Molecular Phylogeny of Enchytraeidae (Annelida, Clitellata)
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Colecciones De Invertebrados Del Museo Nacional De Ciencias Naturales (Csic)
HISTORIA Y PRESENTE DE LAS COLECCIONES DE INVERTEBRADOS DEL MUSEO NACIONAL DE CIENCIAS NATURALES (CSIC) Miguel Villena Sánchez-Valero Conservador de las colecciones de Invertebrados 1 .- RESEÑA HISTÓRICA Para encontrar el origen de la Colección de Invertebrados de Museo Nacional de Ciencias Naturales de Madrid tenemos que remontarnos al último tercio del siglo XVIII, cuando, tras numerosas gestiones y diversos intentos, una Real Orden de Carlos III, promulgada el 17 de octubre de 1771, crea el Real Gabinete de Historia Natural y pone punto final a las enormes carencias que, en ese sentido, tenía España respecto a otros países europeos. En estos momentos iniciales, y hasta que se inaugure de forma definitiva el 4 de noviembre de 1776, las colecciones custodiadas en este establecimiento tendrán como base el excelente Gabinete de Historia Natural formado en París por el sabio ilustrado Pedro Franco Dávila, quien, gracias a sus desvelos en la formación del Gabinete y, sobre todo, gracias a los conocimientos en Historia Natural, adquiridos en una estancia de casi 26 años en París, en contacto con los científicos más reputados del momento, será nombrado Primer Director del establecimiento. Con este nombramiento Don Pedro recibió un triple encargo: que se coloquen en Madrid en debida forma las preciosidades actuales del Gabinete, y las demás con que el Rey providenciará enriquecerle, que se verifique la instrucción pública y, sobre todo, el encargo especial de que le tenga a su cuidado y procure difundir el gusto y nociones de tan importante materia.1 A partir de ese momento el interés principal del Gabinete recién creado y de sus dirigentes será el incremento de las colecciones con ese, cuando menos, triple objetivo que tiene que tener todo Museo2 que se precie de tal, es decir: • Conservar, catalogar, restaurar y exhibir de forma ordenada sus colecciones. -
Fauna Europaea: Annelida - Terrestrial Oligochaeta (Enchytraeidae and Megadrili), Aphanoneura and Polychaeta
Biodiversity Data Journal 3: e5737 doi: 10.3897/BDJ.3.e5737 Data Paper Fauna Europaea: Annelida - Terrestrial Oligochaeta (Enchytraeidae and Megadrili), Aphanoneura and Polychaeta Emilia Rota‡, Yde de Jong §,| ‡ University of Siena, Siena, Italy § University of Amsterdam - Faculty of Science, Amsterdam, Netherlands | Museum für Naturkunde, Berlin, Germany Corresponding author: Emilia Rota ([email protected]), Yde de Jong ([email protected]) Academic editor: Christos Arvanitidis Received: 26 Jul 2015 | Accepted: 07 Sep 2015 | Published: 11 Sep 2015 Citation: Rota E, de Jong Y (2015) Fauna Europaea: Annelida - Terrestrial Oligochaeta (Enchytraeidae and Megadrili), Aphanoneura and Polychaeta. Biodiversity Data Journal 3: e5737. doi: 10.3897/BDJ.3.e5737 Abstract Fauna Europaea provides a public web-service with an index of scientific names (including important synonyms) of all living European land and freshwater animals, their geographical distribution at country level (up to the Urals, excluding the Caucasus region), and some additional information. The Fauna Europaea project covers about 230,000 taxonomic names, including 130,000 accepted species and 14,000 accepted subspecies, which is much more than the originally projected number of 100,000 species. This represents a huge effort by more than 400 contributing specialists throughout Europe and is a unique (standard) reference suitable for many users in science, government, industry, nature conservation and education. This paper provides updated information on the taxonomic composition and distribution of the Annelida - terrestrial Oligochaeta (Megadrili and Enchytraeidae), Aphanoneura and Polychaeta, recorded in Europe. Data on 18 families, 11 autochthonous and 7 allochthonous, represented in our continent by a total of 800 species, are reviewed, beginning from their distinctness, phylogenetic status, diversity and global distribution, and following with major recent developments in taxonomic and faunistic research in Europe. -
1 Current and Selected Bibliographies on Benthic Biology – 2015 & 2016 –
1 ================================================================================== CURRENT AND SELECTED BIBLIOGRAPHIES ON BENTHIC BIOLOGY – 2015 & 2016 – [ published in May 2017 ] -------------------------------------------------------------------------------------------------------------------------------------------- FOREWORD. “Current and Selected Bibliographies on Benthic Biology” is published annually for the members of the Society for Freshwater Science (SFS) (formerly, the Midwest Benthological Society [MBS, 1953-1975] then the North American Benthological Society [NABS, 1975-2011]). This compilation summarizes titles of articles published in 2015. Additionally, pertinent titles of articles published prior to 2015 also have been included if they had not been cited in previous reviews (or to correct errors in previous annual bibliographies), and authors of several sections have also included citations for recent (2016 and 2017) publications. I extend my appreciation to 1) past and present members of the MBS, NABS and SFS Literature Review and Publications Committees and the Society presidents and treasurer Mike Swift for their support, 2) librarians Elizabeth Wohlgemuth (Illinois Natural History Survey) and Susan Braxton (Prairie Research Institute) for their assistance in accessing journals, other publications, bibliographic search engines and abstracting resources, and rare publications critical to the compilation and verification of citations included herein, and 3) Kristi L. Moss (Illinois Natural History Survey) for her assistance -
Thesis (9.945Mb)
ECOLOGICAL INTERACTIONS AND GEOLOGICAL IMPLICATIONS OF FORAMINIFERA AND ASSOCIATED MEIOFAUNA IN TEMPERATE SALT MARSHES OF EASTERN CANADA by Jennifer Lena Frail-Gauthier Submitted in partial fulfilment of the requirements for the degree of Doctor of Philosophy at Dalhousie University Halifax, Nova Scotia January, 2018 © Copyright by Jennifer Lena Frail-Gauthier, 2018 This is for you, Dave. Without you, I would have never discovered the treasures in the mud. ii TABLE OF CONTENTS List of Tables......................................................................................................................x List of Figures..................................................................................................................xii Abstract.............................................................................................................................xv List of Abbreviations and Symbols Used .....................................................................xvi Acknowledgements…………………………………..….………………………...…..xvii Chapter 1: Introduction…………………………………………………………………1 1.1 General Introduction .....................................................................................................1 1.2 Study Location and Evolution of Thesis........................................................................8 1.3 Chapter Outlines and Objectives.................................................................................11 1.3.1 Chapter 2: Development of a Salt Marsh Mesocosm to Study Spatio-Temporal Dynamics of Benthic -
Investigating the Clitellata (Annelida) of Icelandic Springs with Alternative Barcodes
Fauna norvegica 2019 Vol. 39: 119–132. Investigating the Clitellata (Annelida) of Icelandic springs with alternative barcodes Mårten J. Klinth1, Agnes-Katharina Kreiling2 and Christer Erséus1 Klinth MJ, Kreiling A-K and Erséus C. 2019. Investigating the Clitellata (Annelida) of Icelandic springs with alternative barcodes. Fauna norvegica 39: 119–132. DNA barcoding is an invaluable tool to identify clitellates, regardless of life stage or cryptic morphology. However, as COI (the standard barcode for animals) is relatively long (658 bp), sequencing it requires DNA of high quality. When DNA is fragmented due to degradation, alternative barcodes of shorter length present an option to obtain genetic material. We attempted to sequence 187 clitellates sampled from springs in Iceland. However, the material had been stored at room temperature for two years, and DNA of the worms had degraded, and only three COI sequences were produced (i.e., <2% success rate). Using two alternative barcodes of 16S (one ca. 320 bp, the other ca. 70 bp long) we increased the number of sequenced specimens to 51. Comparisons of the 16S sequences showed that even the short 70 bp fragment contained enough genetic variation to separate all clitellate species in the material. Combined with morphological examinations we recognized a total of 23 species, where at least 8 are new records for Iceland, some belonging to genera new for Iceland: Cernosvitoviella and Pristina. All the new taxa are included in an updated species list of Icelandic Clitellata. The material revealed some stygophilic species previously known to inhabit springs, but true stygobionts, which are restricted to groundwater habitats, were not found. -
Annelida - Terrestrial Oligochaeta (Enchytraeidae and Megadrili), Aphanoneura and Polychaeta
UvA-DARE (Digital Academic Repository) Fauna Europaea: Annelida - Terrestrial Oligochaeta (Enchytraeidae and Megadrili), Aphanoneura and Polychaeta Rota, E.; de Jong, Y. DOI 10.3897/BDJ.3.e5737 Publication date 2015 Document Version Final published version Published in Biodiversity Data Journal License CC BY Link to publication Citation for published version (APA): Rota, E., & de Jong, Y. (2015). Fauna Europaea: Annelida - Terrestrial Oligochaeta (Enchytraeidae and Megadrili), Aphanoneura and Polychaeta. Biodiversity Data Journal, 3, [e5737]. https://doi.org/10.3897/BDJ.3.e5737 General rights It is not permitted to download or to forward/distribute the text or part of it without the consent of the author(s) and/or copyright holder(s), other than for strictly personal, individual use, unless the work is under an open content license (like Creative Commons). Disclaimer/Complaints regulations If you believe that digital publication of certain material infringes any of your rights or (privacy) interests, please let the Library know, stating your reasons. In case of a legitimate complaint, the Library will make the material inaccessible and/or remove it from the website. Please Ask the Library: https://uba.uva.nl/en/contact, or a letter to: Library of the University of Amsterdam, Secretariat, Singel 425, 1012 WP Amsterdam, The Netherlands. You will be contacted as soon as possible. UvA-DARE is a service provided by the library of the University of Amsterdam (https://dare.uva.nl) Download date:01 Oct 2021 Biodiversity Data Journal 3: e5737 doi: -
The Current Status of Aquatic Oligochaetes in Ireland
Bulletin of the Irish Biogeographical Society Number 40 (2016) THE CURRENT STATUS OF AQUATIC OLIGOCHAETES IN IRELAND Pascal Sweeney Sweeney Consultancy, Rahan, Mallow, Co. Cork, Ireland. e-mail: <[email protected]> Abstract One hundred aquatic oligochaete species whose presence in Ireland has been confirmed are listed. An overview of the current knowledge regarding the occurrence and distribution of aquatic species of the Families Naididae (including species of the former Family Tubificidae), Pristinidae, Lumbriculidae, Lumbricidae and Phreodrilidae is given. Key words: Oligochaetes, aquatic, Ireland, occurrence, distribution. Introduction Some major changes in the higher classification of the Phylum Annelida in recent years do not yet appear to have resulted in a final stabilized classification system. As the taxonomic name Oligochaeta can now be considered synonymous with Clitellata referring to a rank above the family group (Erséus et al., 2008), the term ‘oligochaete’ is used here to refer to the species of oligochaetous annelids, excluding Polychaeta, leeches and leech-like worms. A change in classification at family level has resulted in the former Family Tubificidae being absorbed into the Family Naididae. As DNA data indicated that these two taxonomic groups should be treated as a single family, Erséus and Gustavsson (2002) proposed that the name Tubificidae be retained, because it was better known, even though Naididae is the older of the two names. However, the International Commission of Zoological Nomenclature (2007) ruled that there was not sufficient reason to justify reversal of procedure. Thus, the name Tubificidae is defunct. There is, however, a practical need to be able to use a term identifying the species of this former family, because of its use in biological water quality assessments. -
Soil Organisms
SOIL ORGANISMS Volume 82 (1) April 2010 ISSN: 1864-6417 Senckenberg Museum für Naturkunde Görlitz SOIL ORGANISMS Editor-in-Chief: Willi Xylander Executive-Editor: Herbert Boyle Editorial Committee: Axel Christian Karin Hohberg David Russell Hans-Jürgen Schulz Karin Voigtländer Editorial Board: Gerd Alberti Johannes Frisch Jörg Römbke Greifswald Berlin Flörsheim Birgit Balkenhol Jonathan Jeschke Jörg Rosenberg Görlitz München Essen Tom Bongers Rafael Jordana Liliane Rueß Wageningen Pamplona Berlin Badamdorj Bayartogtokh Christian Kampichler Bernhard Seifert Ulaan Baatar Tabasco Görlitz Alexander Bruckner Patrick Lavelle Volker Storch Wien Paris Heidelberg Erhard Christian Edward Mitchell Manfred Wanner Wien Lausanne Cottbus Wolfram Dunger Mikhail Potapov Gerd Weigmann Ebersbach Moskva Berlin Juliane Filser Heike Reise Jens Wöllecke Bremen Görlitz Cottbus Wilhelm Foissner Klaus Peter Zulka Salzburg Wien Cover: Enchytraeus albidus (by Rüdiger M. Schmelz) Cover design: Rüdiger M. Schmelz & Ekkehart Mättig SOIL ORGANISMS Volume 82 (1) April 2010 pp. 1–176 ISSN: 1864 - 6417 A guide to European terrestrial and freshwater species of Enchytraeidae (Oligochaeta) Rüdiger M. Schmelz & Rut Collado University of A Coruña, Faculty of Sciences, Department of Animal Biology, Plant Biology and Ecology; Alejandro da Sota, 1; 15008 A Coruña, Spain; e-mail [email protected] Abstract A guide to European terrestrial and freshwater enchytraeid species is presented, designed for the identification of living specimens. Altogether 206 species are included. Recent taxonomic advances regarding new species, revisions, and improved standards of description are integrated. Marine and exotic species are excluded. The illustrated keys are preceded by introductions into the taxonomic traits, the general anatomy of enchytraeids, and the technique of handling living worms during the identification process. -
Microdrile Oligochaeta in Bromeliad Pools of a Honduran Cloud Forest
Zootaxa 3947 (4): 508–526 ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ Article ZOOTAXA Copyright © 2015 Magnolia Press ISSN 1175-5334 (online edition) http://dx.doi.org/10.11646/zootaxa.3947.4.3 http://zoobank.org/urn:lsid:zoobank.org:pub:2EA27694-0D0E-40D5-A0F1-EC053A622594 Microdrile Oligochaeta in bromeliad pools of a Honduran cloud forest RÜDIGER M. SCHMELZ1,2, MERLIJN JOCQUE3, 4, 5 & RUT COLLADO2 1ECT Oekotoxikologie GmbH, Böttgerstr. 2–14, 65439 Flörsheim. E-mail: [email protected] 2Universidade da Coruña, Fac. Ciencias, Dep. de Bioloxía Animal, Biol. Vexetal y Ecoloxía, Alejandro da Sota, 10; E-15008 A Coru- ña, Spain 3Jessica Ware Lab, Rutgers, The State University of New Jersey, 195 University Avenue, Newark, NJ 07102, USA 4Koninklijk Belgisch Instituut voor Natuurwetenschappen (KBIN), Vautierstraat 29; 1000 Brussels, Belgium 5Operation Wallacea, Hope House, Old Bolingbroke, Lincolnshire, UK Abstract Phytotelmata, or plant-held water bodies, often house complex aquatic invertebrate communities. Microdrile oligochaetes (Clitellata, Annelida) are known to be part of that community, but specimens are rarely identified to species level. Here we report three species of Enchytraeidae and three species of Naididae from a collection sampled in phytotelms of bro- meliads in Cusuco National Park, Honduras. Two species of enchytraeids are new to science. Bryodrilus hondurensis sp. nov. is distinguished from other members of the genus by the high number of ventral chaetae, up to 11 per bundle. The genus is Holarctic and this is the southernmost record so far of a Bryodrilus species. Hemienchytraeus phytotelmatus sp. nov. is distinguished by a combination of characters, among which the huge spermathecae and seminal vesicles are most conspicuous. -
Annelids in Extreme Aquatic Environments: Diversity, Adaptations and Evolution
diversity Review Annelids in Extreme Aquatic Environments: Diversity, Adaptations and Evolution Christopher J. Glasby 1,2,*, Christer Erséus 3 and Patrick Martin 4 1 Natural Sciences, Museum & Art Gallery Northern Territory, PO Box 4646, Darwin, NT 0801, Australia 2 Research Institute for the Environment and Livelihoods, Charles Darwin University, Casuarina, NT 0810, Australia 3 Systematics and Biodiversity, Department of Biological and Environmental Sciences, University of Gothenburg, Box 463, SE-405 30 Göteborg, Sweden; [email protected] 4 Royal Belgian Institute of Natural Sciences, Taxonomy and Phylogeny, 29 rue Vautier, B-1000 Brussels, Belgium; [email protected] * Correspondence: [email protected] Abstract: We review the variety of morphological, physiological and behavioral modifications that annelids have acquired to cope with environments either unsuitable for, or on the limits of, survival for most animals. We focus on polychaetes (excluding sipunculans and echiurans) and clitellates (oligochaetes and leeches) and source information mostly from the primary literature. We identified many modifications common to both polychaetes and clitellates, and others that are specific to one or the other group. For example, certain land-adapted polychaetes show reduction in nuchal organs, epidermal ciliation and receptor cells, and other coastal polychaetes use adhesive glands and glue-reinforced tubes to maintain position in surf zones, while oligochaetes, with their simple body plans, appear to be ‘pre-adapted’ to life underground. Modifications common to both groups include the ability to construct protective cocoons, make cryoprotective substances such as Citation: Glasby, C.J.; Erséus, C.; antifreeze and heat shock proteins, develop gills, transform their bodies into a home for symbiotic Martin, P. -
The Groundwater Oligochaetes (Annelida, Clitellata) of Slovenia
Subterranean Biology 9: 85-102, 2011 Groundwater oligochaetes of Slovenia 85 doi: 10.3897/subtbiol.9.2512 The groundwater oligochaetes (Annelida, Clitellata) of Slovenia Narcisse GIANI (1), Beatrice SAMBUGAR (2,*), Enrique MARTÍNEZ-ANSEMIL (3), Patrick MARTIN (4), Rüdiger M. SCHMELZ (3) (1) Ecolab, UMR 5245 CNRS-UPS-INPT et LECP, Université Paul-Sabatier, 118 route de Narbonne, 31062 Toulouse Cedex 9, FRANCE (2) Museo Civico di Storia Naturale, Lungadige Porta Vittoria 9, I-37126 Verona, ITALY, e-mail: [email protected] (3) Departamento de Bioloxía Animal, Bioloxía Vexetal e Ecoloxía, Facultade de Ciencias, Universidade da Coruña, Alejandro da Sota 1, E-15008 A Coruña, SPAIN (4) Institut royal des Sciences naturelles de Belgique, Biologie des Eaux douces, rue Vautier 29, B-1000 Bruxelles, BELGIUM * corresponding author ABSTRACT Historical data on the biodiversity of oligochaetes inhabiting ground waters of Slovenia depicted a fauna of 25 species, 19 of which are stygobiotic. Over about the last 35 years, faunistic surveys carried out in Slovenian ground waters has enabled us to conduct extensive studies on the oligochaete fauna of this environment. Three primary sources of information have been integrated to sum- marize in this paper: a campaign in Slovenian caves conducted by Fabio Stoch, a large collection of groundwater fauna made avail- able to us by Boris Sket, and samples collected during the European project PASCALIS. The data derived from the examination of this large amount of material has enabled us to broaden our knowledge of the oligochaete diversity of Slovenia, increasing the number of species to one hundred, and has allowed us to summarize the biological diversity in Slovenian waters to be a substantial percentage of the known diversity present elsewhere in Europe. -
Enchytraeidae (Oligochaeta) in a Changing Climate
Enchytraeidae (Oligochaeta)inachangingclimate The climate is undergoing rapid changes with rising atmospheric CO2 concentration, increasing temperature and changes in the hydrological regimes resulting in more frequent Enchytraeidae (Oligochaeta) and intense drought periods. These three climate change factors will, separately and in combination, affect the biotic and abiotic components of the soil ecosystems. Enchytraeids are an important component in soil ecosystems and affect the decomposition processes in a changing climate and the nutrient mineralisation both directly and indirectly by their activity. Ecology and ecophysiology of enchytraeids exposed to climate changes The background for this thesis was to investigate the effect of climate change on fi eld populations of enchytraeids dominated by the species Cognettia sphagnetorum. Field populations of enchytraeids were exposed in a full factorial in-situ experiment to increased CO2, temperature and prolonged drought manipulation for three years. In the short term, enchytraeids appear to be unaffected by climate change when all factors are PhD Thesis, 2009 combined. The negative impact of drought was counteracted when CO2 was present, Kristine Maraldo as drought and CO2 in combination acted additively during summertime. However, in a long-term drought experiment in which C. sphagnetorum was exposed repeatedly to drought during a six year period, the species was, evidently, negatively affected. Even though the enchytraeids had been exposed for a long period, there was no sign of increased drought resistance. Climate change will, beyond doubt, have an impact on the enchytraeids, however, in a non predictable way. But factors such as extreme events, seasonal and interannually variations are all important factors as well, which can strongly infl uence the response of enchytraeids in a future climate.