Influenza Virus a H5N1 and H1N1
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Direct Agroinoculation of Maize Seedlings by Injection with Recombinant Foxtail Mosaic Virus and Sugarcane Mosaic Virus Infectious Clones
Direct Agroinoculation of Maize Seedlings by Injection with Recombinant Foxtail Mosaic Virus and Sugarcane Mosaic Virus Infectious Clones Bliss M. Beernink*,1, Katerina L. Holan*,1, Ryan R. Lappe1, Steven A. Whitham1 1 Department of Plant Pathology and Microbiology, Iowa State University * These authors contributed equally Corresponding Author Abstract Steven A. Whitham [email protected] Agrobacterium-based inoculation approaches are widely used for introducing viral vectors into plant tissues. This study details a protocol for the injection of maize Citation seedlings near meristematic tissue with Agrobacterium carrying a viral vector. Beernink, B.M., Holan, K.L., Lappe, R.R., Recombinant foxtail mosaic virus (FoMV) clones engineered for gene silencing and Whitham, S.A. Direct Agroinoculation of Maize Seedlings by Injection with gene expression were used to optimize this method, and its use was expanded Recombinant Foxtail Mosaic Virus and to include a recombinant sugarcane mosaic virus (SCMV) engineered for gene Sugarcane Mosaic Virus Infectious Clones. J. Vis. Exp. (168), e62277, expression. Gene fragments or coding sequences of interest are inserted into a doi:10.3791/62277 (2021). modified, infectious viral genome that has been cloned into the binary T-DNA plasmid vector pCAMBIA1380. The resulting plasmid constructs are transformed into Date Published Agrobacterium tumefaciens strain GV3101. Maize seedlings as young as 4 days February 27, 2021 old can be injected near the coleoptilar node with bacteria resuspended in MgSO4 DOI -
Antiviral Bioactive Compounds of Mushrooms and Their Antiviral Mechanisms: a Review
viruses Review Antiviral Bioactive Compounds of Mushrooms and Their Antiviral Mechanisms: A Review Dong Joo Seo 1 and Changsun Choi 2,* 1 Department of Food Science and Nutrition, College of Health and Welfare and Education, Gwangju University 277 Hyodeok-ro, Nam-gu, Gwangju 61743, Korea; [email protected] 2 Department of Food and Nutrition, School of Food Science and Technology, College of Biotechnology and Natural Resources, Chung-Ang University, 4726 Seodongdaero, Daeduck-myun, Anseong-si, Gyeonggi-do 17546, Korea * Correspondence: [email protected]; Tel.: +82-31-670-4589; Fax: +82-31-676-8741 Abstract: Mushrooms are used in their natural form as a food supplement and food additive. In addition, several bioactive compounds beneficial for human health have been derived from mushrooms. Among them, polysaccharides, carbohydrate-binding protein, peptides, proteins, enzymes, polyphenols, triterpenes, triterpenoids, and several other compounds exert antiviral activity against DNA and RNA viruses. Their antiviral targets were mostly virus entry, viral genome replication, viral proteins, and cellular proteins and influenced immune modulation, which was evaluated through pre-, simultaneous-, co-, and post-treatment in vitro and in vivo studies. In particular, they treated and relieved the viral diseases caused by herpes simplex virus, influenza virus, and human immunodeficiency virus (HIV). Some mushroom compounds that act against HIV, influenza A virus, and hepatitis C virus showed antiviral effects comparable to those of antiviral drugs. Therefore, bioactive compounds from mushrooms could be candidates for treating viral infections. Citation: Seo, D.J.; Choi, C. Antiviral Bioactive Compounds of Mushrooms Keywords: mushroom; bioactive compound; virus; infection; antiviral mechanism and Their Antiviral Mechanisms: A Review. -
Influenza Virus Infections in Humans October 2018
Influenza virus infections in humans October 2018 This note is provided in order to clarify the differences among seasonal influenza, pandemic influenza, and zoonotic or variant influenza. Seasonal influenza Seasonal influenza viruses circulate and cause disease in humans every year. In temperate climates, disease tends to occur seasonally in the winter months, spreading from person-to- person through sneezing, coughing, or touching contaminated surfaces. Seasonal influenza viruses can cause mild to severe illness and even death, particularly in some high-risk individuals. Persons at increased risk for severe disease include pregnant women, the very young and very old, immune-compromised people, and people with chronic underlying medical conditions. Seasonal influenza viruses evolve continuously, which means that people can get infected multiple times throughout their lives. Therefore the components of seasonal influenza vaccines are reviewed frequently (currently biannually) and updated periodically to ensure continued effectiveness of the vaccines. There are three large groupings or types of seasonal influenza viruses, labeled A, B, and C. Type A influenza viruses are further divided into subtypes according to the specific variety and combinations of two proteins that occur on the surface of the virus, the hemagglutinin or “H” protein and the neuraminidase or “N” protein. Currently, influenza A(H1N1) and A(H3N2) are the circulating seasonal influenza A virus subtypes. This seasonal A(H1N1) virus is the same virus that caused the 2009 influenza pandemic, as it is now circulating seasonally. In addition, there are two type B viruses that are also circulating as seasonal influenza viruses, which are named after the areas where they were first identified, Victoria lineage and Yamagata lineage. -
Detection of Respiratory Viruses and Subtype Identification of Inffuenza a Viruses by Greenechipresp Oligonucleotide Microarray
JOURNAL OF CLINICAL MICROBIOLOGY, Aug. 2007, p. 2359–2364 Vol. 45, No. 8 0095-1137/07/$08.00ϩ0 doi:10.1128/JCM.00737-07 Copyright © 2007, American Society for Microbiology. All Rights Reserved. Detection of Respiratory Viruses and Subtype Identification of Influenza A Viruses by GreeneChipResp Oligonucleotide Microarrayᰔ† Phenix-Lan Quan,1‡ Gustavo Palacios,1‡ Omar J. Jabado,1 Sean Conlan,1 David L. Hirschberg,2 Francisco Pozo,3 Philippa J. M. Jack,4 Daniel Cisterna,5 Neil Renwick,1 Jeffrey Hui,1 Andrew Drysdale,1 Rachel Amos-Ritchie,4 Elsa Baumeister,5 Vilma Savy,5 Kelly M. Lager,6 Ju¨rgen A. Richt,6 David B. Boyle,4 Adolfo Garcı´a-Sastre,7 Inmaculada Casas,3 Pilar Perez-Bren˜a,3 Thomas Briese,1 and W. Ian Lipkin1* Jerome L. and Dawn Greene Infectious Disease Laboratory, Mailman School of Public Health, Columbia University, New York, New York1; Stanford School of Medicine, Palo Alto, California2; Centro Nacional de Microbiologia, Instituto de Salud Carlos III, Madrid, Spain3; CSIRO Livestock Industries, Australian Animal Health Laboratory, Victoria, Australia4; Instituto Nacional de Enfermedades Infecciosas, ANLIS Dr. Carlos G. Malbra´n, Buenos Aires, Argentina5; National Animal Disease Center, USDA, Ames, Iowa6; and Department of Microbiology and Emerging Pathogens Institute, 7 Mount Sinai School of Medicine, New York, New York Downloaded from Received 4 April 2007/Returned for modification 15 May 2007/Accepted 21 May 2007 Acute respiratory infections are significant causes of morbidity, mortality, and economic burden worldwide. An accurate, early differential diagnosis may alter individual clinical management as well as facilitate the recognition of outbreaks that have implications for public health. -
Recombinant and Chimeric Viruses
Recombinant and chimeric viruses: Evaluation of risks associated with changes in tropism Ben P.H. Peeters Animal Sciences Group, Wageningen University and Research Centre, Division of Infectious Diseases, P.O. Box 65, 8200 AB Lelystad, The Netherlands. May 2005 This report represents the personal opinion of the author. The interpretation of the data presented in this report is the sole responsibility of the author and does not necessarily represent the opinion of COGEM or the Animal Sciences Group. Dit rapport is op persoonlijke titel door de auteur samengesteld. De interpretatie van de gepresenteerde gegevens komt geheel voor rekening van de auteur en representeert niet de mening van de COGEM, noch die van de Animal Sciences Group. Advisory Committee Prof. dr. R.C. Hoeben (Chairman) Leiden University Medical Centre Dr. D. van Zaane Wageningen University and Research Centre Dr. C. van Maanen Animal Health Service Drs. D. Louz Bureau Genetically Modified Organisms Ing. A.M.P van Beurden Commission on Genetic Modification Recombinant and chimeric viruses 2 INHOUDSOPGAVE RECOMBINANT AND CHIMERIC VIRUSES: EVALUATION OF RISKS ASSOCIATED WITH CHANGES IN TROPISM Executive summary............................................................................................................................... 5 Introduction............................................................................................................................................ 7 1. Genetic modification of viruses .................................................................................................9 -
Call to Action: the Dangers of Influenza and COVID-19 in Adults
Call to Action The Dangers of Influenza and COVID-19 in Adults with Chronic Health Conditions October 2020 Experts urge all healthcare professionals to prioritize influenza vaccination to help protect adults with chronic health conditions during the COVID-19 pandemic The recommendations in this Call to Action are based on discussions from an Call to Action August 2020 Roundtable convened by the National Foundation for Infectious The Dangers of Influenza Diseases (NFID). The multidisciplinary and COVID-19 in Adults with group of subject matter experts Chronic Health Conditions explored the risks of co-circulation and co-infection with influenza and SARS-CoV-2 viruses in adults with chronic Overview health conditions from the perspective While every influenza (flu) season is unpredictable, of their specialized areas of medicine the 2020-2021 season is characterized by an and discussed strategies to protect unprecedented dual threat: co-circulation of these vulnerable populations. influenza and the novel coronavirus (SARS-CoV-2) that causes COVID-19. Moreover, there is concern Experts agreed that higher levels of that co-circulation and co-infection with influenza influenza vaccination coverage during and COVID-19 viruses could be especially harmful, the 2020-2021 influenza season could particularly among adults at increased risk of reduce the number of influenza-related influenza-related complications. hospitalizations, helping to avoid Influenza poses serious health risks to adults unnecessary strain on the US healthcare with certain chronic health conditions including system during the COVID-19 pandemic, heart disease, lung disease, and diabetes. The so that healthcare facilities have the increased risk of influenza-related complications capacity to provide care to patients includes the potential exacerbation of underlying with COVID-19. -
Adenoviral Vector-Based Vaccine Platforms for Developing the Next Generation of Influenza Vaccines
Review Adenoviral Vector-Based Vaccine Platforms for Developing the Next Generation of Influenza Vaccines Ekramy E. Sayedahmed 1 , Ahmed Elkashif 1, Marwa Alhashimi 1, Suryaprakash Sambhara 2,* and Suresh K. Mittal 1,* 1 Department of Comparative Pathobiology, Purdue Institute for Immunology, Inflammation and Infectious Disease, Purdue University Center for Cancer Research, College of Veterinary Medicine, Purdue University, West Lafayette, IN 47907, USA; [email protected] (E.E.S.); [email protected] (A.E.); [email protected] (M.A.) 2 Influenza Division, Centers for Disease Control and Prevention, Atlanta, GA 30333, USA * Correspondence: [email protected] (S.S.); [email protected] (S.K.M.) Received: 2 August 2020; Accepted: 17 September 2020; Published: 1 October 2020 Abstract: Ever since the discovery of vaccines, many deadly diseases have been contained worldwide, ultimately culminating in the eradication of smallpox and polio, which represented significant medical achievements in human health. However, this does not account for the threat influenza poses on public health. The currently licensed seasonal influenza vaccines primarily confer excellent strain-specific protection. In addition to the seasonal influenza viruses, the emergence and spread of avian influenza pandemic viruses such as H5N1, H7N9, H7N7, and H9N2 to humans have highlighted the urgent need to adopt a new global preparedness for an influenza pandemic. It is vital to explore new strategies for the development of effective vaccines for pandemic and seasonal influenza viruses. The new vaccine approaches should provide durable and broad protection with the capability of large-scale vaccine production within a short time. The adenoviral (Ad) vector-based vaccine platform offers a robust egg-independent production system for manufacturing large numbers of influenza vaccines inexpensively in a short timeframe. -
Bronchiolitis
Bronchiolitis What is bronchiolitis? Bronchiolitis is a viral infection of the lungs that usually affects infants. There is swelling in the smaller airways or bronchioles of the lung, which causes coughing and wheezing. Bronchiolitis is the most common reason for children under 1 year old to be admitted to the hospital. What are the symptoms of bronchiolitis? The following are the most common symptoms of bronchiolitis. However, each child may experience symptoms differently. Symptoms may include: Runny nose or nasal congestion Fever Cough Changes in breathing patterns (wheezing and breathing faster or harder are common) Decreased appetite Fussiness Vomiting What causes bronchiolitis? Bronchiolitis is a common illness caused by different viruses. The most common virus causing this infection is Respiratory Syncytial Virus (RSV). However, many other viruses can cause bronchiolitis including: Influenza, Parainfluenza, Rhinovirus, Adenovirus, and Human metapneumovirus. Initially, the virus causes an infection in the upper airways, and then spreads downward into the lower airways of the lungs. The virus causes swelling of the airways. Mucus is also produced in the airways. This narrowing of the airways can make it difficult for your child to breath, eat, or nurse. How is bronchiolitis diagnosed? Bronchiolitis is usually diagnosed on the history and physical examination of the child. Antibiotics are not helpful in treating viruses and are not needed to treat bronchiolitis. Because there is no cure for the disease, the goal of treatment is to make your child comfortable and to support their symptoms. This treatment may include suctioning to keep the airways clear, extra oxygen if the blood oxygen levels are low, or hydration if your child is not able to feed well. -
Avian Influenza Outbreaks in the United States Q&A
USDA Questions and Answers: Avian Influenza Outbreaks in the United States April 2015 Avian Influenza in the United States Q. Does highly pathogenic avian influenza currently exist in the United States? A. Since mid-December 2014, there have been several ongoing highly pathogenic avian influenza (HPAI) H5 incidents along the Pacific, Central and Mississippi Flyways. Cases in wild birds, captive wild birds, backyard poultry or commercial poultry have been reported in Arkansas, California, Iowa, Idaho, Kansas, Minnesota, Missouri, Montana, North Dakota, Nevada, Oregon, Utah, South Dakota, Washington, Wisconsin and Wyoming. Details are available on the APHIS website. The HPAI strains detected recently in these flyways are H5N2, H5N8 and H5N1, but primarily H5N2 in turkey flocks. Q. Can people catch these highly pathogenic avian influenza strains that are being detected in these outbreaks? A. CDC considers the risk to people from these HPAI H5 viruses in wild birds, backyard flocks, and commercial poultry, to be low. No human infections with these viruses have been detected at this time, however, similar viruses have infected people. It’s possible that human infections with these viruses may occur. While human infections are possible, infection with avian influenza viruses in general are rare and – when they occur – these viruses have not spread easily to other people. These reports of H5-infected wild birds and poultry in the United States do not signal the start of a pandemic. Q. How is USDA dealing with these HPAI outbreaks? A. The United States has the strongest AI surveillance program in the world so that the food supply remains safe. -
Roper, Hemmons
ORIGINS OF TRANSLOCATIONS IN ASPERGZLLUS NZDULANSl ETTA KAFER Department of Genetics, McGill University, Montreal, Cam& T was realized early in the course of the genetic analysis of the ascomycete ‘Aspergillus nidukns that several of the strains with X-ray induced mutants contain chromosomal aberrations (e.g. two cases mentioned by PONTECORVO, ROPER,HEMMONS, MACDONALD and BUFTON1953). At that time all evidence came from meiotic analysis. In crosses heterozygous for chromosomal aberra- tions, crossing over appears to be reduced since certain unbalanced crossover types show low viability. In fungi, this results in an unusually high frequency of aborted and abnormal ascospores, corresponding to defective pollen in higher plants that show “semisterility” as a result of chromosome aberrations. Ascopore patterns can be used to detect visually the presence of aberrations in Neurospora, either in intact asci (MCCLINTOCK1945), or in random spores (PERKINS, GLASSEYand BLOOM1962). The nonlinear ascus of Aspergillus is too small to make use of this method routinely even though similar patterns have been ob- served in asci from a cross which is now known to have been heterozygous for at least three aberrations (ELLIOTT1960). On the other hand, the discovery of mitotic recombination in Aspergillus (ROPER1952; PONTECORVOand ROPER 1953) has provided new genetic methods not only for the mapping of markers but also for the detection of aberrations, especially translocations (PONTECORVO and =FER 1958; KAFER 1958). Even though most X-ray mutants had been excluded from the general Glasgow stocks, several aberrations have been encountered in the course of mitotic mapping of new markers. The first of these resulted in mitotic linkage between markers of linkage groups I and VII. -
Identification of Genomic Differences Between Laboratory and Commercial
Identification of genomic differences between laboratory and commercial strains of Saccharomyces cerevisiae by Anthony John Heinrich B. Biotech. (Hons) Thesis submitted for the degree of Doctor of Philosophy March 2006 Faculty of Sciences School of Agriculture, Food and Wine Discipline of Wine and Horticulture The University of Adelaide Table of Contents Declaration............................................................................................................................................. i Thesis summary .................................................................................................................................... ii Acknowledgments................................................................................................................................ iv Abbreviations.........................................................................................................................................v CHAPTER 1 Introduction .............................................................................................................1 1.1. INTRODUCTION ....................................................................................................................1 1.2. SIGNAL TRANSDUCTION PATHWAYS ARE ACTIVATED UNDER STRESSFUL CONDITIONS ........2 1.3. THE RESPONSE OF SACCHAROMYCES CEREVISIAE AFTER ENCOUNTERING A STRESSFUL ENVIRONMENT .....................................................................................................................5 1.3.1. Stress related genes........................................................................................................5 -
Microbiology: the Strain in Metagenomics
RESEARCH HIGHLIGHTS MICROBIOLOGY The strain in metagenomics Two computational tools extract strain- His Latent Strain Analysis (LSA) assesses level information from reams of micro- the covariation of short ‘k-mer’ sequences bial sequence data. found in reads, on the basis of a hashing Doctors are well aware that differences function from his search algorithm that between strains of the same bacterial spe- represents all k-mer abundance patterns in cies can have consequences at opposite ends a few gigabytes of fixed memory, regardless of the health-and-disease spectrum. “If you of data size (Cleary et al., 2015). LSA also only look at a species-level annotation, you speeds up the covariation-detection and may end up missing the fact that there are assembly steps. virulence genes in some E. coli strains,” says The advantages are manifold. LSA can Ramnik Xavier of Massachusetts General Stock Photo Alamy discriminate highly related strains, and it Hospital, the Broad Institute and Harvard Microbes from the wild are now being studied at has worked efficiently on four terabytes University. Identifying strains, along with the strain level. of gut microbiome data, whereas other the genetic potential of their genomes, has approaches top out at around 100 gigabytes. become a key goal for computational biolo- tion. Gevers and Xavier say that ConStrains It also found microbes that are missed by gists, but the challenges are compounded shines when it comes to longitudinal stud- traditional assembly because they contrib- by enormous data sets, missing reference ies. The researchers used it to track strains ute few reads to any single sample.