REPORTS Two-Step Synthesis of Carbohydrates
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Electronic Supplementary Information
Electronic Supplementary Material (ESI) for Chemical Science. This journal is © The Royal Society of Chemistry 2019 Electronic Supplementary Information Poly(ionic liquid)s as a Distinct Receptor Material to Create Highly- Integrated Sensing Platform for Efficiently Identifying a Myriad of Saccharides Wanlin Zhang, Yao Li, Yun Liang, Ning Gao, Chengcheng Liu, Shiqiang Wang, Xianpeng Yin, and Guangtao Li* *Corresponding authors: Guangtao Li ([email protected]) S1 Contents 1. Experimental Section (Page S4-S6) Materials and Characterization (Page S4) Experimental Details (Page S4-S6) 2. Figures and Tables (Page S7-S40) Fig. S1 SEM image of silica colloidal crystal spheres and PIL inverse opal spheres. (Page S7) Fig. S2 Adsorption isotherm of PIL inverse opal. (Page S7) Fig. S3 Dynamic mechanical analysis and thermal gravimetric analysis of PIL materials. (Page S7) Fig. S4 Chemical structures of 23 saccharides. (Page S8) Fig. S5 The counteranion exchange of PIL photonic spheres from Br- to DCA. (Page S9) Fig. S6 Reflection and emission spectra of spheres for saccharides. (Page S9) Table S1 The jack-knifed classification on single-sphere array for 23 saccharides. (Page S10) Fig. S7 Lower detection concentration at 10 mM of the single-sphere array. (Page S11) Fig. S8 Lower detection concentration at 1 mM of the single-sphere array. (Page S12) Fig. S9 PIL sphere exhibiting great pH robustness within the biological pH range. (Page S12) Fig. S10 Exploring the tolerance of PIL spheres to different conditions. (Page S13) Fig. S11 Exploring the reusability of PIL spheres. (Page S14) Fig. S12 Responses of spheres to sugar alcohols. (Page S15) Fig. -
Hexose Oxidase from Chondrus Crispus Expressed in Hansenula Polymorpha
Chemical and Technical Assessment 63rdJECFA Hexose Oxidase from Chondrus Crispus expressed in Hansenula Polymorpha CHEMICAL AND TECHNICAL ASSESSMENT (CTA) Prepared by Jim Smith and Zofia Olempska-Beer © FAO 2004 1 Summary Hexose oxidase (HOX) is an enzyme that catalyses the oxidation of C6-sugars to their corresponding lactones. A hexose oxidase enzyme produced from a nonpathogenic and nontoxigenic genetically engineered strain of the yeast Hansenula polymorpha has been developed for use in several food applications. It is encoded by the hexose oxidase gene from the red alga Chondrus crispus that is not known to be pathogenic or toxigenic. C. crispus has a long history of use in food in Asia and is a source of carrageenan used in food as a stabilizer. As this alga is not feasible as a production organism for HOX, Danisco has inserted the HOX gene into the yeast Hansenula polymorpha. The information about this enzyme is provided in a dossier submitted to JECFA by Danisco, Inc. (Danisco, 2003). Based on the hexose oxidase cDNA from C. crispus, a synthetic gene was constructed that is more suitable for expression in yeast. The synthetic gene encodes hexose oxidase with the same amino acid sequence as that of the native C. crispus enzyme. The synthetic gene was combined with regulatory sequences, promoter and terminator derived from H. polymorpha, and inserted into the well-known plasmid pBR322. The URA3 gene from Saccharomyces cerevisiae (Baker’s yeast) and the HARS1 sequence from H. polymorpha were also inserted into the plasmid. The URA3 gene serves as a selectable marker to identify cells containing the transformation vector. -
Analysis of Intact Glycosidic Aroma Precursors in Grapes by High-Performance Liquid Chromatography with a Diode Array Detector
foods Article Analysis of Intact Glycosidic Aroma Precursors in Grapes by High-Performance Liquid Chromatography with a Diode Array Detector Cristina Cebrián-Tarancón 1 , José Oliva 2, Miguel Ángel Cámara 2, Gonzalo L. Alonso 1 and M. Rosario Salinas 1,* 1 Cátedra de Química Agrícola, E.T.S.I. Agrónomos y Montes, Departamento de Ciencia y Tecnología Agroforestal y Genética, Universidad de Castilla-La Mancha, Avda. de España s/n, 02071 Albacete, Spain; [email protected] (C.C.-T.); [email protected] (G.L.A.) 2 Departamento de Química Agrícola, Geología y Edafología, Facultad de Química, Universidad de Murcia, Campus de Espinardo s/n, 30100 Murcia, Spain; [email protected] (J.O.); [email protected] (M.Á.C.) * Correspondence: [email protected]; Tel.: +34-967-599210; Fax: +34-967-599238 Abstract: Nowadays, the techniques for the analysis of glycosidic precursors in grapes involve changes in the glycoside structure or it is necessary the use of very expensive analytical techniques. In this study, we describe for the first time an approach to analyse intact glycosidic aroma precursors in grapes by high-performance liquid chromatography with a diode array detector (HPLC-DAD), a simple and cheap analytical technique that could be used in wineries. Briefly, the skin of Muscat of Alexandria grapes was extracted using a microwave and purified using solid-phase extraction combining Oasis MCX and LiChrolut EN cartridges. In total, 20 compounds were selected by HPLC-DAD at 195 nm and taking as a reference the spectrum of phenyl β-D-glucopyranoside, whose DAD spectrum showed a first shoulder from 190 to 230 nm and a second around 200–360 nm. -
Carbohydrates: Structure and Function
CARBOHYDRATES: STRUCTURE AND FUNCTION Color index: . Very important . Extra Information. “ STOP SAYING I WISH, START SAYING I WILL” 435 Biochemistry Team *هذا العمل ﻻ يغني عن المصدر المذاكرة الرئيسي • The structure of carbohydrates of physiological significance. • The main role of carbohydrates in providing and storing of energy. • The structure and function of glycosaminoglycans. OBJECTIVES: 435 Biochemistry Team extra information that might help you 1-synovial fluid: - It is a viscous, non-Newtonian fluid found in the cavities of synovial joints. - the principal role of synovial fluid is to reduce friction between the articular cartilage of synovial joints during movement O 2- aldehyde = terminal carbonyl group (RCHO) R H 3- ketone = carbonyl group within (inside) the compound (RCOR’) 435 Biochemistry Team the most abundant organic molecules in nature (CH2O)n Carbohydrates Formula *hydrate of carbon* Function 1-provides important part of energy Diseases caused by disorders of in diet . 2-Acts as the storage form of energy carbohydrate metabolism in the body 3-structural component of cell membrane. 1-Diabetesmellitus. 2-Galactosemia. 3-Glycogen storage disease. 4-Lactoseintolerance. 435 Biochemistry Team Classification of carbohydrates monosaccharides disaccharides oligosaccharides polysaccharides simple sugar Two monosaccharides 3-10 sugar units units more than 10 sugar units Joining of 2 monosaccharides No. of carbon atoms Type of carbonyl by O-glycosidic bond: they contain group they contain - Maltose (α-1, 4)= glucose + glucose -Sucrose (α-1,2)= glucose + fructose - Lactose (β-1,4)= glucose+ galactose Homopolysaccharides Heteropolysaccharides Ketone or aldehyde Homo= same type of sugars Hetero= different types Ketose aldose of sugars branched unBranched -Example: - Contains: - Contains: Examples: aldehyde group glycosaminoglycans ketone group. -
Structural Features
1 Structural features As defined by the International Union of Pure and Applied Chemistry gly- cans are structures of multiple monosaccharides linked through glycosidic bonds. The terms sugar and saccharide are synonyms, depending on your preference for Arabic (“sukkar”) or Greek (“sakkēaron”). Saccharide is the root for monosaccha- rides (a single carbohydrate unit), oligosaccharides (3 to 20 units) and polysac- charides (large polymers of more than 20 units). Carbohydrates follow the basic formula (CH2O)N>2. Glycolaldehyde (CH2O)2 would be the simplest member of the family if molecules of two C-atoms were not excluded from the biochemical repertoire. Glycolaldehyde has been found in space in cosmic dust surrounding star-forming regions of the Milky Way galaxy. Glycolaldehyde is a precursor of several organic molecules. For example, reaction of glycolaldehyde with propenal, another interstellar molecule, yields ribose, a carbohydrate that is also the backbone of nucleic acids. Figure 1 – The Rho Ophiuchi star-forming region is shown in infrared light as captured by NASA’s Wide-field Infrared Explorer. Glycolaldehyde was identified in the gas surrounding the star-forming region IRAS 16293-2422, which is is the red object in the centre of the marked square. This star-forming region is 26’000 light-years away from Earth. Glycolaldehyde can react with propenal to form ribose. Image source: www.eso.org/public/images/eso1234a/ Beginning the count at three carbon atoms, glyceraldehyde and dihydroxy- acetone share the common chemical formula (CH2O)3 and represent the smallest carbohydrates. As their names imply, glyceraldehyde has an aldehyde group (at C1) and dihydoxyacetone a carbonyl group (at C2). -
406-3 Wood Sugars.Pdf
Wood Chemistry Wood Chemistry Wood Carbohydrates l Major Components Wood Chemistry » Hexoses – D-Glucose, D-Galactose, D-Mannose PSE 406/Chem E 470 » Pentoses – D-Xylose, L-Arabinose Lecture 3 » Uronic Acids Wood Sugars – D-glucuronic Acid, D Galacturonic Acid l Minor Components » 2 Deoxy Sugars – L-Rhamnose, L-Fucose PSE 406 - Lecture 3 1 PSE 406 - Lecture 3 2 Wood Chemistry Wood Sugars: L Arabinose Wood Chemistry Wood Sugars: D Xylose l Pentose (5 carbons) CHO l Pentose CHO l Of the big 5 wood sugars, l Xylose is the major constituent of H OH arabinose is the only one xylans (a class of hemicelluloses). H OH found in the L form. » 3-8% of softwoods HO H HO H l Arabinose is a minor wood » 15-25% of hardwoods sugar (0.5-1.5% of wood). HO H H OH CH OH 2 CH2OH PSE 406 - Lecture 3 3 PSE 406 - Lecture 3 4 1 1 Wood Chemistry Wood Sugars: D Mannose Wood Chemistry Wood Sugars: D Glucose CHO l Hexose (6 carbons) CHO l Hexose (6 carbons) l Glucose is the by far the most H OH l Mannose is the major HO H constituent of Mannans (a abundant wood monosaccharide (cellulose). A small amount can HO H class of hemicelluloses). HO H also be found in the » 7-13% of softwoods hemicelluloses (glucomannans) H OH » 1-4% of hardwoods H OH H OH H OH CH2OH CH2OH PSE 406 - Lecture 3 5 PSE 406 - Lecture 3 6 Wood Chemistry Wood Sugars: D Galactose Wood Chemistry Wood Sugars CHO CHO l Hexose (6 carbons) CHO H OH H OH l Galactose is a minor wood D Xylose L Arabinose HO H HO H monosaccharide found in H OH HO H H OH certain hemicelluloses CH2OH HO H CHO CH2OH CHO CHO » 1-6% of softwoods HO H H OH H OH » 1-1.5% of hardwoods HO H HO H HO H HO H HO H H OH H OH H OH H OH H OH H OH CH2OH CH2OH CH2OH CH2OH D Mannose D Glucose D Galactose PSE 406 - Lecture 3 7 PSE 406 - Lecture 3 8 2 2 Wood Chemistry Sugar Numbering System Wood Chemistry Uronic Acids CHO 1 CHO l Aldoses are numbered l Uronic acids are with the structure drawn HO H 2 polyhydroxy carboxylic H OH vertically starting from the aldehydes. -
WO 2013/070444 Al 16 May 2013 (16.05.2013) W P O P C T
(12) INTERNATIONAL APPLICATION PUBLISHED UNDER THE PATENT COOPERATION TREATY (PCT) (19) World Intellectual Property Organization International Bureau (10) International Publication Number (43) International Publication Date WO 2013/070444 Al 16 May 2013 (16.05.2013) W P O P C T (51) International Patent Classification: (81) Designated States (unless otherwise indicated, for every A23G 4/00 (2006.01) kind of national protection available): AE, AG, AL, AM, AO, AT, AU, AZ, BA, BB, BG, BH, BN, BR, BW, BY, (21) International Application Number: BZ, CA, CH, CL, CN, CO, CR, CU, CZ, DE, DK, DM, PCT/US20 12/062043 DO, DZ, EC, EE, EG, ES, FI, GB, GD, GE, GH, GM, GT, (22) International Filing Date: HN, HR, HU, ID, IL, IN, IS, JP, KE, KG, KM, KN, KP, 26 October 2012 (26.10.2012) KR, KZ, LA, LC, LK, LR, LS, LT, LU, LY, MA, MD, ME, MG, MK, MN, MW, MX, MY, MZ, NA, NG, NI, (25) Filing Language: English NO, NZ, OM, PA, PE, PG, PH, PL, PT, QA, RO, RS, RU, (26) Publication Language: English RW, SC, SD, SE, SG, SK, SL, SM, ST, SV, SY, TH, TJ, TM, TN, TR, TT, TZ, UA, UG, US, UZ, VC, VN, ZA, (30) Priority Data: ZM, ZW. 61/556,546 7 November 20 11 (07. 11.201 1) US (84) Designated States (unless otherwise indicated, for every (71) Applicant (for all designated States except US): WVI. kind of regional protection available): ARIPO (BW, GH, WRIGLEY JR. COMPANY [US/US]; 1132 Blackhawk GM, KE, LR, LS, MW, MZ, NA, RW, SD, SL, SZ, TZ, Street, Chicago, IL 60642 (US). -
Monosaccharides: a Tof-SIMS Reference Accession #: 01592, 01593, 01594, 01595, 01596, 01597, 01598, Spectra Database
Monosaccharides: A ToF-SIMS reference Accession #: 01592, 01593, 01594, 01595, 01596, 01597, 01598, spectra database. II. Positive polarity 01599, 01600, 01601, 01602, a) 01603, 01604, 01605, 01606, Laetitia Bernard, Rowena Crockett, and Maciej Kawecki 01607, 01608, 01609, 01610 Laboratory of Nanoscale Materials Science, Empa, CH-8600 Dübendorf, Switzerland Technique: SIMS (Received 20 August 2019; accepted 30 October 2019; published 3 December 2019) Host Material: Silicon (100) wafer The number of time-of-flight secondary ion mass spectrometry studies on biological tissues and Instrument: IONTOF TOF-SIMS.5 cells has strongly increased since the development of primary ion sources that allow not only ele- Major Species in Spectra: C, H, O, (N) mental but also molecular analysis. Substantial fragmentation during ionic bombardment results in a Minor Species in Spectra: Na, K large number of peaks, rendering data analysis complex. Complete and trustable sets of reference spectra for the main biological building blocks, i.e., amino acids, monosaccharides, fatty acids, and Published Spectra: 19 nucleotides, are required. This work aims to provide an accurate and extensive library of reference Spectra in Electronic Record: 19 + spectra for monosaccharides, measured with the Bi3 primary ion. Here (Paper II), the positive polar- Published Figures: 20 ity spectra and lists of associated characteristic fragments are presented. Published by the AVS. Spectral Category: Reference https://doi.org/10.1116/1.5125103 Keywords: ToF-SIMS, carbohydrate, sugar, monosaccharide, mass spectrometry, fragmentation INTRODUCTION Fluka and all others from Sigma Aldrich. Each powder was dissolved in freshly de-ionized H2O (resistivity >18.2 MΩ cm) Monosaccharides are the building blocks of structural polymers at a concentration of 0.1M. -
2 Alternative Carbohydrate Reserves Used in the Daily Cycle of Crassulacean Acid Metabolism
2 Alternative Carbohydrate Reserves Used in the Daily Cycle of Crassulacean Acid Metabolism CC. BLACK, J.-Q. CHEN, ILL,. DOONG, M.N. AN(;EI.OV, illld S.J.S. SUN<; 2.1 Introduction Each day a massive interlocked biochemical cycle occurs in the Greta 1 issllcs of crassulacean acid metabolism plants. The function of this interlocked l,t::ee, in its simplest context, is to furnish most ofthe CO, for (‘AM plant photosynthesis. In addition, this diel (24 h) cycle produces the primary identifying marks of a ( ‘AM tissue through two ancillary cycles. One cycle involves a noctllrnal acitlific~ittiou and its loss the next day, while the second concerns the depletion of a carl>ohy- drate reserve at night and its replenishment the next day. Formally IIeniamiu Heyne (18 1s) is credited with writing, nearly two centuries ago, about I~IC “at,id as sorrel” taste of a succulent green plant at dawn and the “bland taste” causttcl by acidity loss later in the day. In fact, the exact origins of I hese observaliorls art‘ lost in antiquity, but certainly are referred to in Roman and Biblical wrilings The circumstantial cause of the acidity was postulated to be an organic acid aboul a century ago and the bland taste later was associated with starch; but ~hrse idr;ls were not plainly coupled together in theory nor quantitatively studietl lentil the late 1940s. Then, with the discovery of major portions of intermediary mr~al~- olism and the advent of additional quantitative biochemical procetlrlres. 111e nature of the daily reciprocal relation between the acid and the bland tastt* was recognized and measured quantitatively. -
25 05.Html.Ppt [Read-Only]
25.5 A Mnemonic for Carbohydrate Configurations The Eight D-Aldohexoses CH O H OH CH2OH The Eight D-Aldohexoses All CH O Altruists Gladly Make Gum In H OH Gallon CH2OH Tanks The Eight D-Aldohexoses All Allose CH O Altruists Altrose Gladly Glucose Make Mannose Gum Gulose In Idose H OH Gallon Galactose CH2OH Tanks Talose The Eight D-Aldohexoses Allose CH O Altrose Glucose Mannose Gulose Idose H OH Galactose CH2OH Talose The Eight D-Aldohexoses Allose CH O Altrose Glucose Mannose Gulose H OH Idose H OH Galactose CH2OH Talose The Eight D-Aldohexoses Allose CH O Altrose Glucose Mannose Gulose HO H Idose H OH Galactose CH2OH Talose The Eight D-Aldohexoses Allose CH O Altrose Glucose Mannose Gulose H OH Idose H OH Galactose CH2OH Talose The Eight D-Aldohexoses Allose CH O Altrose Glucose Mannose H OH Gulose H OH Idose H OH Galactose CH2OH Talose The Eight D-Aldohexoses Allose CH O Altrose Glucose Mannose HO H Gulose H OH Idose H OH Galactose CH2OH Talose The Eight D-Aldohexoses Allose CH O Altrose Glucose Mannose Gulose HO H Idose H OH Galactose CH2OH Talose The Eight D-Aldohexoses Allose CH O Altrose Glucose Mannose H OH Gulose HO H Idose H OH Galactose CH2OH Talose The Eight D-Aldohexoses Allose CH O Altrose Glucose Mannose HO H Gulose HO H Idose H OH Galactose CH2OH Talose The Eight D-Aldohexoses Allose CH O Altrose Glucose Mannose H OH Gulose H OH Idose H OH Galactose CH2OH Talose The Eight D-Aldohexoses Allose CH O Altrose Glucose H OH Mannose H OH Gulose H OH Idose H OH Galactose CH2OH Talose The Eight D-Aldohexoses Allose CH O Altrose -
The Role of Hexokinase and Hexose Transporters in Preferential Use of Glucose Over Fructose and Downstream Metabolic Pathways in the Yeast Yarrowia Lipolytica
International Journal of Molecular Sciences Article The Role of Hexokinase and Hexose Transporters in Preferential Use of Glucose over Fructose and Downstream Metabolic Pathways in the Yeast Yarrowia lipolytica Piotr Hapeta 1 , Patrycja Szczepa ´nska 1, Tadeusz Witkowski 1, Jean-Marc Nicaud 2 , Anne-Marie Crutz-Le Coq 2 and Zbigniew Lazar 1,* 1 Department of Biotechnology and Food Microbiology, Wrocław University of Environmental and Life Sciences, Chełmo´nskiegoStreet 37, 51-630 Wrocław, Poland; [email protected] (P.H.); [email protected] (P.S.); [email protected] (T.W.) 2 Université Paris-Saclay, INRAE, AgroParisTech, Micalis Institute, 78352 Jouy-en-Josas, France; [email protected] (J.-M.N.); [email protected] (A.-M.C.-L.C.) * Correspondence: [email protected] Abstract: The development of efficient bioprocesses requires inexpensive and renewable substrates. Molasses, a by-product of the sugar industry, contains mostly sucrose, a disaccharide composed of glucose and fructose, both easily absorbed by microorganisms. Yarrowia lipolytica, a platform for the production of various chemicals, can be engineered for sucrose utilization by heterologous invertase expression, yet the problem of preferential use of glucose over fructose remains, as fructose consumption begins only after glucose depletion what significantly extends the bioprocesses. We Citation: Hapeta, P.; Szczepa´nska,P.; investigated the role of hexose transporters and hexokinase (native and fructophilic) in this prefer- Witkowski, T.; Nicaud, J.-M.; ence. Analysis of growth profiles and kinetics of monosaccharide utilization has proven that the Crutz-Le Coq, A.-M.; Lazar, Z. The glucose preference in Y. -
United States Patent (19 11) 4,312,979 Takemoto Et Al
United States Patent (19 11) 4,312,979 Takemoto et al. 45 Jan. 26, 1982 54 POLYSACCHARIDES CONTAINING 58) Field of Search ......................... 536/1, 18, 114, 4; ALLOSE 435/101 (75) Inventors: Hisao Takemoto; Tatsuo Igarashi, (56) References Cited both of Shin-Nanyo, Japan U.S. PATENT DOCUMENTS 73 Assignee: Toyo Soda Manufacturing Co., Ltd., 3,711,462 l/1973 Abdo et al. ............................. 536/1 Tokyo, Japan 4,186,025 l/1980 Kang et al. ............................. 536/1 Primary Examiner-Johnnie R. Brown (21) Appl. No.: 30,444 Attorney, Agent, or Firm-Scully, Scott, Murphy & Presser 22 Filed: Apr. 16, 1979 57 ABSTRACT 30 Foreign Application Priority Data A new polysaccharide including allose as a constituent Apr. 20, 1978 JP Japan .................................. 53.45918 sugar and further characterized by galactose as a major Dec. 5, 1978 JP Japan ................................ 53-149715 constituent sugar is described. The polysaccharide is produced extracellularly by cultivation of Pseudomonas 51) Int. Cl. ............................................... CO7H1/08 viscogena strains in nutrient medium. 52 U.S. C. ...... 0 a a 4 536/1; 435/72; 435/101; 536/114 6 Claims, 2 Drawing Figures U.S. Patent Jan. 26, 1982 Sheet 1 of 2 4,312,979 8 O O Sn Cd O ar - O - 3 CD won L Cd O CO ve O Cd Cd cN O O O N O O o O o O O. d o o O a. 3 c) do N. ud to at Y on 9 (%) AONWLLIWSNW U.S. Patent Jan. 26, 1982 Sheet 2 of 2 4,312,979 3 s 8 un co, t OO O) O S s S 8 & O O O O O r ONWSOS9W 4,312,979 1.