New Records of Pyrenocarpous Lichenized Fungi from Bulgaria
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Opuscula Philolichenum, 6: 1-XXXX
Opuscula Philolichenum, 15: 56-81. 2016. *pdf effectively published online 25July2016 via (http://sweetgum.nybg.org/philolichenum/) Lichens, lichenicolous fungi, and allied fungi of Pipestone National Monument, Minnesota, U.S.A., revisited M.K. ADVAITA, CALEB A. MORSE1,2 AND DOUGLAS LADD3 ABSTRACT. – A total of 154 lichens, four lichenicolous fungi, and one allied fungus were collected by the authors from 2004 to 2015 from Pipestone National Monument (PNM), in Pipestone County, on the Prairie Coteau of southwestern Minnesota. Twelve additional species collected by previous researchers, but not found by the authors, bring the total number of taxa known for PNM to 171. This represents a substantial increase over previous reports for PNM, likely due to increased intensity of field work, and also to the marked expansion of corticolous and anthropogenic substrates since the site was first surveyed in 1899. Reexamination of 116 vouchers deposited in MIN and the PNM herbarium led to the exclusion of 48 species previously reported from the site. Crustose lichens are the most common growth form, comprising 65% of the lichen diversity. Sioux Quartzite provided substrate for 43% of the lichen taxa collected. Saxicolous lichen communities were characterized by sampling four transects on cliff faces and low outcrops. An annotated checklist of the lichens of the site is provided, as well as a list of excluded taxa. We report 24 species (including 22 lichens and two lichenicolous fungi) new for Minnesota: Acarospora boulderensis, A. contigua, A. erythrophora, A. strigata, Agonimia opuntiella, Arthonia clemens, A. muscigena, Aspicilia americana, Bacidina delicata, Buellia tyrolensis, Caloplaca flavocitrina, C. lobulata, C. -
Lichens and Associated Fungi from Glacier Bay National Park, Alaska
The Lichenologist (2020), 52,61–181 doi:10.1017/S0024282920000079 Standard Paper Lichens and associated fungi from Glacier Bay National Park, Alaska Toby Spribille1,2,3 , Alan M. Fryday4 , Sergio Pérez-Ortega5 , Måns Svensson6, Tor Tønsberg7, Stefan Ekman6 , Håkon Holien8,9, Philipp Resl10 , Kevin Schneider11, Edith Stabentheiner2, Holger Thüs12,13 , Jan Vondrák14,15 and Lewis Sharman16 1Department of Biological Sciences, CW405, University of Alberta, Edmonton, Alberta T6G 2R3, Canada; 2Department of Plant Sciences, Institute of Biology, University of Graz, NAWI Graz, Holteigasse 6, 8010 Graz, Austria; 3Division of Biological Sciences, University of Montana, 32 Campus Drive, Missoula, Montana 59812, USA; 4Herbarium, Department of Plant Biology, Michigan State University, East Lansing, Michigan 48824, USA; 5Real Jardín Botánico (CSIC), Departamento de Micología, Calle Claudio Moyano 1, E-28014 Madrid, Spain; 6Museum of Evolution, Uppsala University, Norbyvägen 16, SE-75236 Uppsala, Sweden; 7Department of Natural History, University Museum of Bergen Allégt. 41, P.O. Box 7800, N-5020 Bergen, Norway; 8Faculty of Bioscience and Aquaculture, Nord University, Box 2501, NO-7729 Steinkjer, Norway; 9NTNU University Museum, Norwegian University of Science and Technology, NO-7491 Trondheim, Norway; 10Faculty of Biology, Department I, Systematic Botany and Mycology, University of Munich (LMU), Menzinger Straße 67, 80638 München, Germany; 11Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK; 12Botany Department, State Museum of Natural History Stuttgart, Rosenstein 1, 70191 Stuttgart, Germany; 13Natural History Museum, Cromwell Road, London SW7 5BD, UK; 14Institute of Botany of the Czech Academy of Sciences, Zámek 1, 252 43 Průhonice, Czech Republic; 15Department of Botany, Faculty of Science, University of South Bohemia, Branišovská 1760, CZ-370 05 České Budějovice, Czech Republic and 16Glacier Bay National Park & Preserve, P.O. -
Photobiont Relationships and Phylogenetic History of Dermatocarpon Luridum Var
Plants 2012, 1, 39-60; doi:10.3390/plants1020039 OPEN ACCESS plants ISSN 2223-7747 www.mdpi.com/journal/plants Article Photobiont Relationships and Phylogenetic History of Dermatocarpon luridum var. luridum and Related Dermatocarpon Species Kyle M. Fontaine 1, Andreas Beck 2, Elfie Stocker-Wörgötter 3 and Michele D. Piercey-Normore 1,* 1 Department of Biological Sciences, University of Manitoba, Winnipeg, Manitoba, R3T 2N2, Canada; E-Mail: [email protected] 2 Botanische Staatssammlung München, Menzinger Strasse 67, D-80638 München, Germany; E-Mail: [email protected] 3 Department of Organismic Biology, Ecology and Diversity of Plants, University of Salzburg, Hellbrunner Strasse 34, A-5020 Salzburg, Austria; E-Mail: [email protected] * Author to whom correspondence should be addressed; E-Mail: Michele.Piercey-Normore@ad. umanitoba.ca; Tel.: +1-204-474-9610; Fax: +1-204-474-7588. Received: 31 July 2012; in revised form: 11 September 2012 / Accepted: 25 September 2012 / Published: 10 October 2012 Abstract: Members of the genus Dermatocarpon are widespread throughout the Northern Hemisphere along the edge of lakes, rivers and streams, and are subject to abiotic conditions reflecting both aquatic and terrestrial environments. Little is known about the evolutionary relationships within the genus and between continents. Investigation of the photobiont(s) associated with sub-aquatic and terrestrial Dermatocarpon species may reveal habitat requirements of the photobiont and the ability for fungal species to share the same photobiont species under different habitat conditions. The focus of our study was to determine the relationship between Canadian and Austrian Dermatocarpon luridum var. luridum along with three additional sub-aquatic Dermatocarpon species, and to determine the species of photobionts that associate with D. -
Generic Classification of the Verrucariaceae TAXON 58 (1) • February 2009: 184–208
Gueidan & al. • Generic classification of the Verrucariaceae TAXON 58 (1) • February 2009: 184–208 TAXONOMY Generic classification of the Verrucariaceae (Ascomycota) based on molecular and morphological evidence: recent progress and remaining challenges Cécile Gueidan1,16, Sanja Savić2, Holger Thüs3, Claude Roux4, Christine Keller5, Leif Tibell2, Maria Prieto6, Starri Heiðmarsson7, Othmar Breuss8, Alan Orange9, Lars Fröberg10, Anja Amtoft Wynns11, Pere Navarro-Rosinés12, Beata Krzewicka13, Juha Pykälä14, Martin Grube15 & François Lutzoni16 1 Centraalbureau voor Schimmelcultures, P.O. Box 85167, 3508 AD Utrecht, the Netherlands. c.gueidan@ cbs.knaw.nl (author for correspondence) 2 Uppsala University, Evolutionary Biology Centre, Department of Systematic Botany, Norbyvägen 18D, 752 36 Uppsala, Sweden 3 Botany Department, Natural History Museum, Cromwell Road, London, SW7 5BD, U.K. 4 Chemin des Vignes vieilles, 84120 Mirabeau, France 5 Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Zürcherstrasse 111, 8903 Birmensdorf, Switzerland 6 Universidad Rey Juan Carlos, ESCET, Área de Biodiversidad y Conservación, c/ Tulipán s/n, 28933 Móstoles, Madrid, Spain 7 Icelandic Institute of Natural History, Akureyri division, P.O. Box 180, 602 Akureyri, Iceland 8 Naturhistorisches Museum Wien, Botanische Abteilung, Burgring 7, 1010 Wien, Austria 9 Department of Biodiversity and Systematic Biology, National Museum of Wales, Cathays Park, Cardiff CF10 3NP, U.K. 10 Botanical Museum, Östra Vallgatan 18, 223 61 Lund, Sweden 11 Institute for Ecology, Department of Zoology, Copenhagen University, Thorvaldsensvej 40, 1871 Frederiksberg C, Denmark 12 Departament de Biologia Vegetal (Botànica), Facultat de Biologia, Universitat de Barcelona, Diagonal 645, 08028 Barcelona, Spain 13 Laboratory of Lichenology, Institute of Botany, Polish Academy of Sciences, Lubicz 46, 31-512 Kraków, Poland 14 Finnish Environment Institute, Research Programme for Biodiversity, P.O. -
Piedmont Lichen Inventory
PIEDMONT LICHEN INVENTORY: BUILDING A LICHEN BIODIVERSITY BASELINE FOR THE PIEDMONT ECOREGION OF NORTH CAROLINA, USA By Gary B. Perlmutter B.S. Zoology, Humboldt State University, Arcata, CA 1991 A Thesis Submitted to the Staff of The North Carolina Botanical Garden University of North Carolina at Chapel Hill Advisor: Dr. Johnny Randall As Partial Fulfilment of the Requirements For the Certificate in Native Plant Studies 15 May 2009 Perlmutter – Piedmont Lichen Inventory Page 2 This Final Project, whose results are reported herein with sections also published in the scientific literature, is dedicated to Daniel G. Perlmutter, who urged that I return to academia. And to Theresa, Nichole and Dakota, for putting up with my passion in lichenology, which brought them from southern California to the Traingle of North Carolina. TABLE OF CONTENTS Introduction……………………………………………………………………………………….4 Chapter I: The North Carolina Lichen Checklist…………………………………………………7 Chapter II: Herbarium Surveys and Initiation of a New Lichen Collection in the University of North Carolina Herbarium (NCU)………………………………………………………..9 Chapter III: Preparatory Field Surveys I: Battle Park and Rock Cliff Farm……………………13 Chapter IV: Preparatory Field Surveys II: State Park Forays…………………………………..17 Chapter V: Lichen Biota of Mason Farm Biological Reserve………………………………….19 Chapter VI: Additional Piedmont Lichen Surveys: Uwharrie Mountains…………………...…22 Chapter VII: A Revised Lichen Inventory of North Carolina Piedmont …..…………………...23 Acknowledgements……………………………………………………………………………..72 Appendices………………………………………………………………………………….…..73 Perlmutter – Piedmont Lichen Inventory Page 4 INTRODUCTION Lichens are composite organisms, consisting of a fungus (the mycobiont) and a photosynthesising alga and/or cyanobacterium (the photobiont), which together make a life form that is distinct from either partner in isolation (Brodo et al. -
Heidmarssonetal2017.Pdf
Phytotaxa 306 (1): 037–048 ISSN 1179-3155 (print edition) http://www.mapress.com/j/pt/ PHYTOTAXA Copyright © 2017 Magnolia Press Article ISSN 1179-3163 (online edition) https://doi.org/10.11646/phytotaxa.306.1.3 Multi-locus phylogeny supports the placement of Endocarpon pulvinatum within Staurothele s. str. (lichenised ascomycetes, Eurotiomycetes, Verrucariaceae) STARRI HEIÐMARSSON1, CÉCILE GUEIDAN2,3, JOLANTA MIADLIKOWSKA4 & FRANÇOIS LUTZONI4 1 Icelandic Institute of Natural History, Akureyri division, Borgir Nordurslod, 600 Akureyri, Iceland ([email protected]) 2 Australian National Herbarium, National Research Collections Australia, CSIRO-NCMI, PO Box 1700, Canberra, ACT 2601, Aus- tralia ([email protected]) 3 Department of Life Sciences, Natural History Museum, Cromwell road, SW7 5BD London, United Kingdom 4 Department of Biology, Duke University, Durham, NC 27708-0338, USA ([email protected], [email protected]) Abstract Within the lichen family Verrucariaceae, the genera Endocarpon, Willeya and Staurothele are characterised by muriform ascospores and the presence of algal cells in the hymenium. Endocarpon thalli are squamulose to subfruticose, whereas Willeya and Staurothele include only crustose species. Endocarpon pulvinatum, an arctic-alpine species newly reported for Iceland, is one of the few Endocarpon with a subfruticose thallus formed by long and narrow erected squamules. Molecular phylogenetic analyses of four loci (ITS, nrLSU, mtSSU, and mcm7) newly obtained from E. pulvinatum specimens from Iceland, Finland and North America does not confirm its current classification within the mostly squamulose genus Endocar- pon, but instead supports its placement within the crustose genus Staurothele. The new combination Staurothele pulvinata is therefore proposed here. It includes also E. tortuosum, which was confirmed as a synonym of E. -
(Published Version): Phylog
Dieses Dokument ist eine Zweitveröffentlichung (Verlagsversion) / This is a self-archiving document (published version): Cécile Gueidan, Truong Van Do, Ngan Thi Lu Phylogeny and taxonomy of Staurothele (Verrucariaceae, lichenized ascomycetes) from the karst of northern Vietnam Erstveröffentlichung in / First published in: The Lichenologist. 2014, 46(4), S. 515 – 533 [Zugriff am: 11.03.2020]. Cambridge University Press. ISSN 1096-1135. DOI: https://doi.org/10.1017/S0024282914000048 Diese Version ist verfügbar / This version is available on: https://nbn-resolving.org/urn:nbn:de:bsz:14-qucosa2-390096 „Dieser Beitrag ist mit Zustimmung des Rechteinhabers aufgrund einer (DFGgeförderten) Allianz- bzw. Nationallizenz frei zugänglich.“ This publication is openly accessible with the permission of the copyright owner. The permission is granted within a nationwide license, supported by the German Research Foundation (abbr. in German DFG). www.nationallizenzen.de/ The Lichenologist 46(4): 515–533 (2014) 6 British Lichen Society, 2014 doi:10.1017/S0024282914000048 Phylogeny and taxonomy of Staurothele (Verrucariaceae, lichenized ascomycetes) from the karst of northern Vietnam Ce´cile GUEIDAN, Truong VAN DO and Ngan Thi LU Abstract: The crustose genus Staurothele (Verrucariaceae, Ascomycota) is a common component of the lichen flora from subneutral to alkaline silicate rocks in temperate to cold-temperate climates. Our field study in the karst system of northern Vietnam showed that it is also common on dry to humid limestone in the wet tropics. Molecular data revealed that species of Staurothele from Vietnam belong to an unnamed clade sister to the genus Endocarpon, together with the tropical Australian species Staurothele pallidopora and Staurothele diffractella, a North American species recently transferred to Endocarpon based on molecular data. -
Lichenised Ascomycotina, Verrucariales)
©Österreichische Mykologische Gesellschaft, Austria, download unter www.biologiezentrum.at Österr. Z. Pilzk. 20 (2011) 29 Notes on some rare Verrucaria species (lichenised Ascomycotina, Verrucariales) JUHA PYKÄLÄ Finnish Environment Institute, Natural Environment Centre P. O. Box 140 FI-00251 Helsinki, Finland Email: [email protected] OTHMAR BREUSS Naturhistorisches Museum Wien, Botanische Abteilung Burgring 7 A-1010 Wien, Austria Email: [email protected] Accepted 13. 10. 2011 Key words: Pyrenocarpous lichens, Verrucariacae. – Taxonomy, systematics. – Mycoflora of Fennoscandia. Abstract: Verrucaria cincta and V. putnae are reported for the first time from Fennoscandia; V. dalslandensis is new to Finland and Austria. Verrucaria scabridula is synonymized with V. subfus- cata, and Verrucaria olivacella with V. inaspecta. Verrucaria inaspecta and V. scabridula are lectotypified. The type material of V. gotlandica includes four Verrucaria species. Zusammenfassung: Verrucaria cincta und V. putnae werden erstmals aus Fenno-Skandien gemeldet; V. dalslandensis ist neu für Finnland und Österreich. Verrucaria scabridula wird mit V. subfuscata und Verrucaria olivacella mit V. inaspecta synonymisiert. Verrucaria inaspecta und V. scabridula werden lectotypifiziert. Das Typusmaterial von V. gotlandica enthält vier Verrucaria-Arten. Calcareous rocks are very rich in Verrucaria species in Fennoscandia. Numerous spe- cies new to Fennoscandia have been previously reported (PYKÄLÄ 2007, 2008, 2010 a, b, c; PYKÄLÄ &BREUSS 2008, 2009). However, the Verrucaria flora of calcareous rocks is still somewhat poorly known, and many unidentified species occur. In the pre- sent paper we report three globally rarely collected species as new to Fennoscandia or Finland. Furthermore, the identity of three species originally described from Sweden (MAGNUSSON 1952, SERVÍT 1952) and later mostly neglected, is clarified. -
High-Level Classification of the Fungi and a Tool for Evolutionary Ecological Analyses
Fungal Diversity (2018) 90:135–159 https://doi.org/10.1007/s13225-018-0401-0 (0123456789().,-volV)(0123456789().,-volV) High-level classification of the Fungi and a tool for evolutionary ecological analyses 1,2,3 4 1,2 3,5 Leho Tedersoo • Santiago Sa´nchez-Ramı´rez • Urmas Ko˜ ljalg • Mohammad Bahram • 6 6,7 8 5 1 Markus Do¨ ring • Dmitry Schigel • Tom May • Martin Ryberg • Kessy Abarenkov Received: 22 February 2018 / Accepted: 1 May 2018 / Published online: 16 May 2018 Ó The Author(s) 2018 Abstract High-throughput sequencing studies generate vast amounts of taxonomic data. Evolutionary ecological hypotheses of the recovered taxa and Species Hypotheses are difficult to test due to problems with alignments and the lack of a phylogenetic backbone. We propose an updated phylum- and class-level fungal classification accounting for monophyly and divergence time so that the main taxonomic ranks are more informative. Based on phylogenies and divergence time estimates, we adopt phylum rank to Aphelidiomycota, Basidiobolomycota, Calcarisporiellomycota, Glomeromycota, Entomoph- thoromycota, Entorrhizomycota, Kickxellomycota, Monoblepharomycota, Mortierellomycota and Olpidiomycota. We accept nine subkingdoms to accommodate these 18 phyla. We consider the kingdom Nucleariae (phyla Nuclearida and Fonticulida) as a sister group to the Fungi. We also introduce a perl script and a newick-formatted classification backbone for assigning Species Hypotheses into a hierarchical taxonomic framework, using this or any other classification system. We provide an example -
MYCOTAXON Volume 100, Pp
MYCOTAXON Volume 100, pp. 337–342 April–June 2007 Endococcus variabilis, a new species on Staurothele areolata Mehmet Gökhan Halıcı1, Jana Kocourková2, Paul Dıederıch3 & Ahmet Aksoy4 [email protected] [email protected] Erciyes University, Fen Edebiyat Fakültesi, Biyoloji Bölümü 38039 Kayseri, Turkey [email protected] National Museum, Václavské nám. 68 115 79 Praha, Czech Republic [email protected] Musée national d’histoire naturelle 25 rue Munster, L-2160 Luxembourg Abstract—Endococcus variabilis is described as a new species from the thallus of Staurothele areolata in Turkey and Austria. It differs from most other species of the genus in the 4–6(–8) spored asci and verrucose ascospores, from E. zahlbrucknerellae in ascomatal and ascospore size, and from all known species by the host selection. Key words—lichenicolous fungi, Dothideales, Ascomycota Introduction The genus Endococcus comprises at least 37 species occurring on a wide range of crustose, foliose, and fruticose lichens. The species have been revised by Hawksworth (1979) and Triebel (1989, only lecideicolous species), but many others have been recognized since those works. Recent collections from Turkey and Austria of a species on Staurothele areolata differ significantly from previously described taxa and are described here as a new species. Material and methods The type specimen of the new species is deposited in ANES. It was examined by standard microscopic techniques, and drawings were made using a drawing tube. Sections were prepared by hand and examined in Congo red (1% solution in water, mixed 1:1 with 10% KOH), I (Lugol’s iodine: I 0.5 g, KI 1.5 g, water 338 .. -
Ascomyceteorg 09-04 Ascomyceteorg
Further interesting lichens and lichenicolous fungi from Fuer- teventura, Canary Islands (Spain), with three new species and notes on Mixtoconidium Pieter P.G. VAN DEN BOOM Abstract: Fifty-two taxa of lichens and lichenicolous fungi from Fuerteventura (Canary Islands) are presented Javier ETAYO as a result of recent fieldwork. For each taxon, information about habitat and substrata is given. Forty-seven species are newly recorded from the island, including the rare lichenicolous fungi Arthonia follmanniana and Stigmidium epistigmellum, the latter previously only known from America, and three new species described here: Lecania euphorbiae, Staurothele alboterrestris and Stigmidium seirophorae. The new combination Va- Ascomycete.org, 9 (4) : 124-134. riospora fuerteventurae is proposed for Caloplaca fuerteventurae. In a revision of the genus Mixtoconidium Juillet 2017 the new combinations Mixtoconidium insidens and M. nashii are proposed. Mise en ligne le 19/07/2017 Keywords: biodiversity, Macaronesia, mycoflora, new records, taxonomy. Resumen: Se señalan cincuenta y dos taxones de líquenes y hongos liquenícolas procedentes de Fuerte- ventura (islas Canarias). De cada taxón se aporta información sobre hábitat y sustrato. Cuarenta y siete es- pecies se señalan por primera vez para la isla, incluyendo los hongos liquenícolas poco frecuentes Arthonia follmanniana y Stigmidium epistigmellum, este último previamente conocido sólo de América, así como tres nuevas especies descritas en este trabajo: Lecania euphorbiae, Staurothele alboterrestris y Stigmidium seiro- phorae. Se propone la nueva combinación Variospora fuerteventurae para la anteriormente denominada Ca- loplaca fuerteventurae. También se revisa el género Mixtoconidium y se proponen las combinaciones Mixtoconidium insidens y M. nashii. Palabras clave: biodiversidad, Macaronesia, micoflora, nuevas citas, taxonomía. -
Two New Species of Endocarpon (Verrucariaceae, Ascomycota)
www.nature.com/scientificreports OPEN Two new species of Endocarpon (Verrucariaceae, Ascomycota) from China Received: 10 January 2017 Tao Zhang1, Meng Liu1, Yan-Yan Wang1, Zhi-Jun Wang1,2, Xin-Li Wei1 & Jiang-Chun Wei1,3 Accepted: 3 July 2017 Endocarpon species are key components of biological soil crusts. Phenotypic and systematic molecular Published: xx xx xxxx analyses were carried out to identify samples of Endocarpon collected from the southeast edge of the Tengger Desert in China. These morphological and molecular analyses revealed two previously undescribed species that form highly supported independent monophyletic clades within Endocarpon. The new taxa were named Endocarpon deserticola sp. nov. and E. unifoliatum sp. nov. Furthermore, our results indicated that the newly developed protein coding markers adenylate kinase (ADK) and ubiquitin-conjugating enzyme h (UCEH) are useful for assessing species boundaries in phylogenic analyses. Biological soil crusts (BSCs) are intimate association between soil particles and biological communities com- posed of mosses, lichens, cyanobacteria and heterotrophs living at the soil surface1, 2. Soil particles are aggregated through the presence and activity of the biota mentioned above, and the resultant living crusts cover more than 40% of the Earth’s terrestrial surface as a coherent layer1, 2. BSCs play an important role in carbon and nitrogen fxation and soil stabilization of desert ecosystems2–4. According to the existence of diferent dominant species during the development of BSCs, it could be mainly divided into algae crust, lichen crust and moss crust5, among which the lichen crust is more compact and has stronger ability in carbon and nitrogen fxation6.