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Nuclear and Plastid DNA Phylogeny of the Tribe Cardueae (Compositae
1 Nuclear and plastid DNA phylogeny of the tribe Cardueae 2 (Compositae) with Hyb-Seq data: A new subtribal classification and a 3 temporal framework for the origin of the tribe and the subtribes 4 5 Sonia Herrando-Morairaa,*, Juan Antonio Callejab, Mercè Galbany-Casalsb, Núria Garcia-Jacasa, Jian- 6 Quan Liuc, Javier López-Alvaradob, Jordi López-Pujola, Jennifer R. Mandeld, Noemí Montes-Morenoa, 7 Cristina Roquetb,e, Llorenç Sáezb, Alexander Sennikovf, Alfonso Susannaa, Roser Vilatersanaa 8 9 a Botanic Institute of Barcelona (IBB, CSIC-ICUB), Pg. del Migdia, s.n., 08038 Barcelona, Spain 10 b Systematics and Evolution of Vascular Plants (UAB) – Associated Unit to CSIC, Departament de 11 Biologia Animal, Biologia Vegetal i Ecologia, Facultat de Biociències, Universitat Autònoma de 12 Barcelona, ES-08193 Bellaterra, Spain 13 c Key Laboratory for Bio-Resources and Eco-Environment, College of Life Sciences, Sichuan University, 14 Chengdu, China 15 d Department of Biological Sciences, University of Memphis, Memphis, TN 38152, USA 16 e Univ. Grenoble Alpes, Univ. Savoie Mont Blanc, CNRS, LECA (Laboratoire d’Ecologie Alpine), FR- 17 38000 Grenoble, France 18 f Botanical Museum, Finnish Museum of Natural History, PO Box 7, FI-00014 University of Helsinki, 19 Finland; and Herbarium, Komarov Botanical Institute of Russian Academy of Sciences, Prof. Popov str. 20 2, 197376 St. Petersburg, Russia 21 22 *Corresponding author at: Botanic Institute of Barcelona (IBB, CSIC-ICUB), Pg. del Migdia, s. n., ES- 23 08038 Barcelona, Spain. E-mail address: [email protected] (S. Herrando-Moraira). 24 25 Abstract 26 Classification of the tribe Cardueae in natural subtribes has always been a challenge due to the lack of 27 support of some critical branches in previous phylogenies based on traditional Sanger markers. -
Checklist of the Vascular Plants of San Diego County 5Th Edition
cHeckliSt of tHe vaScUlaR PlaNtS of SaN DieGo coUNty 5th edition Pinus torreyana subsp. torreyana Downingia concolor var. brevior Thermopsis californica var. semota Pogogyne abramsii Hulsea californica Cylindropuntia fosbergii Dudleya brevifolia Chorizanthe orcuttiana Astragalus deanei by Jon P. Rebman and Michael G. Simpson San Diego Natural History Museum and San Diego State University examples of checklist taxa: SPecieS SPecieS iNfRaSPecieS iNfRaSPecieS NaMe aUtHoR RaNk & NaMe aUtHoR Eriodictyon trichocalyx A. Heller var. lanatum (Brand) Jepson {SD 135251} [E. t. subsp. l. (Brand) Munz] Hairy yerba Santa SyNoNyM SyMBol foR NoN-NATIVE, NATURaliZeD PlaNt *Erodium cicutarium (L.) Aiton {SD 122398} red-Stem Filaree/StorkSbill HeRBaRiUM SPeciMeN coMMoN DocUMeNTATION NaMe SyMBol foR PlaNt Not liSteD iN THE JEPSON MANUAL †Rhus aromatica Aiton var. simplicifolia (Greene) Conquist {SD 118139} Single-leaF SkunkbruSH SyMBol foR StRict eNDeMic TO SaN DieGo coUNty §§Dudleya brevifolia (Moran) Moran {SD 130030} SHort-leaF dudleya [D. blochmaniae (Eastw.) Moran subsp. brevifolia Moran] 1B.1 S1.1 G2t1 ce SyMBol foR NeaR eNDeMic TO SaN DieGo coUNty §Nolina interrata Gentry {SD 79876} deHeSa nolina 1B.1 S2 G2 ce eNviRoNMeNTAL liStiNG SyMBol foR MiSiDeNtifieD PlaNt, Not occURRiNG iN coUNty (Note: this symbol used in appendix 1 only.) ?Cirsium brevistylum Cronq. indian tHiStle i checklist of the vascular plants of san Diego county 5th edition by Jon p. rebman and Michael g. simpson san Diego natural history Museum and san Diego state university publication of: san Diego natural history Museum san Diego, california ii Copyright © 2014 by Jon P. Rebman and Michael G. Simpson Fifth edition 2014. isBn 0-918969-08-5 Copyright © 2006 by Jon P. -
New Xenophytes from La Palma (Canary Islands, Spain), with Emphasis on Naturalized and (Potentially) Invasive Species – Part 3 R
Collectanea Botanica 39: e002 enero-diciembre 2020 ISSN-L: 0010-0730 https://doi.org/10.3989/collectbot.2020.v39.002 New xenophytes from La Palma (Canary Islands, Spain), with emphasis on naturalized and (potentially) invasive species – Part 3 R. OTTO1 & F. VERLOOVE2 1 Lindenstraße, 2, D-96163 Gundelsheim, Germany 2 Botanic Garden Meise, Nieuwelaan, 38, B-1860 Meise, Belgium ORCID iD. R. OTTO: https://orcid.org/0000-0002-2498-7677, F. VERLOOVE: https://orcid.org/0000-0003-4144-2422 Author for correspondence: R. Otto ([email protected]) Editor: N. Ibáñez Received 22 February 2019; accepted 12 September 2019; published on line 14 April 2020 Abstract NEW XENOPHYTES FROM LA PALMA (CANARY ISLANDS, SPAIN), WITH EMPHASIS ON NATURALIZED AND (POTENTIALLY) INVASIVE SPE- CIES. PART 3.— Several months of field work in La Palma (western Canary Islands) yielded a number of interesting new records of non-native vascular plants. Alstroemeria aurea, A. ligtu, Anacyclus radiatus subsp. radiatus, Chenopodium album subsp. borbasii, Cotyledon orbiculata, Cucurbita ficifolia, Cynodon nlemfuensis, Datura stramonium subsp. tatula, Digitaria ciliaris var. rhachiseta, D. ischaemum, Diplotaxis tenuifolia, Egeria densa, Eugenia uniflora, Galinsoga quadri- radiata, Glebionis segetum, Kalanchoe laetivirens, Lemna minuta, Ligustrum lucidum, Lotus broussonetii, Oenothera fal- lax, Paspalum notatum, Passiflora caerulea, P. manicata × tarminiana, P. tarminiana, Pelargonium capitatum, Phaseolus lunatus, Portulaca trituberculata, Pyracantha angustifolia, Sedum mexicanum, Trifolium lappaceum, Urochloa mutica, U. subquadripara and Volutaria tubuliflora are naturalized or (potentially) invasive xenophytes or of special floristic in- terest, reported for the first time from either theCanary Islands or La Palma. Three additional, presumably ephemeral taxa are reported for the first time from the Canary Islands, whereas seven ephemeral taxa are new for La Palma. -
Redalyc.Diversity, Rarity and the Evolution and Conservation of The
Anales del Jardín Botánico de Madrid ISSN: 0211-1322 [email protected] Consejo Superior de Investigaciones Científicas España Reyes-Betancort, J. Alfredo; Santos Guerra, Arnoldo; Guma, I. Rosana; Humphries, Christopher J.; Carine, Mark A. Diversity, rarity and the evolution and conservation of the Canary Islands endemic flora Anales del Jardín Botánico de Madrid, vol. 65, núm. 1, enero-junio, 2008, pp. 25-45 Consejo Superior de Investigaciones Científicas Madrid, España Available in: http://www.redalyc.org/articulo.oa?id=55665102 How to cite Complete issue Scientific Information System More information about this article Network of Scientific Journals from Latin America, the Caribbean, Spain and Portugal Journal's homepage in redalyc.org Non-profit academic project, developed under the open access initiative Anales del Jardín Botánico de Madrid Vol. 65(1): 25-45 enero-junio 2008 ISSN: 0211-1322 Diversity, rarity and the evolution and conservation of the Canary Islands endemic flora by J. Alfredo Reyes-Betancort1, Arnoldo Santos Guerra1, I. Rosana Guma1, Christopher J. Humphries2 & Mark A. Carine2,3 1 Unidad de Botánica Aplicada, Instituto Canario de Investigaciones Agrarias, Jardín de Aclimatación de La Orotava, c/ Retama n.º 2, 38400 Puerto de La Cruz, Santa Cruz de Tenerife, Spain 2 Department of Botany, The Natural History Museum, Cromwell Road, London SW7 5BD, United Kingdom 3Author for correspondence: [email protected] Abstract Resumen Reyes-Betancort, J.A., Santos Guerra, A., Guma, I.R., Humphries, Reyes-Betancort, J.A., Santos Guerra, A., Guma, R., Humphries, C.J. & Carine, M.A. 2008. Diversity, rarity and the evolution and C.J. -
Prioritizing Weed Targets for Biological Control in the Western
HEALTH & BIOSECURITY Prioritizing Weed Targets for Biological Control in the Western USA Report on Workshop 1 (Weed Impacts & Desired Management Goals) Report on Workshop 2 (Feasibility & Likelihood of Biological Control) S. Raghu and Louise Morin May 2017 Client: USDA‐ARS Western Regional Research Center Client Contact: Dr Paul Pratt (Exotic & Invasive Weeds Research Unit) Prioritizing Weed Targets for Biological Control in the Western USA | i Sources of photos on cover page Dan Tenaglia (http://www.missouriplants.com); Colorado State University; La Plata Co (Colorado); SEINet (http://swbiodiversity.org/seinet/index.php); North Carolina State University; Washington State Noxious Weed Control Board; Wikimedia Commons Citation Raghu, S and Morin, L (2018) Prioritising Weed Targets for Biological Control in the Western USA. CSIRO, Australia. Copyright © Commonwealth Scientific and Industrial Research Organisation 2018. To the extent permitted by law, all rights are reserved and no part of this publication covered by copyright may be reproduced or copied in any form or by any means except with the written permission of CSIRO. Important disclaimer CSIRO advises that the information contained in this publication comprises general statements based on scientific research. The reader is advised and needs to be aware that such information may be incomplete or unable to be used in any specific situation. No reliance or actions must therefore be made on that information without seeking prior expert professional, scientific and technical advice. To the extent permitted by law, CSIRO (including its employees and consultants) excludes all liability to any person for any consequences, including but not limited to all losses, damages, costs, expenses and any other compensation, arising directly or indirectly from using this publication (in part or in whole) and any information or material contained in it. -
Review Synopsis of the Family Asteraceae in Egypt
INTERNATIONAL JOURNAL OF AGRICULTURE & BIOLOGY 1560–8530/2005/07–5–832–844 http://www.ijab.org Review Synopsis of the Family Asteraceae in Egypt M.M. ZAREH Botany Department, Faculty of Science, Assiut University, Assiut, Egypt E-mail: [email protected] ABSTRACT A total of 97 genera comprising 230 species are reported. Achillea biebersteinii Afan., Carduus acanthoides L., Atractylis humilis L., Atractylis serrata Pomel and Atractylis phaeolepis Pomel are new records to the flora of Egypt. An original Key to the genera, species and infraspecific taxa, synonymy are also provided and 3 species are belived to be endemic. Key Words: Plant systematic; Flora; Compositae; Egypt INTRODUCTION (1974) and Boulos (1995 & 2002) are known to the author no specimens have been seen by the author and the The family Asteraceae (Compositae) is one of the occurrence of these taxa in Egypt is therefore doubtful. largest families of flowering plants with about 1100 The study is based on collections kept in CAI; CAIM; currently accepted genera and 25000 species (Heywood, CAIRC, E and ASTUH (Assiut University herbarium, 1977). It is of worldwide distribution particularly in proposed acronym), in addition to intesive field semiarid region of the tropics and subtropics. The most observations. This study aims to provide a revised list as members are evergreen shrubs or subshrubs or perennial well as an original identification key to distinguish between rhizomatous herbs; biennial and annual herbs are also the different taxa of the Compositae of Egypt. The accepted frequent. It is generally accepted that Compositae are a taxa are arranged more or less as same as Täckholm, (1974). -
Asteraceae) Based on Analysis of Morpho Logical and Palynological Characters
D. Petit, J. Mathez & tA. Qaid Phylogeny of the Cardueae (Asteraceae) based on analysis of morpho logical and palynological characters Abstract Petit, D. , Mathez, l , & tQaid, A.: Phylogeny of the Cardueae (Asteraceae) based on analysis of morphological and palynological characters. - Bocconea 13: 41·53. 2001. - ISSN 1120- 4060. Between 1955 and 1977, the main contributions to the systematics ofthe Cardueae were made by Wagenitz (pollen: 1955), Dittrich (histology of cypselas: 1966, 1968a, 1968b, 1969, 1977, 1984) and Meusel & Kohler (growthforrn: 1960). Since 1980, new approaches have provided an impetus to a new look at the group. Different authors used cladistic methods to analyse morphological, paJynological and molecular charac ters [Bremer (1994), Susanna & al. (1995), Petit (1997) and Petit & al. (1996)]. We here present results of a cladistic analysis based on two characters sets, one morphological (33 characters), the other palynological (41 characters), of 34 taxa close to Centaurea. The morphological characters come mostly from previous published studies, whereas the palyno logical ones, defined in a previous work, are applied to the Centaureinae for the first time. Special emphasis is placed on the Carthamus complex. Several approaches were investigated: two outgroups (Jurinea and Saussurea) and, with respect to the pollen analysis, different qual· itative and quantitative character codings. The very high sensibility of obtained topologies when the data sets are considered alone or together is remarkable. We interpret the lack of robustness of relationships between clades by the probable "burst" nature of evolution in this group; the origin of the group is doubtless in the Mediterranean region. This "star-like" phylogeny, the probable result of ecological factors, has yet to be explored. -
Introduction
Introduction Egypt has attracted the attention of the explorers of natural history due to its unique position midway between Africa and Asia, with its long coasts of the Mediterranean Sea in the north (c. 970 km) and the Red Sea in the east (c. 1100 km). It is connected to the Mediterranean and sub-Saharan Africa by way of the Nile Valley, and to the tropical Indian Ocean through the Red Sea. It has diverse habitats with micro-climates that host many plant species and communities. Terrestrial and aquatic habitats include desert areas, mountains, plains, slopes, sand formations, salt marshes, wetlands including sea coasts, fresh and marine waters, as well as urban habitats particularly in the Nile region are the major habitat types in Egypt. Egyptian biota face threats by a combination of factors such as: over-collection, unsustainable agriculture practices, urbanization, pollution, land use changes, the spread of invasive species and climate change which often leads to decline and extinction in its biodiversity. This is due to other factors such as increasing population growth, high rates of habitat destruction, modification and deforestation, overexploitation, spread of invasive species, pollution and threats of climate change (Shaltout and Eid 2016). Because of the barren nature of so much of Egypt, plants and animals tend to be high in localized area, while remaining low for the region or country as a whole. This report is one of the requirements for producing the Sixth National Report which will be presented to the 14th Conference of Parties (Convention on Biological Diversity - Cop-14), which will be held in Sharm El-Sheikh (November 2018). -
Leuzea Repens, a New Combination (Compositae: Cardueae: Centaureinae)
KEW BULLETIN (2019) 74: 20 ISSN: 0075-5974 (print) DOI 10.1007/S12225-019-9809-2 ISSN: 1874-933X (electronic) Leuzea repens, a new combination (Compositae: Cardueae: Centaureinae) D. J. Nicholas Hind1 Summary. The taxonomic concepts and nomenclatural issues surrounding a group of taxa, often placed into ‘Rhaponticum Vaill.’ sensu auct. mult., are discussed. Taxonomically, taxa belonging to Acroptilon, Leuzea, Stemmac- antha and ‘Rhaponticum Vaill.’, are now considered congeneric. ‘Rhaponticum Vaill.’ is not considered a validly published generic name and taxa are now recognised under the generic name Leuzea, which has priority. The taxonomic position of Acroptilon repens (Compositae: Cardueae: Centaureinae), the only representative of the genus in Iraq, has been reviewed and a new combination in Leuzea is provided, together with an exhaustive synonymy of the taxon concerned. Key Words. Asteraceae, Chewing Disease, Flora of Iraq. Introduction the synonymy of the latter; two literature references During the initial editing of the draft Flora of Iraq were provided, the first to Holub (1973) and, the Compositae account, written by several authors some second, to Dittrich (1984). 35 or more years ago, the present author was faced Holub (1973) had long-recognised that within the with updating much taxonomy and sorting out many Centaureinae there were taxonomic issues with both nomenclatural issues with the various scripts. One of Rhaponticum sensu auct. and Leuzea, and that the work these concerned Francis Davies’s original draft ac- of Soskov (1959) and Dittrich (1968a, b) had scarcely countofthegenusAcroptilon Cass. (Compositae: resolved them, together with the clear nomenclatural Cardueae: Centaureinae), and the sole species in the issues that still existed. -
Nuclear and Plastid DNA Phylogeny of Tribe Cardueae (Compositae)
1 Nuclear and plastid DNA phylogeny of tribe Cardueae (Compositae) 2 with Hyb-Seq data: A new subtribal classification and a temporal 3 diversification framework 4 5 6 7 Sonia Herrando-Morairaa,*, Juan Antonio Callejab, Mercè Galbany-Casalsb, Núria Garcia-Jacasa, Jian-Quan 8 Liuc, Javier López-Alvaradob, Jordi López-Pujola, Jennifer R. Mandeld, Sergi Massóa,b, Noemí Montes- 9 Morenoa, Cristina Roquetb,e, Llorenç Sáezb, Alexander Sennikovf, Alfonso Susannaa, Roser Vilatersanaa 10 11 a Botanic Institute of Barcelona (IBB, CSIC-ICUB), Pg. del Migdia, s.n., ES-08038 Barcelona, Spain 12 b Systematics and Evolution of Vascular Plants (UAB) – Associated Unit to CSIC, Departament de Biologia 13 Animal, Biologia Vegetal i Ecologia, Facultat de Biociències, Universitat Autònoma de Barcelona, ES- 14 08193 Bellaterra, Spain 15 c Key Laboratory for Bio-Resources and Eco-Environment, College of Life Sciences, Sichuan University, 16 Chengdu, China 17 d Department of Biological Sciences, University of Memphis, Memphis, TN 38152, USA 18 e Univ. Grenoble Alpes, Univ. Savoie Mont Blanc, CNRS, LECA (Laboratoire d’Ecologie Alpine), FR- 19 38000 Grenoble, France 20 f Botanical Museum, Finnish Museum of Natural History, PO Box 7, FI-00014 University of Helsinki, 21 Finland; and Herbarium, Komarov Botanical Institute of Russian Academy of Sciences, Prof. Popov str. 2, 22 197376 St. Petersburg, Russia 23 24 *Corresponding author at: Botanic Institute of Barcelona (IBB, CSIC-ICUB), Pg. del Migdia, s. n., ES- 25 08038 Barcelona, Spain. E-mail address: [email protected] (S. Herrando-Moraira). 26 27 Abstract 28 Classification of tribe Cardueae in natural subtribes has always been a challenge due to the lack of support 29 of some critical branches in previous phylogenies based on traditional Sanger markers. -
Notes on Systematics and Taxonomy for the Italian Vascular Flora. 2
Atti Soc. it. Sci. nat. Museo civ. Stor. nat. Milano, 152 (II): 85-106, Novembre 2011 Enrico Banfi*, Gabriele Galasso* & Adriano Soldano** Notes on systematics and taxonomy for the Italian vascular flora. 2. Abstract - The present study forms part of the series of systematic and taxonomic contributions related to plant species of the Italian flora, and also other phanerogams, in light of recent biosystematic works of a molecular-genetic nature. Caloscordum and Nectaroscordum are separated from Allium s.l., Holandrea is included within Dichoropetalum, Ficaria is separated from Ranunculus and Althaea sect. Hirsutae is included within Malva. Confirmation is given for the inclusion of Lavatera within Malva, of Aegilops within Triticum and for the separation of Phelipanche from Orobanche. In addition some observations regarding the genera Cytisus, Hippophaë, Portulaca, Rhaponticum, Senecio and Torilis are presented. Finally new combinations and/or new names are proposed within the genera Caloscordum, Necta- roscordum, Dichoropetalum, Ficaria, Hippophaë, Malva, Portulaca and Rhaponticum. Key words: Italian vascular flora, systematics, taxonomy, nomenclature. Riassunto - Appunti di sistematica e tassonomia per la flora italiana. 2. Continua la serie di contributi sistematici e tassonomici relativi a entità della flora italiana, ma anche ad altre fanerogame, predisposti alla luce di recenti lavori di biosistematica su base genetico- molecolare. Da Allium s.l. vengono separati Caloscordum e Nectaroscordum, Holandrea è unito a Dichoro- petalum, Ficaria è separato da Ranunculus e Althaea sect. Hirsutae è unita a Malva. Viene ribadita la riunione di Lavatera a Malva, di Aegilops a Triticum e la separazione di Phelipanche da Orobanche. Inoltre vengono fatte alcune considerazioni sui generi Cytisus, Hippophaë, Portulaca, Rhaponticum, Senecio e Torilis. -
Nuclear DNA Amounts in Angiosperms: Targets, Trends and Tomorrow
Annals of Botany Page 1 of 124 doi:10.1093/aob/mcq258, available online at www.aob.oxfordjournals.org Nuclear DNA amounts in angiosperms: targets, trends and tomorrow M. D. Bennett* and I. J. Leitch Jodrell Laboratory, Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3AB, UK * For correspondence. E-mail: [email protected] Received: 25 August 2010 Returned for revision: 18 October 2010 Accepted: 24 November 2010 CONTENTS INTRODUCTION 2 Extending the range of genome sizes encountered in angiosperms 3 The need for reference lists 4 TARGETS IN GENOME SIZE RESEARCH 4 Downloaded from Meeting targets for species representation 4 Progress towards targets for familial representation 5 Improved systematic representation for genera 6 Improved representation of other groups 6 TRENDS IN TECHNIQUES USED TO ESTIMATE GENOME SIZE 7 The rise in flow cytometry as the technique of choice for genome size estimations 7 http://aob.oxfordjournals.org/ Development of different isolation buffers for flow cytometry 7 The application of flow cytometry to plant systematics 8 Recent developments in the application of flow cytometry to genome size studies 8 (i) The use of seeds 8 (ii) Ease of access to methodological data 8 (iii) New equipment 8 Are there any new techniques for estimating genome size on the horizon? 9 (i) Can real time PCR be used for estimating plant genome sizes? 9 (ii) Will ‘complete’ genome sequencing give useable genome size estimates? 9 TOMORROW 13 at NIH Library on December 30, 2015 Uncovering and collating genome size data from diverse published sources 14 Screening ex situ and in situ collections as sources of target taxa 15 DEDICATION 15 LITERATURE CITED 16 APPENDIX 19 Notes to the Appendix 19 Original references for DNA values 121 † Background and Aims The amount of DNA in an unreplicated gametic chromosome complement is known as the C-value and is a key biodiversity character of fundamental significance with many practical and predictive uses.