Eastside Lichen Report for Washington and Oregon
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St Kilda Lichen Survey April 2014
A REPORT TO NATIONAL TRUST FOR SCOTLAND St Kilda Lichen Survey April 2014 Andy Acton, Brian Coppins, John Douglass & Steve Price Looking down to Village Bay, St. Kilda from Glacan Conachair Andy Acton [email protected] Brian Coppins [email protected] St. Kilda Lichen Survey Andy Acton, Brian Coppins, John Douglass, Steve Price Table of Contents 1 INTRODUCTION ............................................................................................................ 3 1.1 Background............................................................................................................. 3 1.2 Study areas............................................................................................................. 4 2 METHODOLOGY ........................................................................................................... 6 2.1 Field survey ............................................................................................................ 6 2.2 Data collation, laboratory work ................................................................................ 6 2.3 Ecological importance ............................................................................................. 7 2.4 Constraints ............................................................................................................. 7 3 RESULTS SUMMARY ................................................................................................... 8 4 MARITIME GRASSLAND (INCLUDING SWARDS DOMINATED BY PLANTAGO MARITIMA AND ARMERIA -
1307 Fungi Representing 1139 Infrageneric Taxa, 317 Genera and 66 Families ⇑ Jolanta Miadlikowska A, , Frank Kauff B,1, Filip Högnabba C, Jeffrey C
Molecular Phylogenetics and Evolution 79 (2014) 132–168 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families ⇑ Jolanta Miadlikowska a, , Frank Kauff b,1, Filip Högnabba c, Jeffrey C. Oliver d,2, Katalin Molnár a,3, Emily Fraker a,4, Ester Gaya a,5, Josef Hafellner e, Valérie Hofstetter a,6, Cécile Gueidan a,7, Mónica A.G. Otálora a,8, Brendan Hodkinson a,9, Martin Kukwa f, Robert Lücking g, Curtis Björk h, Harrie J.M. Sipman i, Ana Rosa Burgaz j, Arne Thell k, Alfredo Passo l, Leena Myllys c, Trevor Goward h, Samantha Fernández-Brime m, Geir Hestmark n, James Lendemer o, H. Thorsten Lumbsch g, Michaela Schmull p, Conrad L. Schoch q, Emmanuël Sérusiaux r, David R. Maddison s, A. Elizabeth Arnold t, François Lutzoni a,10, Soili Stenroos c,10 a Department of Biology, Duke University, Durham, NC 27708-0338, USA b FB Biologie, Molecular Phylogenetics, 13/276, TU Kaiserslautern, Postfach 3049, 67653 Kaiserslautern, Germany c Botanical Museum, Finnish Museum of Natural History, FI-00014 University of Helsinki, Finland d Department of Ecology and Evolutionary Biology, Yale University, 358 ESC, 21 Sachem Street, New Haven, CT 06511, USA e Institut für Botanik, Karl-Franzens-Universität, Holteigasse 6, A-8010 Graz, Austria f Department of Plant Taxonomy and Nature Conservation, University of Gdan´sk, ul. Wita Stwosza 59, 80-308 Gdan´sk, Poland g Science and Education, The Field Museum, 1400 S. -
Lichens and Associated Fungi from Glacier Bay National Park, Alaska
The Lichenologist (2020), 52,61–181 doi:10.1017/S0024282920000079 Standard Paper Lichens and associated fungi from Glacier Bay National Park, Alaska Toby Spribille1,2,3 , Alan M. Fryday4 , Sergio Pérez-Ortega5 , Måns Svensson6, Tor Tønsberg7, Stefan Ekman6 , Håkon Holien8,9, Philipp Resl10 , Kevin Schneider11, Edith Stabentheiner2, Holger Thüs12,13 , Jan Vondrák14,15 and Lewis Sharman16 1Department of Biological Sciences, CW405, University of Alberta, Edmonton, Alberta T6G 2R3, Canada; 2Department of Plant Sciences, Institute of Biology, University of Graz, NAWI Graz, Holteigasse 6, 8010 Graz, Austria; 3Division of Biological Sciences, University of Montana, 32 Campus Drive, Missoula, Montana 59812, USA; 4Herbarium, Department of Plant Biology, Michigan State University, East Lansing, Michigan 48824, USA; 5Real Jardín Botánico (CSIC), Departamento de Micología, Calle Claudio Moyano 1, E-28014 Madrid, Spain; 6Museum of Evolution, Uppsala University, Norbyvägen 16, SE-75236 Uppsala, Sweden; 7Department of Natural History, University Museum of Bergen Allégt. 41, P.O. Box 7800, N-5020 Bergen, Norway; 8Faculty of Bioscience and Aquaculture, Nord University, Box 2501, NO-7729 Steinkjer, Norway; 9NTNU University Museum, Norwegian University of Science and Technology, NO-7491 Trondheim, Norway; 10Faculty of Biology, Department I, Systematic Botany and Mycology, University of Munich (LMU), Menzinger Straße 67, 80638 München, Germany; 11Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK; 12Botany Department, State Museum of Natural History Stuttgart, Rosenstein 1, 70191 Stuttgart, Germany; 13Natural History Museum, Cromwell Road, London SW7 5BD, UK; 14Institute of Botany of the Czech Academy of Sciences, Zámek 1, 252 43 Průhonice, Czech Republic; 15Department of Botany, Faculty of Science, University of South Bohemia, Branišovská 1760, CZ-370 05 České Budějovice, Czech Republic and 16Glacier Bay National Park & Preserve, P.O. -
A Multigene Phylogenetic Synthesis for the Class Lecanoromycetes (Ascomycota): 1307 Fungi Representing 1139 Infrageneric Taxa, 317 Genera and 66 Families
A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families Miadlikowska, J., Kauff, F., Högnabba, F., Oliver, J. C., Molnár, K., Fraker, E., ... & Stenroos, S. (2014). A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families. Molecular Phylogenetics and Evolution, 79, 132-168. doi:10.1016/j.ympev.2014.04.003 10.1016/j.ympev.2014.04.003 Elsevier Version of Record http://cdss.library.oregonstate.edu/sa-termsofuse Molecular Phylogenetics and Evolution 79 (2014) 132–168 Contents lists available at ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev A multigene phylogenetic synthesis for the class Lecanoromycetes (Ascomycota): 1307 fungi representing 1139 infrageneric taxa, 317 genera and 66 families ⇑ Jolanta Miadlikowska a, , Frank Kauff b,1, Filip Högnabba c, Jeffrey C. Oliver d,2, Katalin Molnár a,3, Emily Fraker a,4, Ester Gaya a,5, Josef Hafellner e, Valérie Hofstetter a,6, Cécile Gueidan a,7, Mónica A.G. Otálora a,8, Brendan Hodkinson a,9, Martin Kukwa f, Robert Lücking g, Curtis Björk h, Harrie J.M. Sipman i, Ana Rosa Burgaz j, Arne Thell k, Alfredo Passo l, Leena Myllys c, Trevor Goward h, Samantha Fernández-Brime m, Geir Hestmark n, James Lendemer o, H. Thorsten Lumbsch g, Michaela Schmull p, Conrad L. Schoch q, Emmanuël Sérusiaux r, David R. Maddison s, A. Elizabeth Arnold t, François Lutzoni a,10, -
Shropshire Fungus Checklist 2010
THE CHECKLIST OF SHROPSHIRE FUNGI 2011 Contents Page Introduction 2 Name changes 3 Taxonomic Arrangement (with page numbers) 19 Checklist 25 Indicator species 229 Rare and endangered fungi in /Shropshire (Excluding BAP species) 230 Important sites for fungi in Shropshire 232 A List of BAP species and their status in Shropshire 233 Acknowledgements and References 234 1 CHECKLIST OF SHROPSHIRE FUNGI Introduction The county of Shropshire (VC40) is large and landlocked and contains all major habitats, apart from coast and dune. These include the uplands of the Clees, Stiperstones and Long Mynd with their associated heath land, forested land such as the Forest of Wyre and the Mortimer Forest, the lowland bogs and meres in the north of the county, and agricultural land scattered with small woodlands and copses. This diversity makes Shropshire unique. The Shropshire Fungus Group has been in existence for 18 years. (Inaugural meeting 6th December 1992. The aim was to produce a fungus flora for the county. This aim has not yet been realised for a number of reasons, chief amongst these are manpower and cost. The group has however collected many records by trawling the archives, contributions from interested individuals/groups, and by field meetings. It is these records that are published here. The first Shropshire checklist was published in 1997. Many more records have now been added and nearly 40,000 of these have now been added to the national British Mycological Society’s database, the Fungus Record Database for Britain and Ireland (FRDBI). During this ten year period molecular biology, i.e. DNA analysis has been applied to fungal classification. -
Adaptation and Interaction of Saxicolous Crustose Lichens with Metals Ole William Purvis
Purvis Botanical Studies 2014, 55:23 http://www.as-botanicalstudies.com/content/55/1/23 REVIEW Open Access Adaptation and interaction of saxicolous crustose lichens with metals Ole William Purvis Abstract One of the most successful mechanisms enabling fungi to survive in extreme subaerial environments is by formation of mutualistic symbioses with algae and/or cyanobacteria as lichens. Collections, field and mineral weathering studies and developments in modern instrumental and analytical techniques have considerably advanced knowledge in understanding tolerance mechanisms to stress, environmental adaptation, species concepts and evolutionary processes in lichens colonising metalliferous habitats. This review focuses on the predominantly saxicolous, crustose, taxonomically notoriously challenging Acarospora sens. lat. Pioneering studies investigating element and substance localization in Acarospora sens. lat. in different geological terrains led to the discovery of novel fixation mechanisms, new minerals and substances associated with lichens, and new taxa and evolutionary lineages. Acarospora sens. lat. are generally under-represented in collections. Systematic sampling of Acarospora sens. lat. and other saxicolous lichens, in different mineralogical environments is now required, a priority being those occurring in extreme habitats at risk from climatic and other environmental changes. The potential for the discovery of new lichen and mineral species associated with Acarospora and other saxicolous crustose lichens, is high. These may represent special mechanisms to tolerate metal toxicity and other forms of environmental stress, including photoprotection. Keywords: Acarospora; Acarosporaceae; Lichen; Metal; Tolerance; Adaptation; Evolution Review metal speciation and mobility. Even metals essential Introduction for life can exert toxicity when present above certain One of the most successful mechanisms enabling fungi threshold concentrations (Gadd, 2011). -
Piedmont Lichen Inventory
PIEDMONT LICHEN INVENTORY: BUILDING A LICHEN BIODIVERSITY BASELINE FOR THE PIEDMONT ECOREGION OF NORTH CAROLINA, USA By Gary B. Perlmutter B.S. Zoology, Humboldt State University, Arcata, CA 1991 A Thesis Submitted to the Staff of The North Carolina Botanical Garden University of North Carolina at Chapel Hill Advisor: Dr. Johnny Randall As Partial Fulfilment of the Requirements For the Certificate in Native Plant Studies 15 May 2009 Perlmutter – Piedmont Lichen Inventory Page 2 This Final Project, whose results are reported herein with sections also published in the scientific literature, is dedicated to Daniel G. Perlmutter, who urged that I return to academia. And to Theresa, Nichole and Dakota, for putting up with my passion in lichenology, which brought them from southern California to the Traingle of North Carolina. TABLE OF CONTENTS Introduction……………………………………………………………………………………….4 Chapter I: The North Carolina Lichen Checklist…………………………………………………7 Chapter II: Herbarium Surveys and Initiation of a New Lichen Collection in the University of North Carolina Herbarium (NCU)………………………………………………………..9 Chapter III: Preparatory Field Surveys I: Battle Park and Rock Cliff Farm……………………13 Chapter IV: Preparatory Field Surveys II: State Park Forays…………………………………..17 Chapter V: Lichen Biota of Mason Farm Biological Reserve………………………………….19 Chapter VI: Additional Piedmont Lichen Surveys: Uwharrie Mountains…………………...…22 Chapter VII: A Revised Lichen Inventory of North Carolina Piedmont …..…………………...23 Acknowledgements……………………………………………………………………………..72 Appendices………………………………………………………………………………….…..73 Perlmutter – Piedmont Lichen Inventory Page 4 INTRODUCTION Lichens are composite organisms, consisting of a fungus (the mycobiont) and a photosynthesising alga and/or cyanobacterium (the photobiont), which together make a life form that is distinct from either partner in isolation (Brodo et al. -
Opuscula Philolichenum, 11: 120-XXXX
Opuscula Philolichenum, 13: 102-121. 2014. *pdf effectively published online 15September2014 via (http://sweetgum.nybg.org/philolichenum/) Lichens and lichenicolous fungi of Grasslands National Park (Saskatchewan, Canada) 1 COLIN E. FREEBURY ABSTRACT. – A total of 194 lichens and 23 lichenicolous fungi are reported. New for North America: Rinodina venostana and Tremella christiansenii. New for Canada and Saskatchewan: Acarospora rosulata, Caloplaca decipiens, C. lignicola, C. pratensis, Candelariella aggregata, C. antennaria, Cercidospora lobothalliae, Endocarpon loscosii, Endococcus oreinae, Fulgensia subbracteata, Heteroplacidium zamenhofianum, Lichenoconium lichenicola, Placidium californicum, Polysporina pusilla, Rhizocarpon renneri, Rinodina juniperina, R. lobulata, R. luridata, R. parasitica, R. straussii, Stigmidium squamariae, Verrucaria bernaicensis, V. fusca, V. inficiens, V. othmarii, V. sphaerospora and Xanthoparmelia camtschadalis. New for Saskatchewan alone: Acarospora stapfiana, Arthonia glebosa, A. epiphyscia, A. molendoi, Blennothallia crispa, Caloplaca arenaria, C. chrysophthalma, C. citrina, C. grimmiae, C. microphyllina, Candelariella efflorescens, C. rosulans, Diplotomma venustum, Heteroplacidium compactum, Intralichen christiansenii, Lecanora valesiaca, Lecidea atrobrunnea, Lecidella wulfenii, Lichenodiplis lecanorae, Lichenostigma cosmopolites, Lobothallia praeradiosa, Micarea incrassata, M. misella, Physcia alnophila, P. dimidiata, Physciella chloantha, Polycoccum clauzadei, Polysporina subfuscescens, P. urceolata, -
Bulletin of the California Lichen Society (ISSN 1093-9148) Is Edited by Darrell Wright, with a Review Committee Including Larry St
Bulletin of the California Lichen Society Volume 7 No. 1 Summer 2000 The California Lichen Society seeks to promote the appreciation, conservation, and study of the lichens. The interests of the Society include the entire western part of the continent, although the focus is on Califor- nia. Dues caregories (in $ U.S. per year) are: Student/fi xed income - $10, Regular - $18 ($20 for foreign subscribers), Family - $25, Sponsor/Libraries - $35, Donor - $50, Benefactor - $100, and Life Membership - $500 (one time) payable to the California Lichen Society, 362 Scenic Ave., Santa Rosa, CA 95407. Members receive the Bulletin and notices of meetings, fi eld trips, lectures, and workshops. Board Members of the California Lichen Society: President: Judy Robertson Vice President: Bill Hill Secretary: Debra Gillespie Treasurer: Greg Jirak Member at Large: Janet Doell Committees of the California Lichen Society: Computer/Data Base Committee: Charis Bratt, chairperson Conservation Committee: Charis Bratt and David Magney, co-chairpersons Education/Outreach Committee: Greg Jirak, chairperson Poster Committee: Janet Doell and Debbie Gillespie, co-chairpersons The Bulletin of the California Lichen Society (ISSN 1093-9148) is edited by Darrell Wright, with a review committee including Larry St. Clair, Shirley Tucker, William Sanders and Richard Moe, and is produced by Richard Doell. The Bulletin welcomes manuscripts on technical topics in lichenology relating to Western North America and on the conservation of the lichens, as well as news of lichenologists and their activities. Manuscripts may be submitted to Darrell Wright, Bulletin of the California Lichen Society, 4517 Valley West Blvd. #C, Arcata, CA 95521. The best way to submit manuscripts apart from short articles and announce- ments is by e-mail or on diskette in WordPerfect or Microsoft Word formats: ASCII format is a very good alternative. -
Contrasting Patterns in Lichen Diversity in the Continental and Maritime Antarctic
Accepted Manuscript Contrasting patterns in lichen diversity in the continental and maritime Antarctic Shiv Mohan Singh, Maria Olech, Nicoletta Cannone, Peter Convey PII: S1873-9652(15)30004-9 DOI: 10.1016/j.polar.2015.07.001 Reference: POLAR 246 To appear in: Polar Science Received Date: 3 January 2015 Revised Date: 13 April 2015 Accepted Date: 22 July 2015 Please cite this article as: Singh, S.M., Olech, M., Cannone, N., Convey, P., Contrasting patterns in lichen diversity in the continental and maritime Antarctic, Polar Science (2015), doi: 10.1016/ j.polar.2015.07.001. This is a PDF file of an unedited manuscript that has been accepted for publication. As a service to our customers we are providing this early version of the manuscript. The manuscript will undergo copyediting, typesetting, and review of the resulting proof before it is published in its final form. Please note that during the production process errors may be discovered which could affect the content, and all legal disclaimers that apply to the journal pertain. ACCEPTED MANUSCRIPT 1 Contrasting patterns in lichen diversity in the continental and maritime Antarctic 2 3 Shiv Mohan Singh a* , Maria Olech b, Nicoletta Cannone c, Peter Convey d 4 5 aNational Centre for Antarctic and Ocean Research, Ministry of Earth Sciences, 6 Vasco-Da-Gama, Goa 403804, India 7 8 bInstitute of Botany, Jagiellonian University, Kopernica 27, 31-501Cracow, Poland 9 10 cDepartment of Theoretical and Applied Sciences, Insubria University, via Valleggio, 11 11 – 22100 – Como (CO) -Italy 12 13 dBritish Antarctic Survey, Madingley Road, High Cross Cambridge CB3 0ET United 14 Kingdom 15 16 17 *For correspondence: [email protected] 18 19 20 Abstract 21 Systematic surveys of the lichen floras of MANUSCRIPTSchirmacher Oasis (Queen Maud Land, 22 continental Antarctic), Victoria Land (Ross Sector, continental Antarctic) and 23 Admiralty Bay (South Shetland Islands, maritime Antarctic) were compared to help 24 infer the major factors influencing patterns of diversity and biogeography in the three 25 areas. -
Myconet Volume 14 Part One. Outine of Ascomycota – 2009 Part Two
(topsheet) Myconet Volume 14 Part One. Outine of Ascomycota – 2009 Part Two. Notes on ascomycete systematics. Nos. 4751 – 5113. Fieldiana, Botany H. Thorsten Lumbsch Dept. of Botany Field Museum 1400 S. Lake Shore Dr. Chicago, IL 60605 (312) 665-7881 fax: 312-665-7158 e-mail: [email protected] Sabine M. Huhndorf Dept. of Botany Field Museum 1400 S. Lake Shore Dr. Chicago, IL 60605 (312) 665-7855 fax: 312-665-7158 e-mail: [email protected] 1 (cover page) FIELDIANA Botany NEW SERIES NO 00 Myconet Volume 14 Part One. Outine of Ascomycota – 2009 Part Two. Notes on ascomycete systematics. Nos. 4751 – 5113 H. Thorsten Lumbsch Sabine M. Huhndorf [Date] Publication 0000 PUBLISHED BY THE FIELD MUSEUM OF NATURAL HISTORY 2 Table of Contents Abstract Part One. Outline of Ascomycota - 2009 Introduction Literature Cited Index to Ascomycota Subphylum Taphrinomycotina Class Neolectomycetes Class Pneumocystidomycetes Class Schizosaccharomycetes Class Taphrinomycetes Subphylum Saccharomycotina Class Saccharomycetes Subphylum Pezizomycotina Class Arthoniomycetes Class Dothideomycetes Subclass Dothideomycetidae Subclass Pleosporomycetidae Dothideomycetes incertae sedis: orders, families, genera Class Eurotiomycetes Subclass Chaetothyriomycetidae Subclass Eurotiomycetidae Subclass Mycocaliciomycetidae Class Geoglossomycetes Class Laboulbeniomycetes Class Lecanoromycetes Subclass Acarosporomycetidae Subclass Lecanoromycetidae Subclass Ostropomycetidae 3 Lecanoromycetes incertae sedis: orders, genera Class Leotiomycetes Leotiomycetes incertae sedis: families, genera Class Lichinomycetes Class Orbiliomycetes Class Pezizomycetes Class Sordariomycetes Subclass Hypocreomycetidae Subclass Sordariomycetidae Subclass Xylariomycetidae Sordariomycetes incertae sedis: orders, families, genera Pezizomycotina incertae sedis: orders, families Part Two. Notes on ascomycete systematics. Nos. 4751 – 5113 Introduction Literature Cited 4 Abstract Part One presents the current classification that includes all accepted genera and higher taxa above the generic level in the phylum Ascomycota. -
Comparison of Invertebrates and Lichens Between Young and Ancient
Comparison of invertebrates and lichens between young and ancient yew trees Bachelor agro & biotechnology Specialization Green management 3th Internship report / bachelor dissertation Student: Clerckx Jonathan Academic year: 2014-2015 Tutor: Ms. Joos Isabelle Mentor: Ms. Birch Katherine Natural England: Kingley Vale NNR Downs Road PO18 9BN Chichester www.naturalengland.org.uk Comparison of invertebrates and lichens between young and ancient yew trees. Natural England: Kingley Vale NNR Foreword My dissertation project and internship took place in an ancient yew woodland reserve called Kingley Vale National Nature Reserve. Kingley Vale NNR is managed by Natural England. My dissertation deals with the biodiversity in these woodlands. During my stay in England I learned many things about the different aspects of nature conservation in England. First of all I want to thank Katherine Birch (manager of Kingley Vale NNR) for giving guidance through my dissertation project and for creating lots of interesting days during my internship. I want to thank my tutor Isabelle Joos for suggesting Kingley Vale NNR and guiding me during the year. I thank my uncle Guido Bonamie for lending me his microscope and invertebrate books and for helping me with some identifications of invertebrates. I thank Lies Vandercoilden for eliminating my spelling and grammar faults. Thanks to all the people helping with identifications of invertebrates: Guido Bonamie, Jon Webb, Matthew Shepherd, Bryan Goethals. And thanks to the people that reacted on my posts on the Facebook page: Lichens connecting people! I want to thank Catherine Slade and her husband Nigel for being the perfect hosts of my accommodation in England.