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												A Case Study with the Monospecific Genus Aegina
MARINE BIOLOGY RESEARCH, 2017 https://doi.org/10.1080/17451000.2016.1268261 ORIGINAL ARTICLE The perils of online biogeographic databases: a case study with the ‘monospecific’ genus Aegina (Cnidaria, Hydrozoa, Narcomedusae) Dhugal John Lindsaya,b, Mary Matilda Grossmannc, Bastian Bentlaged,e, Allen Gilbert Collinsd, Ryo Minemizuf, Russell Ross Hopcroftg, Hiroshi Miyakeb, Mitsuko Hidaka-Umetsua,b and Jun Nishikawah aEnvironmental Impact Assessment Research Group, Research and Development Center for Submarine Resources, Japan Agency for Marine- Earth Science and Technology (JAMSTEC), Yokosuka, Japan; bLaboratory of Aquatic Ecology, School of Marine Bioscience, Kitasato University, Sagamihara, Japan; cMarine Biophysics Unit, Okinawa Institute of Science and Technology (OIST), Onna, Japan; dDepartment of Invertebrate Zoology, National Museum of Natural History, Smithsonian Institution, Washington, DC, USA; eMarine Laboratory, University of Guam, Mangilao, USA; fRyo Minemizu Photo Office, Shimizu, Japan; gInstitute of Marine Science, University of Alaska Fairbanks, Alaska, USA; hDepartment of Marine Biology, Tokai University, Shizuoka, Japan ABSTRACT ARTICLE HISTORY Online biogeographic databases are increasingly being used as data sources for scientific papers Received 23 May 2016 and reports, for example, to characterize global patterns and predictors of marine biodiversity and Accepted 28 November 2016 to identify areas of ecological significance in the open oceans and deep seas. However, the utility RESPONSIBLE EDITOR of such databases is entirely dependent on the quality of the data they contain. We present a case Stefania Puce study that evaluated online biogeographic information available for a hydrozoan narcomedusan jellyfish, Aegina citrea. This medusa is considered one of the easiest to identify because it is one of KEYWORDS very few species with only four large tentacles protruding from midway up the exumbrella and it Biogeography databases; is the only recognized species in its genus. - 
												
												CNIDARIA Corals, Medusae, Hydroids, Myxozoans
FOUR Phylum CNIDARIA corals, medusae, hydroids, myxozoans STEPHEN D. CAIRNS, LISA-ANN GERSHWIN, FRED J. BROOK, PHILIP PUGH, ELLIOT W. Dawson, OscaR OcaÑA V., WILLEM VERvooRT, GARY WILLIAMS, JEANETTE E. Watson, DENNIS M. OPREsko, PETER SCHUCHERT, P. MICHAEL HINE, DENNIS P. GORDON, HAMISH J. CAMPBELL, ANTHONY J. WRIGHT, JUAN A. SÁNCHEZ, DAPHNE G. FAUTIN his ancient phylum of mostly marine organisms is best known for its contribution to geomorphological features, forming thousands of square Tkilometres of coral reefs in warm tropical waters. Their fossil remains contribute to some limestones. Cnidarians are also significant components of the plankton, where large medusae – popularly called jellyfish – and colonial forms like Portuguese man-of-war and stringy siphonophores prey on other organisms including small fish. Some of these species are justly feared by humans for their stings, which in some cases can be fatal. Certainly, most New Zealanders will have encountered cnidarians when rambling along beaches and fossicking in rock pools where sea anemones and diminutive bushy hydroids abound. In New Zealand’s fiords and in deeper water on seamounts, black corals and branching gorgonians can form veritable trees five metres high or more. In contrast, inland inhabitants of continental landmasses who have never, or rarely, seen an ocean or visited a seashore can hardly be impressed with the Cnidaria as a phylum – freshwater cnidarians are relatively few, restricted to tiny hydras, the branching hydroid Cordylophora, and rare medusae. Worldwide, there are about 10,000 described species, with perhaps half as many again undescribed. All cnidarians have nettle cells known as nematocysts (or cnidae – from the Greek, knide, a nettle), extraordinarily complex structures that are effectively invaginated coiled tubes within a cell. - 
												
												Bibliography on the Scyphozoa with Selected References on Hydrozoa and Anthozoa
W&M ScholarWorks Reports 1971 Bibliography on the Scyphozoa with selected references on Hydrozoa and Anthozoa Dale R. Calder Virginia Institute of Marine Science Harold N. Cones Virginia Institute of Marine Science Edwin B. Joseph Virginia Institute of Marine Science Follow this and additional works at: https://scholarworks.wm.edu/reports Part of the Marine Biology Commons, and the Zoology Commons Recommended Citation Calder, D. R., Cones, H. N., & Joseph, E. B. (1971) Bibliography on the Scyphozoa with selected references on Hydrozoa and Anthozoa. Special scientific eporr t (Virginia Institute of Marine Science) ; no. 59.. Virginia Institute of Marine Science, William & Mary. https://doi.org/10.21220/V59B3R This Report is brought to you for free and open access by W&M ScholarWorks. It has been accepted for inclusion in Reports by an authorized administrator of W&M ScholarWorks. For more information, please contact [email protected]. BIBLIOGRAPHY on the SCYPHOZOA WITH SELECTED REFERENCES ON HYDROZOA and ANTHOZOA Dale R. Calder, Harold N. Cones, Edwin B. Joseph SPECIAL SCIENTIFIC REPORT NO. 59 VIRGINIA INSTITUTE. OF MARINE SCIENCE GLOUCESTER POINT, VIRGINIA 23012 AUGUST, 1971 BIBLIOGRAPHY ON THE SCYPHOZOA, WITH SELECTED REFERENCES ON HYDROZOA AND ANTHOZOA Dale R. Calder, Harold N. Cones, ar,d Edwin B. Joseph SPECIAL SCIENTIFIC REPORT NO. 59 VIRGINIA INSTITUTE OF MARINE SCIENCE Gloucester Point, Virginia 23062 w. J. Hargis, Jr. April 1971 Director i INTRODUCTION Our goal in assembling this bibliography has been to bring together literature references on all aspects of scyphozoan research. Compilation was begun in 1967 as a card file of references to publications on the Scyphozoa; selected references to hydrozoan and anthozoan studies that were considered relevant to the study of scyphozoans were included. - 
												
												Abundant Box Jellyfish, Chironex Sp. (Cnidaria: Cubozoa: Chirodropidae), Discovered at Depths of Over 50 M on Western Australian Coastal Reefs
www.nature.com/scientificreports OPEN Abundant box jellyfish,Chironex sp. (Cnidaria: Cubozoa: Chirodropidae), discovered at depths of over 50 m Received: 28 September 2015 Accepted: 11 February 2016 on western Australian coastal reefs Published: 29 February 2016 John K. Keesing1,5, Joanna Strzelecki1,5, Marcus Stowar2, Mary Wakeford2,5, Karen J. Miller2,5, Lisa-Ann Gershwin3 & Dongyan Liu4 Box jellyfish cause human fatalities and have a life cycle and habit associated with shallow waters (<5 m) in mangrove creeks, coastal beaches, embayments. In north-western Australia, tow video and epibenthic sled surveys discovered large numbers (64 in a 1500 m tow or 0.05 m−2) of Chironex sp. very near to the benthos (<50 cm) at depths of 39–56 m. This is the first record of a population of box jellyfish closely associated with the benthos at such depths. Chironex were not widespread, occurring only in 2 of 33 tow videos and 3 of 41 epibenthic sleds spread over 2000 km2. All Chironex filmed or captured were on low to medium relief reefs with rich filter feeder communities. None were on soft sediment habitat despite these habitats comprising 49% of all sites. The importance of the reef habitat to Chironex remains unclear. Being associated with filter feeder communities might represent a hazard, and other studies have shown C. fleckeri avoid habitats which represent a risk of entanglement of their tentacles. Most of our observations were made during the period of lowest tidal current flow in the morning. This may represent a period favourable for active hunting for prey close to the seabed. - 
												
												The Tropical Box Jellyfish in North East Australia
Tropical box jellyfish: the world's deadliest animals Tom Cross1, 3, Dorothy Cross2 and Marc Shorten1 1 Department of Zoology, Ecology and Plant Science, University College Cork 2 Mullaghgloss, Renvyle, County Galway 3 Arising from a public lecture delivered by TC in December 2002 Introduction The opportunity arose, because of a sciart award (sponsored by the Wellcome Trust and British Arts Council and other bodies, and designed to allow scientists and artists to work together) to brother and sister, scientist Tom Cross and artist Dorothy Cross, to work on the tropical box jellyfish in North East Australia. The data collected in the form of digital video "footage" of swimming, provided the materials used by Marc Shorten in his MSc project. In a talk forming part of the 2002/2003 UCC public lecture series, Professor Tom Cross described the features of these animals and then recounted the work undertaken on swimming biomechanics. A similar format is used in this chapter. Chironex fleckeri in mid water General characteristics Box jellyfish, also known as “marine stingers” or “sea wasps”, are of great interest because the group, called Cubomedusa by zoologists, contain some of the most venomous animals on earth, but appear to have been the object of very little scientific study. Cubomedusa are very different from medusae of other classes of the Phylum Cnidaria (“true jellyfish”) being far more substantial than animals of Classes Syphozoa or Hydrozoa. Whereas the bell of these other two classes are extremely jelly-like in their consistency, cubozoans are more akin to polyurethane than jelly. Cubozoans are roughly cubical, and this is where they get their vernacular name “box jellyfish”. - 
												
												Impact of Scyphozoan Venoms on Human Health and Current First Aid Options for Stings
toxins Review Impact of Scyphozoan Venoms on Human Health and Current First Aid Options for Stings Alessia Remigante 1,2, Roberta Costa 1, Rossana Morabito 2 ID , Giuseppa La Spada 2, Angela Marino 2 ID and Silvia Dossena 1,* ID 1 Institute of Pharmacology and Toxicology, Paracelsus Medical University, Strubergasse 21, A-5020 Salzburg, Austria; [email protected] (A.R.); [email protected] (R.C.) 2 Department of Chemical, Biological, Pharmaceutical and Environmental Sciences, University of Messina, Viale F. Stagno D'Alcontres 31, I-98166 Messina, Italy; [email protected] (R.M.); [email protected] (G.L.S.); [email protected] (A.M.) * Correspondence: [email protected]; Tel.: +43-662-2420-80564 Received: 10 February 2018; Accepted: 21 March 2018; Published: 23 March 2018 Abstract: Cnidaria include the most venomous animals of the world. Among Cnidaria, Scyphozoa (true jellyfish) are ubiquitous, abundant, and often come into accidental contact with humans and, therefore, represent a threat for public health and safety. The venom of Scyphozoa is a complex mixture of bioactive substances—including thermolabile enzymes such as phospholipases, metalloproteinases, and, possibly, pore-forming proteins—and is only partially characterized. Scyphozoan stings may lead to local and systemic reactions via toxic and immunological mechanisms; some of these reactions may represent a medical emergency. However, the adoption of safe and efficacious first aid measures for jellyfish stings is hampered by the diffusion of folk remedies, anecdotal reports, and lack of consensus in the scientific literature. Species-specific differences may hinder the identification of treatments that work for all stings. - 
												
												Rapid and Accurate Species-Specific PCR for the Identification of Lethal
International Journal of Environmental Research and Public Health Article Rapid and Accurate Species-Specific PCR for the Identification of Lethal Chironex Box Jellyfish in Thailand Nuankanya Sathirapongsasuti 1,* , Kasetsin Khonchom 1, Thunyaporn Poonsawat 2,3, Mitila Pransilpa 4, Supaporn Ongsara 5, Usawadee Detsri 5,6, Suwimon Bungbai 7, Sam-ang Lawanangkoon 8, Worawut Pattanaporkrattana 8 and Satariya Trakulsrichai 9,10 1 Section of Translational Medicine, Faculty of Medicine Ramathibodi Hospital, Mahidol University, Bangkok 10400, Thailand; [email protected] 2 Marine and Coastal Resources Research Center, Central Gulf of Thailand, Chumphon 86000, Thailand; thunya-fl[email protected] 3 Marine and Coastal Resources Research Center, Lower Gulf of Thailand, Songkhla 90100, Thailand 4 Marine and Coastal Resources Research Center, Eastern Gulf of Thailand, Rayong 21170, Thailand; [email protected] 5 Marine and Coastal Resources Research Center, Lower Andaman, Trang 92150, Thailand; [email protected] (S.O.); [email protected] (U.D.) 6 Phuket Marine Biological Center, Phuket 83000, Thailand 7 Koh Kut Hospital, Trat 23170, Thailand; [email protected] 8 Koh Phangan Hospital, Surat Thani 84280, Thailand; [email protected] (S.-a.L.); [email protected] (W.P.) 9 Ramathibodi Poison Center, Faculty of Medicine, Ramathibodi Hospital, Mahidol University, Bangkok 10400, Thailand; [email protected] 10 Department of Emergency Medicine, Faculty of Medicine, Ramathibodi Hospital, Mahidol University, Bangkok 10400, Thailand * Correspondence: [email protected]; Tel.: +66-(0)2-201-2613; Fax: +66-(0)2-201-0116 Citation: Sathirapongsasuti, N.; Khonchom, K.; Poonsawat, T.; Abstract: Box jellyfish are extremely potent venom-producing marine organisms. While they have Pransilpa, M.; Ongsara, S.; Detsri, U.; been found worldwide, the highest health burden has been anticipated to be the tropical Indo-Pacific Bungbai, S.; Lawanangkoon, S.-a.; of Southeast Asia (SEA). - 
												
												Zootaxa,The Phylum Cnidaria: a Review of Phylogenetic Patterns And
P T J Zootaxa 1668: 127-182 (2007) ISSN 1175-5326 (print edition) www.mapress.com/zootaxa/ ZOOTAXA Copyright © 2007 • Magnolia Press ISSN 1175-5334 (online edition) The phylum Cnidaria: A review of phylogenetic patterns and diversity 300 years after Linnaeus* MARYMEGAN DALY1, MERCER R. BRUGLER2, PAULYN CARTWRIGHT3, ALLEN G. COLLINS4, MICHAEL N. DAWSON5, DAPHNE G. FAUTIN3, SCOTT C. FRANCE2, CATHERINE S. MCFADDEN6, DENNIS M. OPRESKO7, ESTEFANIA RODRIGUEZ1, SANDRA L. ROMANO8 & JOEL L. STAKE8 1 1 Department o f Evolution, Ecology & Organlsmal Biology The Ohio State University Columbus Ohio USA 43210 [email protected]; [email protected] 2 Department o f Biology, University o f Louisiana at Lafayette, Lafayette, LA USA [email protected] ; [email protected] 3 Department o f Ecology and Evolutionary Biology, University o f Kansas, Lawrence, Kansas 66045, USA University o f Kansas, Lawrence KS USA [email protected]; [email protected] 4 National Systematics Laboratory, NOAA Fisheries Service, Smithsonian Institution, Washington DC USA 20013-7012 collinsa @si. edu 5 School o f Natural Sciences, University o f California Merced, Merced C A USA 95344 [email protected] 6 Department o f Biology, Harvey Mudd College, Claremont, CA USA91711 [email protected] 1 Oak Ridge National Laboratory, Oak Ridge, TN, USA 8 Division o f Science and Mathematics, University o f the Virgin Islands, St Thomas USVI00802 [email protected] ; jstake @yahoo. com * Irr. Zhang, Z.-Q. & Shear, W.A. (Eds) (2007) Linnaeus Tercentenary: Progress in Invertebrate Taxonomy. Zootaxa, 1668, 1-766. Table of contents A b stract.............................................................................................................................................................................................. 128 The Linnaean perspective on Cnidarian diversity ...................................................................................................................... - 
												
												Phylogenetics of Hydroidolina (Hydrozoa: Cnidaria) Paulyn Cartwright1, Nathaniel M
Journal of the Marine Biological Association of the United Kingdom, page 1 of 10. #2008 Marine Biological Association of the United Kingdom doi:10.1017/S0025315408002257 Printed in the United Kingdom Phylogenetics of Hydroidolina (Hydrozoa: Cnidaria) paulyn cartwright1, nathaniel m. evans1, casey w. dunn2, antonio c. marques3, maria pia miglietta4, peter schuchert5 and allen g. collins6 1Department of Ecology and Evolutionary Biology, University of Kansas, Lawrence, KS 66049, USA, 2Department of Ecology and Evolutionary Biology, Brown University, Providence RI 02912, USA, 3Departamento de Zoologia, Instituto de Biocieˆncias, Universidade de Sa˜o Paulo, Sa˜o Paulo, SP, Brazil, 4Department of Biology, Pennsylvania State University, University Park, PA 16802, USA, 5Muse´um d’Histoire Naturelle, CH-1211, Gene`ve, Switzerland, 6National Systematics Laboratory of NOAA Fisheries Service, NMNH, Smithsonian Institution, Washington, DC 20013, USA Hydroidolina is a group of hydrozoans that includes Anthoathecata, Leptothecata and Siphonophorae. Previous phylogenetic analyses show strong support for Hydroidolina monophyly, but the relationships between and within its subgroups remain uncertain. In an effort to further clarify hydroidolinan relationships, we performed phylogenetic analyses on 97 hydroidolinan taxa, using DNA sequences from partial mitochondrial 16S rDNA, nearly complete nuclear 18S rDNA and nearly complete nuclear 28S rDNA. Our findings are consistent with previous analyses that support monophyly of Siphonophorae and Leptothecata and do not support monophyly of Anthoathecata nor its component subgroups, Filifera and Capitata. Instead, within Anthoathecata, we find support for four separate filiferan clades and two separate capitate clades (Aplanulata and Capitata sensu stricto). Our data however, lack any substantive support for discerning relationships between these eight distinct hydroidolinan clades. - 
												
												Systema Naturae. the Classification of Living Organisms
Systema Naturae. The classification of living organisms. c Alexey B. Shipunov v. 5.601 (June 26, 2007) Preface Most of researches agree that kingdom-level classification of living things needs the special rules and principles. Two approaches are possible: (a) tree- based, Hennigian approach will look for main dichotomies inside so-called “Tree of Life”; and (b) space-based, Linnaean approach will look for the key differences inside “Natural System” multidimensional “cloud”. Despite of clear advantages of tree-like approach (easy to develop rules and algorithms; trees are self-explaining), in many cases the space-based approach is still prefer- able, because it let us to summarize any kinds of taxonomically related da- ta and to compare different classifications quite easily. This approach also lead us to four-kingdom classification, but with different groups: Monera, Protista, Vegetabilia and Animalia, which represent different steps of in- creased complexity of living things, from simple prokaryotic cell to compound Nature Precedings : doi:10.1038/npre.2007.241.2 Posted 16 Aug 2007 eukaryotic cell and further to tissue/organ cell systems. The classification Only recent taxa. Viruses are not included. Abbreviations: incertae sedis (i.s.); pro parte (p.p.); sensu lato (s.l.); sedis mutabilis (sed.m.); sedis possi- bilis (sed.poss.); sensu stricto (s.str.); status mutabilis (stat.m.); quotes for “environmental” groups; asterisk for paraphyletic* taxa. 1 Regnum Monera Superphylum Archebacteria Phylum 1. Archebacteria Classis 1(1). Euryarcheota 1 2(2). Nanoarchaeota 3(3). Crenarchaeota 2 Superphylum Bacteria 3 Phylum 2. Firmicutes 4 Classis 1(4). Thermotogae sed.m. 2(5). - 
												
												SUMMARY and FUTURE WORK Not Constitute Type Material Because Gill’S (1863) Descrip- Tion Was Clearly Based on a Single Specimen
132 • SMITHSONIAN CONTRIBUTIONS TO THE MARINE SCIENCES FIGURE 11. Coryphopterus glaucofraenum, neotype, USNM 393907, Belize, 44 mm SL, DNA 6367: A, fresh; B, preserved. Designation of Neotype for Neotype Coryphopterus glaucofraenum Coryphopterus glaucofraenum Gill, USNM 393907, FIGURE 11 44 mm SL, DNA 6367, Twin Cays, Belize, mangrove edge on interior channel, 0– 6 ft. (GenBank accession no. Eschmeyer (2008) noted the need for designating a GQ367355.) neotype for Coryphopterus glaucofraenum Gill, because the whereabouts of the holotype are unknown. He also noted that four MCZ specimens assumed to be syntypes do SUMMARY AND FUTURE WORK not constitute type material because Gill’s (1863) descrip- tion was clearly based on a single specimen. Because of the Cytochrome c oxidase I sequences (DNA barcoding) historical confusion regarding the validity of C. tortugae were useful in determining the number of distinct genetic and C. venezuelae as distinct from C. glaucofraenum, and lineages within Caribbean Coryphopterus. We used the because the three species can be diffi cult to separate, we neighbor-joining tree (see Figure 1) derived from those se- have elected to designate a neotype for C. glaucofraenum quences to assemble voucher specimens (and color photo- from which we have successfully obtained a COI sequence graphs of them taken before preservation) into clades and that places the specimen in the C. glaucofraenum clade. then compared the morphology of specimens among those We hereby make the following type designation: clades. Assigning clades to species was relatively easy based 007_Baldwin_111-138_Lang.indd7_Baldwin_111-138_Lang.indd 113232 99/24/09/24/09 99:38:53:38:53 AAMM NUMBER 38 • 133 on review of original literature and examination of some CARMABI laboratory in Curacao. - 
												
												Phylogenetic and Selection Analysis of an Expanded Family of Putatively Pore-Forming Jellyfish Toxins (Cnidaria: Medusozoa)
GBE Phylogenetic and Selection Analysis of an Expanded Family of Putatively Pore-Forming Jellyfish Toxins (Cnidaria: Medusozoa) Anna M. L. Klompen 1,*EhsanKayal 2,3 Allen G. Collins 2,4 andPaulynCartwright 1 1 Department of Ecology and Evolutionary Biology, University of Kansas, Lawrence, USA Downloaded from https://academic.oup.com/gbe/article/13/6/evab081/6248095 by guest on 28 September 2021 2Department of Invertebrate Zoology, National Museum of Natural History, Smithsonian Institution, Washington, District of Columbia, USA 3Sorbonne Universite, CNRS, FR2424, Station Biologique de Roscoff, Place Georges Teissier, 29680, Roscoff, France 4National Systematics Laboratory of NOAA’s Fisheries Service, Silver Spring, Maryland, USA *Corresponding author: E-mail: [email protected] Accepted: 19 April 2021 Abstract Many jellyfish species are known to cause a painful sting, but box jellyfish (class Cubozoa) are a well-known danger to humans due to exceptionally potent venoms. Cubozoan toxicity has been attributed to the presence and abundance of cnidarian-specific pore- forming toxins called jellyfish toxins (JFTs), which are highly hemolytic and cardiotoxic. However, JFTs have also been found in other cnidarians outside of Cubozoa, and no comprehensive analysis of their phylogenetic distribution has been conducted to date. Here, we present a thorough annotation of JFTs from 147 cnidarian transcriptomes and document 111 novel putative JFTs from over 20 species within Medusozoa. Phylogenetic analyses show that JFTs form two distinct clades, which we call JFT-1 and JFT-2. JFT-1 includes all known potent cubozoan toxins, as well as hydrozoan and scyphozoan representatives, some of which were derived from medically relevant species. JFT-2 contains primarily uncharacterized JFTs.