi.org/10.1186/s13756-020-00731-8. Page 1/17 Abstract Abstract Background: Burden of aspergillosis is reported to be signicant from developing countries including those in South Asia. The estimated burden in Pakistan is also high on the background of tuberculosis and chronic lung diseases. There is concern for management of aspergillosis with the emergence of azole resistant Aspergillus species in neighbouring countries in Central and South Asia. Hence the aim of this study was to screen signicant Aspergillus species isolates at the Microbiology Section of Aga Khan Clinical Laboratories, Pakistan, for triazole resistance. Methods: A descriptive cross-sectional study, conducted at the Aga Khan University Laboratories, Karachi, from September 2016- May 2019. One hundred and fourteen, clinically signicant Aspergillus isolates [ A. fumigatus (38; 33.3%), A. avus (64; 56.1%), A. niger (9; 7.9%) A.
    [Show full text]
  • Vaginal Colonization and Vulvovaginitis by Candida Species in Pregnant Women from Northern of Colombia
    Archivos de Medicina (Col) ISSN: 1657-320X [email protected] Universidad de Manizales Colombia Vaginal colonization and vulvovaginitis by Candida species in pregnant women from Northern of Colombia Suárez, Paola; Belloz, Ana; Puelloz, Martha; Youngz, Gregorio; Duranz, Marlene; Arechavala, Alicia Vaginal colonization and vulvovaginitis by Candida species in pregnant women from Northern of Colombia Archivos de Medicina (Col), vol. 18, no. 1, 2018 Universidad de Manizales, Colombia Available in: https://www.redalyc.org/articulo.oa?id=273856494005 DOI: https://doi.org/10.30554/archmed.18.1.2010.2018 PDF generated from XML JATS4R by Redalyc Project academic non-profit, developed under the open access initiative Artículos de Investigación Vaginal colonization and vulvovaginitis by Candida species in pregnant women from Northern of Colombia Vulvovaginitis y colonización vaginal por especies de Candida en gestantes del norte de Colombia Resumen Paola Suárez [email protected] Cartagena University, Colombia Ana Belloz [email protected] Cartagena University., Colombia Martha Puelloz [email protected] Cartagena University., Colombia Gregorio Youngz [email protected] Cartagena University., Colombia Marlene Duranz [email protected] Cartagena University., Colombia Archivos de Medicina (Col), vol. 18, no. 1, 2018 Alicia Arechavala [email protected] Universidad de Manizales, Colombia Hospital de Infecciosas Muñiz, Buenos Aires, Argentina., Argentina Received: 10 June 2018 Corrected: 12 March 2018 Accepted: 12 April 2018 DOI: https://doi.org/10.30554/ Abstract: Objective: identify the vaginal colonizing Candida species and VVC species, archmed.18.1.2010.2018 predisposing factors and susceptibility against fluconazole in pregnant women attending Redalyc: https://www.redalyc.org/ gynecological outpatient of a maternal clinic in Cartagena (Colombia).
    [Show full text]
  • Setting a Protocol for Identification and Detecting the Prevalence of Candida Auris in Tertiary Egyptian Hospitals Using the CDC Steps
    Scientific Foundation SPIROSKI, Skopje, Republic of Macedonia Open Access Macedonian Journal of Medical Sciences. 2021 Jun 14; 9(A):397-402. https://doi.org/10.3889/oamjms.2021.6095 eISSN: 1857-9655 Category: A - Basic Sciences Section: Microbiology Setting a Protocol for Identification and Detecting the Prevalence of Candida auris in Tertiary Egyptian Hospitals Using the CDC Steps Sahar Mohammed Khairat, Mervat Gaber Anany, Maryam Mostafa Ashmawy , Amira Farouk Ahmed Hussein* Department of Clinical and Chemical Pathology, Faculty of Medicine, Cairo University, Giza, Egypt Abstract Edited by: Slavica Hristomanova-Mitkovska BACKGROUND: Candida is considered the most common cause of opportunistic infections in the world. Increased Citation: Khairat SM, Ashmawy MM, Hussein A. Setting a Protocol for Identification and Detecting the Prevalence use of antifungal agents may have led to increasing resistance of Candida for antifungals and may be related of Candida auris in Tertiary Egyptian Hospitals Using to therapeutic failures. Recently, a multidrug-resistant Candida auris has immerged causing outbreaks in several the CDC Steps. Access Maced J Med Sci. 2021 Jun 14; countries all over the world. This discovered superbug is widely spread causing a broad range of health care- 9(A):397-402. https://doi.org/10.3889/oamjms.2021.6095 associated infections. Keywords: Candida auris; Multidrug resistance; Thermotolerance; Matrix-assisted laser desorption/ AIM: This study aims to set a protocol for the identification and detection of the prevalence of C. auris in tertiary ionization-time of flight Egyptian hospitals following the center of disease and control (CDC) methodology. *Correspondence: Amira Farouk Ahmed Hussein, Department of Clinical and Chemical Pathology, Faculty of Medicine, Cairo University, Giza, Egypt.
    [Show full text]
  • Candida Auris: a Decade of Understanding of an Enigmatic Pathogenic Yeast
    Journal of Fungi Review Candida auris: A Decade of Understanding of an Enigmatic Pathogenic Yeast Ryan Kean 1, Jason Brown 2 , Dolunay Gulmez 2,3 , Alicia Ware 1 and Gordon Ramage 2,* 1 Department of Biological and Biomedical Sciences, School of Health and Life Sciences, Glasgow Caledonian University, Glasgow G4 0BA, UK; [email protected] (R.K.); [email protected] (A.W.) 2 School of Medicine, Dentistry and Nursing, College of Medical, Veterinary and Life Sciences, Glasgow G2 3JZ, UK; [email protected] (J.B.); [email protected] (D.G.) 3 Medical Microbiology Department, Faculty of Medicine, Hacettepe University, Ankara 06230, Turkey * Correspondence: [email protected]; Tel.: +44(0)141 211 9752 Received: 13 January 2020; Accepted: 22 February 2020; Published: 26 February 2020 Abstract: Candida auris is an enigmatic yeast that continues to stimulate interest within the mycology community due its rapid and simultaneous emergence of distinct clades. In the last decade, almost 400 manuscripts have contributed to our understanding of this pathogenic yeast. With dynamic epidemiology, elevated resistance levels and an indication of conserved and unique pathogenic traits, it is unsurprising that it continues to cause clinical concern. This mini-review aims to summarise some of the key attributes of this remarkable pathogenic yeast. Keywords: Candida auris; pathogenicity; in vivo models; biofilms 1. Introduction A decade on since its discovery, Candida auris has rapidly emerged as a significant nosocomial pathogen, responsible for an escalating number of infections across the globe. C. auris possesses some almost unique characteristics for an infectious yeast in that it can survive and persist within the environment for prolonged periods and a significant number of clinical isolates have been reported to be multi-drug resistant, with a very small proportion resistant to three classes of antifungals [1].
    [Show full text]
  • The Evolving Landscape of Fungal Diagnostics, Current and Emerging Microbiological Approaches
    Journal of Fungi Review The Evolving Landscape of Fungal Diagnostics, Current and Emerging Microbiological Approaches Zoe Freeman Weiss 1,2,*, Armando Leon 1 and Sophia Koo 1 1 Brigham and Women’s Hospital, Division of Infectious Diseases, Boston, MA 02115, USA; [email protected] (A.L.); [email protected] (S.K.) 2 Massachusetts General Hospital, Division of Infectious Diseases, Boston, MA 02115, USA * Correspondence: [email protected] Abstract: Invasive fungal infections are increasingly recognized in immunocompromised hosts. Current diagnostic techniques are limited by low sensitivity and prolonged turnaround times. We review emerging diagnostic technologies and platforms for diagnosing the clinically invasive disease caused by Candida, Aspergillus, and Mucorales. Keywords: fungal diagnostics; mycoses; invasive candidiasis; invasive mold infections; invasive aspergillosis; mucormycosis; transplant; immunocompromised host; non-culture diagnostics; cul- ture independent 1. Introduction In recent years, the incidence of invasive fungal infections has increased in parallel with advances in chemotherapies, immunosuppression in solid organ and hematopoietic cell transplantation, and critical care technologies. The diagnosis of invasive fungal disease Citation: Freeman Weiss, Z.; Leon, has traditionally relied on culture, direct microscopy, and histopathology. Conventional A.; Koo, S. The Evolving Landscape culture techniques are frequently insensitive, have prolonged turnaround times (TAT), of Fungal Diagnostics, Current and and may require invasive sampling. An increase in the diversity of pathogenic species Emerging Microbiological makes phenotypic identification challenging, particularly as the number of skilled clinical Approaches. J. Fungi 2021, 7, 127. mycologists declines. Precise species identification is needed given the variability of https://doi.org/10.3390/jof7020127 antifungal drug susceptibility profiles even between closely related organisms.
    [Show full text]
  • A Case of Polymycotic Septicemia Caused by Trichosporon Beigelii
    Jpn. J. Med. Mycol. Vol. 29, 120-126, 1988 ISSN 0583-0516 A Case of Polymycotic Septicemia Caused by Trichosporon beigelii, Candida albi cans and Candida krusei Takeshi Mori, Tomoo Kohara, Makiko Matsumura, Takao Hirano, Yoshihisa Wakabayashi, Hideo Ikemoto, Akiko Watanabe*, Wako Yumura**, Yoshiro Sakamoto**, Toshikazu Shirai** and Hikaru Kume*** Department of Internal Medicine *Central Laboratory for Medical Sciences, Division of Pathology **Department of Pathology, Juntendo University School of Medicine 2-1-1 Hongo, Bunkyo-ku, Tokyo, 113, Japan ***Department of Pathology, Kitasato University, 1-15-1, Kitasato, Sagamihara, Kanagawa, 228, Japan [Received for Publication: December 15, 1987] This report describes a patient with acute leukemia complicated with polymycotic septicemia caused by Candida albicans, C. krusei and Trichosporon beigelii (cutaneum). Oral flucytosine and intravenous miconazole were administered, but the patient died on the 59th hospital day. At autopsy, T. beigelii and C. albicans were isolated from the liver, and T. beigelii was isolated from the lung by cultural examination and pathological investigation by the peroxidase/anti-peroxidase solution method. The patient was intubated with an intravenous catheter for hyperalimentation for a long time. The indwelling intravenous catheter appeared to be the major factor leading to the f ungemia. T. beigelii (cutaneum), a so-called "nonpathogenic yeast," must be considered a potential cause of fungemia. Key words: polymycotic septicemia, Candida albicans, Candida krusei, Trichosporon beigelii (cutaneum), peroxidase/antiperoxidase solution method Introduction Case Report Advances in chemotherapy have contributed to An 18-year-old male the prolongation of life of patients with malignant He complained of lower abdominal pain in early diseases, but they have conversely led to an September, 1985, but this subsided after medica- increased incidence of opportunistic infections, tion administered by a local physician.
    [Show full text]
  • Candida Krusei Infection in an Acute Lymphocytic Leukaemia
    Clinician’s corner Images in Medicine Original Article Miscellaneous Letter to Editor DOI: 10.7860/JCDR/2020/44269.13724 Case Report Review Article Postgraduate Education Candida krusei Infection in an Acute Case Series Experimental Research Lymphocytic Leukaemia Patient: Microbiology Section Microbiology A Case Report Short Communication AROOP MOHANTY1, SUNEETA MEENA2, UTTAM KUMAR NATH3, SUDEEP VANIYATH4, NEELAM KAISTHA5 ABSTRACT Although Candida albicans remains the predominant species causing Blood Stream Infection (BSI), recent studies have demonstrated an emergence of Non-albicans Candida spp (NAC), such as C. glabrata, C. papapsilosis and C. krusei. Candida krusei are yeast-like microorganisms which may colonise the human skin, respiratory or gastrointestinal tract but can cause lethal infections especially in immunocompromised patients. Hereby, author’s report a case of 10-year-old male with T-cell Acute Lymphocytic Leukaemia (ALL) who reported with fever and non-productive cough caused by Candida krusei. Direct gram stain from blood culture and germ tube test was performed. Further, the isolate was initially misidentified by Matrix Assisted Laser Desorption/Ionisation Time of Flight Mass Spectrometry (MALDI-TOF MS) as Trichosporon ovoides which was later identified by molecular sequencing as Candida krusei. Keywords: Candida species, Fungemia, Haematological malignancy CASE REPORT A 10-year-old male with T-cell ALL, who had received high-dose consolidation chemotherapy (HR3 block of ALL IC-BFM 2009 protocol) [1], was admitted on day 11 of chemotherapy cycle with fever and non-productive cough. An informed consent was obtained from the patient. On physical examination, the patient was febrile (100.4°F/38°C) with a heart rate of 120 beats/min, respiratory rate of 24/min, and blood pressure of 70/40 mmHg.
    [Show full text]
  • Real-Time PCR Assay for Detection and Differentiation of Coccidioides Immitis And
    medRxiv preprint doi: https://doi.org/10.1101/2021.04.08.21254780; this version posted April 16, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted medRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license . 1 2 Real-time PCR assay for detection and differentiation of Coccidioides immitis and 3 Coccidioides posadasii from culture and clinical specimens 4 5 Sudha Chaturvedi1,2*, Tanya R. Victor1, Anuradha Marathe1, Ketevan Sidamonidze1,#, 6 Kelly L. Crucillo3, and Vishnu Chaturvedi1* 7 8 1Mycology laboratory, Wadsworth Center, New York State Department of Health, 9 Albany, NY 10 2 Department of Biomedical Sciences, University at Albany, Albany, NY 11 3Coccidioidomycosis Serology Laboratory, University of California School of Medicine, 12 Department of Medical Microbiology and Immunology, Davis, CA 13 14 Species-specific real time PCR for C. immitis and C. posadasii 15 16 17 *Corresponding authors Email: [email protected], 18 [email protected] 19 20 21 22 NOTE: This preprint reports new research that has not been certified1 by peer review and should not be used to guide clinical practice. medRxiv preprint doi: https://doi.org/10.1101/2021.04.08.21254780; this version posted April 16, 2021. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted medRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license .
    [Show full text]