Susceptibility of Evoked Vocal Responses to Noise Exposure in a Frog of the Temperate Austral Forest
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Aspects of the Ecology and Conservation of Frogs in Urban Habitats of South Africa
Frogs about town: Aspects of the ecology and conservation of frogs in urban habitats of South Africa DJD Kruger 20428405 Thesis submitted for the degree Philosophiae Doctor in Zoology at the Potchefstroom Campus of the North-West University Supervisor: Prof LH du Preez Co-supervisor: Prof C Weldon September 2014 i In loving memory of my grandmother, Kitty Lombaard (1934/07/09 – 2012/05/18), who has made an invaluable difference in all aspects of my life. ii Acknowledgements A project with a time scale and magnitude this large leaves one indebted by numerous people that contributed to the end result of this study. I would like to thank the following people for their invaluable contributions over the past three years, in no particular order: To my supervisor, Prof. Louis du Preez I am indebted, not only for the help, guidance and support he has provided throughout this study, but also for his mentorship and example he set in all aspects of life. I also appreciate the help of my co-supervisor, Prof. Ché Weldon, for the numerous contributions, constructive comments and hours spent on proofreading. I owe thanks to all contributors for proofreading and language editing and thereby correcting my “boerseun” English grammar but also providing me with professional guidance. Prof. Louis du Preez, Prof. Ché Weldon, Dr. Andrew Hamer, Dr. Kirsten Parris, Prof. John Malone and Dr. Jeanne Tarrant are all dearly thanked for invaluable comments on earlier drafts of parts/the entirety of this thesis. For statistical contributions I am especially also grateful to Dr. Andrew Hamer for help with Bayesian analysis and to the North-West Statistical Services consultant, Dr. -
Characterization of an Alsodes Pehuenche Breeding Site in the Andes of Central Chile
Herpetozoa 33: 21–26 (2020) DOI 10.3897/herpetozoa.33.e49268 Characterization of an Alsodes pehuenche breeding site in the Andes of central Chile Alejandro Piñeiro1, Pablo Fibla2, Carlos López3, Nelson Velásquez3, Luis Pastenes1 1 Laboratorio de Genética y Adaptación a Ambientes Extremos, Departamento de Biología y Química, Facultad de Ciencias Básicas, Universidad Católica del Maule. Av. San Miguel #3605, Talca, Chile 2 Laboratorio de Genética y Evolución, Departamento de Ciencias Ecológicas, Facultad de Ciencias, Universidad de Chile. Las Palmeras #3425, Santiago, Chile 3 Laboratorio de Comunicación Animal, Departamento de Biología y Química, Facultad de Ciencias Básicas, Universidad Católica del Maule, Av. San Miguel #3605, Talca, Chile http://zoobank.org/E7A8C1A6-31EF-4D99-9923-FAD60AE1B777 Corresponding author: Luis Pastenes ([email protected]) Academic editor: Günter Gollmann ♦ Received 10 December 2019 ♦ Accepted 21 March 2020 ♦ Published 7 April 2020 Abstract Alsodes pehuenche, an endemic anuran that inhabits the Andes of Argentina and Chile, is considered “Critically Endangered” due to its restricted geographical distribution and multiple potential threats that affect it. This study is about the natural history of A. pe- huenche and the physicochemical characteristics of a breeding site located in the Maule mountain range of central Chile. Moreover, the finding of its clutches in Chilean territory is reported here for the first time. Finally, a description of the number and morphology of these eggs is provided. Key Words Alsodidae, Andean, Anura, endemism, highland wetland, threatened species The Andean border crossing “Paso Internacional Pehu- and long roots arranged in the form of cushions, hence the enche” (38°59'S, 70°23'W, 2553 m a.s.l.) is a bioceanic name “cushion plants” (Badano et al. -
Mannophryne Olmonae) Catherine G
The College of Wooster Libraries Open Works Senior Independent Study Theses 2014 A Not-So-Silent Spring: The mpI acts of Traffic Noise on Call Features of The loB ody Bay Poison Frog (Mannophryne olmonae) Catherine G. Clemmens The College of Wooster, [email protected] Follow this and additional works at: https://openworks.wooster.edu/independentstudy Part of the Other Environmental Sciences Commons Recommended Citation Clemmens, Catherine G., "A Not-So-Silent Spring: The mpI acts of Traffico N ise on Call Features of The loodyB Bay Poison Frog (Mannophryne olmonae)" (2014). Senior Independent Study Theses. Paper 5783. https://openworks.wooster.edu/independentstudy/5783 This Senior Independent Study Thesis Exemplar is brought to you by Open Works, a service of The oC llege of Wooster Libraries. It has been accepted for inclusion in Senior Independent Study Theses by an authorized administrator of Open Works. For more information, please contact [email protected]. © Copyright 2014 Catherine G. Clemmens A NOT-SO-SILENT SPRING: THE IMPACTS OF TRAFFIC NOISE ON CALL FEATURES OF THE BLOODY BAY POISON FROG (MANNOPHRYNE OLMONAE) DEPARTMENT OF BIOLOGY INDEPENDENT STUDY THESIS Catherine Grace Clemmens Adviser: Richard Lehtinen Submitted in Partial Fulfillment of the Requirement for Independent Study Thesis in Biology at the COLLEGE OF WOOSTER 2014 TABLE OF CONTENTS I. ABSTRACT II. INTRODUCTION…………………………………………...............…...........1 a. Behavioral Effects of Anthropogenic Noise……………………….........2 b. Effects of Anthropogenic Noise on Frog Vocalization………………....6 c. Why Should We Care? The Importance of Calling for Frogs..................8 d. Color as a Mode of Communication……………………………….…..11 e. Biology of the Bloody Bay Poison Frog (Mannophryne olmonae)…...13 III. -
Evaluating Methods for Phylogenomic Analyses, and a New Phylogeny for a Major Frog Clade
Molecular Phylogenetics and Evolution 119 (2018) 128–143 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Evaluating methods for phylogenomic analyses, and a new phylogeny for a MARK major frog clade (Hyloidea) based on 2214 loci ⁎ Jeffrey W. Streichera,b, , Elizabeth C. Millera, Pablo C. Guerreroc,d, Claudio Corread, Juan C. Ortizd, Andrew J. Crawforde, Marcio R. Pief, John J. Wiensa a Department of Ecology and Evolutionary Biology, University of Arizona, Tucson, AZ 85721, USA b Department of Life Sciences, The Natural History Museum, London SW7 5BD, UK c Institute of Ecology and Biodiversity, Faculty of Sciences, University of Chile, 780-0024 Santiago, Chile d Facultad de Ciencias Naturales & Oceanográficas, Universidad de Concepción, Concepción, Chile e Department of Biological Sciences, Universidad de los Andes, A.A. 4976 Bogotá, Colombia f Departamento de Zoologia, Universidade Federal do Paraná, Curitiba, Paraná, Brazil ARTICLE INFO ABSTRACT Keywords: Phylogenomic approaches offer a wealth of data, but a bewildering diversity of methodological choices. These Amphibia choices can strongly affect the resulting topologies. Here, we explore two controversial approaches (binning Anura genes into “supergenes” and inclusion of only rapidly evolving sites), using new data from hyloid frogs. Hyloid Biogeography frogs encompass ∼53% of frog species, including true toads (Bufonidae), glassfrogs (Centrolenidae), poison Naive binning frogs (Dendrobatidae), and treefrogs (Hylidae). Many hyloid families are well-established, but relationships Phylogenomics among these families have remained difficult to resolve. We generated a dataset of ultraconserved elements Statistical binning (UCEs) for 50 ingroup species, including 18 of 19 hyloid families and up to 2214 loci spanning > 800,000 aligned base pairs. -
Articles-38747 Archivo 01.Pdf
MINISTERIO DE EDUCACIÓN PUBLICA Ministro de Educación Pública Carolina Schmidt Zaldívar Subsecretario de Educación Fernando Rojas Ochagavía Dirección de Bibliotecas, Magdalena Krebs Kaulen Archivo y Museos Diagramación Herman Núñez Impreso por BOLETÍN DEL MUSEO NACIONAL DE HISTORIA NATURAL CHILE Director Claudio Gómez Papic Editor Herman Núñez Comité Editor Pedro Báez R. Mario Elgueta D. Gloria Rojas V. David Rubilar R. Rubén Stehberg L. (c) Dirección de Bibliotecas, Archivos y Museos Inscripción N° XXXXXXX Edición de 100 ejemplares Museo Nacional de Historia Natural Casilla 787 Santiago de Chile www.mnhn.cl Se ofrece y acepta canje Exchange with similar publications is desired Échange souhaité Wir bitten um Austach mit aehnlichen Fachzeitschriften Si desidera il cambio con publicazioni congeneri Deseja-se permuta con as publicações congéneres Este volumen se encuentra disponible en soporte electrónico como disco compacto y en línea en Contribución del Museo Nacional de Historia Natural al Programa del Conocimiento y Preservación de la Diversidad Biológica Las opiniones vertidas en cada uno de los artículos publicados son de excluisiva responsabilidad del autor respectivo BOLETÍN DEL MUSEO NACIONAL DE HISTORIA NATURAL CHILE 2013 62 SUMARIO CLAUDIO GÓMEZ P. Editorial ............................................................................................................................................................................6 ANDRÉS O. TAUCARE-RÍOS y WALTER SIELFELD Arañas (Arachnida: Araneae) del Extremo Norte de Chile ...............................................................................................7 -
Tracing the Evolutionary History of Two Endemic Ground Frogs of Temperate Forest of Southern Chile, Through Molecular and Cytogenetic Approaches
TRACING THE EVOLUTIONARY HISTORY OF TWO ENDEMIC GROUND FROGS OF TEMPERATE FOREST OF SOUTHERN CHILE, THROUGH MOLECULAR AND CYTOGENETIC APPROACHES TESIS DE MAGISTER CAMILA ANDREA QUERCIA RATY VALDIVIA – CHILE TRACING THE EVOLUTIONARY HISTORY OF TWO ENDEMIC GROUND FROGS OF TEMPERATE FOREST OF SOUTHERN CHILE, TROUGHT MOLECULAR AND CYTOGENETIC APPROACHES Tesis presentada a la Facultad de Ciencias de la Universidad Austral de Chile en cumplimiento parcial de los requisitos para optar al grado de Magíster en Ciencias mención Genética por CAMILA A. QUERCIA RATY Valdivia Chile 2019 Universidad Austral de Chile Facultad de Ciencias INFORME DE APROBACIÓN TESIS DE MAGISTER La Comisión Evaluadora de Tesis comunica a la Directora de la Escuela de Graduados de la Facultad de Ciencias que la Tesis de Magíster presentada por la Candidata CAMILA ANDREA QUERCIA RATY ha sido aprobada en el exámen de defensa de Tesis rendido el día ___de _____ de 20__ como requisito para optar al grado de Magíster en Ciencias menCión Genética y, para que así conste para todos los efectos firman: Profesor Patrocinante Dr. José J. Nuñez Instituto de Ciencias Marinas y Limnológicas __________________________ Profesor Copatrocinante Dr. Elkin Y. Suárez-Villota Instituto de Ciencias Marinas y Limnológicas __________________________ Comisión Evaluadora Dra. Leyla Cárdenas Instituto de Ciencias Ambientales y Evolutivas __________________________ Dr. Guillermo D´Elía Instituto de CienCias Ambientales y Evolutivas __________________________ DEDICATORIA A mis padres y todos quienes se Convirtieron en mi familia De aquellos glaciares y hojarascas de quienes tu no podrás saber. AGRADECIMIENTOS Siento especial gratitud hacia quienes fueron mis mayores guías en este proceso, Dr. José Nuñez y Dr. -
Eupsophus Emiliopugini Formas 1989 Rana De Hojarasca De Párpados Verdes Familia: Cycloramphidae
FICHA DE ESPECIE CLASIFICADA Nombre Científico Nombre Común Eupsophus emiliopugini Formas 1989 Rana de hojarasca de párpados verdes Familia: Cycloramphidae Sinonimia No presenta sinonimia (Frost 2009). Antecedentes Generales Eupsophus emiliopugini es una rana de tamaño mediano que alcanza los 56 mm de longitud hocico-cloaca (Núñez 2003). Se caracteriza por presentar una banda distintiva de color verde oliváceo entre los ojos, la cual se encuentra ausente en E. roseus, E. calcaratus, E. vittatus, E. migueli, E. insularis y E. vertebralis. Presenta un pliegue supra timpánico bien desarrollado que se extiende desde el borde del ojo a la parte posterior del tímpano, cubriendo la parte superior del anillo timpánico pero sin alcanzar la inserción del brazo. Ojos color negro con reticulaciones doradas y pupila horizontal. Dedos terminados en puntas finas y redondeadas, sin membrana interdigital. Tubérculo metatarsal interno ovoide y prominente, el externo rudimentario. Pliegue tarsal ausente. Piel dorsal y ventral suave, sin granulaciones. Coloración dorsal café grisáceo con una línea vertebral delgada y bien definida color amarillo limón. Algunos especímenes presentan reticulaciones amarilla brillantes en las extremidades. El vientre es blanquecino y en época nupcial, la región gular de los machos se torna anaranjada brillante (Formas 1989). E. emiliopugini se clasifica en el grupo vertebralis, el cual presenta una fuerte sustentación filogenética, de acuerdo al trabajo de Núñez (2003). Su cariotipo es de 28 cromosomas, todos bibraquiados (Núñez 2003). La época de reproducción ocurre durante los meses de Septiembre a Diciembre. Los sitios de reproducción corresponden a una serie de pequeñas cavidades llenas de agua, al borde de arroyos cercanos al bosque. -
Research.Pdf
AGGRESSIVE CALLING IN TREEFROGS A Dissertation presented to the Faculty of the Graduate School At the University of Missouri In Partial Fulfillment Of the Requirements for the Degree Doctor of Philosophy By MICHAEL STEWART REICHERT Dr. H. Carl Gerhardt, Dissertation Supervisor DECEMBER 2011 The undersigned, appointed by the dean of the Graduate School, have examined the dissertation entitled AGGRESSIVE CALLING IN TREEFROGS Presented by Michael Stewart Reichert A candidate for the degree of Doctor of Philosophy And hereby certify that, in their opinion, it is worthy of acceptance. H. Carl Gerhardt, Ph.D. Reginald Cocroft, Ph.D. Raymond Semlitsch, Ph.D. David Geary, Ph.D. ACKNOWLEDGEMENTS This work belongs to many people. I would first like to thank my family for always supporting my interests and doing everything they could to make sure I succeeded. Thanks to my Mom, Dad, Elizabeth, Rebecca, Will, Grandma and Grandpa Gerstle and Grandma and Grandpa Reichert. The highest acknowledgement must go to my wife, Flavia Barbosa, whom I met very early on in graduate school. She has been with me throughout the entire process and my work would be far inferior without her. We went through some very challenging times early in graduate school, and without each other’s support, I’m not sure we would have made it to where we are today. Flavia inspired me early on with her passion for science, and has had as much of an impact on my work as anyone. She’s been there with me in the field, running experiments, reading every draft I ever wrote and helping me keep a positive mental attitude. -
Bioclimatic and Anthropogenic Variables Shape the Occurrence of Batrachochytrium Dendrobatidis Over a Large Latitudinal Gradient
www.nature.com/scientificreports OPEN Bioclimatic and anthropogenic variables shape the occurrence of Batrachochytrium dendrobatidis over a large latitudinal gradient Mario Alvarado‑Rybak1,2,3, Manuel Lepe‑Lopez1, Alexandra Peñafel‑Ricaurte1,2, Andrés Valenzuela‑Sánchez1,4,5, Catalina Valdivia1, Fernando O. Mardones6, Leonardo D. Bacigalupe7, Robert Puschendorf8, Andrew A. Cunningham2 & Claudio Azat1* Amphibian chytridiomycosis, caused by the fungus Batrachochytrium dendrobatidis (Bd), has caused the greatest known loss of biodiversity due to an infectious disease. We used Bd infection data from quantitative real‑time PCR (qPCR) assays of amphibian skin swabs collected across Chile during 2008–2018 to model Bd occurrence with the aim to determine bioclimatic and anthropogenic variables associated with Bd infection. Also, we used Bd presence/absence records to identify geographical Bd high‑risk areas and compare Bd prevalence and infection loads between amphibian families, ecoregions, and host ecology. Data comprised 4155 Bd‑specifc qPCR assays from 162 locations across a latitudinal gradient of 3700 km (18º to 51ºS). Results showed a signifcant clustering of Bd associated with urban centres and anthropogenically highly disturbed ecosystems in central‑south Chile. Both Bd prevalence and Bd infection loads were higher in aquatic than terrestrial amphibian species. Our model indicated positive associations of Bd prevalence with altitude, temperature, precipitation and human‑modifed landscapes. Also, we found that macroscale drivers, such as land use change and climate, shape the occurrence of Bd at the landscape level. Our study provides with new evidence that can improve the efectiveness of strategies to mitigate biodiversity loss due to amphibian chytridiomycosis. In recent years, amphibians have declined dramatically in many regions of the world1 with approximely 50% of amphibian species under risk of global extinction 2,3. -
Phylogenetic Relationships of a Patagonian Frog Radiation, the Alsodes + Eupsophus Clade (Anura: Alsodidae), with Comments on the Supposed Paraphyly of Eupsophus
Cladistics Cladistics (2012) 1–19 10.1111/j.1096-0031.2012.00417.x Phylogenetic relationships of a Patagonian frog radiation, the Alsodes + Eupsophus clade (Anura: Alsodidae), with comments on the supposed paraphyly of Eupsophus Boris L. Blottoa, Jose´J. Nun˜ ezb,Ne´stor G. Bassoc, Carmen A. U´bedad, Ward C. Wheelere and Julia´n Faivovicha,f,* aDivisio´n Herpetologı´a, Museo Argentino de Ciencias Naturales ‘‘Bernardino Rivadavia’’-CONICET, A´ngel Gallardo 470, C1405DJR, Ciudad Auto´noma de Buenos Aires, Argentina; bInstituto de Zoologı´a, Universidad Austral de Chile, Casilla 567, Valdivia, Chile; cCentro Nacional Patago´nico (CENPAT), Blvd. Brown 2915, U-9120-ACF Puerto Madryn, Argentina; dCentro Regional Universitario Bariloche, Universidad Nacional del Comahue, Quintral 1250, R-8400-FRF San Carlos de Bariloche, Rı´o Negro, Argentina; eDivision of Invertebrate Zoology, American Museum of Natural History, Central Park West at 79th St, New York, NY 10024, USA; fDepartamento de Biodiversidad y Biologı´a Experimental—Facultad de Ciencias Exactas y Naturales, Universidad de Buenos Aires, Argentina Accepted 23 May 2012 Abstract The frog clade composed of the alsodid genera Alsodes + Eupsophus is the most species-rich of the Patagonian endemic frog clades, including nearly 31 of the slightly more than 50 species of that region. The biology of this group of frogs is poorly known, its taxonomy quite complex (particularly Alsodes), and its diversity in chromosome number striking when compared with other frogs (collectively, there are species having 2n = 22, 2n = 26, 2n = 28, 2n =30or2n = 34). We present a phylogenetic analysis of this Patagonian frog clade based on mitochondrial and nuclear gene sequences. -
Ecotoxicology and Genotoxicology Non-Traditional Terrestrial Models
Ecotoxicology and Genotoxicology Non-traditional Terrestrial Models Published on 12 June 2017 http://pubs.rsc.org | doi:10.1039/9781788010573-FP001 View Online Issues in Toxicology Series Editors: Diana Anderson, University of Bradford, UK Michael D. Waters, Michael Waters Consulting, USA Timothy C. Marrs, Edentox Associates, UK Editorial Advisor: Alok Dhawan, CSIR-Indian Institute of Toxicology Research, Lucknow, India Titles in the Series: 1: Hair in Toxicology: An Important Bio-Monitor 2: Male-mediated Developmental Toxicity 3: Cytochrome P450: Role in the Metabolism and Toxicity of Drugs and other Xenobiotics 4: Bile Acids: Toxicology and Bioactivity 5: The Comet Assay in Toxicology 6: Silver in Healthcare 7: In Silico Toxicology: Principles and Applications 8: Environmental Cardiology 9: Biomarkers and Human Biomonitoring, Volume 1: Ongoing Programs and Exposures 10: Biomarkers and Human Biomonitoring, Volume 2: Selected Biomarkers of Current Interest 11: Hormone-Disruptive Chemical Contaminants in Food 12: Mammalian Toxicology of Insecticides 13: The Cellular Response to the Genotoxic Insult: The Question of Published on 12 June 2017 http://pubs.rsc.org | doi:10.1039/9781788010573-FP001 Threshold for Genotoxic Carcinogens 14: Toxicological Effects of Veterinary Medicinal Products in Humans: Volume 1 15: Toxicological Effects of Veterinary Medicinal Products in Humans: Volume 2 16: Aging and Vulnerability to Environmental Chemicals: Age-related Disorders and their Origins in Environmental Exposures 17: Chemical Toxicity Prediction: -
Literature Cited to Accompany Animal Communication, 2E
Principles of Animal Communication, Second Edition Jack W. Bradbury and Sandra L. Vehrencamp Chapter 1: Signals and Communication Literature Cited 1 Alcock, J. 2009. Animal Behavior: An Evolutionary Approach. 9th Edition. Sunderland, MA: Sinauer Associates. 2 Amy, M., M. Monbureau, C. Durand, D. Gomez, M. Thery, and G. Leboucher. 2008. Female canary mate preferences: differential use of information from two types of male-male interaction. Animal Behaviour 76: 971–982. 3 Aragon, P. 2009. Conspecific male chemical cues influence courtship behaviour in the male newt Lissotriton boscai. Behaviour 146: 1137–1151. 4 Avital, E. and E. Jablonka. 2000. Animal Traditions: Behavioural Inheritance in Evolution. Cambridge, UK: Cambridge University Press. 5 Backwell, P., M. Jennions, N. Passmore, and J. Christy. 1998. Synchronized courtship in fiddler crabs. Nature 391: 31–32. 6 Barton, N. H., D. E. G. Briggs, J. A. Eisen, D. B. Goldstein, and N. H. Patel. 2007. Evolution. Cold Spring Harbor, NY: Cold Spring Harbor Laboratory Press. 7 Bradbury, J. W. and S. L. Vehrencamp. 2000. Economic models of animal communication. Animal Behaviour 59: 259–268. 8 Buck, J. and E. Buck. 1978. Towards a functional interpretation of synchronous flashing by fireflies. American Naturalist 112: 471–492. 9 Covas, R., P. K. McGregor, and C. Doutrelant. 2007. Cooperation and communication networks. Behavioural Processes 76: 149–151. 10 Dall, S. R. X., L. A. Giraldeau, O. Olsson, J. M. McNamara, and D. W. Stephens. 2005. Information and its use by animals in evolutionary ecology. Trends in Ecology and Evolution 20: 187–193. 11 Doutrelant, C., P. K. McGregor, and R.