Annual Report 2014
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Social Learning and Its Role in Anti-Predator Behaviour by Coral Reef Fishes
ResearchOnline@JCU This file is part of the following reference: Manassa, Rachel Penelope (2013) Social learning and its role in anti-predator behaviour by coral reef fishes. PhD thesis, James Cook University. Access to this file is available from: http://researchonline.jcu.edu.au/40088/ The author has certified to JCU that they have made a reasonable effort to gain permission and acknowledge the owner of any third party copyright material included in this document. If you believe that this is not the case, please contact [email protected] and quote http://researchonline.jcu.edu.au/40088/ SOCIAL LEARNING AND ITS ROLE IN ANTI-PREDATOR BEHAVIOUR BY CORAL REEF FISHES Thesis submitted by Rachel Penelope MANASSA BSc (Hons) in August 2013 for the degree of Doctor of Philosophy School of Marine & Tropical Biology James Cook University STATEMENT OF ACCESS I, the undersigned, the author of this work, understand that James Cook University will make it available for use within the University Library and via the Australian Digital Thesis Network for use elsewhere. I understand that, as an unpublished work, a thesis has significant protection under the Copyright Act and I do not wish to place any restrictions on access to this work. 28th August 2013 Signature Date I STATEMENT OF SOURCES DECLARATION I declare that this thesis is my own work and has not been submitted in any form for another degree or diploma at any university or other institution or tertiary education. Information derived from the published or unpublished work of others has been acknowledged in the text and a list of references is given. -
Cephalopoda: Idiosepiidae) in Indonesian Waters
ZOBODAT - www.zobodat.at Zoologisch-Botanische Datenbank/Zoological-Botanical Database Digitale Literatur/Digital Literature Zeitschrift/Journal: Annalen des Naturhistorischen Museums in Wien Jahr/Year: 2007 Band/Volume: 108B Autor(en)/Author(s): Klepal Waltraud, von Byern J. Artikel/Article: Occurrence of Idiosepius pygmaeus (Cephalopoda, Idiosepiidae) in Indonesian waters. 137-144 ©Naturhistorisches Museum Wien, download unter www.biologiezentrum.at Ann. Naturhist. Mus. Wien 108 B 137- 144 Wien, Mai 2007 Occurrence of Idiosepius pygmaeus (Cephalopoda: Idiosepiidae) in Indonesian waters J. von Byern* & W. Klepal* Abstract Individuals of/, pygmaeus STEENSTRUP, 1881 have been rediscovered after more than 70 years at the type locality of/, pygmaeus hebereri GRIMPE, 1931 in Lombok, Indonesia. Occurrence of the animals between a flotsam of garbage indicates the ability to adapt to new habitats. Key words: Cephalopoda, Distribution, Idiosepiidae, Idiosepius pygmaeus, Indonesia Introduction Idiosepiidae are represented by a single genus with seven currently valid species, Idio- sepius biserialis Voss, 1962, /. macrocheir Voss, 1962, /. notoides BERRY, 1921, /. paradoxus (ORTMANN, 1888), /. picteti (JOUBIN, 1894), /. pygmaeus STEENSTRUP, 1881, /. thailandicus CHOTIYAPUTTA, OKUTANI & CHAITIAMVONG, 1991 (for a review see VON BOLETZKY & al. 2005). Their distribution stretches from Russia, Japan, the Indo- Pacific region to Tasmania as well as Moçambique (APPELLÖF 1898; SASAKI 1914; YAMAMOTO 1942; Voss 1962; OKUTANI 1973; Li 1983; Lu & PHILLIPS 1985; NATEE- WATHANA 1997; NESIS & al. 2002; VON BYERN & al. 2005). One conspicuous morpho- logical character of this genus is the adhesive organ located on the posterior part of the dorsal mantle side. This is used for attachment during the day to the lower leaf surfaces of sea grass or algae for camouflage. -
Cephalopod Genomics: a Plan of Strategies and Organization
Cephalopod genomics: A plan of strategies and organization The Harvard community has made this article openly available. Please share how this access benefits you. Your story matters Citation Albertin, Caroline B., Laure Bonnaud, C. Titus Brown, Wendy J. Crookes-Goodson, Rute R. da Fonseca, Carlo Di Cristo, Brian P. Dilkes, et al. 2012. Cephalopod genomics: a plan of strategies and organization. Standards in Genomic Sciences 7(1): 175-188. Published Version doi:10.4056/sigs.3136559 Citable link http://nrs.harvard.edu/urn-3:HUL.InstRepos:11235511 Terms of Use This article was downloaded from Harvard University’s DASH repository, and is made available under the terms and conditions applicable to Other Posted Material, as set forth at http:// nrs.harvard.edu/urn-3:HUL.InstRepos:dash.current.terms-of- use#LAA Standards in Genomic Sciences (2012) 7:175-188 DOI:10.4056/sigs.3136559 Cephalopod genomics: A plan of strategies and organization Caroline B. Albertin1, Laure Bonnaud2, C. Titus Brown3, Wendy J. Crookes-Goodson4, Rute R. da Fonseca5, Carlo Di Cristo6, Brian P. Dilkes7, Eric Edsinger-Gonzales8, Robert M. Freeman, Jr.9, Roger T. Hanlon10, Kristen M. Koenig11, Annie R. Lindgren12, Mark Q. Martindale13, Patrick Minx14, Leonid L. Moroz15, Marie-Therese Nödl16, Spencer V. Nyholm17, Atsushi Ogura18, Judit R. Pungor19, Joshua J. C. Rosenthal20, Erich M. Schwarz21, Shuichi Shigeno22, Jan M. Strugnell23, Tim Wollesen24, Guojie Zhang25, Clifton W. Ragsdale,1,26* 1Department of Organismal Biology and Anatomy, University of Chicago, Chicago, IL, -
Third Issue of the 2019 ISCE Newsletter
Volume 36| Issue 3 | 26 September 2019 — In This Issue — Message from the President Not too long ago, the 35th Annual Meeting of the International Society of Chemical Ecology (ISCE) President‘s Message has been held in the beautiful U.S. southern metropolitan city, Atlanta. As always, we have Past-President’s Message concluded with another huge success, attracting over 280 ISCE members from all over the world. ISCE Meeting 2019 On behalf of the Society, I would like to thank - Summary of the meeting Mark Hay and Julia Kubanek from the Georgia - Student travel awards Institute of Technology, as well as all local - Student presentation awards organizing committee members for bringing us another exciting meeting with many fascinating research studies in marine Upcoming 2020 ISCE Meeting chemical ecology, in addition to our traditional outstanding research 2019 ISCE Award winners accomplishments. Obviously, this inevitably creates a lot pressure for our future conference organizers, as the bar of organizing conference has been raised year 2020 ISCE Award Winners after year. However, I am confident that there are no limits to what we can Call for Nominations - ISCE Executives achieve. and Awards Needless to say, the ISCE community is probably one of the best scientific societies that I have been a part of in the past 30 years of my scientific career. In Call for Design of the Presidential Tie today’s age, our increasingly diversified chemical ecology world has drawn and Scarf tremendous interest from scientists of other scientific fields to explore novel Koji Nakanishi Symposium ideas in all scientific disciplines. -
1 §4-71-6.5 List of Restricted Animals [ ] Part A: For
§4-71-6.5 LIST OF RESTRICTED ANIMALS [ ] PART A: FOR RESEARCH AND EXHIBITION SCIENTIFIC NAME COMMON NAME INVERTEBRATES PHYLUM Annelida CLASS Hirudinea ORDER Gnathobdellida FAMILY Hirudinidae Hirudo medicinalis leech, medicinal ORDER Rhynchobdellae FAMILY Glossiphoniidae Helobdella triserialis leech, small snail CLASS Oligochaeta ORDER Haplotaxida FAMILY Euchytraeidae Enchytraeidae (all species in worm, white family) FAMILY Eudrilidae Helodrilus foetidus earthworm FAMILY Lumbricidae Lumbricus terrestris earthworm Allophora (all species in genus) earthworm CLASS Polychaeta ORDER Phyllodocida FAMILY Nereidae Nereis japonica lugworm PHYLUM Arthropoda CLASS Arachnida ORDER Acari FAMILY Phytoseiidae 1 RESTRICTED ANIMAL LIST (Part A) §4-71-6.5 SCIENTIFIC NAME COMMON NAME Iphiseius degenerans predator, spider mite Mesoseiulus longipes predator, spider mite Mesoseiulus macropilis predator, spider mite Neoseiulus californicus predator, spider mite Neoseiulus longispinosus predator, spider mite Typhlodromus occidentalis mite, western predatory FAMILY Tetranychidae Tetranychus lintearius biocontrol agent, gorse CLASS Crustacea ORDER Amphipoda FAMILY Hyalidae Parhyale hawaiensis amphipod, marine ORDER Anomura FAMILY Porcellanidae Petrolisthes cabrolloi crab, porcelain Petrolisthes cinctipes crab, porcelain Petrolisthes elongatus crab, porcelain Petrolisthes eriomerus crab, porcelain Petrolisthes gracilis crab, porcelain Petrolisthes granulosus crab, porcelain Petrolisthes japonicus crab, porcelain Petrolisthes laevigatus crab, porcelain Petrolisthes -
Ocean Acidification Does Not Limit Squid Metabolism Via Blood Oxygen Supply Matthew A
© 2018. Published by The Company of Biologists Ltd | Journal of Experimental Biology (2018) 221, jeb187443. doi:10.1242/jeb.187443 RESEARCH ARTICLE Ocean acidification does not limit squid metabolism via blood oxygen supply Matthew A. Birk1,2,*, Erin L. McLean2 and Brad A. Seibel1,2 ABSTRACT Shallow-water active squid, such as those in the families Ocean acidification is hypothesized to limit the performance of squid Loliginidae and Ommastrephidae, are ideal study organisms for owing to their exceptional oxygen demand and pH sensitivity of examining impacts of OA on O2 supply because their respiratory blood–oxygen binding, which may reduce oxygen supply in acidified proteins (hemocyanins) are among the most pH sensitive of any marine animal (Brix et al., 1989; Bridges, 1994; Pörtner and waters. The critical oxygen partial pressure (Pcrit), the PO2 below which oxygen supply cannot match basal demand, is a commonly Reipschläger, 1996; Seibel, 2016). Sensitivity to pH, quantified as the Bohr coefficient (Bohr et al., 1904), is optimal for O2 delivery reported index of hypoxia tolerance. Any CO2-induced reduction in to the tissues at half the respiratory quotient (Lapennas, 1983), oxygen supply should be apparent as an increase in Pcrit. In this which would be between −0.35 and −0.5 in cephalopods. Squid study, we assessed the effects of CO2 (46–143 Pa; 455–1410 μatm) hemocyanin, however, often has a Bohr coefficient of <−1 on the metabolic rate and Pcrit of two squid species – Dosidicus gigas and Doryteuthis pealeii – through manipulative experiments. We also (Bridges, 1994). The extreme sensitivity in cephalopods may – developed a model, with inputs for hemocyanin pH sensitivity, blood result in large impairments in blood O2 binding affinity from relatively small changes in blood pH. -
A Lower Limit to Adult Size in Coleoid Cephalopods: Elements of a Discussion
Coleoid cephalopods through time (Warnke K., Keupp H., Boletzky S. v., eds) Berliner Paläobiol. Abh. 03 019-028 Berlin 2003 A LOWER LIMIT TO ADULT SIZE IN COLEOID CEPHALOPODS: ELEMENTS OF A DISCUSSION S. v. Boletzky CNRS, Observatoire Océanologique, Laboratoire Arago, F-66651 Banyuls-sur-Mer, [email protected] ABSTRACT The smallest living cephalopods are coleoids weighing less than 1 gram when adult (the pygmy squid Idiosepius spp., several pygmy species of the genus Octopus), and there are slightly larger species among sepiolid (Sepiola spp.) and loliginid (Pickfordiateuthis spp.) squid, sepiid cuttlefish (e. g. Sepia pulchra); moreover there are dwarf males in three pelagic octopod genera (Argonauta, Tremoctopus, Ocythoë). A common biological feature of these small species are short life-spans, the minimum being 3 months in Idiosepius. Small adult size of a female, along with a short life-span, limits individual fecundity. The adaptive responses to this limitation vary widely among species or groups. The most striking difference appears in the respective egg sizes. In pygmy squid, an individual ovum measures less than 1 mm in diameter, whereas in pygmy octopus, ovum sizes vary between 5 and 12 mm depending on the species. In both cases, maturation and release of eggs covers several weeks. If Idiosepius demonstrates that very small eggs giving rise to very small hatchlings permit rapid attainment of small adult size, within a very short life-span, the high fecundity of Idiosepius suggests massive juvenile mortality, probably relating to the planktonic post-hatching phase. A suggestive difference in fecundity appears within the octopodids: Octopus fitchi has a planktonic post-hatching phase and has a higher fecundity than pygmy species devoid of a planktonic phase. -
Mitochondrial CO1 Genetic Marker-Based Species Diversity of Cuttlefish (Cephalopod; Mollusk) in Manado Bay and Lembeh Strait, North Sulawesi, Indonesia 1Silvester B
Mitochondrial CO1 genetic marker-based species diversity of cuttlefish (Cephalopod; Mollusk) in Manado Bay and Lembeh Strait, North Sulawesi, Indonesia 1Silvester B. Pratasik, 2Marsoedi, 2Diana Arfiati, 2Daduk Setyohadi 1 Aquatic Resources Management Program, Faculty of Fisheries and Marine Science, Sam Ratulangi University, Manado, Indonesia; 2 Aquatic Resources Management, Faculty of Fisheries and Marine Science, Brawijaya University, Malang, Indonesia. Corresponding author: S. B. Pratasik, [email protected] Abstract. This study determines cuttlefish species from Manado Bay and Lembeh Strait, North Sulawesi, based upon the mitochondrial CO1 genetic marker. Sample collection used SCUBA gear and fishermen catch. Seven cuttlefish specimens were collected in this study. DNA genomes of the samples were extracted, and CO1 gene fragments were amplified through PCR and sequenced using Big Dye© terminator chemistry (Perkin Elmer). Species identification was conducted with BLAST method. Results showed that there were four species of cuttlefish in Manado Bay and Lembeh Strait, Sepia latimanus, S. pharaonis, Metasepia g, and Sepia ramani. S. latimanus was represented by 4 individuals, and the rests by only one individual. Phylogenetic analysis revealed that all samples were separated into 4 species groups, SP1, SP3. SP4 and SP10 (group1), SP5 (group2), SP6 (group3) and SP11 (group4). All species belong to important fisheries resources, but they are in insufficient data status, both fishing rate and population level. Key Words: identification, Sepia, CO1 gene. Introduction. Manado Bay has become an income source of local communities from fishing activities and marine tourism activities, such as swimming, diving, and other water sports. It is also used for marine transport medium to reach other islands northward, such as Bunaken, Manado Tua, Siladen, Mantehage, and Naen Islands. -
Cephalopod Guidelines
Reference Resources Caveats from AAALAC’s Council on Accreditation regarding this resource: Guidelines for the Care and Welfare of Cephalopods in Research– A consensus based on an initiative by CephRes, FELASA and the Boyd Group *This reference was adopted by the Council on Accreditation with the following clarification and exceptions: The AAALAC International Council on Accreditation has adopted the “Guidelines for the Care and Welfare of Cephalopods in Research- A consensus based on an initiative by CephRes, FELASA and the Boyd Group” as a Reference Resource with the following two clarifications and one exception: Clarification: The acceptance of these guidelines as a Reference Resource by AAALAC International pertains only to the technical information provided, and not the regulatory stipulations or legal implications (e.g., European Directive 2010/63/EU) presented in this article. AAALAC International considers the information regarding the humane care of cephalopods, including capture, transport, housing, handling, disease detection/ prevention/treatment, survival surgery, husbandry and euthanasia of these sentient and highly intelligent invertebrate marine animals to be appropriate to apply during site visits. Although there are no current regulations or guidelines requiring oversight of the use of invertebrate species in research, teaching or testing in many countries, adhering to the principles of the 3Rs, justifying their use for research, commitment of appropriate resources and institutional oversight (IACUC or equivalent oversight body) is recommended for research activities involving these species. Clarification: Page 13 (4.2, Monitoring water quality) suggests that seawater parameters should be monitored and recorded at least daily, and that recorded information concerning the parameters that are monitored should be stored for at least 5 years. -
Cephalopoda; Idiosepiidae)
Vol. 17: 19–27, 2012 AQUATIC BIOLOGY Published online October 17 doi: 10.3354/ab00445 Aquat Biol Phylogenetic characterisation of the genus Idiosepius (Cephalopoda; Idiosepiidae) Janek von Byern1,*, Rainer Söller2, Gerhard Steiner3 1Cell Imaging and Ultrastructural Research Unit, Life Sciences, University of Vienna, 1090 Vienna, Austria 2QIAGEN Hamburg GmbH, 22767 Hamburg, Germany 3Department of Evolutionary Biology & Emerging Focus: Molecular Phylogenetics, University of Vienna, 1090 Vienna, Austria ABSTRACT: The family Idiosepiidae is an atypical cephalopod group; the member species are the smallest cephalopods in body size, and their phylogenetic position with regard to the other cephalopods as well as the relationships within the genus Idiosepius remain controversial. Cur- rently, 8 recognized species belong to Idiosepius, although the taxonomic position of I. macrocheir and I. thailandicus is uncertain: their diagnostic characters closely overlap with those of I. biseri- alis. To provide further information on the phylogenetic relationships of Idiosepius, 4 mitochondr- ial loci (12S rRNA, 16S rRNA and cytochrome c oxidase subunits I and III) were analysed for all Idiosepius species and several populations. I. macrocheir and I. thailandicus nested within the African and the Indo-Pacific group of I. biserialis, respectively. This indicates that both species were incorrectly assigned to a single species, and that they rather represent junior synonyms of I. biserialis. Furthermore, the species I. biserialis itself exhibits considerable genetic variability: an African and Indo-Pacific region population was evident. Our results revealed 2 new aspects of Idiosepius: a population of I. biserialis from Japan appeared to be closely related to I. paradoxus, a species with 4 rows of suckers on the tentacular club. -
The Role of Boldness and Other Personality Traits in the Ecology of Juvenile Marine Fishes
ResearchOnline@JCU This file is part of the following reference: White, James Ryan (2015) The role of boldness and other personality traits in the ecology of juvenile marine fishes. PhD thesis, James Cook University. Access to this file is available from: http://researchonline.jcu.edu.au/45988/ The author has certified to JCU that they have made a reasonable effort to gain permission and acknowledge the owner of any third party copyright material included in this document. If you believe that this is not the case, please contact [email protected] and quote http://researchonline.jcu.edu.au/45988/ The role of boldness and other personality traits in the ecology of juvenile marine fishes Thesis submitted by James Ryan White BSc (University of California, Santa Cruz) MAppSci (James Cook University) For the degree of Doctor of Philosophy College of Marine and Environmental Sciences James Cook University Townsville, Queensland November 2015 i Statement of the Contribution of Others Financial Support James Cook University International Postgraduate Scholarship College of Marine and Environmental Sciences ARC Centre of Excellence for Coral Reef Studies AIMS@JCU Statistical and Analytical Support Prof. Mark McCormick Dr. Maud Ferrari Dr. Rabiul Beg Dr. Niels Dingemanse Dr. Ned Dochtermann Supervision Prof. Mark McCormick Dr. Mark Meekan Editorial Support Prof. Mark McCormick Dr. Mark Meekan ii Declaration on Ethics This research presented and reported in this thesis was conducted in compliance with the National Health and Medical Research Council (NHMRC) Australian Code of Practice for the Care and Use of Animals for Scientific Purposes, 7th Edition, 2004 and the Queensland Animal Care and Protection Act, 2001. -
Proceedings of the 3Rd International Symposium Coleoid Cephalopods Through Time
Proceedings of the Dirk Fuchs (editor) 3rd international symposium Coleoid Cephalopods Through Time international symposium symposium international Luxembourg rd 8th - 11th October 2008 Coleoid Cephalopods Through Time Through Cephalopods Coleoid Proceedings 3 Proceedings Dirk Fuchs (editor) Ferrantia Travaux scientifiques du Musée national d'histoire naturelle Luxembourg www.mnhn.lu 59 2010 Ferrantia 59 2010 2010 59 Ferrantia 59 Proceedings of the 3rd international symposium Coleoid Cephalopods Through Time Luxembourg 8th - 11th October 2008 Dirk Fuchs (editor) Luxembourg, 2010 Travaux scientifiques du Musée national d'histoire naturelle Luxembourg Proceedings of the 3rd international symposium Coleoid Cephalopods Through Time Luxembourg 8th - 11th October 2008 Dirk Fuchs (editor) Contents Preface 5 In memoriam Winfried Haas (1934-2007) K. Bandel 6 It's All in the Cues: Octopuses (Enteroctopus dofleini) Learn to Open Jars Roland C. Anderson, Jennifer A. Mather 8 The 'yolk organ' of cephalopod embryos: on transient functions from crawling substratum to provisional knapsack S. von Boletzky 14 Non-invasive methods of identifying and tracking wild squid. R. A. Byrne, J. B. Wood, R. C. Anderson, U. Griebel, J. A. Mather 22 Characterization of the adhesive organ of Idiosepius biserialis Voss, 1962 and Idiosepius pygmaeus Steenstrup, 1881 (Mollusca, Cephalopoda) N. Cyran, W. Klepal, J. von Byern 32 A radula and associated cephalic remains of a Late Carboniferous coleoid from Oklahoma, USA L. A. Doguzhaeva, R. H. Mapes, S. Bengtson, H. Mutvei 37 The first diplobelid coleoid from the Cenomanian of south-eastern India D. Fuchs, A. Vartak, G. Kendrick, M. Ghare 51 A rare and unusual teudopseid coleoid from the Upper Cretaceous of Hâqel (Lebanon) D.Fuchs 61 A new Plesioteuthis with beak from the Kimmeridgian of Nusplingen (Germany) Ch.