Bioactive Peptides Produced by Cyanobacteria of the Genus Nostoc: a Review
Total Page:16
File Type:pdf, Size:1020Kb
Load more
Recommended publications
-
Early Photosynthetic Eukaryotes Inhabited Low-Salinity Habitats
Early photosynthetic eukaryotes inhabited PNAS PLUS low-salinity habitats Patricia Sánchez-Baracaldoa,1, John A. Ravenb,c, Davide Pisanid,e, and Andrew H. Knollf aSchool of Geographical Sciences, University of Bristol, Bristol BS8 1SS, United Kingdom; bDivision of Plant Science, University of Dundee at the James Hutton Institute, Dundee DD2 5DA, United Kingdom; cPlant Functional Biology and Climate Change Cluster, University of Technology Sydney, Ultimo, NSW 2007, Australia; dSchool of Biological Sciences, University of Bristol, Bristol BS8 1TH, United Kingdom; eSchool of Earth Sciences, University of Bristol, Bristol BS8 1TH, United Kingdom; and fDepartment of Organismic and Evolutionary Biology, Harvard University, Cambridge, MA 02138 Edited by Peter R. Crane, Oak Spring Garden Foundation, Upperville, Virginia, and approved July 7, 2017 (received for review December 7, 2016) The early evolutionary history of the chloroplast lineage remains estimates for the origin of plastids ranging over 800 My (7). At the an open question. It is widely accepted that the endosymbiosis that same time, the ecological setting in which this endosymbiotic event established the chloroplast lineage in eukaryotes can be traced occurred has not been fully explored (8), partly because of phy- back to a single event, in which a cyanobacterium was incorpo- logenetic uncertainties and preservational biases of the fossil re- rated into a protistan host. It is still unclear, however, which cord. Phylogenomics and trait evolution analysis have pointed to a Cyanobacteria are most closely related to the chloroplast, when the freshwater origin for Cyanobacteria (9–11), providing an approach plastid lineage first evolved, and in what habitats this endosym- to address the early diversification of terrestrial biota for which the biotic event occurred. -
Hydroxylation of the Eukaryotic Ribosomal Decoding Center Affects Translational Accuracy
Hydroxylation of the eukaryotic ribosomal decoding center affects translational accuracy Christoph Loenarza,1, Rok Sekirnika,2, Armin Thalhammera,2, Wei Gea, Ekaterina Spivakovskya, Mukram M. Mackeena,b,3, Michael A. McDonougha, Matthew E. Cockmanc, Benedikt M. Kesslerb, Peter J. Ratcliffec, Alexander Wolfa,4, and Christopher J. Schofielda,1 aChemistry Research Laboratory and Oxford Centre for Integrative Systems Biology, University of Oxford, Oxford OX1 3TA, United Kingdom; bTarget Discovery Institute, University of Oxford, Oxford OX3 7FZ, United Kingdom; and cCentre for Cellular and Molecular Physiology, University of Oxford, Oxford OX3 7BN, United Kingdom Edited by William G. Kaelin, Jr., Harvard Medical School, Boston, MA, and approved January 24, 2014 (received for review July 31, 2013) The mechanisms by which gene expression is regulated by oxygen Enzyme-catalyzed hydroxylation of intracellularly localized are of considerable interest from basic science and therapeutic proteins was once thought to be rare, but accumulating recent perspectives. Using mass spectrometric analyses of Saccharomyces evidence suggests it is widespread (11). Motivated by these cerevisiae ribosomes, we found that the amino acid residue in findings, we investigated whether the translation of mRNA to closest proximity to the decoding center, Pro-64 of the 40S subunit protein is affected by oxygen-dependent modifications. A rapidly ribosomal protein Rps23p (RPS23 Pro-62 in humans) undergoes growing eukaryotic cell devotes most of its resources to the tran- posttranslational hydroxylation. We identify RPS23 hydroxylases scription, splicing, and transport of ribosomal proteins and rRNA as a highly conserved eukaryotic subfamily of Fe(II) and 2-oxoglu- (12). We therefore reasoned that ribosomal modification is a tarate dependent oxygenases; their catalytic domain is closely re- candidate mechanism for the regulation of protein expression. -
Significance of Urinary Hydroxyproline in Man
SIGNIFICANCE OF URINARY HYDROXYPROLINE IN MAN Darwin J. Prockop, Albert Sjoerdsma J Clin Invest. 1961;40(5):843-849. https://doi.org/10.1172/JCI104318. Find the latest version: https://jci.me/104318/pdf SIGNIFICANCE OF URINARY HYDROXYPROLINE IN MAN By DARWIN J. PROCKOP AND ALBERT SJOERDSMA (From the Section of Experimental Therapeutics, National Heart Institute, Bethesda, Md.) (Submitted for publication September 27, 1960; accepted January 12, 1961) Since nearly all of the hydroxyproline of the of Marfan's syndrome (2) reflect a rapid rate of body is found in collagen, it has been suggested collagen degradation. (1, 2) that the urinary excretion of this imino An incidental discovery in the study was that acid may be an important index of collagen me- the increase in urinary hydroxyproline after in- tabolism. The origin of urinary hydroxyproline, gestion of gelatin represents an increased excre- however, is not definitely established. The iso- tion of hydroxyproline peptides. This appears to topic studies of Stetten (3) in rats indirectly sug- be the first demonstration that significant amounts gested that most of the free and peptide hydroxy- of peptides can be excreted following ingestion of proline in the body arises from the breakdown of a protein. collagen, since she found that hydroxyproline-N'5 was not significantly incorporated into collagen. MATERIALS AND METHODS Ziff, Kibrick, Dresner and Gribetz (1), on the The 8 subjects utilized in the study were hospitalized other hand, observed an increased excretion of for periods of 3 to 12 weeks; 3 were patients with Mar- hydroxyproline when it was added to the diet of fan's syndrome, 2 of whom were previously shown to have elevated excretions of hydroxyproline (2). -
Potential Cyanobacterial Inoculants for Rice Described from a Polyphasic Approach
Agrociencia Uruguay 2020 | Volume 24 | Number 2 | Article 52 DOI: 10.31285/AGRO.24.52 ISSN 2301-1548 Potential cyanobacterial inoculants for rice described from a polyphasic approach Editor Eduardo Abreo Instituto Nacional de Investigación Potenciales inoculantes Agropecuaria (INIA), Colonia, Uruguay. cianobacterianos para arroz Correspondence descritos desde un enfoque Pilar Irisarri [email protected] polifásico Received 20 May 2019 Accepted 29 Set 2020 Published 09 Nov 2020 Potential cyanobacterial inoculants Citation for rice described from a polyphasic Pérez G, Cerecetto V, Irisarri P. Potential cyanobacterial inocu- lants for rice described from a approach polyphasic approach. Agrocien- cia Uruguay [Internet]. 2020 [cited dd mmm yyyy];24(2):52. Available from: http://agrocien- ciauruguay. uy/ojs/in- dex.php/agrociencia/arti- cle/view/52 Pérez, G. 1; Cerecetto, V. 1; Irisarri, P. 1 1Universidad de la República, Facultad de Agronomía, Departamento de Biología Vegetal, Montevideo, Uruguay. Potential cyanobacterial inoculants described by a polyphasic approach Abstract Ten heterocyst cyanobacteria isolated from a temperate ricefield in Uruguay were characterized using a poly- phasic approach. Based on major phenotypic features, the isolates were divided into two different morphotypes within the Order Nostocales, filamentous without true branching. The isolates were also phylogenetically evalu- ated by their 16S rRNA and hetR gene sequences. Although the morphological classification of cyanobacteria has not always been supported by the analysis of the 16S rRNA gene, in this case the morphological identifica- tion agreed with the 16S rRNA gene phylogenetic analysis and the ten isolates were ascribed at the genus level to Nostoc or Calothrix. Four isolates were identified at species level. -
(12) Patent Application Publication (10) Pub. No.: US 2007/0254315 A1 Cox Et Al
US 20070254315A1 (19) United States (12) Patent Application Publication (10) Pub. No.: US 2007/0254315 A1 Cox et al. (43) Pub. Date: Nov. 1, 2007 (54) SCREENING FOR NEUROTOXIC AMINO (60) Provisional application No. 60/494.686, filed on Aug. ACID ASSOCATED WITH NEUROLOGICAL 12, 2003. DSORDERS Publication Classification (75) Inventors: Paul A. Cox, Provo, UT (US); Sandra A. Banack, Fullerton, CA (US); Susan (51) Int. Cl. J. Murch, Cambridge (CA) GOIN 33/566 (2006.01) GOIN 33/567 (2006.01) Correspondence Address: (52) U.S. Cl. ............................................................ 435/721 PILLSBURY WINTHROP SHAW PITTMAN LLP (57) ABSTRACT ATTENTION: DOCKETING DEPARTMENT Methods for screening for neurological disorders are dis P.O BOX 105OO closed. Specifically, methods are disclosed for screening for McLean, VA 22102 (US) neurological disorders in a Subject by analyzing a tissue sample obtained from the subject for the presence of (73) Assignee: THE INSTITUTE FOR ETHNO elevated levels of neurotoxic amino acids or neurotoxic MEDICINE, Provo, UT derivatives thereof associated with neurological disorders. In particular, methods are disclosed for diagnosing a neu (21) Appl. No.: 11/760,668 rological disorder in a subject, or predicting the likelihood of developing a neurological disorder in a Subject, by deter (22) Filed: Jun. 8, 2007 mining the levels of B-N-methylamino-L-alanine (BMAA) Related U.S. Application Data in a tissue sample obtained from the subject. Methods for screening for environmental factors associated with neuro (63) Continuation of application No. 10/731,411, filed on logical disorders are disclosed. Methods for inhibiting, treat Dec. 8, 2003, now Pat. No. 7,256,002. -
Nostocaceae (Subsection IV
African Journal of Agricultural Research Vol. 7(27), pp. 3887-3897, 17 July, 2012 Available online at http://www.academicjournals.org/AJAR DOI: 10.5897/AJAR11.837 ISSN 1991-637X ©2012 Academic Journals Full Length Research Paper Phylogenetic and morphological evaluation of two species of Nostoc (Nostocales, Cyanobacteria) in certain physiological conditions Bahareh Nowruzi1*, Ramezan-Ali Khavari-Nejad1,2, Karina Sivonen3, Bahram Kazemi4,5, Farzaneh Najafi1 and Taher Nejadsattari2 1Department of Biology, Faculty of Science, Tarbiat Moallem University, Tehran, Iran. 2Department of Biology, Science and Research Branch, Islamic Azad University, Tehran, Iran. 3Department of Applied Chemistry and Microbiology, University of Helsinki, P.O. Box 56, Viikki Biocenter, Viikinkaari 9, FIN-00014 Helsinki, Finland. 4Department of Biotechnology, Shahid Beheshti University of Medical Sciences, Tehran, Iran. 5Cellular and Molecular Biology Research Center, Shahid Beheshti University of Medical Sciences, Tehran, Iran. Accepted 25 January, 2012 Studies of cyanobacterial species are important to the global scientific community, mainly, the order, Nostocales fixes atmospheric nitrogen, thus, contributing to the fertility of agricultural soils worldwide, while others behave as nuisance microorganisms in aquatic ecosystems due to their involvement in toxic bloom events. However, in spite of their ecological importance and environmental concerns, their identification and taxonomy are still problematic and doubtful, often being based on current morphological and -
Natural Product Gene Clusters in the Filamentous Nostocales Cyanobacterium HT-58-2
life Article Natural Product Gene Clusters in the Filamentous Nostocales Cyanobacterium HT-58-2 Xiaohe Jin 1,*, Eric S. Miller 2 and Jonathan S. Lindsey 1 1 Department of Chemistry, North Carolina State University, Raleigh, NC 27695-8204, USA; [email protected] 2 Department of Plant and Microbial Biology, North Carolina State University, Raleigh, NC 27695-7615, USA; [email protected] * Correspondence: [email protected] Abstract: Cyanobacteria are known as rich repositories of natural products. One cyanobacterial- microbial consortium (isolate HT-58-2) is known to produce two fundamentally new classes of natural products: the tetrapyrrole pigments tolyporphins A–R, and the diterpenoid compounds tolypodiol, 6-deoxytolypodiol, and 11-hydroxytolypodiol. The genome (7.85 Mbp) of the Nostocales cyanobacterium HT-58-2 was annotated previously for tetrapyrrole biosynthesis genes, which led to the identification of a putative biosynthetic gene cluster (BGC) for tolyporphins. Here, bioinformatics tools have been employed to annotate the genome more broadly in an effort to identify pathways for the biosynthesis of tolypodiols as well as other natural products. A putative BGC (15 genes) for tolypodiols has been identified. Four BGCs have been identified for the biosynthesis of other natural products. Two BGCs related to nitrogen fixation may be relevant, given the association of nitrogen stress with production of tolyporphins. The results point to the rich biosynthetic capacity of the HT-58-2 cyanobacterium beyond the production of tolyporphins and tolypodiols. Citation: Jin, X.; Miller, E.S.; Lindsey, J.S. Natural Product Gene Clusters in Keywords: anatoxin-a/homoanatoxin-a; hapalosin; heterocyst glycolipids; natural products; sec- the Filamentous Nostocales ondary metabolites; shinorine; tolypodiols; tolyporphins Cyanobacterium HT-58-2. -
Interpretive Guide for Amino Acids
Interpretive Guide for Amino Acids Intervention Options LOW HIGH Essential Amino Acids Arginine (Arg) Arg Mn Histidine (His) Folate, His Isoleucine (Ile) * B6, Check for insulin insensitivity Leucine (Leu) * B6, Check for insulin insensitivity Lysine (Lys) Carnitine Vitamin C, Niacin, B6, Iron, a-KG Methionine(Met) * B6, á-KG, Mg, SAM Phenylalanine (Phe) * Iron,VitaminC,Niacin,LowPhediet Threonine(Thr) * B6, Zn Tryptophan(Trp) Trpor5-HTP Niacin, B6 Valine (Val) * B6, Check for insulin insensitivity Essential Amino Acid Derivatives Neuroendocrine Metabolism y-Aminobutyric Acid (GABA) a-KG, B6 Glycine (Gly) Gly Folate, B6,B2,B5 Serine (Ser) B6, Mn, Folate * Taurine (Tau) Tau, B6 Vit. E, Vit. C, B-Carotene, CoQ10, Lipoate Tyrosine(Tyr) Iron,Tyr,VitaminC,Niacin Cu, Iron, Vitamin C, B6 Ammonia/Energy Metabolism a-Aminoadipic Acid B6, a-KG Asparagine (Asn) Mg Aspartic Acid (Asp) a-KG, B6 Mg, Zn Citrulline (Cit) Mg, Aspartic acid Glutamic Acid (Glu) B6, a-KG Niacin, B6 Glutamine (Gln) a-KG, B6 Ornithine (Orn) Arg Mg, a-KG, B6 Sulfur Metabolism Cystine (Cys) NAC B2 Cystathionine B6 Homocystine (HCys) B6, Folate, B12, Betaine Additional Metabolites a-Amino-N-Butyric Acid a-KG, B6 B6, a-KG Alanine (Ala) * B6 Anserine Zn n-Alanine Lactobacillus and Bifidobacteria, B6 n-Aminoisobutyric Acid B6 Carnosine Zn Ethanolamine Mg Hydroxylysine (HLys) Vitamin C, Iron, a-KG Hydroxyproline (HPro) Vitamin C, Iron, a-KG 1-Methylhistidine Vitamin E, B12, Folate 3-Methylhistidine BCAAs, Vit. E, Vit. C, n-Carotene, CoQ10, Lipoate Phosphoethanolamine (PE) SAM, B12, Folate, Betaine Phosphoserine Mg Proline (Pro) a-KG Vitamin C, Niacin Sarcosine B2 * Use balanced or custom mixtures of essential amino acids Nordic Laboratiroes∙ Nygade 6, 3.sal ∙ 1164 Copenhagen K ∙ DenmarkTel: +45 33 75 1000 ∙ e-mail: [email protected] In association with ©Metametrix, Inc. -
The Nitrogen-Fixing Symbiotic Cyanobacterium, Nostoc Punctiforme Can Regulate Plant Programmed Cell Death
bioRxiv preprint doi: https://doi.org/10.1101/2020.08.13.249318; this version posted August 14, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. The nitrogen-fixing symbiotic cyanobacterium, Nostoc punctiforme can regulate plant programmed cell death Samuel P. Belton1,4, Paul F. McCabe1,2,3, Carl K. Y. Ng1,2,3* 1UCD School of Biology and Environmental Science, 2UCD Centre for Plant Science, 3UCD Earth Institute, O’Brien Centre for Science, University College Dublin, Belfield, Dublin, DN04 E25, Republic of Ireland 4Present address: DBN Plant Molecular Laboratory, National Botanic Gardens of Ireland, Dublin, D09 E7F2, Republic of Ireland *email: [email protected] Acknowledgements This work was financially supported by a Government of Ireland Postgraduate Scholarship from the Irish Research Council (GOIPG/2015/2695) to SPB. Author contributions S.P.B., P.F.M, and C.K.Y.N conceived of the study and designed the experiments. S.B. performed all the experiments and analysed the data. S.B. prepared the draft of the manuscript with the help of P.F.M and C.K.Y.N. All authors read, edited, and approved the manuscript. Competing interests The authors declare no competing interests. 1 bioRxiv preprint doi: https://doi.org/10.1101/2020.08.13.249318; this version posted August 14, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder. All rights reserved. No reuse allowed without permission. Abstract Cyanobacteria such as Nostoc spp. -
Major Commercial Products from Micro- and Macroalgae Melinda Griffiths1
Major commercial products from micro‐ and macroalgae Melinda Griffiths1, Susan T.L Harrison1, Monique Smit1,2 and Dheepak Maharajh2 1 Centre for Bioprocess Engineering Research, Department of Chemical Engineering, University of Cape Town, Rondebosch, Cape Town, South Africa, 7701 2 CSIR Biosciences, Bld 18, PO Box 395, Pretoria, South Africa, 0001 [email protected] ‐ 021 650 5523 [email protected] ‐ 021 650 4021 [email protected] – 012 841 2664 Abstract Macro‐and microalgae are used in a variety of commercial products with many more in development. This chapter outlines the major products, species used, methods of production, extraction and processing as well as market sizes and trends. Foods, nutraceuticals and feeds are the major commercial products from algae. Well‐known culinary products include Nori, Wakame, Kombu and Dulse, from whole macroalgal biomass. The microalgae Spirulina and Chlorella have been widely marketed as nutritional supplements for both humans and animals. Several microalgae with a high nutritional value and energy content are grown commercially as aquaculture feed. The major processed products from macroalgae are the hydrocolloids, including carrageenan, agars and alginates, used as gelling agents in a variety of foods and health‐care products. Pigments extracted from algae include β‐carotene, astaxanthin and phycobiliproteins. These are generally used as food colourants, as additives in animal feed or as nutraceuticals for their antioxidant properties (Radmer, 1996; Pulz, 2004). Polyunsaturated fatty acids (PUFAs) are another high‐value product derived from microalgae. Other potential products include fertilizers, fuels, cosmetics and chemicals. Algae also have application in bioremediation and CO2 sequestration, as well as producing many interesting bioactive compounds. -
Ratio of Phosphate to Amino Acids
National Institute for Health and Care Excellence Final Neonatal parenteral nutrition [D10] Ratio of phosphate to amino acids NICE guideline NG154 Evidence reviews February 2020 Final These evidence reviews were developed by the National Guideline Alliance which is part of the Royal College of Obstetricians and Gynaecologists FINAL Error! No text of specified style in document. Disclaimer The recommendations in this guideline represent the view of NICE, arrived at after careful consideration of the evidence available. When exercising their judgement, professionals are expected to take this guideline fully into account, alongside the individual needs, preferences and values of their patients or service users. The recommendations in this guideline are not mandatory and the guideline does not override the responsibility of healthcare professionals to make decisions appropriate to the circumstances of the individual patient, in consultation with the patient and/or their carer or guardian. Local commissioners and/or providers have a responsibility to enable the guideline to be applied when individual health professionals and their patients or service users wish to use it. They should do so in the context of local and national priorities for funding and developing services, and in light of their duties to have due regard to the need to eliminate unlawful discrimination, to advance equality of opportunity and to reduce health inequalities. Nothing in this guideline should be interpreted in a way that would be inconsistent with compliance with those duties. NICE guidelines cover health and care in England. Decisions on how they apply in other UK countries are made by ministers in the Welsh Government, Scottish Government, and Northern Ireland Executive. -
Isolation and Characterization of 1-Palmitoyl-2-Linoleoyl-Sn
www.nature.com/scientificreports OPEN Isolation and characterization of 1-palmitoyl-2-linoleoyl-sn-glycerol as a hormogonium-inducing factor Received: 19 April 2018 Accepted: 29 January 2019 (HIF) from the coralloid roots of Published: xx xx xxxx Cycas revoluta (Cycadaceae) Yasuyuki Hashidoko 1, Hiroaki Nishizuka1, Manato Tanaka1, Kanako Murata1, Yuta Murai2 & Makoto Hashimoto1 Coralloid roots are specialized tissues of cycads (Cycas revoluta) that are involved in symbioses with nitrogen-fxing Nostoc cyanobacteria. We found that a crude methanolic extract of coralloid roots induced diferentiation of the flamentous cell aggregates of Nostoc species into motile hormogonia. Hence, the hormogonium-inducing factor (HIF) was chased using bioassay-based isolation, and the active principle was characterized as a mixture of diacylglycerols (DAGs), mainly composed of 1-palmitoyl-2-linoleoyl-sn-glycerol (1), 1-palmitoyl-2-oleoyl-sn-glycerol (2), 1-stearoyl-2-linolenoyl- sn-glycerol (3), and 1-stearoyl-2-linoleoyl-sn-glycerol (4). Enantioselectively synthesised compound 1 showed a clear HIF activity at 1 nmol (0.6 µg) disc−1 for the flamentous cells, whereas synthesised 2-linoleoyl-3-palmitoyl-sn-glycerol (1′) and 1-palmitoyl-2-linoleoyl-rac-glycerol (1/1′) were less active than 1. Conversely, synthesised 1-linoleoyl-2-palmitoyl-rac-glycerol (8/8′) which is an acyl positional isomer of compound 1 was inactive. In addition, neither 1-monoacylglycerols nor phospholipids structurally related to 1 showed HIF-like activities. As DAGs are protein kinase C (PKC) activators, 12-O-tetradecanoylphorbol-13-acetate (12), urushiol C15:3-Δ10,13,16 (13), and a skin irritant anacardic acid C15:1-Δ8 (14) were also examined for HIF-like activities toward the Nostoc cells.