<I>Fagus Grandifolia</I>
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Preliminary Classification of Leotiomycetes
Mycosphere 10(1): 310–489 (2019) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/10/1/7 Preliminary classification of Leotiomycetes Ekanayaka AH1,2, Hyde KD1,2, Gentekaki E2,3, McKenzie EHC4, Zhao Q1,*, Bulgakov TS5, Camporesi E6,7 1Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, Kunming 650201, Yunnan, China 2Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai, 57100, Thailand 3School of Science, Mae Fah Luang University, Chiang Rai, 57100, Thailand 4Landcare Research Manaaki Whenua, Private Bag 92170, Auckland, New Zealand 5Russian Research Institute of Floriculture and Subtropical Crops, 2/28 Yana Fabritsiusa Street, Sochi 354002, Krasnodar region, Russia 6A.M.B. Gruppo Micologico Forlivese “Antonio Cicognani”, Via Roma 18, Forlì, Italy. 7A.M.B. Circolo Micologico “Giovanni Carini”, C.P. 314 Brescia, Italy. Ekanayaka AH, Hyde KD, Gentekaki E, McKenzie EHC, Zhao Q, Bulgakov TS, Camporesi E 2019 – Preliminary classification of Leotiomycetes. Mycosphere 10(1), 310–489, Doi 10.5943/mycosphere/10/1/7 Abstract Leotiomycetes is regarded as the inoperculate class of discomycetes within the phylum Ascomycota. Taxa are mainly characterized by asci with a simple pore blueing in Melzer’s reagent, although some taxa have lost this character. The monophyly of this class has been verified in several recent molecular studies. However, circumscription of the orders, families and generic level delimitation are still unsettled. This paper provides a modified backbone tree for the class Leotiomycetes based on phylogenetic analysis of combined ITS, LSU, SSU, TEF, and RPB2 loci. In the phylogenetic analysis, Leotiomycetes separates into 19 clades, which can be recognized as orders and order-level clades. -
Diseases of Trees in the Great Plains
United States Department of Agriculture Diseases of Trees in the Great Plains Forest Rocky Mountain General Technical Service Research Station Report RMRS-GTR-335 November 2016 Bergdahl, Aaron D.; Hill, Alison, tech. coords. 2016. Diseases of trees in the Great Plains. Gen. Tech. Rep. RMRS-GTR-335. Fort Collins, CO: U.S. Department of Agriculture, Forest Service, Rocky Mountain Research Station. 229 p. Abstract Hosts, distribution, symptoms and signs, disease cycle, and management strategies are described for 84 hardwood and 32 conifer diseases in 56 chapters. Color illustrations are provided to aid in accurate diagnosis. A glossary of technical terms and indexes to hosts and pathogens also are included. Keywords: Tree diseases, forest pathology, Great Plains, forest and tree health, windbreaks. Cover photos by: James A. Walla (top left), Laurie J. Stepanek (top right), David Leatherman (middle left), Aaron D. Bergdahl (middle right), James T. Blodgett (bottom left) and Laurie J. Stepanek (bottom right). To learn more about RMRS publications or search our online titles: www.fs.fed.us/rm/publications www.treesearch.fs.fed.us/ Background This technical report provides a guide to assist arborists, landowners, woody plant pest management specialists, foresters, and plant pathologists in the diagnosis and control of tree diseases encountered in the Great Plains. It contains 56 chapters on tree diseases prepared by 27 authors, and emphasizes disease situations as observed in the 10 states of the Great Plains: Colorado, Kansas, Montana, Nebraska, New Mexico, North Dakota, Oklahoma, South Dakota, Texas, and Wyoming. The need for an updated tree disease guide for the Great Plains has been recog- nized for some time and an account of the history of this publication is provided here. -
Mykologische Untersuchungen in Naturwaldresten Bei Ferlach (Kärnten, Österreich) 449-492 © Naturwissenschaftlicher Verein Für Kärnten, Download
ZOBODAT - www.zobodat.at Zoologisch-Botanische Datenbank/Zoological-Botanical Database Digitale Literatur/Digital Literature Zeitschrift/Journal: Carinthia II Jahr/Year: 2017 Band/Volume: 207_127 Autor(en)/Author(s): Friebes Gernot Artikel/Article: Mykologische Untersuchungen in Naturwaldresten bei Ferlach (Kärnten, Österreich) 449-492 © Naturwissenschaftlicher Verein für Kärnten, download www.zobodat.at Carinthia II n 207./127. Jahrgang n Seiten 449–492 n Klagenfurt 2017 449 Mykologische Untersuchungen in Naturwaldresten bei Ferlach (Kärnten, Österreich) Von Gernot FRIEBES Zusammenfassung Schlüsselwörter Im Jahr 2016 wurden die Pilze eines Naturwaldrestes und dreier naturnaher Basidiomycota, Waldbereiche am Osthang des Ferlacher Horns (Waidisch bei Ferlach, Kärnten, Öster- Ascomycota, reich) erfasst. Die ausgewählten Gebiete zeichnen sich insbesondere durch natür- Kärnten, liche, abwechslungsreiche Baumbestände und großen Totholzreichtum aus. Der Karawanken, Schwerpunkt der Untersuchungen lag auf lignicolen und Ektomykorrhiza bildenden Ferlacher Horn, Pilzarten. In die Kartierungsliste flossen auch die Ergebnisse einiger Exkursionen in Urwald, Diversität, den vorangegangenen Jahren ein. Insgesamt konnten im Gebiet 400 Arten (inkl. Vari- Ökologie etäten und Formen) registriert werden. Eine bislang noch unbeschriebene Orbilia-Art ist weltweit nur aus dem Naturschutzgebiet Karlschütt (Steiermark) und dem Unter- Keywords suchungsgebiet in Waidisch bekannt. Ebenfalls neu für die Wissenschaft ist eine basidiomycota, Acremonium-Art, die auf -
Helotiales, Hyaloscyphaceae) from Tropical China and a Key to the Known Species of the Genus
Nova Hedwigia 73 1—2 261—267 Stuttgart, August 2001 Two new species of Perrotia (Helotiales, Hyaloscyphaceae) from tropical China and a key to the known species of the genus by Wen-Ying Zhuang* and Zhi-He Yu Systematic Mycology and Lichenology Laboratory, Institute of Microbiology Chinese Academy of Sciences, Beijing 100080, China With 9 figures Zhuang, W.-Y. & Z.-H. Yu (2001): Two new species of Perrotia (Helotiales, Hyaloscyphaceae) from tropical China and a key to the known species of the genus. - Nova Hedwigia 73: 261-267. Abstract: Two new species of Perrotia with septate ascospores are described from tropical Yunnan, China. The new taxa are compared with related fungi. A key to the accepted species of Perrotia is provided. Key words: Perrotia pilifera, Perrotia yunnanensis, Yunnan Introduction Perrotia Boud. was established a century ago (Boudier 1901). The genus is typified by P. flammea (Fr.) Boud. and characterized by sessile to short-stipitate apothecia, thick-walled hairs with incrusted to granulate walls, clavate asci with a rounded and non-amyloid apex, cylindrical, allantoid, fusoid, ellipsoid, broadly ellipsoid, vermiform to aciculate ascospores which are aseptate to multiseptate, and subcylindrical or occasionally lanceolate paraphyses with an obtuse apex. The genus is cosmopolitan and occurs mostly on woody substrata (bark, twigs, and decorticated wood), very rarely on culms of gramineous plants and leaves of dicotyledons. Taxonomic studies of the genus were carried out by many authors (Dennis 1958, 1961, 1962, 1963, Gamundi 1987, Haines 1989, Haines & McKnight 1977, Raitviir 1970, Spooner 1987, Wang & Haines 1999, Zhuang & Hyde 2001). Eighteen species have so far been recognized, of which four have been found in China. -
<I>Coccomyces</I> (<I>Rhytismatales</I>, <I>Ascomycota</I>)
ISSN (print) 0093-4666 © 2011. Mycotaxon, Ltd. ISSN (online) 2154-8889 MYCOTAXON http://dx.doi.org/10.5248/118.231 Volume 118, pp. 231–235 October–December 2011 A new species of Coccomyces (Rhytismatales, Ascomycota) from Mt Huangshan, China Guo-Jun Jia1, Ying-Ren Lin2* & Cheng-Lin Hou3 1 School of Life Science & 2 School of Forestry & Landscape Architecture, Anhui Agricultural University, West Changjiang Road 130, Hefei, Anhui 230036, China 3 College of Life Science, Capital Normal University, Xisanhuanbeilu 105, Haidian, Beijing 100048, China *Correspondence to: [email protected] Abstract—A fungus found on leaves of Osmanthus fragrans from Mt Huangshan in Anhui Province, China, is described as Coccomyces minimus. The new species is similar to C. cyclobalanopsis but differs in the extremely small, subepidermal ascomata and in the presence of conidiomata. The type specimen is deposited in the Forest Fungi Dried Reference Collection of Anhui Agricultural University, China (AAUF). Both illustration and comments accompany the description. Key words—taxonomy, Rhytismataceae, Oleaceae Introduction Coccomyces De Not. is the second-largest genus in the Rhytismataceae (Rhytismatales, Leotiomycetes, Ascomycota) (Kirk et al. 2008). Members of this genus are characterized by polygonal to more or less circular ascomata opening by several radiate or irregular splits, cylindrical to clavate asci, and filiform to fusiform ascospores, oftenwith gelatinous sheaths (Sherwood 1980; Cannon & Minter 1986; Johnston 1986, 2000; Spooner 1990; Lin et al. 1994). Of the 116 Coccomyces species known worldwide (Kirk et al. 2008), 23 have been reported from China (Korf & Zhuang 1985; Lin 1998; Hou et al. 2006, 2007). They are widely distributed and inhabit leaves, twigs, bark, or wood of vascular plants, especially Ericaceae, Fagaceae, and Lauraceae (Sherwood 1980). -
Myconet Volume 14 Part One. Outine of Ascomycota – 2009 Part Two
(topsheet) Myconet Volume 14 Part One. Outine of Ascomycota – 2009 Part Two. Notes on ascomycete systematics. Nos. 4751 – 5113. Fieldiana, Botany H. Thorsten Lumbsch Dept. of Botany Field Museum 1400 S. Lake Shore Dr. Chicago, IL 60605 (312) 665-7881 fax: 312-665-7158 e-mail: [email protected] Sabine M. Huhndorf Dept. of Botany Field Museum 1400 S. Lake Shore Dr. Chicago, IL 60605 (312) 665-7855 fax: 312-665-7158 e-mail: [email protected] 1 (cover page) FIELDIANA Botany NEW SERIES NO 00 Myconet Volume 14 Part One. Outine of Ascomycota – 2009 Part Two. Notes on ascomycete systematics. Nos. 4751 – 5113 H. Thorsten Lumbsch Sabine M. Huhndorf [Date] Publication 0000 PUBLISHED BY THE FIELD MUSEUM OF NATURAL HISTORY 2 Table of Contents Abstract Part One. Outline of Ascomycota - 2009 Introduction Literature Cited Index to Ascomycota Subphylum Taphrinomycotina Class Neolectomycetes Class Pneumocystidomycetes Class Schizosaccharomycetes Class Taphrinomycetes Subphylum Saccharomycotina Class Saccharomycetes Subphylum Pezizomycotina Class Arthoniomycetes Class Dothideomycetes Subclass Dothideomycetidae Subclass Pleosporomycetidae Dothideomycetes incertae sedis: orders, families, genera Class Eurotiomycetes Subclass Chaetothyriomycetidae Subclass Eurotiomycetidae Subclass Mycocaliciomycetidae Class Geoglossomycetes Class Laboulbeniomycetes Class Lecanoromycetes Subclass Acarosporomycetidae Subclass Lecanoromycetidae Subclass Ostropomycetidae 3 Lecanoromycetes incertae sedis: orders, genera Class Leotiomycetes Leotiomycetes incertae sedis: families, genera Class Lichinomycetes Class Orbiliomycetes Class Pezizomycetes Class Sordariomycetes Subclass Hypocreomycetidae Subclass Sordariomycetidae Subclass Xylariomycetidae Sordariomycetes incertae sedis: orders, families, genera Pezizomycotina incertae sedis: orders, families Part Two. Notes on ascomycete systematics. Nos. 4751 – 5113 Introduction Literature Cited 4 Abstract Part One presents the current classification that includes all accepted genera and higher taxa above the generic level in the phylum Ascomycota. -
Fungal Endophytes in a Seed-Free Host: New Species That Demonstrate Unique Community Dynamics
Portland State University PDXScholar Dissertations and Theses Dissertations and Theses Spring 5-23-2018 Fungal Endophytes in a Seed-Free Host: New Species that Demonstrate Unique Community Dynamics Brett Steven Younginger Portland State University Follow this and additional works at: https://pdxscholar.library.pdx.edu/open_access_etds Part of the Biology Commons, and the Fungi Commons Let us know how access to this document benefits ou.y Recommended Citation Younginger, Brett Steven, "Fungal Endophytes in a Seed-Free Host: New Species that Demonstrate Unique Community Dynamics" (2018). Dissertations and Theses. Paper 4387. https://doi.org/10.15760/etd.6271 This Dissertation is brought to you for free and open access. It has been accepted for inclusion in Dissertations and Theses by an authorized administrator of PDXScholar. Please contact us if we can make this document more accessible: [email protected]. Fungal Endophytes in a Seed-Free Host: New Species That Demonstrate Unique Community Dynamics by Brett Steven Younginger A dissertation submitted in partial fulfillment of the requirements for the degree of Doctor of Philosophy in Biology Dissertation Committee: Daniel J. Ballhorn, Chair Mitchell B. Cruzan Todd N. Rosenstiel John G. Bishop Catherine E. de Rivera Portland State University 2018 © 2018 Brett Steven Younginger Abstract Fungal endophytes are highly diverse, cryptic plant endosymbionts that form asymptomatic infections within host tissue. They represent a large fraction of the millions of undescribed fungal taxa on our planet with some demonstrating mutualistic benefits to their hosts including herbivore and pathogen defense and abiotic stress tolerance. Other endophytes are latent saprotrophs or pathogens, awaiting host plant senescence to begin alternative stages of their life cycles. -
Dothideomycetes and Leotiomycetes Sterile Mycelia
Gnavi et al. SpringerPlus 2014, 3:508 http://www.springerplus.com/content/3/1/508 a SpringerOpen Journal RESEARCH Open Access Dothideomycetes and Leotiomycetes sterile mycelia isolated from the Italian seagrass Posidonia oceanica based on rDNA data Giorgio Gnavi1, Enrico Ercole2, Luigi Panno1, Alfredo Vizzini2 and Giovanna C Varese1* Abstract Marine fungi represent a group of organisms extremely important from an ecological and biotechnological point of view, but often still neglected. In this work, an in-depth analysis on the systematic and the phylogenetic position of 21 sterile mycelia, isolated from Posidonia oceanica, was performed. The molecular (ITS and LSU sequences) analysis showed that several of them are putative new species belonging to three orders in the Ascomycota phylum: Pleosporales, Capnodiales and Helotiales. Phylogenetic analyses were performed using Bayesian Inference and Maximum Likelihood approaches. Seven sterile mycelia belong to the genera firstly reported from marine environments. The bioinformatic analysis allowed to identify five sterile mycelia at species level and nine at genus level. Some of the analyzed sterile mycelia could belong to new lineages of marine fungi. Keywords: Dothideomycetes; Fungal molecular phylogeny; Leotiomycetes; Marine fungi; Posidonia oceanica; Sterile mycelia Background metabolites that often display promising biological and The oceans host a vast biodiversity. Most of the marine pharmacological properties (Rateb and Ebel 2011) and the microbial biodiversity has not yet been discovered and remarkably high hit rates of marine compounds in screen- characterized, both taxonomically and biochemically. ing for drug leads makes the search in marine organisms Marine fungal strains have been obtained from virtually quite attractive. every possible marine habitat, including inorganic matter, In our previous work (Panno et al. -
Science Review 2013
Science Review 2013 Research using data accessed through the Global Biodiversity Information Facility Foreword When surveying the growing number of papers making use of GBIF-mobilized data, one thing that is striking is the breadth of geographic, temporal, and taxonomic scale these studies cover. GBIF-mobilized data is relevant to surveying county- level populations of velvet ants in Oklahoma, to predicting the impact of climate change on the distribution of invasive species, and to determining the extent to which humanity has made innovative uses of the biosphere as measured by the biodiversity of patent applications. All of these applications rely on both the quality and quantity of the data that are available to biodiversity researchers. Within the wider scientific community the theme of data citation is gaining wider prominence, both as a means to give credit to those who create and curate data, and to track the provenance of data as they are used (and re-used). Many of the papers listed in this report come with Digital Object Identifiers (DOIs) that uniquely identify each publication, which facilitates tracking the use of each paper (for example through citations by other publications, or other venues such as online discussions and social media). Initiatives to encourage ‘data papers’ in online journals, such as those produced by Pensoft Publishers (see p41), are associating DOIs with data, so that data no longer are the poor cousins of standard research papers. One thing I look forward to is seeing DOIs attached directly to GBIF-mobilized data, so that we can begin to track the use of the data with greater fidelity, providing valuable feedback to those who have seen the value of GBIF and have contributed to GBIF’s effort to enable free and open access to biodiversity data. -
<I>Coccomyces Hubeiensis</I>, a New Fungus Of
ISSN (print) 0093-4666 © 2012. Mycotaxon, Ltd. ISSN (online) 2154-8889 MYCOTAXON http://dx.doi.org/10.5248/122.249 Volume 122, pp. 249–253 October–December 2012 Coccomyces hubeiensis, a new fungus of Rhytismatales from China Meng-Shi Yang1, Ying-Ren Lin2*, Lan Zhang1 & Xiao-Yan Wang1 1 School of Life Science & 2 School of Forestry & Landscape Architecture, Anhui Agricultural University, West Changjiang Road 130, Hefei, Anhui 230036, China *Correspondence to: [email protected] Abstract —A new fungus found on fallen leaves of Rhododendron erubescens from the Shennongjia forestry region of Hubei Province, China, is described as Coccomyces hubeiensis. This species differs from C. dentatus by its asci with subtruncate-conical apices, paraphyses branched near the top, infrequent zone lines, and the absence of conidiomata. The type specimen is deposited in the Reference Collection of Forest Fungi of Anhui Agricultural University, China (AAUF). Key words —Rhytismataceae, morphology, Ericaceae Introduction Coccomyces De Not., established by de Notaris in 1847, is now placed in the Rhytismatales (Leotiomycetes, Ascomycota) (Kirk et al. 2008). Coccomyces taxa are characterized by polygonal or more or less circular ascomata that open by several radiate or irregular splits, cylindrical to clavate asci, and filiform, long- fusiform, or clavate ascospores, often with gelatinous sheaths (Sherwood 1980; Cannon & Minter 1986; Johnston 1986, 2000; Spooner 1990; Lin et al. 1994; Jia et al. 2012). External shape, size, and ascomal openings, ascal shape and size, and the shape of paraphyses at the apex are regarded as the most important taxonomic characters (Johnston 1986; Lin 1998). Twenty-five Coccomyces species have been reported in China (Korf & Zhuang 1985; Lin 1998; Hou et al. -
Mycosphere Notes 169–224 Article
Mycosphere 9(2): 271–430 (2018) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/9/2/8 Copyright © Guizhou Academy of Agricultural Sciences Mycosphere notes 169–224 Hyde KD1,2, Chaiwan N2, Norphanphoun C2,6, Boonmee S2, Camporesi E3,4, Chethana KWT2,13, Dayarathne MC1,2, de Silva NI1,2,8, Dissanayake AJ2, Ekanayaka AH2, Hongsanan S2, Huang SK1,2,6, Jayasiri SC1,2, Jayawardena RS2, Jiang HB1,2, Karunarathna A1,2,12, Lin CG2, Liu JK7,16, Liu NG2,15,16, Lu YZ2,6, Luo ZL2,11, Maharachchimbura SSN14, Manawasinghe IS2,13, Pem D2, Perera RH2,16, Phukhamsakda C2, Samarakoon MC2,8, Senwanna C2,12, Shang QJ2, Tennakoon DS1,2,17, Thambugala KM2, Tibpromma, S2, Wanasinghe DN1,2, Xiao YP2,6, Yang J2,16, Zeng XY2,6, Zhang JF2,15, Zhang SN2,12,16, Bulgakov TS18, Bhat DJ20, Cheewangkoon R12, Goh TK17, Jones EBG21, Kang JC6, Jeewon R19, Liu ZY16, Lumyong S8,9, Kuo CH17, McKenzie EHC10, Wen TC6, Yan JY13, Zhao Q2 1 Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, P.R. China 2 Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand 3 A.M.B. Gruppo Micologico Forlivese ‘‘Antonio Cicognani’’, Via Roma 18, Forlı`, Italy 4 A.M.B. Circolo Micologico ‘‘Giovanni Carini’’, C.P. 314, Brescia, Italy 5 Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Science, Kunming 650201, Yunnan, P.R. China 6 Engineering and Research Center for Southwest Bio-Pharmaceutical Resources of national education Ministry of Education, Guizhou University, Guiyang, Guizhou Province 550025, P.R. -
Downloaded from Mycoportal (2020)
Provided for non-commercial research and educational use. Not for reproduction, distribution or commercial use. This article was originally published in the Encyclopedia of Mycology published by Elsevier, and the attached copy is provided by Elsevier for the author's benefit and for the benefit of the author's institution, for non-commercial research and educational use, including without limitation, use in instruction at your institution, sending it to specific colleagues who you know, and providing a copy to your institution's administrator. All other uses, reproduction and distribution, including without limitation, commercial reprints, selling or licensing copies or access, or posting on open internet sites, your personal or institution's website or repository, are prohibited. For exceptions, permission may be sought for such use through Elsevier's permissions site at: https://www.elsevier.com/about/policies/copyright/permissions Quandt, C. Alisha and Haelewaters, Danny (2021) Phylogenetic Advances in Leotiomycetes, an Understudied Clade of Taxonomically and Ecologically Diverse Fungi. In: Zaragoza, O. (ed) Encyclopedia of Mycology. vol. 1, pp. 284–294. Oxford: Elsevier. http://dx.doi.org/10.1016/B978-0-12-819990-9.00052-4 © 2021 Elsevier Inc. All rights reserved. Author's personal copy Phylogenetic Advances in Leotiomycetes, an Understudied Clade of Taxonomically and Ecologically Diverse Fungi C Alisha Quandt, University of Colorado, Boulder, CO, United States Danny Haelewaters, Purdue University, West Lafayette, IN, United States; Ghent University, Ghent, Belgium; Universidad Autónoma ̌ de Chiriquí, David, Panama; and University of South Bohemia, Ceské Budejovice,̌ Czech Republic r 2021 Elsevier Inc. All rights reserved. Introduction The class Leotiomycetes represents a large, diverse group of Pezizomycotina, Ascomycota (LoBuglio and Pfister, 2010; Johnston et al., 2019) encompassing 6440 described species across 53 families and 630 genera (Table 1).