Systems Biology Analysis of Longitudinal Functional Response of Endothelial Cells to Shear Stress
Systems biology analysis of longitudinal functional response of endothelial cells to shear stress Nassim E. Ajamia, Shakti Guptab,c, Mano R. Mauryab,c, Phu Nguyenb,d, Julie Yi-Shuan Lib,d, John Y.-J. Shyye,1, Zhen Chene,f,1, Shu Chienb,d,e,1, and Shankar Subramaniama,b,d,g,h,1 aBioinformatics and Systems Biology Graduate Program, University of California at San Diego, La Jolla, CA 92023; bDepartment of Bioengineering, University of California at San Diego, La Jolla, CA 92093; cSan Diego Supercomputer Center, University of California at San Diego, La Jolla, CA 92093; dInstitute of Engineering in Medicine, University of California, San Diego, La Jolla, CA 92093; eDepartment of Medicine, University of California at San Diego, La Jolla, CA 92093; fDepartment of Diabetes Complications and Metabolism, Beckman Research Institute, City of Hope, CA 91010; gDepartment of Computer Science and Engineering, University of California, San Diego, La Jolla, CA 92093; and hDepartment of Cellular and Molecular Medicine, University of California, San Diego, La Jolla, CA 92093 Contributed by Shu Chien, August 25, 2017 (sent for review May 8, 2017; reviewed by Michael A. Gimbrone, Jie Liang, and Jason A. Papin) Blood flow and vascular shear stress patterns play a significant role pulsatile flow, disturbed flow impairs endothelial homeostasis in inducing and modulating physiological responses of endothelial through three major processes: (i) It induces higher levels of re- cells (ECs). Pulsatile shear (PS) is associated with an atheroprotective active oxygen species (ROS) via the up-regulation of NADPH endothelial phenotype, while oscillatory shear (OS) is associated oxidase (NOX) and dysfunction of mitochondrial respiration chain with an atheroprone endothelial phenotype.
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