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Morvan Et Al. Timetree of Aselloidea Reveals Species Diversification

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Morvan et al. Timetree of Aselloidea reveals species diversification dynamics in groundwater Appendix 2 Appendix 2 COI dataset. CO : iso country codes, LA : latitude in decimal degrees, LO : longitude in decimal degrees, HA : haplotype number, TH : evolutionary unit number as delimited with the threshold method, GM : evolutionary unit number as delimited with the GMYC method, AN : accession number. SPECIES INDIVIDUAL LOCALITY CO LA LO HA TH GM AN Asellus (Asellus) aquaticus (Linnaeus, 1758) Alborg DK 57.04722 9.91944 H_478 T_176 G_035 DQ144816 ∗ Feres GR 40.85083 26.17750 H_479 T_174 G_143 DQ144885 ∗ Karlobag HR 44.52667 15.18139 H_484 T_175 G_146 DQ144788 ∗ Kharkiv UA 50.03917 36.16167 H_483 T_172 G_142 DQ144824 ∗ Lezignan FR 43.26694 2.71944 H_477 T_176 G_035 AY531784 ∗ Olsztyn PL 53.81139 20.43667 H_480 T_176 G_035 DQ144821 ∗ Santorin island GR 36.45278 25.50556 H_482 T_174 G_144 DQ144828 y Sheffield GB 53.49444 -1.24778 H_476 T_176 G_035 DQ144886 ∗ Trieste IT 45.67258 13.82487 H_481 T_173 G_145 AY531762 ∗ Wageningen NL 51.96778 5.66278 H_485 T_176 G_035 DQ144844 y Asellus (Asellus) hilgendorfii Bovallius, 1886 Toyama JP 36.69583 137.21361 H_486 T_177 G_140 AY531829 y Betamorpha fusiformis (Barnard, 1920) Weddell Sea -75.04944 -47.26278 H_496 T_020 G_121 EF682291 z Bragasellus comasi Henry & Magniez, 1976 COBALLE1_200906_1 Caso ES 43.18619 -5.38696 H_364 T_155 G_039 JQ921527 COBALLE2_200906_1 Caso ES 43.18470 -5.38804 H_365 T_155 G_039 JQ921528 COBALLE2_200906_2 Caso ES 43.18470 -5.38804 H_366 T_158 G_155 JQ921529 FRIES_200906_1ID Cangas de Onis ES 43.42265 -5.08772 H_369 T_157 G_040 JQ921532 FRIES_200906_2 Cangas de Onis ES 43.42265 -5.08772 H_370 T_157 G_040 JQ921533 FRIES_200906_3 Cangas de Onis ES 43.42265 -5.08772 H_369 T_157 G_040 JQ921534 LAFOZ_200906_1 Caso ES 43.14939 -5.27504 H_371 T_155 G_039 JQ921535 PENDONES_200906_1ID Caso ES 43.13238 -5.24747 H_367 T_154 G_153 JQ921530 PENDONES_200906_2ID Caso ES 43.13238 -5.24747 H_368 T_155 G_039 JQ921531 Bragasellus cortesi Afonso, 1989 POUCA_201010_1ID Vila Pouca de Aguiar PT 41.49062 -7.64903 H_372 T_169 G_045 JQ921536 POUCA_201010_2 Vila Pouca de Aguiar PT 41.49062 -7.64903 H_372 T_169 G_045 JQ921537 POUCA_201010_3 Vila Pouca de Aguiar PT 41.49062 -7.64903 H_373 T_169 G_045 JQ921538 Bragasellus escolai Henry & Magniez, 1978 YUSOREIN_200906_1ID Portilla de la Reina ES 43.02150 -4.86578 H_374 T_160 G_041 JQ921539 YUSOREIN_200906_4ID Portilla de la Reina ES 43.02150 -4.86578 H_375 T_160 G_041 JQ921540 Bragasellus frontellum (Braga, 1964) ABOIM_201010_1ID Aboim das Chocas PT 41.91711 -8.44715 H_376 T_170 G_156 JQ921541 ABOIM_201010_2 Aboim das Chocas PT 41.91711 -8.44715 H_376 T_170 G_156 JQ921542 ABOIM_201010_2ex Aboim das Chocas PT 41.91711 -8.44715 H_376 T_170 G_156 JQ921543 Bragasellus lagari Henry & Magniez, 1973 ALBENTOS_200910_1ID Albentosa ES 40.12242 -0.76379 H_377 T_026 G_137 JQ921544 ARGONGE_200910_1ex Teresa de Cofrentes ES 39.10269 -1.04100 H_382 T_025 G_029 JQ921525 ARGONGE_200910_2ex Teresa de Cofrentes ES 39.10269 -1.04100 H_383 T_025 G_029 JQ921526 CABRIEL_200910_1ID Cofrentes ES 39.24954 -1.09382 H_378 T_023 G_030 JQ921552 CABRIEL_200910_2 Cofrentes ES 39.24954 -1.09382 H_379 T_023 G_030 JQ921553 CASCAN2_200910_1ID Cascante del Rio ES 40.20431 -1.12963 H_381 T_022 G_031 JQ921545 CASCAN2_200910_2 Cascante del Rio ES 40.20431 -1.12963 H_381 T_022 G_031 JQ921546 CAUTAB_200910_2ID Jarafuel ES 39.14380 -1.04686 H_381 T_023 G_030 JQ921549 CAUTAB_200910_3ID Jarafuel ES 39.14380 -1.04686 H_380 T_023 G_030 JQ921550 CAUTAB_200910_5 Jarafuel ES 39.14380 -1.04686 H_380 T_023 G_030 JQ921551 MEREMIL_200910_1ID Gestalgar ES 39.59690 -0.84903 H_385 T_021 G_136 JQ921547 MEREMIL_200910_2 Gestalgar ES 39.59690 -0.84903 H_385 T_021 G_136 JQ921548 SUMIDORS_200910_1ID Vallada ES 38.88048 -0.68871 H_384 T_027 G_134 JQ921555 SUMIDORS_200910_2 Vallada ES 38.88048 -0.68871 H_362 T_027 G_134 JQ921556 TRILLO_200910_2 Trillo ES 40.69067 -2.58333 H_363 T_024 G_135 JQ921554 Bragasellus lagarioides Henry & Magniez, 1996 CREUS_200906_1 Santes Creus ES 41.34883 1.36169 H_386 T_162 G_037 JQ921557 MARFIL_200906_1 Valdenoceda ES 42.86092 -3.59298 H_387 T_156 G_043 JQ921558 MARFIL_200906_2 Valdenoceda ES 42.86092 -3.59298 H_388 T_156 G_043 JQ921559 MARFIL_200906_4ID Valdenoceda ES 42.86092 -3.59298 H_388 T_156 G_043 JQ921560 PERPETUA_200906_1ID Santa Perpetua de Gaya ES 41.46251 1.39087 H_389 T_162 G_037 JQ921561 1 Morvan et al. Timetree of Aselloidea reveals species diversification dynamics in groundwater Appendix 2 PERPETUA_200906_2 Santa Perpetua de Gaya ES 41.46251 1.39087 H_389 T_162 G_037 JQ921562 RUDRON_201010_1ID Basconcillos del Tozo ES 42.70230 -3.91793 H_390 T_156 G_043 JQ921563 RUDRON_201010_2 Basconcillos del Tozo ES 42.70230 -3.91793 H_391 T_156 G_043 JQ921564 Bragasellus molinai Henry & Magniez, 1988 VALPORQU_201010_1ID Vegacervera ES 42.90665 -5.56286 H_392 T_163 G_038 JQ921565 VALPORQU_201010_2 Vegacervera ES 42.90665 -5.56286 H_393 T_163 G_038 JQ921566 VALPORQU_201010_3 Vegacervera ES 42.90665 -5.56286 H_394 T_163 G_038 JQ921567 Bragasellus peltatus (Braga, 1944) MEZIO_201010_1ID Lousada PT 41.28193 -8.30839 H_395 T_171 G_046 JQ921568 MEZIO_201010_2 Lousada PT 41.28193 -8.30839 H_396 T_171 G_046 JQ921569 SOUTO_201010_1ID Croca PT 41.22073 -8.24852 H_395 T_171 G_046 JQ921570 Bragasellus stocki Henry & Magniez, 1988 CONCHA_201010_2cyto Cudillero ES 43.55978 -6.19003 H_361 T_161 G_042 JQ921571 CONCHA_201010_3 Cudillero ES 43.55978 -6.19003 H_399 T_161 G_042 JQ921524 Bragasellus rouchi Henry & Magniez, 1988 DEVAPANE_200906_1ID Panes ES 43.31075 -4.60950 H_397 T_159 G_154 JQ921573 Caecidotea kenki (Bowman, 1967) PIMMIT1_200902_1 Fairfax US 38.92917 -77.11806 H_400 T_033 G_036 JQ921574 PIMMIT1_200902_2ID Fairfax US 38.92917 -77.11806 H_401 T_033 G_036 JQ921575 Chthonasellus bodoni Argano & Messana, 1991 CHIUPESI_200908_1ID Chiusa di Pesio IT 44.21600 7.65983 H_402 T_074 G_091 JQ921576 CHIUPESI_200908_2ID Chiusa di Pesio IT 44.21600 7.65983 H_403 T_074 G_091 JQ921577 CHIUPESI_200908_3 Chiusa di Pesio IT 44.21600 7.65983 H_403 T_074 G_091 JQ921578 Gallasellus heilyi (Legrand, 1956) FONTROI_200812_1ID La Jarrie-Audouin FR 46.03528 -0.46417 H_409 T_179 G_034 JQ921587 FONTROI_200812_2 La Jarrie-Audouin FR 46.03528 -0.46417 H_409 T_179 G_034 JQ921588 FONTVEUV_200812_2ID Saint-Pierre-de-l’Ile FR 46.02028 -0.44917 H_411 T_179 G_034 JQ921590 FONTVEUV_200812_3 Saint-Pierre-de-l’Ile FR 46.02028 -0.44917 H_412 T_179 G_034 JQ921591 MERIGNY_200908_1ex Merigny FR 46.64083 0.93472 H_408 T_178 G_141 JQ921585 MERIGNY_200912_1ID Merigny FR 46.64083 0.93472 H_408 T_178 G_141 JQ921586 PUITD_200912_1ID Le Thou FR 46.08472 -0.92528 H_406 T_180 G_032 JQ921582 PUITD_200912_2 Le Thou FR 46.08472 -0.92528 H_407 T_180 G_032 JQ921583 PUITD_200912_3 Le Thou FR 46.08472 -0.92528 H_407 T_180 G_032 JQ921584 SOMPT_200812_1ID Sompt FR 46.15611 -0.10194 H_410 T_180 G_032 JQ921589 Lirceolus bisetus (Steeves, 1968) San Saba US 31.01778 -98.50514 H_487 T_034 G_150 AY566533 x Lirceolus cocytus Lewis, 2001 Acuna MX 29.40254 -101.33401 H_489 T_029 G_138 AY566528 x Jeff Davis US 30.75278 -103.59917 H_488 T_028 G_139 AY566544 x Lirceolus hardeni Lewis & Bowman, 1996 Kendall US 29.90917 -98.61806 H_493 T_036 G_152 AY566537 x Travis US 30.26750 -97.76639 H_492 T_035 G_151 AY566551 x Lirceolus pilus (Steeves, 1968) Bandera US 29.77278 -99.56722 H_491 T_031 G_148 AY566539 x Medina US 29.52389 -99.40500 H_490 T_032 G_147 AY566554 x Magniezia gardei Magniez, 1978 ERRACHID_201004_1ID Errachidia MA 31.95300 -4.45240 H_422 T_014 G_132 JQ921605 ERRACHID_201004_2 Errachidia MA 31.95300 -4.45240 H_422 T_014 G_132 JQ921606 Mexistenasellus coahuila Cole & Minckley, 1972 San Antonio US 29.42337 -98.48781 H_495 T_018 G_133 AY566478 x Proasellus aff. escolai Henry & Magniez, 1982 JESUS_200910_1ID Iznatoraf ES 38.13233 -2.96932 H_003 T_109 G_204 JQ921020 JESUS_200910_2 Iznatoraf ES 38.13233 -2.96932 H_003 T_109 G_204 JQ921021 JESUS_200910_3 Iznatoraf ES 38.13233 -2.96932 H_003 T_109 G_204 JQ921022 Proasellus aff. lagari Henry & Magniez, 1982 PERAL_200910_1ID Sorbas ES 37.07920 -2.10080 H_004 T_117 G_201 JQ921023 PERAL_200910_2 Sorbas ES 37.07920 -2.10080 H_004 T_117 G_201 JQ921024 PERAL_200910_3 Sorbas ES 37.07920 -2.10080 H_004 T_117 G_201 JQ921025 Proasellus albigensis (Magniez, 1965) FOUSTER_200804_1 Cambon FR 43.91028 2.22278 H_006 T_126 G_009 JQ921028 LAUZIE_200804_2ID Cambon FR 43.90972 2.23389 H_007 T_126 G_009 JQ921029 RAYSSAGU_197700_2ID Cambon FR 43.91028 2.22278 H_008 T_126 G_009 JQ921030 Proasellus aquaecalidae (Racovitza, 1922) GEAUXCH_200811_1m Eaux-Bonnes FR 42.93417 -0.44056 H_009 T_140 G_009 JQ921031 OUEILNEE_200811_1ID Rebenacq FR 43.15000 -0.40472 H_010 T_141 G_114 JQ921032 2 Morvan et al. Timetree of Aselloidea reveals species diversification dynamics in groundwater Appendix 2 OUEILNEE_200811_2 Rebenacq FR 43.15000 -0.40472 H_011 T_141 G_114 JQ921033 OUEILNEE_200811_3 Rebenacq FR 43.15000 -0.40472 H_010 T_141 G_114 JQ921034 PEAUXCH_200811_1 Eaux-Bonnes FR 42.93861 -0.44028 H_009 T_140 G_191 JQ921035 PEAUXCH_200811_2 Eaux-Bonnes FR 42.93861 -0.44028 H_009 T_140 G_191 JQ921036 Proasellus aragonensis Henry & Magniez, 1992 BURGUI_200906_1ID Burgui ES 42.70362 -1.01646 H_012 T_147 G_113 JQ921037 BURGUI_200906_2 Burgui ES 42.70362 -1.01646 H_013 T_146 G_190 JQ921038 BURGUI_200906_3 Burgui ES 42.70362 -1.01646 H_014 T_147 G_113 JQ921039 Proasellus arnautovici (Remy, 1932) Ohrid MK 41.03730 20.71899 H_018 T_149 G_094 DQ305140 { Ohrid MK 41.03730 20.71899 H_474 T_148 G_093 DQ305138 { LIVADIST_200909_1ID Livadi MK 41.00746 20.75565
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  • Key Factors for Biodiversity of Urban Water Systems

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    Key factors for biodiversity of urban water systems Kim Vermonden Key factors for biodiversity of urban water systems Vermonden, K., 2010. Key factors for biodiversity of urban water systems. PhD-thesis, Radboud University, Nijmegen. © 2010 K. Vermonden, all rights reserved. ISBN: 978-94-91066-01-6 Layout: A. M. Antheunisse Printed by: Ipskamp Drukkers BV, Enschede This project was financially supported by the Interreg IIIb North-West Europe programme Urban water and the municipalities of Nijmegen and Arnhem. Key factors for biodiversity of urban water systems Een wetenschappelijke proeve op het gebied van de Natuurwetenschappen, Wiskunde en Informatica PROEFSCHRIFT ter verkrijging van de graad van doctor aan de Radboud Universiteit Nijmegen op gezag van de rector magnificus prof. mr. S.C.J.J. Kortmann, volgens besluit van het college van decanen in het openbaar te verdedigen op donderdag 25 november 2010 om 10.30 uur precies door Kim Vermonden geboren op 20 november 1980 te Breda Promotores: Prof. dr. ir. A.J. Hendriks Prof. dr. J.G.M. Roelofs Copromotores: Dr. R.S.E.W. Leuven Dr. G. van der Velde Manuscriptcommissie: Prof. dr. H. Siepel (voorzitter) Prof. dr. A.J.M. Smits Dr. J. Borum (Kopenhagen Universiteit, Denemarken) Contents Chapter 1 Introduction 9 Chapter 2 Does upward seepage of river water and storm water runoff 19 determine water quality of urban drainage systems in lowland areas? A case study for the Rhine-Meuse delta (Hydrological Processes 23: 3110-3120) Chapter 3 Species pool versus site limitations of macrophytes in urban 39 waters (Aquatic Sciences 72: 379-389) Chapter 4 Urban drainage systems: An undervalued habitat for aquatic 59 macroinvertebrates (Biological Conservation 142: 1105-1115) Chapter 5 Key factors for chironomid diversity in urban waters 81 (submitted) Chapter 6 Environmental factors determining invasibility of urban 103 waters for exotic macroinvertebrates (submitted to Diversity and Distributions) Chapter 7 Synthesis 121 Summary 133 Samenvatting 137 Dankwoord 141 Curriculum vitae 145 Urban water system Nijmegen.
  • Melanization in Response to Wounding Is Ancestral in Arthropods and Conserved in Albino Cave Species

    Melanization in Response to Wounding Is Ancestral in Arthropods and Conserved in Albino Cave Species

    Melanization in response to wounding is ancestral in arthropods and conserved in albino cave species The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters Citation Bilandžija, Helena, Mara Laslo, Megan L. Porter, and Daniel W. Fong. 2017. “Melanization in response to wounding is ancestral in arthropods and conserved in albino cave species.” Scientific Reports 7 (1): 17148. doi:10.1038/s41598-017-17471-2. http:// dx.doi.org/10.1038/s41598-017-17471-2. Published Version doi:10.1038/s41598-017-17471-2 Citable link http://nrs.harvard.edu/urn-3:HUL.InstRepos:34652060 Terms of Use This article was downloaded from Harvard University’s DASH repository, and is made available under the terms and conditions applicable to Other Posted Material, as set forth at http:// nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of- use#LAA www.nature.com/scientificreports OPEN Melanization in response to wounding is ancestral in arthropods and conserved in albino cave Received: 15 August 2017 Accepted: 27 November 2017 species Published: xx xx xxxx Helena Bilandžija1, Mara Laslo2, Megan L. Porter3 & Daniel W. Fong4 Many species adapted to aphotic subterranean habitats have lost all body pigmentation. Yet, melanization is an important component of wound healing in arthropods. We amputated appendages in a variety of cave-adapted and surface-dwelling arthropods. A dark clot formed at the site of injury in most species tested, including even albino cave-adapted species. The dark coloration of the clots was due to melanin deposition. The speed of wound melanization was uncorrelated with a diference in metabolic rate between surface and cave populations of an amphipod.
  • (Crustacea; Isopoda) in Freshwater

    (Crustacea; Isopoda) in Freshwater

    Hydrobiologia (2008) 595:231–240 DOI 10.1007/s10750-007-9019-z FRESHWATER ANIMAL DIVERSITY ASSESSMENT Global diversity of Isopod crustaceans (Crustacea; Isopoda) in freshwater George D. F. Wilson Ó Springer Science+Business Media B.V. 2007 Abstract The isopod crustaceans are diverse both small number of freshwater species. A diverse group morphologically and in described species numbers. of more derived isopods, the ‘Flabellifera’ sensu lato Nearly 950 described species (*9% of all isopods) has regionally important species richness, such as in live in continental waters, and possibly 1,400 species the Amazon River. These taxa are transitional remain undescribed. The high frequency of cryptic between marine and freshwater realms and represent species suggests that these figures are underestimates. multiple colonisations of continental habitats. Most Several major freshwater taxa have ancient biogeo- species of freshwater isopods species and many graphic patterns dating from the division of the genera are narrow range endemics. This endemism continents into Laurasia (Asellidae, Stenasellidae) ensures that human demand for fresh water will place and Gondwana (Phreatoicidea, Protojaniridae and these isopods at an increasing risk of extinction, as Heterias). The suborder Asellota has the most has already happened in a few documented cases. described freshwater species, mostly in the families Asellidae and Stenasellidae. The suborder Phreato- Keywords Isopoda Á Crustacea Á Gondwana Á icidea has the largest number of endemic genera. Laurasia Á Diversity feeding Á Reproduction Á Other primary freshwater taxa have small numbers of Habits Á Fresh water Á Classification described species, although more species are being discovered, especially in the southern hemisphere. The Oniscidea, although primarily terrestrial, has a Introduction The Isopoda are a diverse group of crustaceans, with more than 10,300 species found in all realms from the Guest editors: E.
  • Stygobites) in England and Wales

    Stygobites) in England and Wales

    DOCTORAL THESIS An investigation into the distribution of obligate groundwater animals (stygobites) in England and Wales Weitowitz, Damiano Award date: 2017 General rights Copyright and moral rights for the publications made accessible in the public portal are retained by the authors and/or other copyright owners and it is a condition of accessing publications that users recognise and abide by the legal requirements associated with these rights. • Users may download and print one copy of any publication from the public portal for the purpose of private study or research. • You may not further distribute the material or use it for any profit-making activity or commercial gain • You may freely distribute the URL identifying the publication in the public portal ? Take down policy If you believe that this document breaches copyright please contact us providing details, and we will remove access to the work immediately and investigate your claim. Download date: 09. Oct. 2021 An investigation into the distribution of obligate groundwater animals (stygobites) in England and Wales N. kochianus captured from the Chalk in England, UK. Damiano C Weitowitz BSc, MSc A thesis submitted in partial fulfilment of the requirements for the degree of PhD Department of Life Sciences University of Roehampton 2016 II Abstract Aquifers and their biota (stygobites) are some of the least well known ecosystems. Previous research indicates geology is an important control of stygobites and the primary thesis aim was therefore to examine how geology shapes the distributions of stygobites across different spatial scales, considering high lithological detail. The food web functionality of groundwater ecosystems is also rarely explored and the secondary thesis aim was therefore to examine the trophic effects of stygobites in experimental groundwater microcosms.
  • Final Report

    Final Report

    Final Report Identifying, Verifying, and Establishing Options for Best Management Practices for NOBOB Vessels Principal Investigators David F. Reid, NOAA Great Lakes Environmental Research Laboratory Thomas H. Johengen, University of Michigan Hugh MacIsaac, University of Windsor Fred Dobbs, Old Dominion University Martina Doblin, Old Dominion University Lisa Drake. Old Dominion University Greg Ruiz, Smithsonian Environmental Research Lab Phil Jenkins, Philip T. Jenkins & Associates Ltd. June 2007 (Revised) Acknowledgements Financial support for this collaborative research program was provided by the Great Lakes Protection Fund (Chicago, IL) and enhanced by funding support from the U.S. Coast Guard and the National Oceanic and Atmospheric Administration (NOAA). Furthermore, without the support and cooperation of numerous ship owners, operators, agents, agent organizations, vessel officers and crew, this research could not have been successfully completed. In particular, Fednav International Ltd, Polish Steamship Company, Jo Tankers AS of Kokstad, Norway, and Operators of Marinus Green generously consented to having their ships to participate in the study. To that end we thank the Captain and crew of the following participating ships for their excellent cooperation and assistance: MV/ Lady Hamilton; MV/ Irma; MV/ Federal Ems; and MV/ Marinus Green. GLERL Contribution #1436. Contributing Authors by Section Task 1 Objective 1.1: T. Johengen1, D. Reid2, and P. Jenkins3 Objective 1.2: D. Reid2, T. Johengen1, and P. Jenkins3 Objective 1.3: P. Jenkins3, T. Johengen1, and D. Reid2 Task 2 Objective 2.1: F. Dobbs4, Y.Tang4, F. Thomson4, S. Heinemann4, and S. Rondon4 Objective 2.2: Y. Hong1 Objective 2.3: H. MacIsaac5, C. van Overdijk5, and D.