Ocean Acidification Does Not Limit Squid Metabolism Via Blood Oxygen Supply Matthew A
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Annual Report 2014
AR 14 ARC CENTRE OF EXCELLENCE FOR CORAL REEF STUDIES ANNUAL REPORT 2014 Contents 2 Vision 2 Aims 2 Overview 4 Director’s Report 6 2014 Highlights 7 Global Research Reach 8 Chief Investigator Profile: Associate Professor Sophie Dove 10 Graduate Profile: Georgina Gurney 11 Research Program 1: People and Ecosystems 17 Research Program 2: Ecosystem Dynamics: Past Present and Future 23 Research Program 3: Responding to a Changing World 29 Article: Single Species May be Key to Reef Health 30 Knowledge Transfer 32 Graduate and Early Career Training At the ARC Centre of Excellence for Coral Reef Studies we acknowledge the Australian Aboriginal and Torres Strait Islander peoples of this nation. We acknowledge the Traditional Owners of the lands where we conduct our business. We pay our respects to ancestors and Elders, past, present and future. Cover photo by Raphael Williams Photo by Stefano Montanari 41 National and International Linkages 44 Article: Effects of Changing Tastes in China Extend Abroad 46 Media and Public Outreach 49 National Research Priority Case Study: The Great Barrier Reef 51 Article: Plan to Protect Great Barrier Reef Under Fire 52 Publications 62 Recognition of Excellence by Centre Members 64 Governance 66 Leader Profile: Professor Katrina Brown 67 Membership 69 Financial Statement 70 Financial Outlook 71 Key Performance Indicators 75 Acknowledgements AR 14 Photo by Steve Lindfield Vision Aims Overview 2 CORAL REEF STUDIES Leading the global research effort in the provision of scientific knowledge necessary for sustaining the ecosystem goods and services of the world’s coral reefs during a period of unprecedented environmental change. -
Cephalopoda: Idiosepiidae) in Indonesian Waters
ZOBODAT - www.zobodat.at Zoologisch-Botanische Datenbank/Zoological-Botanical Database Digitale Literatur/Digital Literature Zeitschrift/Journal: Annalen des Naturhistorischen Museums in Wien Jahr/Year: 2007 Band/Volume: 108B Autor(en)/Author(s): Klepal Waltraud, von Byern J. Artikel/Article: Occurrence of Idiosepius pygmaeus (Cephalopoda, Idiosepiidae) in Indonesian waters. 137-144 ©Naturhistorisches Museum Wien, download unter www.biologiezentrum.at Ann. Naturhist. Mus. Wien 108 B 137- 144 Wien, Mai 2007 Occurrence of Idiosepius pygmaeus (Cephalopoda: Idiosepiidae) in Indonesian waters J. von Byern* & W. Klepal* Abstract Individuals of/, pygmaeus STEENSTRUP, 1881 have been rediscovered after more than 70 years at the type locality of/, pygmaeus hebereri GRIMPE, 1931 in Lombok, Indonesia. Occurrence of the animals between a flotsam of garbage indicates the ability to adapt to new habitats. Key words: Cephalopoda, Distribution, Idiosepiidae, Idiosepius pygmaeus, Indonesia Introduction Idiosepiidae are represented by a single genus with seven currently valid species, Idio- sepius biserialis Voss, 1962, /. macrocheir Voss, 1962, /. notoides BERRY, 1921, /. paradoxus (ORTMANN, 1888), /. picteti (JOUBIN, 1894), /. pygmaeus STEENSTRUP, 1881, /. thailandicus CHOTIYAPUTTA, OKUTANI & CHAITIAMVONG, 1991 (for a review see VON BOLETZKY & al. 2005). Their distribution stretches from Russia, Japan, the Indo- Pacific region to Tasmania as well as Moçambique (APPELLÖF 1898; SASAKI 1914; YAMAMOTO 1942; Voss 1962; OKUTANI 1973; Li 1983; Lu & PHILLIPS 1985; NATEE- WATHANA 1997; NESIS & al. 2002; VON BYERN & al. 2005). One conspicuous morpho- logical character of this genus is the adhesive organ located on the posterior part of the dorsal mantle side. This is used for attachment during the day to the lower leaf surfaces of sea grass or algae for camouflage. -
Cephalopod Genomics: a Plan of Strategies and Organization
Cephalopod genomics: A plan of strategies and organization The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters Citation Albertin, Caroline B., Laure Bonnaud, C. Titus Brown, Wendy J. Crookes-Goodson, Rute R. da Fonseca, Carlo Di Cristo, Brian P. Dilkes, et al. 2012. Cephalopod genomics: a plan of strategies and organization. Standards in Genomic Sciences 7(1): 175-188. Published Version doi:10.4056/sigs.3136559 Citable link http://nrs.harvard.edu/urn-3:HUL.InstRepos:11235511 Terms of Use This article was downloaded from Harvard University’s DASH repository, and is made available under the terms and conditions applicable to Other Posted Material, as set forth at http:// nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of- use#LAA Standards in Genomic Sciences (2012) 7:175-188 DOI:10.4056/sigs.3136559 Cephalopod genomics: A plan of strategies and organization Caroline B. Albertin1, Laure Bonnaud2, C. Titus Brown3, Wendy J. Crookes-Goodson4, Rute R. da Fonseca5, Carlo Di Cristo6, Brian P. Dilkes7, Eric Edsinger-Gonzales8, Robert M. Freeman, Jr.9, Roger T. Hanlon10, Kristen M. Koenig11, Annie R. Lindgren12, Mark Q. Martindale13, Patrick Minx14, Leonid L. Moroz15, Marie-Therese Nödl16, Spencer V. Nyholm17, Atsushi Ogura18, Judit R. Pungor19, Joshua J. C. Rosenthal20, Erich M. Schwarz21, Shuichi Shigeno22, Jan M. Strugnell23, Tim Wollesen24, Guojie Zhang25, Clifton W. Ragsdale,1,26* 1Department of Organismal Biology and Anatomy, University of Chicago, Chicago, IL, -
1 §4-71-6.5 List of Restricted Animals [ ] Part A: For
§4-71-6.5 LIST OF RESTRICTED ANIMALS [ ] PART A: FOR RESEARCH AND EXHIBITION SCIENTIFIC NAME COMMON NAME INVERTEBRATES PHYLUM Annelida CLASS Hirudinea ORDER Gnathobdellida FAMILY Hirudinidae Hirudo medicinalis leech, medicinal ORDER Rhynchobdellae FAMILY Glossiphoniidae Helobdella triserialis leech, small snail CLASS Oligochaeta ORDER Haplotaxida FAMILY Euchytraeidae Enchytraeidae (all species in worm, white family) FAMILY Eudrilidae Helodrilus foetidus earthworm FAMILY Lumbricidae Lumbricus terrestris earthworm Allophora (all species in genus) earthworm CLASS Polychaeta ORDER Phyllodocida FAMILY Nereidae Nereis japonica lugworm PHYLUM Arthropoda CLASS Arachnida ORDER Acari FAMILY Phytoseiidae 1 RESTRICTED ANIMAL LIST (Part A) §4-71-6.5 SCIENTIFIC NAME COMMON NAME Iphiseius degenerans predator, spider mite Mesoseiulus longipes predator, spider mite Mesoseiulus macropilis predator, spider mite Neoseiulus californicus predator, spider mite Neoseiulus longispinosus predator, spider mite Typhlodromus occidentalis mite, western predatory FAMILY Tetranychidae Tetranychus lintearius biocontrol agent, gorse CLASS Crustacea ORDER Amphipoda FAMILY Hyalidae Parhyale hawaiensis amphipod, marine ORDER Anomura FAMILY Porcellanidae Petrolisthes cabrolloi crab, porcelain Petrolisthes cinctipes crab, porcelain Petrolisthes elongatus crab, porcelain Petrolisthes eriomerus crab, porcelain Petrolisthes gracilis crab, porcelain Petrolisthes granulosus crab, porcelain Petrolisthes japonicus crab, porcelain Petrolisthes laevigatus crab, porcelain Petrolisthes -
A Lower Limit to Adult Size in Coleoid Cephalopods: Elements of a Discussion
Coleoid cephalopods through time (Warnke K., Keupp H., Boletzky S. v., eds) Berliner Paläobiol. Abh. 03 019-028 Berlin 2003 A LOWER LIMIT TO ADULT SIZE IN COLEOID CEPHALOPODS: ELEMENTS OF A DISCUSSION S. v. Boletzky CNRS, Observatoire Océanologique, Laboratoire Arago, F-66651 Banyuls-sur-Mer, [email protected] ABSTRACT The smallest living cephalopods are coleoids weighing less than 1 gram when adult (the pygmy squid Idiosepius spp., several pygmy species of the genus Octopus), and there are slightly larger species among sepiolid (Sepiola spp.) and loliginid (Pickfordiateuthis spp.) squid, sepiid cuttlefish (e. g. Sepia pulchra); moreover there are dwarf males in three pelagic octopod genera (Argonauta, Tremoctopus, Ocythoë). A common biological feature of these small species are short life-spans, the minimum being 3 months in Idiosepius. Small adult size of a female, along with a short life-span, limits individual fecundity. The adaptive responses to this limitation vary widely among species or groups. The most striking difference appears in the respective egg sizes. In pygmy squid, an individual ovum measures less than 1 mm in diameter, whereas in pygmy octopus, ovum sizes vary between 5 and 12 mm depending on the species. In both cases, maturation and release of eggs covers several weeks. If Idiosepius demonstrates that very small eggs giving rise to very small hatchlings permit rapid attainment of small adult size, within a very short life-span, the high fecundity of Idiosepius suggests massive juvenile mortality, probably relating to the planktonic post-hatching phase. A suggestive difference in fecundity appears within the octopodids: Octopus fitchi has a planktonic post-hatching phase and has a higher fecundity than pygmy species devoid of a planktonic phase. -
Mitochondrial CO1 Genetic Marker-Based Species Diversity of Cuttlefish (Cephalopod; Mollusk) in Manado Bay and Lembeh Strait, North Sulawesi, Indonesia 1Silvester B
Mitochondrial CO1 genetic marker-based species diversity of cuttlefish (Cephalopod; Mollusk) in Manado Bay and Lembeh Strait, North Sulawesi, Indonesia 1Silvester B. Pratasik, 2Marsoedi, 2Diana Arfiati, 2Daduk Setyohadi 1 Aquatic Resources Management Program, Faculty of Fisheries and Marine Science, Sam Ratulangi University, Manado, Indonesia; 2 Aquatic Resources Management, Faculty of Fisheries and Marine Science, Brawijaya University, Malang, Indonesia. Corresponding author: S. B. Pratasik, [email protected] Abstract. This study determines cuttlefish species from Manado Bay and Lembeh Strait, North Sulawesi, based upon the mitochondrial CO1 genetic marker. Sample collection used SCUBA gear and fishermen catch. Seven cuttlefish specimens were collected in this study. DNA genomes of the samples were extracted, and CO1 gene fragments were amplified through PCR and sequenced using Big Dye© terminator chemistry (Perkin Elmer). Species identification was conducted with BLAST method. Results showed that there were four species of cuttlefish in Manado Bay and Lembeh Strait, Sepia latimanus, S. pharaonis, Metasepia g, and Sepia ramani. S. latimanus was represented by 4 individuals, and the rests by only one individual. Phylogenetic analysis revealed that all samples were separated into 4 species groups, SP1, SP3. SP4 and SP10 (group1), SP5 (group2), SP6 (group3) and SP11 (group4). All species belong to important fisheries resources, but they are in insufficient data status, both fishing rate and population level. Key Words: identification, Sepia, CO1 gene. Introduction. Manado Bay has become an income source of local communities from fishing activities and marine tourism activities, such as swimming, diving, and other water sports. It is also used for marine transport medium to reach other islands northward, such as Bunaken, Manado Tua, Siladen, Mantehage, and Naen Islands. -
Cephalopod Guidelines
Reference Resources Caveats from AAALAC’s Council on Accreditation regarding this resource: Guidelines for the Care and Welfare of Cephalopods in Research– A consensus based on an initiative by CephRes, FELASA and the Boyd Group *This reference was adopted by the Council on Accreditation with the following clarification and exceptions: The AAALAC International Council on Accreditation has adopted the “Guidelines for the Care and Welfare of Cephalopods in Research- A consensus based on an initiative by CephRes, FELASA and the Boyd Group” as a Reference Resource with the following two clarifications and one exception: Clarification: The acceptance of these guidelines as a Reference Resource by AAALAC International pertains only to the technical information provided, and not the regulatory stipulations or legal implications (e.g., European Directive 2010/63/EU) presented in this article. AAALAC International considers the information regarding the humane care of cephalopods, including capture, transport, housing, handling, disease detection/ prevention/treatment, survival surgery, husbandry and euthanasia of these sentient and highly intelligent invertebrate marine animals to be appropriate to apply during site visits. Although there are no current regulations or guidelines requiring oversight of the use of invertebrate species in research, teaching or testing in many countries, adhering to the principles of the 3Rs, justifying their use for research, commitment of appropriate resources and institutional oversight (IACUC or equivalent oversight body) is recommended for research activities involving these species. Clarification: Page 13 (4.2, Monitoring water quality) suggests that seawater parameters should be monitored and recorded at least daily, and that recorded information concerning the parameters that are monitored should be stored for at least 5 years. -
Cephalopoda; Idiosepiidae)
Vol. 17: 19–27, 2012 AQUATIC BIOLOGY Published online October 17 doi: 10.3354/ab00445 Aquat Biol Phylogenetic characterisation of the genus Idiosepius (Cephalopoda; Idiosepiidae) Janek von Byern1,*, Rainer Söller2, Gerhard Steiner3 1Cell Imaging and Ultrastructural Research Unit, Life Sciences, University of Vienna, 1090 Vienna, Austria 2QIAGEN Hamburg GmbH, 22767 Hamburg, Germany 3Department of Evolutionary Biology & Emerging Focus: Molecular Phylogenetics, University of Vienna, 1090 Vienna, Austria ABSTRACT: The family Idiosepiidae is an atypical cephalopod group; the member species are the smallest cephalopods in body size, and their phylogenetic position with regard to the other cephalopods as well as the relationships within the genus Idiosepius remain controversial. Cur- rently, 8 recognized species belong to Idiosepius, although the taxonomic position of I. macrocheir and I. thailandicus is uncertain: their diagnostic characters closely overlap with those of I. biseri- alis. To provide further information on the phylogenetic relationships of Idiosepius, 4 mitochondr- ial loci (12S rRNA, 16S rRNA and cytochrome c oxidase subunits I and III) were analysed for all Idiosepius species and several populations. I. macrocheir and I. thailandicus nested within the African and the Indo-Pacific group of I. biserialis, respectively. This indicates that both species were incorrectly assigned to a single species, and that they rather represent junior synonyms of I. biserialis. Furthermore, the species I. biserialis itself exhibits considerable genetic variability: an African and Indo-Pacific region population was evident. Our results revealed 2 new aspects of Idiosepius: a population of I. biserialis from Japan appeared to be closely related to I. paradoxus, a species with 4 rows of suckers on the tentacular club. -
Proceedings of the 3Rd International Symposium Coleoid Cephalopods Through Time
Proceedings of the Dirk Fuchs (editor) 3rd international symposium Coleoid Cephalopods Through Time international symposium symposium international Luxembourg rd 8th - 11th October 2008 Coleoid Cephalopods Through Time Through Cephalopods Coleoid Proceedings 3 Proceedings Dirk Fuchs (editor) Ferrantia Travaux scientifiques du Musée national d'histoire naturelle Luxembourg www.mnhn.lu 59 2010 Ferrantia 59 2010 2010 59 Ferrantia 59 Proceedings of the 3rd international symposium Coleoid Cephalopods Through Time Luxembourg 8th - 11th October 2008 Dirk Fuchs (editor) Luxembourg, 2010 Travaux scientifiques du Musée national d'histoire naturelle Luxembourg Proceedings of the 3rd international symposium Coleoid Cephalopods Through Time Luxembourg 8th - 11th October 2008 Dirk Fuchs (editor) Contents Preface 5 In memoriam Winfried Haas (1934-2007) K. Bandel 6 It's All in the Cues: Octopuses (Enteroctopus dofleini) Learn to Open Jars Roland C. Anderson, Jennifer A. Mather 8 The 'yolk organ' of cephalopod embryos: on transient functions from crawling substratum to provisional knapsack S. von Boletzky 14 Non-invasive methods of identifying and tracking wild squid. R. A. Byrne, J. B. Wood, R. C. Anderson, U. Griebel, J. A. Mather 22 Characterization of the adhesive organ of Idiosepius biserialis Voss, 1962 and Idiosepius pygmaeus Steenstrup, 1881 (Mollusca, Cephalopoda) N. Cyran, W. Klepal, J. von Byern 32 A radula and associated cephalic remains of a Late Carboniferous coleoid from Oklahoma, USA L. A. Doguzhaeva, R. H. Mapes, S. Bengtson, H. Mutvei 37 The first diplobelid coleoid from the Cenomanian of south-eastern India D. Fuchs, A. Vartak, G. Kendrick, M. Ghare 51 A rare and unusual teudopseid coleoid from the Upper Cretaceous of Hâqel (Lebanon) D.Fuchs 61 A new Plesioteuthis with beak from the Kimmeridgian of Nusplingen (Germany) Ch. -
United States National Museum Bulletin 234
i's {(mi lw|f SMITHSONIAN INSTITUTION UNITED STATES NATIONAL MUSEUM BULLETIN 234 WASHINGTON, D.C. 1963 M USEUM OF NATURAL HIS t]o R Y Cephalopods of the Philippine Islands GILBERT L. VOSS SMITHSONIAN INSTITUTION WASHINGTON, 1963 Publications of the United States National Museum The scientific publications of the United States National Museum include two series, Proceedings of the United States National Museum and United States National Museum Bulletin. In these series are published original articles and monogi-aphs dealing with the collections and work of the Museum and setting forth newly acquired facts in the fields of Anthropology, Biology, Geology, History, and Technology. Copies of each publication are distributed to libraries and scientific organizations and to specialists and others interested in the different subjects. The Proceedings, begun in 1878, are intended for the publication, in separate form, of shorter papers. These are gathered in volumes, octavo in size, with the publication of each paper recorded in the table of contents of the volume. In the Bulletin series, the first of which was issued in 1875, appear longer, separate publications consisting of monographs (occasionally in several parts) and volumes in which are collected works on related subjects. Bulletins are either octavo or quarto in size, depending on the needs of the presentation. Since 1902 papers relating to the botanical collections of the Museum have been published in the Bulletin series under the heading Contributions from the United States National Eerbarium. This work forms number 234 of the Bulletin series. Frank A. Tayloe, Director, United States National Museum. /^HSO,^ U.S* GOVERNMENT PRINTING OFFICE WASHINGTON i 1963 For sale by the Superintendent of Documents, U.S. -
4. List of Nominal Species
Cephalopods of the World 213 4. LIST OF NOMINAL SPECIES The following list gives information (horizontally) in the order (i) the scientific name as it originally appeared, in alphabetical order according to the specific name; (ii) the author(s); (iii) date of publication; and (iv) present allocation. NOMINAL SPECIES PRESENT ALLOCATION NAUTILIDAE Nautilus belauensis Saunders, 1981 Nautilus belauensis Nautilus macromphalus Sowerby, 1849 Nautilus macromphalus Nautilus perforatus Conrad, 1847 Allonautilus perforatus Nautilus pompilius Linnaeus (1758) Nautilus pompilius Nautilus repertus Iredale, 1944 Nautilus repertus Nautilus scrobiculatus Lightfoot, 1786 Allonautilus scrobiculatus Nautilus stenomphalus Sowerby, 1849 Nautilus stenomphalus SEPIIDAE Acanthosepion whitleyana Iredale, 1926 Sepia whitleyana Arctosepia limata Iredale, 1926 Sepia limata Arctosepia rhoda Iredale, 1954 Sepia rhoda Blandosepia bartletti Iredale, 1954 Sepia bartletti Blandosepia baxteri Iredale, 1940 Sepia baxteri Doratosepion trygoninum Rochebrune, 1884 Sepia trygonina Glyptosepia opipara Iredale, 1926 Sepia opipara Hemisepius typicus Steenstrup, 1875 Sepia typica Rhombosepion hieronis Robson, 1924a Sepia hieronis Rhombosepion robsoni Massy, 1927 Sepia robsoni Sepia aculeata Van Hasselt, 1835 Sepia aculeata Sepia acuminata Smith, 1916 Sepia acuminata Sepia adami Roeleveld, 1972 Sepia adami Sepia andreana Steenstrup, 1875 Sepia andreana Sepia angulata Roeleveld, 1972 Sepia angulata Sepia apama Gray, 1849 Sepia apama Sepia appellofi Wülker, 1910 Sepia appellofi Sepia -
Cuttlefish Early Development and Behaviour Under Future High CO2 Conditions
UNIVERSIDADE DE LISBOA FACULDADE DE CIÊNCIAS DEPARTAMENTO DE BIOLOGIA ANIMAL Cuttlefish early development and behaviour under future high CO2 conditions Érica Raquel Ferreira e Moura Mestrado em Biologia da Conservação Dissertação orientada por: Doutora Marta Pimentel e Doutor Rui Rosa 2019 II “The question is, are we happy to suppose that our grandchildren may never be able to see an elephant except in a picture book?” David Attenborough III Agradecimentos Desde pequeninos que somos incentivados a seguir os passos dos nossos educadores, eles são o nosso modelo e, normalmente, a intenção da criança é “eu quero ser como…”. Não, não segui esse caminho, pelo menos não em termos profissionais. Na família, sempre houve uma ligação aos animais e, desde que me lembro, sempre fui habituada a isso, ora porque os tínhamos em casa, ora porque os íamos ver a algum lado, ora porque íamos à pesca. Além disso, ainda mal sabia nadar e já tratava o mar como casa, e que peixinho que era… Como um peixe dentro de água, que gostava de ser todas as vezes que ia à praia, desenvolvi um carinho mais especial por aqueles que lá vivem. E, apesar de gostar bastante de amanhar o peixe, acho que essa paixão começou a estar ainda mais à flor da pele quando, num belo dia de pesca, tentei salvar uma tainha - ora, escusado será dizer, acabou por morrer no meio de tantos cuidados intensivos. Digamos que isto foi só o início de uma bela história, que começou ainda nem eu era gente e que está muito longe do fim.