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Genome Skimming Provides Well Resolved Plastid and Nuclear
Australian Systematic Botany, 2019, 32, 243–254 ©CSIRO 2019 https://doi.org/10.1071/SB18057 Supplementary material Genome skimming provides well resolved plastid and nuclear phylogenies, showing patterns of deep reticulate evolution in the tropical carnivorous plant genus Nepenthes (Caryophyllales) Lars NauheimerA,B,C,G, Lujing CuiD,E, Charles ClarkeA, Darren M. CraynA,B,C,D, Greg BourkeF and Katharina NargarA,B,C,D AAustralian Tropical Herbarium, James Cook University, PO Box 6811, Cairns, Qld 4878, Australia. BCentre for Tropical Environmental Sustainability Science, James Cook University, McGregor Road, Smithfield, Qld 4878, Australia. CCentre for Tropical Bioinformatics and Molecular Biology, James Cook University, McGregor Road, Smithfield, Qld 4878, Australia. DNational Research Collections Australia, Commonwealth Industrial and Scientific Research Organisation (CSIRO), GPO Box 1700, Canberra, ACT 2601, Australia. ESchool of Computer Science and Engineering, University of New South Wales, NSW 2052, Australia. FBlue Mountains Botanic Garden, Bells Line of Road, Mount Tomah, NSW 2758, Australia. GCorresponding author. Email: [email protected] Page 1 of 6 Australian Systematic Botany ©CSIRO 2019 https://doi.org/10.1071/SB18057 Table S1. List of accessions used for phylogenetic analyses with sectional association, voucher number, geographic origin and DNA number All herbarium vouchers are located in the Australian Tropical Herbarium in Cairns (CNS) Species Section Voucher Origin DNA number Nepenthes ampullaria Jack Urceolatae Clarke, C. & Bourke, G. 2 Borneo, Malaysia G07903 Nepenthes benstonei C.Clarke Pyrophytae Clarke, C. & Bourke, G. 38 Malay Peninsula, Malaysia G07897 Nepenthes bokorensis Mey × Nepenthes ventricosa Blanco Pyrophytae × Insignes Clarke, C. & Bourke, G. 54 Horticulatural G07899 Nepenthes bongso Korth. Montanae Clarke, C. -
Heart of Borneo HEART of BORNEO EXPEDITION ITINERARY Day 1: Meet in Kota Kinabalu, Sabah, Malaysian Borneo
Heart of Borneo HEART OF BORNEO EXPEDITION ITINERARY Day 1: Meet in Kota Kinabalu, Sabah, Malaysian Borneo. Overnight in a hotel and expedition brief at Malaysian Borneo dinner in a local restaurant. An expedition to see pitcher plants, orchids, orangutans, proboscis monkeys, caves & pinnacles Day 2: Early flight to Tawau, Overland transfer in 4×4 to the Maliau Basin (approximately 5-6 hours). Arrive at Agathis Camp in the afternoon. Explore Agathis Camp nature trail. After dinner (if weather permits) we go for a night safari in search of nocturnal animals (past groups have seen elephants, barking This intrepid jungle adventure takes you well off the tourist trail to Borneo’s ‘lost world’ – the Maliau deer, mouse deer and clouded leopards). Basin, a seldom visited, massive crater-like refuge that harbours one of Borneo’s last great tracts of pristine Day 3: After a hearty breakfast, we start a 7km trek through the rainforest to Camel Trophy Camp wilderness that is home to Bornean elephants, rhinos, clouded leopards, barking deer, mouse deer, gigantic (approximately 6 hours). This is the hardest day of trekking in Maliau. Along the way, we pass through trees, enormous waterfalls, pristine cloud forest, a plethora of orchid species, spectacular carnivorous pitcher lush forest that is home to ferns, orchids and pitcher plants. After arriving at camp, we have the option of plants (tree-hugging, climbing Nepenthes veitchii, as well as N. ampullaria, N. hirsuta, N. reinwardtiana and trekking to see two beautiful waterfalls: Giluk Falls and the spectacular Takob Akob Falls (in which we N. stenophylla), a rare species of Rafflesia and some of the most spectacular scenery Borneo has to offer. -
Availability List
PO Box 2 Thalawathugoda Sri Lanka tel: +94 71 8733 260 / +94 71 8733 262 [email protected] Availability List 10 Feb 2016 Updated Time : 08:28 PM How to Use this List This list shows what varieties are currently available and at which sizes. It’s linked real-time to our database and is updated very frequently. If an item is listed here, it’s available for our Distributors to order but they may not necessarily have that item in stock right now. If you see something you’re interested in purchasing through your favoured Distributor, you can ask them to obtain it for you. Price Categories The price categories are broadly as follows: A = inexpensive items, usually in good supply and also easy to grow. B = medium priced items, either quite rare and new or sometimes less easy to grow/produce. C = high prices items, usually new introductions currently in very short supply, and/or difficult to grow/produce. The actual prices charged by individual Distributors are likely to follow the general categories above but they are not bound by any obligations on pricing and if you wish to judge whether the price charged by a Distributor for a particular item is fair, the best way may be to compare prices between them. In countries with several Distributors, they are in competition with one another. It’s worth bearing in mind that price may not be the only factor to consider in choosing which Distributor to order from. Each Distributor receives exactly the same standard of produce from us but their costs of sale may vary a great deal depending upon how they handle the plants after receiving them. -
Of Halmahera, Indonesia
Blumea 59, 2015: 215–225 www.ingentaconnect.com/content/nhn/blumea RESEARCH ARTICLE http://dx.doi.org/10.3767/000651915X689091 Nepenthes (Nepenthaceae) of Halmahera, Indonesia M. Cheek1 Key words Abstract Two new paniculate species of Nepenthes, N. halmahera and N. weda, both allied to N. danseri Jebb & Cheek, are described respectively from lowland and lower montane forest on ultramafic substrate. Nepenthes weda character state appears to be unique in the genus due to the adaxial tepal surfaces which in the distal portion are hairy and lack critically endangered nectar glands. This species is also unique among paniculate members of the genus in its forward-facing, concave mining subapical lid appendage. Both species are currently only known from the Weda Bay Nickel Project concession area ultramafic in Halmahera, Indonesia, and are assessed as Critically Endangered using the 2012 IUCN standard. Two character Weda Bay Nickel Project states are formally described and named for the first time in Nepenthes: nanophyll rosettes and multiseriate fringed pitcher wings. Stage-related heteromorphy in lid appendages is documented for the first time in the genus. Keys to the species of Nepenthes of Halmahera, and to the paniculate species of SE Asia are presented. Published on 13 August 2015 INTRODUCTION the basal grade of the genus, in the west (Jebb & Cheek 1997, Mullins & Jebb 2009). Halmahera, is the largest island in Indonesia’s Maluku Province Until 1997, just two species were known from Maluku, Nepen- (formerly Moluccas) after Seram. The islands of Maluku are thes mirabilis (Lour.) Druce the most globally widespread spe- situated between Sulawesi (formerly Celebes) to the west, and cies (from Indo-China to N Australia), and N. -
Pricelist March 2019
PRICELIST MARCH 2019 About us. Passionate about carnivorous plants from a young age, Scotland Carnivorous Plants was established in 2014 by myself, Oliver Murray. At Scotland Carnivorous Plants we specialise in the sale of the highest quality potted nepenthes. We strive for excellence and precision in every detail from plant health to customer service and packaging. We are one of the largest Borneo Exotics distributors in Europe, Importing since 2015. Please share my passion for nepenthes with me and do not hesitate to contact me, I am always willing to chat anything carnivorous plants! Please have a look at the reviews on our eBay page, we are sure you will not be disappointed. Ordering from us Here are some quick details about ordering from us… o All plants are sent potted unless otherwise stated. o Plants are wrapped in the highest quality materials protected for winter, with thermally insulated packaging - heatpacks available. o All plants are sent with appropriate plant passport documentation. o Guaranteed safe arrival and the highest quality. (Europe only!). o Please contact us, to place your order. o Photos of plants provided on request. o TRADES welcome: I am always happy to trade, contact me. o Photos on this pricelist are largely supplied from Borneo exotics and give an indication of what plants will grow to look like. o Pre-orders, we offer plants due to arrive in out next shipment (end of April/early May), these can be sent to you the day we receive them, or we can acclimate free of charge. o Payment is with PayPal (3.5% of total bill service charge). -
Effects of Poaching, Habitat Destruction, and Climate Change on Nepenthes
Effects of Poaching, Habitat Destruction, and Climate Change On Nepenthes Lucas Barron 4/27/19 Effects of Poaching, Habitat Destruction, and Climate Change On Nepenthes Lucas Barron; 4/27/2018 1 Effects of Poaching, Habitat Destruction, and Climate Change On Nepenthes When Dominick Gravine, and avid Nepenthes collector and seller, visited Borneo in March of 2013 to trek up the slopes of mount Trusmadi, he not only saw the endangered Nepenthes species that inhabit the misty slopes, but also the effects of the rapid urbanization of the local villages. He saw ‘palm oil plantations as far as the eye Dominick Gravine and his collection of Nepenthes can see.’ (-Gravine). “Palm oil plantations completely clear the land of its natural biodiversity.’ (-Gravine). “While in the local villages, I was offered many plants which were obviously taken from the wild. The locals see these plants as a source of money. The over collect and sell them to collectors.” (-Gravine) While climbing the mountains, he saw many seed stalks cut of many plants from people along the trails, which has a large impact on these plants’ ability to reproduce. Habitat destruction and excessive poaching is having a severe Nepenthes Veitchii 'Candy Dreams'; created by Dominick Gravine effect on plant species not only in places like Borneo, but also worldwide. Although many people deny human caused endangerment of plant species due to excessive poaching, reckless destruction of habitats globally, and climate change, Effects of Poaching, Habitat Destruction, and Climate Change On Nepenthes Lucas Barron; 4/27/2018 2 has a profound, and rather severe, effect on plant species globally, but especially in extremely delicate regions of the world, such as the Indonesian islands. -
Anthesis Volume 10: 2014 -2015 Botany: an Interdisciplinary Science
Anthesis Volume 10: 2014 -2015 Botany: An Interdisciplinary Science Annual Publication of Gargi College Botanical Society Department of Botany Gargi College, Siri Fort Road New Delhi-110049 1 Anthesis Volume 10: 2014-2015 Special Focus: Botany: An Interdisciplinary Science Department of Botany Gargi College, Siri Fort Road New Delhi-110049 Cover Page Design: Leena Arora 2 Anthesis Volume 10: 2014-2015 Special Focus: Botany: An Interdisciplinary Science Contents All the topics listed below have been hyper-linked to the corresponding articles. Click on the topics to read the article. You can come back to the contents page by clicking on the link at the end of every article. Page S.No. Topic No. 1. From the Principal’s Desk 5 2. From the Editor’s Desk 6 Articles 3. Diamonds in My Backyard 8 4. Chemistry of Plant Life: At a Glance 11 5. Flashlight on Facts: Plant Nomenclature 15 6. What’s in a Name? 20 7. Wonders of Nature: Look alikes 23 8. Forensic Botany: Plant Detectives 28 9. Virus Induced Gene Silencing 32 Some Interesting Trees 10. 41 Dendrology: The Wood Science 11. 44 12. Gymnosperms: Treasure Trove of Medicines 48 13. Ayurveda: As Relevant Now 51 The Mushroom Story 14. 53 15. Agriculture Redefined 56 16. The Ficus Siblings 58 17. Student Research Projects 61 18. My Introduction to Floral World 64 3 19. Flamboyant Miracles: Blooms 69 20. Career Options in Horticulture 73 Students’ Opinion 21. Will I Be Educated? 76 22. Being A Botanist 78 23. Go Break Those Boundaries!!! 81 24. Famous Plant: Lavender 82 25. -
Spacernuclear Ribosomal DNA Sequences
The JapaneseSocietyJapanese Society for Plant Systematics ISSN1346-7S65 Acta Phytotax, Geobot. 64 (3):ll3-126 (2013) PhylogeneticAnalysis of Nepenthaceae, Based on Internal Transcribed Spacer Nuclear Ribosomal DNA Sequences FiRMAN ALAMsyAHi'2" AND MoToMi IToi JDepartment Studies. Uhiverisity oj'GeneralSystems 7blyo 153-8902,Jopan; 2Department of7btve, ofBiotogicai Science, FZiculty ofAdLithetnatics and Sciences, Ahmad Dahlan *[email protected] Uitivensi(B lanturan, ibgyakarta 55164, lhdonesia. (tiuthorfor correspondeneoj Nepenthaceae, a monotypic family of carnivorous pitcher p]ants comprising Nbpenthes, is widely dis- tributed in Southeast Asia. Tb determine the phytogeography of lVlepenthes in Southeast Asia, and te trace the evolutionary trends of taxonomically important characteristics (i.e., peristomes) of the genus, we analyzed S7 internal transcribed spacer (ITS) nuclear ribosomal DNA (nrDNA) sequences of56 spe- cies of ?Vbpenthes and 1 ITS sequence each ofDionaea muscipula ancl Ancistroeladus robertsoniorerm. To clarify the phylogenetic relationships oflVlepenthes, we examined fbur different methods ofphyloge- netic tree reconstruction. The resulting tree topologies were mostly consistent with one another except for the basal polytomies, Seven monophyletic subclades could be recognized, Similarities and differ- ences in terms of the positions of taxa between the present study and previous studies were ebserved. Judgingfromthephylogenetictreesanddistributionareaofeachspecies,Borneoappearstobeasecond- ary center of diversification fbr Nbpenthes and species ofIVkpenthes may have then radiated within the Sunda Shelfof Southeast Asia. The three character states ofthe peristomes from the upper pitchers were relatively well correlated with the grouping of the species of Nepenthes within seven subclades and showed the limitations ofthe Danser (1928) system for ?Vepenthes, Key words: ITS,IVepenthes, phylegenetic relationship, phytogeography, peristome Nepenthaceae, a monotypic family of carniv- Philippines (21 species, 20 endemic). -
Nepenthes Argentii Philippines, N. Aristo
BLUMEA 42 (1997) 1-106 A skeletal revision of Nepenthes (Nepenthaceae) Matthew Jebb & Martin Chee k Summary A skeletal world revision of the genus is presented to accompany a family account forFlora Malesi- ana. 82 species are recognised, of which 74 occur in the Malesiana region. Six species are described is raised from and five restored from as new, one species infraspecific status, species are synonymy. Many names are typified for the first time. Three widespread, or locally abundant hybrids are also included. Full descriptions are given for new (6) or recircumscribed (7) species, and emended descrip- Critical for all the Little tions of species are given where necessary (9). notes are given species. known and excluded species are discussed. An index to all published species names and an index of exsiccatae is given. Introduction Macfarlane A world revision of Nepenthes was last undertaken by (1908), and a re- Malesiana the gional revision forthe Flora area (excluding Philippines) was completed of this is to a skeletal revision, cover- by Danser (1928). The purpose paper provide issues which would be in the ing relating to Nepenthes taxonomy inappropriate text of Flora Malesiana.For the majority of species, only the original citation and that in Danser (1928) and laterpublications is given, since Danser's (1928) work provides a thorough and accurate reference to all earlier literature. 74 species are recognised in the region, and three naturally occurring hybrids are also covered for the Flora account. The hybrids N. x hookeriana Lindl. and N. x tri- chocarpa Miq. are found in Sumatra, Peninsular Malaysia and Borneo, although rare within populations, their widespread distribution necessitates their inclusion in the and other and with the of Flora. -
South American Cacti in Time and Space: Studies on the Diversification of the Tribe Cereeae, with Particular Focus on Subtribe Trichocereinae (Cactaceae)
Zurich Open Repository and Archive University of Zurich Main Library Strickhofstrasse 39 CH-8057 Zurich www.zora.uzh.ch Year: 2013 South American Cacti in time and space: studies on the diversification of the tribe Cereeae, with particular focus on subtribe Trichocereinae (Cactaceae) Lendel, Anita Posted at the Zurich Open Repository and Archive, University of Zurich ZORA URL: https://doi.org/10.5167/uzh-93287 Dissertation Published Version Originally published at: Lendel, Anita. South American Cacti in time and space: studies on the diversification of the tribe Cereeae, with particular focus on subtribe Trichocereinae (Cactaceae). 2013, University of Zurich, Faculty of Science. South American Cacti in Time and Space: Studies on the Diversification of the Tribe Cereeae, with Particular Focus on Subtribe Trichocereinae (Cactaceae) _________________________________________________________________________________ Dissertation zur Erlangung der naturwissenschaftlichen Doktorwürde (Dr.sc.nat.) vorgelegt der Mathematisch-naturwissenschaftlichen Fakultät der Universität Zürich von Anita Lendel aus Kroatien Promotionskomitee: Prof. Dr. H. Peter Linder (Vorsitz) PD. Dr. Reto Nyffeler Prof. Dr. Elena Conti Zürich, 2013 Table of Contents Acknowledgments 1 Introduction 3 Chapter 1. Phylogenetics and taxonomy of the tribe Cereeae s.l., with particular focus 15 on the subtribe Trichocereinae (Cactaceae – Cactoideae) Chapter 2. Floral evolution in the South American tribe Cereeae s.l. (Cactaceae: 53 Cactoideae): Pollination syndromes in a comparative phylogenetic context Chapter 3. Contemporaneous and recent radiations of the world’s major succulent 86 plant lineages Chapter 4. Tackling the molecular dating paradox: underestimated pitfalls and best 121 strategies when fossils are scarce Outlook and Future Research 207 Curriculum Vitae 209 Summary 211 Zusammenfassung 213 Acknowledgments I really believe that no one can go through the process of doing a PhD and come out without being changed at a very profound level. -
The Coordinate Regulation of Digestive Enzymes in the Pitchers of Nepenthes Ventricosa
Rollins College Rollins Scholarship Online Honors Program Theses Spring 2020 The Coordinate Regulation of Digestive Enzymes in the Pitchers of Nepenthes ventricosa Zephyr Anne Lenninger [email protected] Follow this and additional works at: https://scholarship.rollins.edu/honors Part of the Plant Biology Commons Recommended Citation Lenninger, Zephyr Anne, "The Coordinate Regulation of Digestive Enzymes in the Pitchers of Nepenthes ventricosa" (2020). Honors Program Theses. 120. https://scholarship.rollins.edu/honors/120 This Open Access is brought to you for free and open access by Rollins Scholarship Online. It has been accepted for inclusion in Honors Program Theses by an authorized administrator of Rollins Scholarship Online. For more information, please contact [email protected]. The Coordinate Regulation of Digestive Enzymes in the Pitchers of Nepenthes ventricosa Zephyr Lenninger Rollins College 2020 Abstract Many species of plants have adopted carnivory as a way to obtain supplementary nutrients from otherwise nutrient deficient environments. One such species, Nepenthes ventricosa, is characterized by a pitcher shaped passive trap. This trap is filled with a digestive fluid that consists of many different digestive enzymes, the majority of which seem to have been recruited from pathogen resistance systems. The present study attempted to determine whether the introduction of a prey stimulus will coordinately upregulate the enzymatic expression of a chitinase and a protease while also identifying specific chitinases that are expressed by Nepenthes ventricosa. We were able to successfully clone NrCHIT1 from a mature Nepenthes ventricosa pitcher via a TOPO-vector system. In order to asses enzymatic expression, we utilized RT-qPCR on pitchers treated with chitin, BSA, or water. -
Profile on Environmental and Social Considerations in Philippines
Profile on Environmental and Social Considerations in Philippines ANNEX September 2011 Japan International Cooperation Agency (JICA) CRE CR(5) 11-014 Table of Contents IUCN Red List of the Philippines (2007) Red List of the Philippine Red Data Book,1997 Threatened Species by the National Laws Philippine Fauna and Flora under CITES APPENDIX, 2011 Protected Areas under the NIPAS Act in the Philippines (as of June, 2011) Environmental Standards CDM Projects in the Philippines (as of March 31, 2011) Project Grouping Matrix for Determination of EIA Report Type EIA Coverage & Requirements Screening Checklists Outlines of Required Documents by PEISS IUCN Red List of the Philippines ,2007 IUCN Red List of the Philippines (2007) # Scientific Name Common Name Category Mammals 1 Acerodon jubatus GOLDEN-CAPPED FRUIT BAT EN 2 Acerodon leucotis PALAWAN FRUIT BAT VU 3 Alionycteris paucidentata MINDANAO PYGMY FRUIT BAT VU 4 Anonymomys mindorensis MINDORO CLIMBING RAT VU 5 Apomys sacobianus LONG-NOSED LUZON FOREST MOUSE VU 6 Apomys gracilirostris LARGE MINDORO FOREST MOUSE VU 7 Archboldomys luzonensis MT ISAROG SHREW-MOUSE EN 8 Axis calamianensis CALAMANIAN DEER EN 9 Bubalus mindorensis MINDORO DWARF BUFFALO CR 10 Cervus alfredi PHILLIPINE SPOTTED DEER EN 11 Chrotomys gonzalesi ISAROG STRIPED SHREW-RAT, CR 12 Chrotomys whiteheadi LUZON STRIPED RAT VU 13 Crateromys australis DINAGAT BUSHY-TAILED CLOUD RAT EN 14 Crateromys schadenbergi GIANT BUSHY-TAILED CLOUD RAT VU 15 Crateromys paulus OILIN BUSHY-TAILED CLOUD RAT CR 16 Crateromys heaneyi PANAY BUSHY-TAILED