Supplementary Information
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Investigation of Base-Free Copper-Catalysed Azide–Alkyne Click Cycloadditions (Cuaac) in Natural Deep Eutectic Solvents As Green and Catalytic Reaction Media
Investigation of Base-free Copper-Catalysed Azide–Alkyne Click Cycloadditions (CuAAc) in Natural Deep Eutectic Solvents as Green and Catalytic Reaction Media Salvatore V. Giofrè,1* Matteo Tiecco,2* Angelo Ferlazzo,3 Roberto Romeo,1 Gianluca Ciancaleoni,4 Raimondo Germani2 and Daniela Iannazzo3 1. Dipartimento di Scienze Chimiche, Biologiche, Farmaceutiche ed Ambientali, Università di Messina, Viale Annunziata, I-98168 Messina, Italy. 2. Dipartimento di Chimica, Biologia e Biotecnologie, Università di Perugia, via Elce di Sotto 8, I- 06123 Perugia, Italy. 3. Dipartimento di Ingegneria, Università of Messina, Contrada Di Dio, I-98166 Messina, Italy 4. Dipartimento di Chimica e Chimica Industriale (DCCI), Università di Pisa, Via Giuseppe Moruzzi, 13, I-56124 Pisa, Italy. * Corresponding authors Email addresses: [email protected] (Salvatore V. Giofrè); [email protected] (Matteo Tiecco). ABSTRACT The click cycloaddition reaction of azides and alkynes affording 1,2,3-triazoles is a transformation widely used to obtain relevant products in chemical biology, medicinal chemistry, materials science and other fields. In this work, a set of Natural Deep Eutectic Solvents (NADESs) as “active” reaction media has been investigated in the copper-catalysed azide–alkyne cycloaddition reactions (CuAAc). The use of these green liquids as green and catalytic solvents has shown to improve the reaction effectiveness, giving excellent yields. The NADESs proved to be “active” in this transformation for the absence of added bases in all the performed reactions and in several cases for their reducing capabilities. The results were rationalized by DFT calculations which demonstrated the involvement of H-bonds between DESs and alkynes as well as a stabilization of copper catalytic intermediates. -
Alkenes and Alkynes
02/21/2019 CHAPTER FOUR Alkenes and Alkynes H N O I Cl C O C O Cl F3C C Cl C Cl Efavirenz Haloprogin (antiviral, AIDS therapeutic) (antifungal, antiseptic) Chapter 4 Table of Content * Unsaturated Hydrocarbons * Introduction and hybridization * Alkenes and Alkynes * Benzene and Phenyl groups * Structure of Alkenes, cis‐trans Isomerism * Nomenclature of Alkenes and Alkynes * Configuration cis/trans, and cis/trans Isomerism * Configuration E/Z * Physical Properties of Hydrocarbons * Acid‐Base Reactions of Hydrocarbons * pka and Hybridizations 1 02/21/2019 Unsaturated Hydrocarbons • Unsaturated Hydrocarbon: A hydrocarbon that contains one or more carbon‐carbon double or triple bonds or benzene‐like rings. – Alkene: contains a carbon‐carbon double bond and has the general formula CnH2n. – Alkyne: contains a carbon‐carbon triple bond and has the general formula CnH2n‐2. Introduction Alkenes ● Hydrocarbons containing C=C ● Old name: olefins • Steroids • Hormones • Biochemical regulators 2 02/21/2019 • Alkynes – Hydrocarbons containing C≡C – Common name: acetylenes Unsaturated Hydrocarbons • Arene: benzene and its derivatives (Ch 9) 3 02/21/2019 Benzene and Phenyl Groups • We do not study benzene and its derivatives until Chapter 9. – However, we show structural formulas of compounds containing a phenyl group before that time. – The phenyl group is not reactive under any of the conditions we describe in chapters 5‐8. Structure of Alkenes • The two carbon atoms of a double bond and the four atoms bonded to them lie in a plane, with bond angles of approximately 120°. 4 02/21/2019 Structure of Alkenes • Figure 4.1 According to the orbital overlap model, a double bond consists of one bond formed by overlap of sp2 hybrid orbitals and one bond formed by overlap of parallel 2p orbitals. -
Introduction to Alkenes and Alkynes in an Alkane, All Covalent Bonds
Introduction to Alkenes and Alkynes In an alkane, all covalent bonds between carbon were σ (σ bonds are defined as bonds where the electron density is symmetric about the internuclear axis) In an alkene, however, only three σ bonds are formed from the alkene carbon -the carbon thus adopts an sp2 hybridization Ethene (common name ethylene) has a molecular formula of CH2CH2 Each carbon is sp2 hybridized with a σ bond to two hydrogens and the other carbon Hybridized orbital allows stronger bonds due to more overlap H H C C H H Structure of Ethylene In addition to the σ framework of ethylene, each carbon has an atomic p orbital not used in hybridization The two p orbitals (each with one electron) overlap to form a π bond (p bonds are not symmetric about the internuclear axis) π bonds are not as strong as σ bonds (in ethylene, the σ bond is ~90 Kcal/mol and the π bond is ~66 Kcal/mol) Thus while σ bonds are stable and very few reactions occur with C-C bonds, π bonds are much more reactive and many reactions occur with C=C π bonds Nomenclature of Alkenes August Wilhelm Hofmann’s attempt for systematic hydrocarbon nomenclature (1866) Attempted to use a systematic name by naming all possible structures with 4 carbons Quartane a alkane C4H10 Quartyl C4H9 Quartene e alkene C4H8 Quartenyl C4H7 Quartine i alkine → alkyne C4H6 Quartinyl C4H5 Quartone o C4H4 Quartonyl C4H3 Quartune u C4H2 Quartunyl C4H1 Wanted to use Quart from the Latin for 4 – this method was not embraced and BUT has remained Used English order of vowels, however, to name the groups -
Reactions of Aromatic Compounds Just Like an Alkene, Benzene Has Clouds of Electrons Above and Below Its Sigma Bond Framework
Reactions of Aromatic Compounds Just like an alkene, benzene has clouds of electrons above and below its sigma bond framework. Although the electrons are in a stable aromatic system, they are still available for reaction with strong electrophiles. This generates a carbocation which is resonance stabilized (but not aromatic). This cation is called a sigma complex because the electrophile is joined to the benzene ring through a new sigma bond. The sigma complex (also called an arenium ion) is not aromatic since it contains an sp3 carbon (which disrupts the required loop of p orbitals). Ch17 Reactions of Aromatic Compounds (landscape).docx Page1 The loss of aromaticity required to form the sigma complex explains the highly endothermic nature of the first step. (That is why we require strong electrophiles for reaction). The sigma complex wishes to regain its aromaticity, and it may do so by either a reversal of the first step (i.e. regenerate the starting material) or by loss of the proton on the sp3 carbon (leading to a substitution product). When a reaction proceeds this way, it is electrophilic aromatic substitution. There are a wide variety of electrophiles that can be introduced into a benzene ring in this way, and so electrophilic aromatic substitution is a very important method for the synthesis of substituted aromatic compounds. Ch17 Reactions of Aromatic Compounds (landscape).docx Page2 Bromination of Benzene Bromination follows the same general mechanism for the electrophilic aromatic substitution (EAS). Bromine itself is not electrophilic enough to react with benzene. But the addition of a strong Lewis acid (electron pair acceptor), such as FeBr3, catalyses the reaction, and leads to the substitution product. -
Chapter 7 - Alkenes and Alkynes I
Andrew Rosen Chapter 7 - Alkenes and Alkynes I 7.1 - Introduction - The simplest member of the alkenes has the common name of ethylene while the simplest member of the alkyne family has the common name of acetylene 7.2 - The (E)-(Z) System for Designating Alkene Diastereomers - To determine E or Z, look at the two groups attached to one carbon atom of the double bond and decide which has higher priority. Then, repeat this at the other carbon atom. This system is not used for cycloalkenes - If the two groups of higher priority are on the same side of the double bond, the alkene is designated Z. If the two groups of higher priority are on opposite sides of the double bond, the alkene is designated E - Hydrogenation is a syn/cis addition 7.3 - Relative Stabilities of Alkenes - The trans isomer is generally more stable than the cis isomer due to electron repulsions - The addition of hydrogen to an alkene, hydrogenation, is exothermic (heat of hydrogenation) - The greater number of attached alkyl groups, the greater the stability of an alkene 7.5 - Synthesis of Alkenes via Elimination Reactions, 7.6 - Dehydrohalogenation of Alkyl Halides How to Favor E2: - Reaction conditions that favor elimination by E1 should be avoided due to the highly competitive SN 1 mechanism - To favor E2, a secondary or tertiary alkyl halide should be used - If there is only a possibility for a primary alkyl halide, use a bulky base - Use a higher concentration of a strong and nonpolarizable base, like an alkoxide - EtONa=EtOH favors the more substituted double bond -
Reactions of Alkenes and Alkynes
05 Reactions of Alkenes and Alkynes Polyethylene is the most widely used plastic, making up items such as packing foam, plastic bottles, and plastic utensils (top: © Jon Larson/iStockphoto; middle: GNL Media/Digital Vision/Getty Images, Inc.; bottom: © Lakhesis/iStockphoto). Inset: A model of ethylene. KEY QUESTIONS 5.1 What Are the Characteristic Reactions of Alkenes? 5.8 How Can Alkynes Be Reduced to Alkenes and 5.2 What Is a Reaction Mechanism? Alkanes? 5.3 What Are the Mechanisms of Electrophilic Additions HOW TO to Alkenes? 5.1 How to Draw Mechanisms 5.4 What Are Carbocation Rearrangements? 5.5 What Is Hydroboration–Oxidation of an Alkene? CHEMICAL CONNECTIONS 5.6 How Can an Alkene Be Reduced to an Alkane? 5A Catalytic Cracking and the Importance of Alkenes 5.7 How Can an Acetylide Anion Be Used to Create a New Carbon–Carbon Bond? IN THIS CHAPTER, we begin our systematic study of organic reactions and their mecha- nisms. Reaction mechanisms are step-by-step descriptions of how reactions proceed and are one of the most important unifying concepts in organic chemistry. We use the reactions of alkenes as the vehicle to introduce this concept. 129 130 CHAPTER 5 Reactions of Alkenes and Alkynes 5.1 What Are the Characteristic Reactions of Alkenes? The most characteristic reaction of alkenes is addition to the carbon–carbon double bond in such a way that the pi bond is broken and, in its place, sigma bonds are formed to two new atoms or groups of atoms. Several examples of reactions at the carbon–carbon double bond are shown in Table 5.1, along with the descriptive name(s) associated with each. -
Alkynes: Molecular and Structural Formulas
Alkynes: Molecular and Structural Formulas The alkynes comprise a series of carbon- and hydrogen-based compounds that contain at least one triple bond. This group of compounds is a homologous series with the general molecular formula of C n H2 n--2 , where n equals any integer greater than one. The simplest alkyne, ethyne (also known as acetylene), has two carbon atoms and the molecular formula of C2H2. The structural formula for ethyne is In longer alkyne chains, the additional carbon atoms are attached to each other by single covalent bonds. Each carbon atom is also attached to sufficient hydrogen atoms to produce a total of four single covalent bonds about itself. In alkynes of four or more carbon atoms, the triple bond can be located in different positions along the chain, leading to the formation of structural isomers. For example, the alkyne of molecular formula C4H6 has two isomers, Although alkynes possess restricted rotation due to the triple bond, they do not have stereoisomers like the alkenes because the bonding in a carbon-carbon triple bond is sp hybridized. In sp hybridization, the maximum separation between the hybridized orbitals is 180°, so the molecule is linear. Thus, the substituents on triple-bonded carbons are positioned in a straight line, and stereoisomers are impossible Alkynes: Nomenclature Although some common alkyne names, such as acetylene, are still found in many textbooks, the International Union of Pure and Applied Chemistry (IUPAC) nomenclature is required for journal articles. The rules for alkynes in this system are identical with those for alkenes, except for the ending. -
Gas Phase Synthesis of Interstellar Cumulenes. Mass Spectrometric and Theoretical Studies."
rl ì 6. .B,1l thesis titled: "Gas Phase Synthesis of Interstellar Cumulenes. Mass Spectrometric and Theoretical studies." submitted for the Degree of Doctor of Philosophy (Ph.D') by Stephen J. Blanksby B.Sc.(Hons,) from the Department of ChemistrY The University of Adelaide Cì UCE April 1999 Preface Contents Title page (i) Contents (ii) Abstract (v) Statement of OriginalitY (vi) Acknowledgments (vii) List of Figures (ix) Phase" I Chapter 1. "The Generation and Characterisation of Ions in the Gas 1.I Abstract I 1.II Generating ions 2 t0 l.ru The Mass SPectrometer t2 1.IV Characterisation of Ions 1.V Fragmentation Behaviour 22 Chapter 2 "Theoretical Methods for the Determination of Structure and 26 Energetics" 26 2,7 Abstract 27 2.IT Molecular Orbital Theory JJ 2.TII Density Functional Theory 2.rv Calculation of Molecular Properties 34 2.V Unimolecular Reactions 35 Chapter 3 "Interstellar and Circumstellar Cumulenes. Mass Spectrometric and 38 Related Studies" 3.I Abstract 38 3.II Interstellar Cumulenes 39 3.III Generation of Interstellar Cumulenes by Mass Spectrometry 46 3.IV Summary 59 Preface Chapter 4 "Generation of Two Isomers of C5H from the Corresponding Anions' 61 ATheoreticallyMotivatedMassSpectrometricStudy.'. 6l 4.r Abstract 62 4.rl Introduction 66 4.III Results and Discussion 83 4.IV Conclusions 84 4.V Experimental Section 89 4.VI Appendices 92 Chapter 5 "Gas Phase Syntheses of Three Isomeric CSHZ Radical Anions and Their Elusive Neutrals. A Joint Experimental and Theoretical Study." 92 5.I Abstract 93 5.II Introduction 95 5.ru Results and Discussion t12 5.IV Conclusions 113 5.V Experimental Section ttl 5.VI Appendices t20 Chapter 6 "Gas Phase Syntheses of Three Isomeric ClHz Radical Anions and Their Elusive Neutrals. -
Formation of Highly Ordered Self-Assembled Monolayers of Alkynes on Au(111) Substrate
Formation of Highly Ordered Self-Assembled Monolayers of Alkynes on Au(111) Substrate The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters Citation Zaba, Tomasz, Agnieszka Noworolska, Carleen Morris Bowers, Benjamin Breiten, George M. Whitesides, and Piotr Cyganik. 2014. Formation of Highly Ordered Self-Assembled Monolayers of Alkynes on Au(111) Substrate. Journal of the American Chemical Society 136, no. 34: 11918–11921. doi:10.1021/ja506647p. Published Version doi:10.1021/ja506647p Citable link http://nrs.harvard.edu/urn-3:HUL.InstRepos:33490483 Terms of Use This article was downloaded from Harvard University’s DASH repository, and is made available under the terms and conditions applicable to Open Access Policy Articles, as set forth at http:// nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of- use#OAP Page 1 of 5 Journal of the American Chemical Society 1 2 3 4 5 6 7 Formation of Highly Ordered Self-Assembled Monolayers of 8 9 Alkynes on Au(111) Substrate 10 ‡ ‡ § § 11 Tomasz Zaba, Agnieszka Noworolska, Carleen Bowers, Benjamin Breiten, 12 § ‡ 13 George M. Whitesides and Piotr Cyganik* 14 ‡Smoluchowski Institute of Physics, Jagiellonian University, ul. Reymonta 4, 30-059 Krakow, Poland 15 § 16 Department of Chemistry and Chemical Biology, Harvard University, 12 Oxford Street, Cambridge, MA 02138, USA 17 18 19 Supporting Information Placeholder 20 21 ABSTRACT: Self-assembled monolayers (SAMs), prepared SAMs are sensitive to oxidation at an undefined point in their formation; that is, oxidation occurs either during or after SAM 22 by reaction of terminal n-DON\QHV +&Ł& &+ 2)nCH 3, n = 5, 7, 9, o formation (for example, by UHDFWLRQ RI WKH $X&Ł&5 ERQG ZLWK 23 and 11) with Au(111) at 60 C were characterized using scanning tunneling microscopy (STM), infra-red reflection absorption O2). -
Bioresorbable Stereochemically Defined Polymers for Tissue Engineering and Wireless Bio-Integrated Electronic Device Applications
© 2021 Yen-Hao Hsu ALL RIGHTS RESERVED BIORESORBABLE STEREOCHEMICALLY DEFINED POLYMERS FOR TISSUE ENGINEERING AND WIRELESS BIO-INTEGRATED ELECTRONIC DEVICE APPLICATIONS A Dissertation Presented to The Graduate Faculty of The University of Akron In Partial Fulfillment of the Requirements for the Degree Doctor of Philosophy Yen-Hao Hsu March, 2021 BIORESORBABLE STEREOCHEMICALLY DEFINED POLYMERS FOR TISSUE ENGINEERING AND WIRELESS BIO-INTEGRATED ELECTRONIC DEVICE APPLICATIONS Yen-Hao Hsu Dissertation Approved: Accepted: _______________________________ ______________________________ Advisor Interim Director of SPSPE Dr. Matthew L. Becker Dr. Ali Dhinojwala _______________________________ ______________________________ Committee Member Interim Dean of the College Dr. Yu Zhu Dr. Craig Menzemer _______________________________ ______________________________ Committee Member Interim Director, Graduate School Dr. Chrys Wesdemiotis Dr. Marnie Saunders _______________________________ ______________________________ Committee Member Date Dr. Xiong Gong _______________________________ Committee Member Dr. Kevin A. Cavicchi iii ABSTRACT In most synthetic bioresorbable polymers, changing the physical properties such as elasticity and toughness by monomers results in a change to the crystallinity of the material, which manifests through alteration of its mechanical performance. “Thiol-yne” click chemistry has been discovered as an efficient methodology for step-growth polymerization between thiols and activated alkynes. Variation of the solvent polarity -
Gfsorganics & Fragrances
Chemicals for Flavors GFSOrganics & Fragrances GFS offers a broad range of specialty organic chemicals Specialized chemistries we as building blocks and intermediates for the manufacture of offer include: flavors and fragrances. • Alkynes Over 5,500 materials, including 1,400 chemicals from natural sources, are used for flavor • Alkynols enhancements and aroma profiles. These aroma chemicals are integral components of • Olefins the continued growth within consumer products and packaged foods. The diversity of products can be attributed to the broad spectrum of organic compounds derived from • Unsaturated Acids esters, aldehydes, lactones, alcohols and several other functional groups. • Unsaturated Esters • DIPPN and other Products GFS Chemicals manufactures a wide range of organic intermediates that have been utilized in a multitude of personal care applications. For example, we support Why GFS? several market leading companies in the manufacture and supply of alkyne based aroma chemicals. • Specialized Chemistries • Tailored Specifications As such, we understand the demanding nature of this fast changing market and are fully • From Grams to Metric Tons equipped to overcome process challenges and manufacture the novel chemical products • Responsive Technical Staff that you need, when you need them. We offer flexible custom manufacturing services to produce high purity products with the assurance of quality and full confidentiality. • Uncompromised Product Quality Our state-of-the-art manufacturing facility, located in Columbus, OH is ISO 9001:2008 certified. As a U.S. based manufacturer we have a proven record of helping you take products from development to commercialization. Our technical sales experts are readily accessible to discuss your project needs and unique product specifications. -
Synthesis, Characterization, and Application of 1,4-Dienylindiums Toward Skipped Dienes
molecules Communication Regio- and Stereoselective Allylindation of Alkynes Using InBr3 and Allylic Silanes: Synthesis, Characterization, and Application of 1,4-Dienylindiums toward Skipped Dienes Yoshihiro Nishimoto 1,*, Junyi Yi 2, Tatsuaki Takata 2, Akio Baba 2 and Makoto Yasuda 2,* 1 Frontier Research Base for Global Young Researchers Center for Open Innovation Research and Education (COiRE), Graduate School of Engineering, Osaka University; Osaka 565-0871, Japan 2 Department of Applied Chemistry, Graduate School of Engineering, Osaka University; Osaka 565-0871, Japan; [email protected] (J.Y.); [email protected] (T.T.); [email protected] (A.B.) * Correspondence: [email protected] (Y.N.); [email protected] (M.Y.); Tel.: +81-6-6879-7386 (Y.N.); +81-6-6879-7384 (M.Y.) Received: 7 July 2018; Accepted: 27 July 2018; Published: 27 July 2018 Abstract: Regioselective anti-allylindation of alkynes was achieved using InBr3 and allylic silanes. Various types of alkynes and allylic silanes were applicable to the present allylindation. This sequential process used the generated 1,4-dienylindiums to establish novel synthetic methods for skipped dienes. The 1,4-dienylindiums were characterized by spectral analysis and treated with I2 to stereoselectively give 1-iodo-1,4-dienes. The Pd-catalyzed cross coupling of 1,4-dienylindium with iodobenzene successfully proceeded in a one-pot manner to afford the corresponding 1-aryl-1,4-diene. Keywords: indium; allylmetalation; alkyne; allylic silane 1. Introduction Carbometalation is an important synthetic method in organic synthesis because organometallic compounds are produced with an expansion of the carbon framework [1–7].