Genetic Differentiation of Solea Solea
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BROODSTOCK NUTRITION: ARACHIDONIC ACID (20:4N-6, ARA) and REPRODUCTIVE PHYSIOLOGY
SENEGALESE SOLE (SOLEA SENEGALENSIS) BROODSTOCK NUTRITION: ARACHIDONIC ACID (20:4n-6, ARA) AND REPRODUCTIVE PHYSIOLOGY Fernando Norambuena Filcun IRTA Institute for Food and Agricultural Research and Technology Center of Sant Carles de la Ràpita Catalonia, Spain Thesis supervisor: Neil Duncan SENEGALESE SOLE (SOLEA SENEGALENSIS) BROODSTOCK NUTRITION: ARACHIDONIC ACID (ARA, 20:4n-6) AND REPRODUCTIVE PHYSIOLOGY Fernando Norambuena Filcun Thesis Submitted in fulfilment of the requirements for the degree of doctor at Autonomous University of Barcelona by the authority of the rector Ana Ripoll Aracil in the presence of the Thesis Committee appointed by the Academic Board Index Abstract…………………………..…………….1 I. General introduction II. Lipids and fatty acid in S. Sole 1. Lipids and fatty acids in fish…………....….5 Abstract……………………….……….21 2. Essential fatty acids (EFAs)….……….…....5 1. Introduction………………….……22 3. Biosynthesis of fatty acids……………....…5 2. Materials and methods……......…...24 4. Senegalese sole and aquaculture…….....…..7 3. Results…………………….....……27 5. Senegalese sole reproduction………….…...8 4. Discussion…………….........……..40 6. Nutrition and reproductive physiology.........9 7. Hypothesis and aims…………………........12 5. Conclusion……………….….….....44 8. References……………………………........12 6. Acknowledgments……….….….....44 7. References…………………..….....45 III. PGs and COX-2 in S. Sole IV. ARA in blood and S. Sole physiology Abstract………………………………...............53 Abstract………………………..…..…77 1. Introduction……………………………......53 1. Introduction……………...….....…77 -
Genetic Diversity and Population Structure of Solea Solea and Solea Senegalensis and Its
Universidade de Lisboa Faculdade de Ciências Departamento de Biologia Animal Genetic diversity and population structure of Solea solea and Solea senegalensis and its relationships with life history patterns Tatiana Fonseca de Araújo Teixeira Tese orientada por Professora Doutora Maria Manuela Coelho Professor Doutor Henrique Nogueira Cabral Mestrado em Biologia e Gestão dos Recursos Marinhos Especialidade em Gestão e Ordenamento do Meio Marinho 2007 "I recognize the right and duty of this generation to develop and use our natural resources, but I do not recognize the right to waste them, or to rob by wasteful use, the generations that come after us." Theodore Roosevelt “Nature provides a free lunch, but only if we control our appetites.” William Ruckelshaus ACKNOWLEDGMENTS To all the people that somehow have contributed to this work I hereby express my sincere gratitude, especially to Professor Maria Manuela Coelho and Professor Henrique N. Cabral for their support, supervision and advice, and for guiding me trough my first steps into marine science, Dr. Joana Marques for her enormous support, advice, help, and especially, friendship in all the moments, at any time and any place, even from the other side of the World, Dr. Célia Teixeira, for her great help from the very beginning of this work, especially for the late night sampling at MARL and all the North to South trips, and for making all “peixes chatos” less boring, All the team from the laboratory of Ecologia Evolutiva e Molecular – Carina, Irene, Rita, Maria Ana, Cristiane and Vera – for their practical help, shared knowledge and support, and a very especial thanks to Francisco, for always having a nice word to say and a huge lot of patience, All the team from the laboratory of Zoologia Marinha, at the Instituto de Oceanografia, especially to Dr. -
FAMILY Soleidae Bonaparte, 1833
FAMILY Soleidae Bonaparte, 1833 - true soles [=Soleini, Synapturiniae (Synapturinae), Brachirinae, Heteromycterina, Pardachirinae, Aseraggodinae, Aseraggodinae] Notes: Soleini Bonaparte 1833: Fasc. 4, puntata 22 [ref. 516] (subfamily) Solea Synapturniae [Synapturinae] Jordan & Starks, 1906:227 [ref. 2532] (subfamily) Synaptura [von Bonde 1922:21 [ref. 520] also used Synapturniae; stem corrected to Synaptur- by Jordan 1923a:170 [ref. 2421], confirmed by Chabanaud 1927:2 [ref. 782] and by Lindberg 1971:204 [ref. 27211]; senior objective synonym of Brachirinae Ogilby, 1916] Brachirinae Ogilby, 1916:136 [ref. 3297] (subfamily) Brachirus Swainson [junior objective synonym of Synapturinae Jordan & Starks, 1906, invalid, Article 61.3.2] Heteromycterina Chabanaud, 1930a:5, 20 [ref. 784] (section) Heteromycteris Pardachirinae Chabanaud, 1937:36 [ref. 793] (subfamily) Pardachirus Aseraggodinae Ochiai, 1959:154 [ref. 32996] (subfamily) Aseraggodus [unavailable publication] Aseraggodinae Ochiai, 1963:20 [ref. 7982] (subfamily) Aseraggodus GENUS Achiroides Bleeker, 1851 - true soles [=Achiroides Bleeker [P.], 1851:262, Eurypleura Kaup [J. J.], 1858:100] Notes: [ref. 325]. Masc. Plagusia melanorhynchus Bleeker, 1851. Type by monotypy. Apparently appeared first as Achiroïdes melanorhynchus Blkr. = Plagusia melanorhynchus Blkr." Species described earlier in same journal as P. melanorhynchus (also spelled melanorhijnchus). Diagnosis provided in Bleeker 1851:404 [ref. 6831] in same journal with second species leucorhynchos added. •Valid as Achiroides Bleeker, 1851 -- (Kottelat 1989:20 [ref. 13605], Roberts 1989:183 [ref. 6439], Munroe 2001:3880 [ref. 26314], Kottelat 2013:463 [ref. 32989]). Current status: Valid as Achiroides Bleeker, 1851. Soleidae. (Eurypleura) [ref. 2578]. Fem. Plagusia melanorhynchus Bleeker, 1851. Type by being a replacement name. Unneeded substitute for Achiroides Bleeker, 1851. •Objective synonym of Achiroides Bleeker, 1851 -- (Kottelat 2013:463 [ref. -
NON-INDIGENOUS SPECIES in the MEDITERRANEAN and the BLACK SEA Carbonara, P., Follesa, M.C
Food and AgricultureFood and Agriculture General FisheriesGeneral CommissionGeneral Fisheries Fisheries Commission Commission for the Mediterraneanforfor the the Mediterranean Mediterranean Organization ofOrganization the of the Commission généraleCommissionCommission des pêches générale générale des des pêches pêches United Nations United Nations pour la Méditerranéepourpour la la Méditerranée Méditerranée STUDIES AND REVIEWS 87 ISSN 1020-9549 NON-INDIGENOUS SPECIES IN THE MEDITERRANEAN AND THE BLACK SEA Carbonara, P., Follesa, M.C. eds. 2018. Handbook on fish age determination: a Mediterranean experience. Studies and Reviews n. 98. General Fisheries Commission for the Mediterranean. Rome. pp. xxx. Cover illustration: Alberto Gennari GENERAL FISHERIES COMMISSION FOR THE MEDITERRANEAN STUDIES AND REVIEWS 87 NON-INDIGENOUS SPECIES IN THE MEDITERRANEAN AND THE BLACK SEA Bayram Öztürk FOOD AND AGRICULTURE ORGANIZATION OF THE UNITED NATIONS Rome, 2021 Required citation: Öztürk, B. 2021. Non-indigenous species in the Mediterranean and the Black Sea. Studies and Reviews No. 87 (General Fisheries Commission for the Mediterranean). Rome, FAO. https://doi.org/10.4060/cb5949en The designations employed and the presentation of material in this information product do not imply the expression of any opinion whatsoever on the part of the Food and Agriculture Organization of the United Nations (FAO) concerning the legal or development status of any country, territory, city or area or of its authorities, or concerning the delimitation of its frontiers or boundaries. Dashed lines on maps represent approximate border lines for which there may not yet be full agreement. The mention of specific companies or products of manufacturers, whether or not these have been patented, does not imply that these have been endorsed or recommended by FAO in preference to others of a similar nature that are not mentioned. -
Proteomic Approach to Flatfish Aquaculture, Study of The
DEPARTMENT of BIOCHEMISTRY and MOLECULAR BIOLOGY Doctoral Program in Biochemistry and Molecular Biology "PROTEOMIC APPROACH TO FLATFISH AQUACULTURE. STUDY OF THE REPRODUCTIVE BIOLOGY OF SOLEA SENEGALENSIS." IGNASI FORNÉ i FERRER MAY, 2007 DEPARTMENT of BIOCHEMISTRY and MOLECULAR BIOLOGY Doctoral Program in Biochemistry and Molecular Biology Doctoral thesis presented by IGNASI FORNÉ FERRER to obtain the Ph.D. IN BIOCHEMISTRY AND MOLECULAR BIOLOGY This work has been carried out in the Proteomics Laboratory CSIC/UAB and in Oryzon Genomics under the supervision of Dr. Joaquín Abian and Dr. Joan Cerdà. Ph.D. candidate Ph.D. Supervisor IGNASI FORNÉ i FERRER Dr. JOAQUIN ABIAN MOÑUX CSIC Research Scientist Department Tutor Ph.D. Supervisor Dr. JAUME FARRÉS VICÉN Dr. JOAN CERDÀ LUQUE UAB Biochemistry and Molecular IRTA Research Scientist Biology Professor Barcelona, May 2007 Veles e vents han mos desigs complir, faent camins dubtosos per la mar. Mestre i ponent contra d'ells veig armar; xaloc, llevant, los deuen subvenir ab llurs amics lo grec e lo migjorn, fent humils precs al vent tramuntanal que en son bufar los sia parcial e que tots cinc complesquen mon retorn. Bullirà el mar com la cassola en forn, mudant color e l'estat natural, e mostrarà voler tota res mal que sobre si atur un punt al jorn. Grans e pocs peixs a recors correran e cercaran amagatalls secrets: fugint al mar, on són nodrits e fets, per gran remei en terra eixiran. Ausiàs March (Veles e vents) No importa el problema, no importa la solución, me quedo con lo poco que queda, entero en el corazón. -
Towards an Early Weaning in Senegalese Sole (Solea Senegalensis Kaup, 1858)
André Filipe Gonçalves Barreto TOWARDS AN EARLY WEANING IN SENEGALESE SOLE (SOLEA SENEGALENSIS KAUP, 1858) Universidade do Algarve Master in Aquaculture and Fisheries 2017 André Filipe Gonçalves Barreto TOWARDS AN EARLY WEANING IN SENEGALESE SOLE (SOLEA SENEGALENSIS KAUP, 1858) Master in Aquaculture and Fisheries Specialization in Aquaculture Thesis supervision by: Internal coordinator: Dr. Luís Eugénio da Castanheira Conceição, PhD (Centro de Ciências do Mar - CCMAR e SPAROS Lda) External coordinator: Dr. Wilson Gabriel Poseiro Coutinho Pinto, PhD (SPAROS Lda) Universidade do Algarve Master in Aquaculture and Fisheries 2017 TOWARDS AN EARLY WEANING IN SENEGALESE SOLE (SOLEA SENEGALENSIS KAUP, 1858) Declaração de autoria de trabalho: Declaro ser o(a) autor(a) deste trabalho, que é original e inédito. Autores e trabalhos consultados estão devidamente citados no texto e constam da listagem de referências incluída. Universidade do Algarve, 29 de Setembro de 2017 __________________________________ Copyright© André Filipe Gonçalves Barreto A Universidade do Algarve reserva para si o direito, em conformidade com o disposto no Código do Direito de Autor e dos Direitos Conexos, de arquivar, reproduzir e publicar a obra, independentemente do meio utilizado, bem como de a divulgar através de repositórios científicos e de admitir a sua cópia e distribuição para fins meramente educacionais ou de investigação e não comerciais, conquanto seja dado o devido crédito ao autor e editor respectivos. Acknowledgements This thesis was supported by the project SOLEAWIN (31305/FEP/71), partially financed by the program PROMAR (Portugal) with FEDER funds. I would like to acknowledge all the people that contributed to the successful completion of this Thesis. Firstly, I would like to thank Dr. -
Significance of Metallothioneins in Differential Cadmium Accumulation
Significance of metallothioneins in differential cadmium accumulation kinetics between two marine fish species Gaël Le Croizier, Camille Lacroix, Sébastien Artigaud, Stéphane Le Floch, Jean Raffray, Virginie Penicaud, Valérie Coquillé, Julien Autier, Marie-Laure Rouget, Nicolas Le Bayon, et al. To cite this version: Gaël Le Croizier, Camille Lacroix, Sébastien Artigaud, Stéphane Le Floch, Jean Raffray, et al.. Sig- nificance of metallothioneins in differential cadmium accumulation kinetics between two marinefish species. Environmental Pollution, Elsevier, 2018, 236, pp.462-476. 10.1016/j.envpol.2018.01.002. hal-02494945 HAL Id: hal-02494945 https://hal.archives-ouvertes.fr/hal-02494945 Submitted on 26 May 2020 HAL is a multi-disciplinary open access L’archive ouverte pluridisciplinaire HAL, est archive for the deposit and dissemination of sci- destinée au dépôt et à la diffusion de documents entific research documents, whether they are pub- scientifiques de niveau recherche, publiés ou non, lished or not. The documents may come from émanant des établissements d’enseignement et de teaching and research institutions in France or recherche français ou étrangers, des laboratoires abroad, or from public or private research centers. publics ou privés. 1 Environmental Pollution Archimer May 2018, Volume 236 Pages 462-476 http://dx.doi.org/10.1016/j.envpol.2018.01.002 http://archimer.ifremer.fr http://archimer.ifremer.fr/doc/00437/54810/ © 2018 Elsevier Ltd. All rights reserved. Significance of metallothioneins in differential cadmium accumulation kinetics between two marine fish species Le Croizier Gaël 1, *, Lacroix Camille 2, Artigaud Sébastien 1, Le Floch Stéphane 2, Raffray Jean 1, Penicaud Virginie 1, Coquillé Valérie 1, Autier Julien 1, Rouget Marie-Laure 3, Le Bayon Nicolas 4, Lae Raymond 1, De Morais Luis Tito 1 1 UBO, CNRS, UMR 6539, Lab Sci Environm Marin LEMAR,IRD,IFREMER, BP 70, F-29280 Plouzane, France. -
Evidence for a Robertsonian Fusion in Solea Senegalensis (Kaup, 1858) Revealed by Zoo- FISH and Comparative Genome Analysis Aglaya García-Angulo1, Manuel A
García-Angulo et al. BMC Genomics (2018) 19:818 https://doi.org/10.1186/s12864-018-5216-6 RESEARCH ARTICLE Open Access Evidence for a Robertsonian fusion in Solea senegalensis (Kaup, 1858) revealed by zoo- FISH and comparative genome analysis Aglaya García-Angulo1, Manuel A. Merlo1, Silvia Portela-Bens1, María E. Rodríguez1, Emilio García1, Ahmed Al-Rikabi2, Thomas Liehr2 and Laureana Rebordinos1* Abstract Background: Solea senegalensis (Kaup, 1858) is a commercially important flatfish species, belonging to the Pleuronectiformes order. The taxonomy of this group has long been controversial, and the karyotype of the order presents a high degree of variability in diploid number, derived from chromosomal rearrangements such as Robertsonian fusions. Previously it has been proposed that the large metacentric chromosome of S. senegalensis arises from this kind of chromosome rearrangement and that this is a proto-sex chromosome. Results: In this work, the Robertsonian origin of the large metacentric chromosome of S. senegalensis has been tested by the Zoo-FISH technique applied to two species of the Soleidae family (Dicologlossa cuneata and Dagetichthys lusitanica), and by comparative genome analysis with Cynoglossus semilaevis. From the karyotypic analysis we were able to determine a chromosome complement comprising 2n = 50 (FN = 54) in D. cuneata and 2n = 42 (FN = 50) in D. lusitanica. The large metacentric painting probe gave consistent signals in four acrocentric chromosomes of the two Soleidae species; and the genome analysis proved a common origin with four chromosome pairs of C. semilaevis.Asa result of the genomic analysis, up to 61 genes were annotated within the thirteen Bacterial Artificial Chromosome clones analysed. -
Supplementary Materials Towards the Introduction of Sustainable Fishery Products
Supplementary Materials Towards the Introduction of Sustainable Fishery Products: The Bid of a Major Italian Retailer Sara Bonanomi1*, Alessandro Colombelli1, Loretta Malvarosa2, Maria Cozzolino2, Antonello Sala1 Affiliations: 1 Italian National Research Council (CNR), Institute of Marine Sciences (ISMAR), Largo Fiera della Pesca 1, 60125 Ancona, Italy 2 NISEA – Fisheries and Aquaculture Economic Research, Via Irno 11, 84135, Salerno, Italy * Corresponding author: Sara Bonanomi Italian National Research Council (CNR) – Institute of Marine Sciences (ISMAR), Largo Fiera della Pesca 1, 60125 Ancona, Italy Email: [email protected], Tel: +39 071 2078830 This PDF file includes: Table S1 Table S1. Fish and seafood products sold by Carrefour Italy listed according to FAO Major Fishing Area, gear type used, and IUCN conservation status and stock status. Species FAO area Gear* IUCN status Stock status Source White sturgeon 2, 5, 61, 67, 77 FIX, GEN, LX, SX, Least Concern Native populations are declining [1-4]. TX (Critically due to a continue extirpation, Acipenser transmontanus Endangered: habitat change and dam Nechako River construction. and Columbia River populations; Endangered: Kootenai River and Upper Fraser River populations; Vulnerable: Fraser population) Queen scallop 27, 34, 37 DRX, TX Not Evaluated Declining in UK. However, [5-8]. management measures such as Aequipecten opercularis seasonal fishing closure has been implemented. Thorny skate 18, 21, 27, 31, LX, SX, TX Vulnerable Often taken as bycatch in trawl [9-12]. 47 fisheries. In the northeast Amblyraja radiata Atlantic region is assessed as Least Concern. Overexploited in the North East of USA. Marbled octopus 51, 57, 61, 71 FIX, LX Not Evaluated Apparently no stock assessment [13-15]. -
Doñana and the Gulf of Cadiz | 2010
Plaza de España - Leganitos, 47 28013 Madrid (Spain) Tel.: + 34 911 440 880 Fax: + 34 911 440 890 [email protected] www.oceana.org Rue Montoyer, 39 1000 Bruselas (Belgium) Tel.: + 32 (0) 2 513 22 42 Fax: + 32 (0) 2 513 22 46 [email protected] 1350 Connecticut Ave., NW, 5th Floor Washington D.C., 20036 USA Tel.: + 1 (202) 833 3900 Fax: + 1 (202) 833 2070 [email protected] 175 South Franklin Street - Suite 418 Juneau, Alaska 99801 (USA) Tel.: + 1 (907) 586 40 50 Fax: + 1(907) 586 49 44 [email protected] Avenida General Bustamante, 24, Departamento 2C 750-0776 Providencia, Santiago (Chile) Tel.: + 56 2 795 7140 Fax: + 56 2 795 7144 [email protected] Marine protected area expansion proposal expansion area Marine protected 2010 DOÑANA AND THE GULF OF CADIZ | 2010 Marine protected area expansion proposal DOÑANA AND THE GULF OF CADIZ | DOÑANA AND THE GULF OF CADIZ The research work and this publication have been produced by Oceana with the support of the Doñana National Park council and its management bodies, as well as the Doñana Biological Station. Project Directors • Xavier Pastor Authors • Ricardo Aguilar, Enrique Pardo, María José Cornax, Silvia García, Jorge Ubero Editor • Marta Madina Editorial Assistants • Aitor Lascurain, Angela Pauly, Ángeles Sáez, Natividad Sánchez Cover • Nudibranchs (Flabellina affinis) on hydrozoan (Eudendrium cf. Racemosum). Chipiona, Cádiz, Spain. © OCEANA/ Eduardo Sorensen Design and layout • NEO Estudio Gráfico, S.L. Photo montage and printer • Imprenta Roal, S.L. Portions of this report are intellectual property of ESRI and its licensors and are used under license. -
The Case Study of Flatfish Fisheries in the Portuguese Coast
Universidade de Lisboa Faculdade de Ciências Departamento de Biologia Animal Stock assessment and management of multi-species fisheries: the case study of flatfish fisheries in the Portuguese coast Célia Maria Mascarenhas dos Santos Teixeira Doutoramento em Biologia Especialidade de Biologia Marinha e Aquacultura 2009 Universidade de Lisboa Faculdade de Ciências Departamento de Biologia Animal Stock assessment and management of multi-species fisheries: the case study of flatfish fisheries in the Portuguese coast Célia Maria Mascarenhas dos Santos Teixeira Tese orientada por Professor Doutor Henrique Nogueira Cabral Doutoramento em Biologia Especialidade de Biologia Marinha e Aquacultura 2009 To the memory of my Daddy, and to my Mummy À memória de meu Pai, e à minha Mãe TABLE OF CONTENTS TABLE OF CONTENTS Acknowledgements/Agradecimentos iii Resumo vii Summary xi List of Papers xiii Part I – General Introduction 1 Chapter 1 3 General Introduction 5 Fisheries stocks assessment and management 5 Multi-species fisheries 13 Flatfish fisheries in the Portuguese coast 16 Aims and importance of this study 17 Structure of the thesis 18 References 19 Part II – Biology and Ecology of Commercially Important 33 Flatfishes Chapter 2 35 Comparative analysis of the diet, growth and reproduction of the 37 soles, Solea solea and Solea senegalensis, occurring in sympatry along the Portuguese coast Chapter 3 59 Feeding ecology, growth and sexual cycle of the sand sole, Solea 61 lascaris, along the Portuguese coast Chapter 4 75 Diet, growth and reproduction -
Hox Genes Polymorphism Depicts Developmental Disruption of Common Sole Eggs
Open Life Sci. 2019; 14: 549–563 Research Article Menelaos Kavouras*, Emmanouil E. Malandrakis, Theodoros Danis, Ewout Blom, Konstantinos Anastassiadis, Panagiota Panagiotaki, Athanasios Exadactylos* Hox genes polymorphism depicts developmental disruption of common sole eggs https://doi.org/10.1515/biol-2019-0061 Received May 30, 2019; accepted November 22, 2019 1 Introduction Abstract: In sole aquaculture production, consistency In aquaculture industry, Solea solea is considered as in the quality of produced eggs throughout the year is one of the most interesting and promising species for unpredictable. Hox genes have a crucial role in controlling marine fish farming in Europe due to high market value embryonic development and their genetic variation could and consumers demand. Rearing is mainly based on alter the phenotype dramatically. In teleosts genome controlled reproduction of captive breeders [1]. The steady duplication led paralog hox genes to become diverged. production of eggs either in quality and quantity all year Direct association of polymorphism in hoxa1a, hoxa2a & round is necessary for successful mass production of hoxa2b of Solea solea with egg viability indicates hoxa2b juveniles [2, 3]. Despite the progress that has been achieved as a potential genetic marker. High Resolution Melt (HRM) all these years on the rearing and welfare conditions of analysis was carried out in 52 viable and 61 non-viable eggs sole spawners [1, 3–7], manipulated broodstocks are still collected at 54±6 hours post fertilization (hpf). Allelic and producing eggs which present variability both in quantity genotypic frequencies of polymorphism were analyzed and quality, boosting the overall production cost of sole and results illustrated a significantly increased risk for [8].