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Opuscula Philolichenum, 6: 1-XXXX
Opuscula Philolichenum, 15: 56-81. 2016. *pdf effectively published online 25July2016 via (http://sweetgum.nybg.org/philolichenum/) Lichens, lichenicolous fungi, and allied fungi of Pipestone National Monument, Minnesota, U.S.A., revisited M.K. ADVAITA, CALEB A. MORSE1,2 AND DOUGLAS LADD3 ABSTRACT. – A total of 154 lichens, four lichenicolous fungi, and one allied fungus were collected by the authors from 2004 to 2015 from Pipestone National Monument (PNM), in Pipestone County, on the Prairie Coteau of southwestern Minnesota. Twelve additional species collected by previous researchers, but not found by the authors, bring the total number of taxa known for PNM to 171. This represents a substantial increase over previous reports for PNM, likely due to increased intensity of field work, and also to the marked expansion of corticolous and anthropogenic substrates since the site was first surveyed in 1899. Reexamination of 116 vouchers deposited in MIN and the PNM herbarium led to the exclusion of 48 species previously reported from the site. Crustose lichens are the most common growth form, comprising 65% of the lichen diversity. Sioux Quartzite provided substrate for 43% of the lichen taxa collected. Saxicolous lichen communities were characterized by sampling four transects on cliff faces and low outcrops. An annotated checklist of the lichens of the site is provided, as well as a list of excluded taxa. We report 24 species (including 22 lichens and two lichenicolous fungi) new for Minnesota: Acarospora boulderensis, A. contigua, A. erythrophora, A. strigata, Agonimia opuntiella, Arthonia clemens, A. muscigena, Aspicilia americana, Bacidina delicata, Buellia tyrolensis, Caloplaca flavocitrina, C. lobulata, C. -
Revision of the Verrucaria Elaeomelaena Species Complex and Morphologically Similar Freshwater Lichens (Verrucariaceae, Ascomycota)
Phytotaxa 197 (3): 161–185 ISSN 1179-3155 (print edition) www.mapress.com/phytotaxa/ PHYTOTAXA Copyright © 2015 Magnolia Press Article ISSN 1179-3163 (online edition) http://dx.doi.org/10.11646/phytotaxa.197.3.1 Revision of the Verrucaria elaeomelaena species complex and morphologically similar freshwater lichens (Verrucariaceae, Ascomycota) THÜS, H.1, ORANGE, A.2, GUEIDAN, C.1,3, PYKÄLÄ, J.4, RUBERti, C.5, Lo SCHIAVO, F.5 & NAscimBENE, J.5 1Life Sciences Department, The Natural History Museum, Cromwell Road, London SW7 5BD, United Kingdom. [email protected] 2Department of Biodiversity and Systematic Biology, National Museum Wales, Cathays Park, Cardiff CF10 3NP, United Kingdom. 3CSIRO, NRCA, Australian National Herbarium, GPO Box 1600, Canberra ACT 2601 Australia (current address) 4Finnish Environment Institute, Natural Environment Centre, P.O. Box 140, FI-00251 Helsinki, Finland. 5Department of Biology, University of Padua, via Ugo Bassi 58/b, 35121, Padova Abstract The freshwater lichens Verrucaria elaeomelaena, V. alpicola, and V. funckii (Verrucariaceae/Ascomycota) have long been confused with V. margacea and V. placida and conclusions on the substratum preference and distribution have been obscured due to misidentifications. Independent phylogenetic analyses of a multigene dataset (RPB1, mtSSU, nuLSU) and an ITS- dataset combined with morphological and ecological characters confirm that the Verrucaria elaeomelaena agg. consists of several cryptic taxa. It includes V. elaeomelaena s.str. with mostly grey to mid-brown thalli and transparent exciple base which cannot be distinguished morphologically from several other unnamed clades from low elevations, the semi-cryptic V. humida spec. nov., which is characterised by smaller perithecia, shorter and more elongated spores compared to other species in this group and V. -
Lichens and Associated Fungi from Glacier Bay National Park, Alaska
The Lichenologist (2020), 52,61–181 doi:10.1017/S0024282920000079 Standard Paper Lichens and associated fungi from Glacier Bay National Park, Alaska Toby Spribille1,2,3 , Alan M. Fryday4 , Sergio Pérez-Ortega5 , Måns Svensson6, Tor Tønsberg7, Stefan Ekman6 , Håkon Holien8,9, Philipp Resl10 , Kevin Schneider11, Edith Stabentheiner2, Holger Thüs12,13 , Jan Vondrák14,15 and Lewis Sharman16 1Department of Biological Sciences, CW405, University of Alberta, Edmonton, Alberta T6G 2R3, Canada; 2Department of Plant Sciences, Institute of Biology, University of Graz, NAWI Graz, Holteigasse 6, 8010 Graz, Austria; 3Division of Biological Sciences, University of Montana, 32 Campus Drive, Missoula, Montana 59812, USA; 4Herbarium, Department of Plant Biology, Michigan State University, East Lansing, Michigan 48824, USA; 5Real Jardín Botánico (CSIC), Departamento de Micología, Calle Claudio Moyano 1, E-28014 Madrid, Spain; 6Museum of Evolution, Uppsala University, Norbyvägen 16, SE-75236 Uppsala, Sweden; 7Department of Natural History, University Museum of Bergen Allégt. 41, P.O. Box 7800, N-5020 Bergen, Norway; 8Faculty of Bioscience and Aquaculture, Nord University, Box 2501, NO-7729 Steinkjer, Norway; 9NTNU University Museum, Norwegian University of Science and Technology, NO-7491 Trondheim, Norway; 10Faculty of Biology, Department I, Systematic Botany and Mycology, University of Munich (LMU), Menzinger Straße 67, 80638 München, Germany; 11Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK; 12Botany Department, State Museum of Natural History Stuttgart, Rosenstein 1, 70191 Stuttgart, Germany; 13Natural History Museum, Cromwell Road, London SW7 5BD, UK; 14Institute of Botany of the Czech Academy of Sciences, Zámek 1, 252 43 Průhonice, Czech Republic; 15Department of Botany, Faculty of Science, University of South Bohemia, Branišovská 1760, CZ-370 05 České Budějovice, Czech Republic and 16Glacier Bay National Park & Preserve, P.O. -
Photobiont Relationships and Phylogenetic History of Dermatocarpon Luridum Var
Plants 2012, 1, 39-60; doi:10.3390/plants1020039 OPEN ACCESS plants ISSN 2223-7747 www.mdpi.com/journal/plants Article Photobiont Relationships and Phylogenetic History of Dermatocarpon luridum var. luridum and Related Dermatocarpon Species Kyle M. Fontaine 1, Andreas Beck 2, Elfie Stocker-Wörgötter 3 and Michele D. Piercey-Normore 1,* 1 Department of Biological Sciences, University of Manitoba, Winnipeg, Manitoba, R3T 2N2, Canada; E-Mail: [email protected] 2 Botanische Staatssammlung München, Menzinger Strasse 67, D-80638 München, Germany; E-Mail: [email protected] 3 Department of Organismic Biology, Ecology and Diversity of Plants, University of Salzburg, Hellbrunner Strasse 34, A-5020 Salzburg, Austria; E-Mail: [email protected] * Author to whom correspondence should be addressed; E-Mail: Michele.Piercey-Normore@ad. umanitoba.ca; Tel.: +1-204-474-9610; Fax: +1-204-474-7588. Received: 31 July 2012; in revised form: 11 September 2012 / Accepted: 25 September 2012 / Published: 10 October 2012 Abstract: Members of the genus Dermatocarpon are widespread throughout the Northern Hemisphere along the edge of lakes, rivers and streams, and are subject to abiotic conditions reflecting both aquatic and terrestrial environments. Little is known about the evolutionary relationships within the genus and between continents. Investigation of the photobiont(s) associated with sub-aquatic and terrestrial Dermatocarpon species may reveal habitat requirements of the photobiont and the ability for fungal species to share the same photobiont species under different habitat conditions. The focus of our study was to determine the relationship between Canadian and Austrian Dermatocarpon luridum var. luridum along with three additional sub-aquatic Dermatocarpon species, and to determine the species of photobionts that associate with D. -
Generic Classification of the Verrucariaceae TAXON 58 (1) • February 2009: 184–208
Gueidan & al. • Generic classification of the Verrucariaceae TAXON 58 (1) • February 2009: 184–208 TAXONOMY Generic classification of the Verrucariaceae (Ascomycota) based on molecular and morphological evidence: recent progress and remaining challenges Cécile Gueidan1,16, Sanja Savić2, Holger Thüs3, Claude Roux4, Christine Keller5, Leif Tibell2, Maria Prieto6, Starri Heiðmarsson7, Othmar Breuss8, Alan Orange9, Lars Fröberg10, Anja Amtoft Wynns11, Pere Navarro-Rosinés12, Beata Krzewicka13, Juha Pykälä14, Martin Grube15 & François Lutzoni16 1 Centraalbureau voor Schimmelcultures, P.O. Box 85167, 3508 AD Utrecht, the Netherlands. c.gueidan@ cbs.knaw.nl (author for correspondence) 2 Uppsala University, Evolutionary Biology Centre, Department of Systematic Botany, Norbyvägen 18D, 752 36 Uppsala, Sweden 3 Botany Department, Natural History Museum, Cromwell Road, London, SW7 5BD, U.K. 4 Chemin des Vignes vieilles, 84120 Mirabeau, France 5 Swiss Federal Institute for Forest, Snow and Landscape Research WSL, Zürcherstrasse 111, 8903 Birmensdorf, Switzerland 6 Universidad Rey Juan Carlos, ESCET, Área de Biodiversidad y Conservación, c/ Tulipán s/n, 28933 Móstoles, Madrid, Spain 7 Icelandic Institute of Natural History, Akureyri division, P.O. Box 180, 602 Akureyri, Iceland 8 Naturhistorisches Museum Wien, Botanische Abteilung, Burgring 7, 1010 Wien, Austria 9 Department of Biodiversity and Systematic Biology, National Museum of Wales, Cathays Park, Cardiff CF10 3NP, U.K. 10 Botanical Museum, Östra Vallgatan 18, 223 61 Lund, Sweden 11 Institute for Ecology, Department of Zoology, Copenhagen University, Thorvaldsensvej 40, 1871 Frederiksberg C, Denmark 12 Departament de Biologia Vegetal (Botànica), Facultat de Biologia, Universitat de Barcelona, Diagonal 645, 08028 Barcelona, Spain 13 Laboratory of Lichenology, Institute of Botany, Polish Academy of Sciences, Lubicz 46, 31-512 Kraków, Poland 14 Finnish Environment Institute, Research Programme for Biodiversity, P.O. -
A Rock-Inhabiting Ancestor for Mutualistic and Pathogen-Rich Fungal Lineages
UvA-DARE (Digital Academic Repository) A rock-inhabiting ancestor for mutualistic and pathogen-rich fungal lineages Gueidan, C.; Ruibal Villaseñor, C.; de Hoog, G.S.; Gorbushina, A.A.; Untereiner, W.A.; Lutzoni, F. DOI 10.3114/sim.2008.61.11 Publication date 2008 Document Version Final published version Published in Studies in Mycology Link to publication Citation for published version (APA): Gueidan, C., Ruibal Villaseñor, C., de Hoog, G. S., Gorbushina, A. A., Untereiner, W. A., & Lutzoni, F. (2008). A rock-inhabiting ancestor for mutualistic and pathogen-rich fungal lineages. Studies in Mycology, 61(1), 111-119. https://doi.org/10.3114/sim.2008.61.11 General rights It is not permitted to download or to forward/distribute the text or part of it without the consent of the author(s) and/or copyright holder(s), other than for strictly personal, individual use, unless the work is under an open content license (like Creative Commons). Disclaimer/Complaints regulations If you believe that digital publication of certain material infringes any of your rights or (privacy) interests, please let the Library know, stating your reasons. In case of a legitimate complaint, the Library will make the material inaccessible and/or remove it from the website. Please Ask the Library: https://uba.uva.nl/en/contact, or a letter to: Library of the University of Amsterdam, Secretariat, Singel 425, 1012 WP Amsterdam, The Netherlands. You will be contacted as soon as possible. UvA-DARE is a service provided by the library of the University of Amsterdam (https://dare.uva.nl) Download date:30 Sep 2021 available online at www.studiesinmycology.org STUDIE S IN MYCOLOGY 61: 111–119. -
Piedmont Lichen Inventory
PIEDMONT LICHEN INVENTORY: BUILDING A LICHEN BIODIVERSITY BASELINE FOR THE PIEDMONT ECOREGION OF NORTH CAROLINA, USA By Gary B. Perlmutter B.S. Zoology, Humboldt State University, Arcata, CA 1991 A Thesis Submitted to the Staff of The North Carolina Botanical Garden University of North Carolina at Chapel Hill Advisor: Dr. Johnny Randall As Partial Fulfilment of the Requirements For the Certificate in Native Plant Studies 15 May 2009 Perlmutter – Piedmont Lichen Inventory Page 2 This Final Project, whose results are reported herein with sections also published in the scientific literature, is dedicated to Daniel G. Perlmutter, who urged that I return to academia. And to Theresa, Nichole and Dakota, for putting up with my passion in lichenology, which brought them from southern California to the Traingle of North Carolina. TABLE OF CONTENTS Introduction……………………………………………………………………………………….4 Chapter I: The North Carolina Lichen Checklist…………………………………………………7 Chapter II: Herbarium Surveys and Initiation of a New Lichen Collection in the University of North Carolina Herbarium (NCU)………………………………………………………..9 Chapter III: Preparatory Field Surveys I: Battle Park and Rock Cliff Farm……………………13 Chapter IV: Preparatory Field Surveys II: State Park Forays…………………………………..17 Chapter V: Lichen Biota of Mason Farm Biological Reserve………………………………….19 Chapter VI: Additional Piedmont Lichen Surveys: Uwharrie Mountains…………………...…22 Chapter VII: A Revised Lichen Inventory of North Carolina Piedmont …..…………………...23 Acknowledgements……………………………………………………………………………..72 Appendices………………………………………………………………………………….…..73 Perlmutter – Piedmont Lichen Inventory Page 4 INTRODUCTION Lichens are composite organisms, consisting of a fungus (the mycobiont) and a photosynthesising alga and/or cyanobacterium (the photobiont), which together make a life form that is distinct from either partner in isolation (Brodo et al. -
<I>Heteroplacidium Compactum</I>
MYCOTAXON ISSN (print) 0093-4666 (online) 2154-8889 Mycotaxon, Ltd. ©2019 April–June 2019—Volume 134, pp. 369–376 https://doi.org/10.5248/134.369 Heteroplacidium compactum reported as a genus new to China Xiang-Min Cheng1,2, Da-Le Liu1,3, Xin-Li Wei*1,2, Jiang-Chun Wei1,2 1 State Key Laboratory of Mycology, Institute of Microbiology, Chinese Academy of Sciences, Beijing 100101, China 2 University of Chinese Academy of Sciences, Beijing 100049, China 3 College of Life Sciences, Southwest Forestry University, Kunming 650224, China * Correspondence to: [email protected] Abstract—Three specimens of Heteroplacidium compactum (Verrucariaceae), isolated from arid areas in Northwest China, were identified by morphological and phylogenetic comparisons with other species, including species of Endocarpon and Placidium (common verrucariaceous genera in the same area). This is the first report of Heteroplacidium from China. Key words—desert, ITS, lichen, morphology, taxonomy Introduction Breuss (1996) separated four genera—Anthracocarpon, Clavascidium, Heteroplacidium, and Involucropyrenium—from Catapyrenium Flot. s. lat. (Verrucariaceae) based on morphological characters. Neocatapyrenium H. Harada, Placidium A. Massal., and Scleropyrenium H. Harada are also morphologically related (Prieto & al. 2010b) but are independent monophyletic lineages within Verrucariaceae, according to phylogenetic analyses (Gueidan & al. 2007, 2009; Prieto & al. 2010b). Endocarpon Hedw. (Verrucariaceae) was relatively common during our field survey in the arid region of Northwest China (Yang & Wei 2008, Zhang & al. 2017a), but no species of Heteroplacidium Breuss was recorded. Heteroplacidium, which grows primarily on soil and rock in warm temperate 370 ... Cheng & al. Fig. 1. Heteroplacidium compactum collection sites in China. regions, is characterized by a crustose-areolate to squamulose thallus, a paraplectenchymatous or subparaplectenchymatous cortex, and clavate asci with biseriate ascospores (Prieto & al. -
Myconet Volume 14 Part One. Outine of Ascomycota – 2009 Part Two
(topsheet) Myconet Volume 14 Part One. Outine of Ascomycota – 2009 Part Two. Notes on ascomycete systematics. Nos. 4751 – 5113. Fieldiana, Botany H. Thorsten Lumbsch Dept. of Botany Field Museum 1400 S. Lake Shore Dr. Chicago, IL 60605 (312) 665-7881 fax: 312-665-7158 e-mail: [email protected] Sabine M. Huhndorf Dept. of Botany Field Museum 1400 S. Lake Shore Dr. Chicago, IL 60605 (312) 665-7855 fax: 312-665-7158 e-mail: [email protected] 1 (cover page) FIELDIANA Botany NEW SERIES NO 00 Myconet Volume 14 Part One. Outine of Ascomycota – 2009 Part Two. Notes on ascomycete systematics. Nos. 4751 – 5113 H. Thorsten Lumbsch Sabine M. Huhndorf [Date] Publication 0000 PUBLISHED BY THE FIELD MUSEUM OF NATURAL HISTORY 2 Table of Contents Abstract Part One. Outline of Ascomycota - 2009 Introduction Literature Cited Index to Ascomycota Subphylum Taphrinomycotina Class Neolectomycetes Class Pneumocystidomycetes Class Schizosaccharomycetes Class Taphrinomycetes Subphylum Saccharomycotina Class Saccharomycetes Subphylum Pezizomycotina Class Arthoniomycetes Class Dothideomycetes Subclass Dothideomycetidae Subclass Pleosporomycetidae Dothideomycetes incertae sedis: orders, families, genera Class Eurotiomycetes Subclass Chaetothyriomycetidae Subclass Eurotiomycetidae Subclass Mycocaliciomycetidae Class Geoglossomycetes Class Laboulbeniomycetes Class Lecanoromycetes Subclass Acarosporomycetidae Subclass Lecanoromycetidae Subclass Ostropomycetidae 3 Lecanoromycetes incertae sedis: orders, genera Class Leotiomycetes Leotiomycetes incertae sedis: families, genera Class Lichinomycetes Class Orbiliomycetes Class Pezizomycetes Class Sordariomycetes Subclass Hypocreomycetidae Subclass Sordariomycetidae Subclass Xylariomycetidae Sordariomycetes incertae sedis: orders, families, genera Pezizomycotina incertae sedis: orders, families Part Two. Notes on ascomycete systematics. Nos. 4751 – 5113 Introduction Literature Cited 4 Abstract Part One presents the current classification that includes all accepted genera and higher taxa above the generic level in the phylum Ascomycota. -
Abstracts for IAL 6- ABLS Joint Meeting (2008)
Abstracts for IAL 6- ABLS Joint Meeting (2008) AÐALSTEINSSON, KOLBEINN 1, HEIÐMARSSON, STARRI 2 and VILHELMSSON, ODDUR 1 1The University of Akureyri, Borgir Nordurslod, IS-600 Akureyri, Iceland, 2Icelandic Institute of Natural History, Akureyri Division, Borgir Nordurslod, IS-600 Akureyri, Iceland Isolation and characterization of non-phototrophic bacterial symbionts of Icelandic lichens Lichens are symbiotic organisms comprise an ascomycete mycobiont, an algal or cyanobacterial photobiont, and typically a host of other bacterial symbionts that in most cases have remained uncharacterized. In the current project, which focuses on the identification and preliminary characterization of these bacterial symbionts, the species composition of the resident associate microbiota of eleven species of lichen was investigated using both 16S rDNA sequencing of isolated bacteria growing in pure culture and Denaturing Gradient Gel Electrophoresis (DGGE) of the 16S-23S internal transcribed spacer (ITS) region amplified from DNA isolated directly from lichen samples. Gram-positive bacteria appear to be the most prevalent, especially actinomycetes, although bacilli were also observed. Gamma-proteobacteria and species from the Bacteroides/Chlorobi group were also observed. Among identified genera are Rhodococcus, Micrococcus, Microbacterium, Bacillus, Chryseobacterium, Pseudomonas, Sporosarcina, Agreia, Methylobacterium and Stenotrophomonas . Further characterization of selected strains indicated that most strains ar psychrophilic or borderline psychrophilic, -
Heidmarssonetal2017.Pdf
Phytotaxa 306 (1): 037–048 ISSN 1179-3155 (print edition) http://www.mapress.com/j/pt/ PHYTOTAXA Copyright © 2017 Magnolia Press Article ISSN 1179-3163 (online edition) https://doi.org/10.11646/phytotaxa.306.1.3 Multi-locus phylogeny supports the placement of Endocarpon pulvinatum within Staurothele s. str. (lichenised ascomycetes, Eurotiomycetes, Verrucariaceae) STARRI HEIÐMARSSON1, CÉCILE GUEIDAN2,3, JOLANTA MIADLIKOWSKA4 & FRANÇOIS LUTZONI4 1 Icelandic Institute of Natural History, Akureyri division, Borgir Nordurslod, 600 Akureyri, Iceland ([email protected]) 2 Australian National Herbarium, National Research Collections Australia, CSIRO-NCMI, PO Box 1700, Canberra, ACT 2601, Aus- tralia ([email protected]) 3 Department of Life Sciences, Natural History Museum, Cromwell road, SW7 5BD London, United Kingdom 4 Department of Biology, Duke University, Durham, NC 27708-0338, USA ([email protected], [email protected]) Abstract Within the lichen family Verrucariaceae, the genera Endocarpon, Willeya and Staurothele are characterised by muriform ascospores and the presence of algal cells in the hymenium. Endocarpon thalli are squamulose to subfruticose, whereas Willeya and Staurothele include only crustose species. Endocarpon pulvinatum, an arctic-alpine species newly reported for Iceland, is one of the few Endocarpon with a subfruticose thallus formed by long and narrow erected squamules. Molecular phylogenetic analyses of four loci (ITS, nrLSU, mtSSU, and mcm7) newly obtained from E. pulvinatum specimens from Iceland, Finland and North America does not confirm its current classification within the mostly squamulose genus Endocar- pon, but instead supports its placement within the crustose genus Staurothele. The new combination Staurothele pulvinata is therefore proposed here. It includes also E. tortuosum, which was confirmed as a synonym of E. -
New Records of Pyrenocarpous Lichenized Fungi from Bulgaria
ISSN (print) 0093-4666 © 2012. Mycotaxon, Ltd. ISSN (online) 2154-8889 MYCOTAXON http://dx.doi.org/10.5248/121.133 Volume 121, pp. 133–138 July–September 2012 New records of pyrenocarpous lichenized fungi from Bulgaria Veselin V. Shivarov* & Dimitar Y. Stoykov Institute of Biodiversity and Ecosystem Research, Bulgarian Academy of Sciences, 2 Gagarin St., 1113 Sofia, Bulgaria * Correspondence to: [email protected] Abstract — Five pyrenocarpous species of lichenized fungi, Acrocordia salweyi, Staurothele hymenogonia, Verrucaria praetermissa, V. viridula and Wahlenbergiella striatula, are reported for the first time from Bulgaria. Detailed descriptions, illustrations, and comments are provided. Key words — Pyrenulales, lichen taxonomy, Verrucariales Introduction Pyrenocarpous lichens comprise lichenized fungi with perithecioid ascomata. The taxa discussed here belong to the orders Pyrenulales and Verrucariales, characterized by having usually crustose, immersed or superficial thallus, variously colored and inhabit rocks, soil and bark. Several lichenologists have taxonomically studied Acrocordia species in Bulgaria (e.g. Kazandzhiev 1906; Szatala 1929; Zhelezova 1963; Pišút 1969, 2001), while many specialists (see Mayrhofer et al. 2005) have surveyed Verrucaria and Staurothele, with more recent records provided by Vondrák (2006) and Krzewicka et al. (2007). Recently five additional species were found for the first time in Bulgaria. Material & methods This study is based on specimens collected by the authors during 2006, 2007, and 2011 and now housed in the Mycological Collection at the Institute of Biodiversity and Ecosystem Research, Bulgarian Academy of Sciences, Sofia (SOMF). Determination of species follows Smith et al. (2009). Measurements of ascospores, conidia, and hymenial algal cells are given as follows: (min–) mean ± standard deviation (–max).