Dithiothreitol, a New Protective Reagent for SH Groups* W
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Experiment 4
Experiment Limiting Reactant 5 A limiting reactant is the reagent that is completely consumed during a chemical reaction. Once this reagent is consumed the reaction stops. An excess reagent is the reactant that is left over once the limiting reagent is consumed. The maximum theoretical yield of a chemical reaction is dependent upon the limiting reagent thus the one that produces the least amount of product is the limiting reagent. For example, if a 2.00 g sample of ammonia is mixed with 4.00 g of oxygen in the following reaction, use stoichiometry to determine the limiting reagent. 4NH3 + 5O2 4NO + 6H2O Since the 4.00 g of O2 produced the least amount of product, O2 is the limiting reagent. In this experiment you will be given a mixture of two ionic solids, AgNO3 and K2CrO4, that are both soluble in water. When the mixture is dissolved into water they will react to form an insoluble compound, Ag2CrO4, which can be collected and weighed. The reaction is the following: 2 AgNO3(aq) + K2CrO4(aq) Ag2CrO4(s) + 2 KNO3(aq) Colorless Yellow Red colorless Precipitate Precipitate is the term used for an insoluble solid which is produced by mixing two solutions. Often the solid particles are so fine that they will pass right through the pores of a filter. Heating the solution for a while causes the particles to clump together, a process called digesting. The precipitate coagulates upon cooling and eventually settles to the bottom of a solution container. The clear liquid above the precipitate is called the supernatant. -
Review of Calculations for Organic Reactions (Assignment #1B)
Review of Calculations for Organic Reactions (Assignment #1b) In your experiments the quantities of many reactants are given in mass or volume, though chemicals react in mole ratios, because it is not possible to measure a quantity in moles easily. You will have to convert mass or volume (mass = volume x density) to moles before beginning an experiment. You will also have to recognize stoichiometric relationships between reactants and products, which is based on mole ratio, in order to be able to calculate the theoretical yield of product you expect to isolate. You will apply the knowledge from this session to complete the theoretical yield calculation in your prelab reports and postlab reports. In this lab you are expected to be able to differentiate between a limiting reagent and excess reagents, solvents and catalysts which are crucial for the reaction to occur and go to completion. A limiting reagent is a reactant that has the lowest number of moles of all reactants in the chemical reaction and once it is completely consumed the reaction terminates. An excess reagent is a reactant that has a higher number of moles and therefore is not used up when a reaction goes to completion. Solvents and catalysts are not involved in the determination of limiting reagent. An example of calculations that you will be expected to perform is shown using the reaction of phenol with nitric acid. Preparation of picric acid requires the nitration of phenol. Given 5.00 grams of phenol and 15.0 mL concentrated nitric acid (15.9 M), one can determine the MAXIMUM theoretical amount of picric acid formed. -
Optical Properties and Denaturation by Guanidinium Chloride and Urea
Biochem. J. (1977) 161, 321-331 321 Printed in Great Britain Optical Properties and Denaturation by Guanidinium Chloride and Urea of the Adenosine Triphosphatase of Micrococcus lysodeikticus A COMPARISON OF FOUR MOLECULAR FORMS OF THE ENZYME By MANUEL NIETO and JUAN A. AYALA Seccion de Bioquimica de Membranas, Centro de Investigaciones Biol6gicas, Veldzquez 144, Madrid-6, Spain (Received 7 July 1976) 1. The fluorescence and circular dichroism offour homogeneous preparations of ATPase (adenosine triphosphatase) fromMicrococcus lysodeikticus differing in molecular structure and enzymic properties were examined at pH 7.5 and 25°C. Emission was maximum at 325 and 335nm and the relative intensities at these wavelengths may be used to characterize the different ATPase preparations. The circular-dichroism spectra exhibited negative extrema at 208 and 220nm, and the relative value of the molar ellipticity at these wave- lengths was also different for each molecular form ofthe enzyme. 2. The four preparations undergo two consecutive major unfolding transitions in guanidinium chloride (midpoints at 0.94 and 1.5 M denaturant), with concomitant destruction ofthe quaternary structure of the protein. A comparatively minor alteration in the ATPase structure also occurred in 0.05-0.2M-guanidine and led to complete inactivation ofthe enzyme. The inactivation and the first unfolding transition were reversible by dilution of the denaturant; the transition with midpoint at 1.5M-guanidine was irreversible. 3. Similar results were obtained in urea, except that the successive transitions had midpoints at concentrations of denaturant of 0.4, 2.0 and 4.5M. Low concentrations of urea caused a noticeable activation of the enzyme activity and alterations of the electrophoretic mobility of the ATPase. -
DTT (Dithiothreitol)
FT-054721(284251) DTT (DithioThreitol) Product Information Catalog #: 054721, 5g 054722, 25g Name: DTT (DithioThreitol), Biotech grade CAS: 3483-12-3 Molecular Weight : MW: 154.25 Typical values: Purity: >99.4% Abs@283nm (0.1M, water):<0.05 Loss on drying: <0.5% other names: mp: 39-43°C (2S,3S)-1,4-Bis-sulfanylbutane-2,3-diol Oxidized DTT: <0.5% Threo-1,4-dimercaptobutane-2,3-diol Protease: none DL-Threo-1,4-dimercapto-2,3-butanediol DNase: none 1,4-Dithio-DL-threitol, ±-Threo-1,4-dimercapto- RNase: none 2,3-butanediol Storage: -20°C (or 4°C short term). (M) Cleland's reagent, Reductacryl Protect from moisture. Keep dry Harmful / Irritant; R: 36/37/38; S: 26-36 Cleland’s Reagent, or Dithiothreitol (DTT), is a water-soluble reducing reagent used for various applications in biotechnology, biology and biochemistry : - reduces quantitatively disulfides, generating sulfhydryls (used typically at 1-10mM for protein SS reduction) - reduction of proteins before SDS-PAGE analysis, studies of protein structure and function (Kaji 1993) - keep sulfhydryl groups of biomolecules in the reduced state - protects biomolecules in various applications (enzymes or receptors, living cells under ionizing radiations) - prevents the fading of fluorescence such as FITC labeled conjugates (Picciolo 1984) Technical and Scientific Information Dithiothreitol (DTT), also known as Cleland's reagent, is a small-molecule redox reagent . Its oxidized form is a disulfide-bonded 6-membered ring. DTT has an epimeric ('sister') compound, dithioerythritol (DTE, #123378). DTT is highly soluble in water (clear solution, OD<0.05 at 0.02M), but also in ethanol, chloroform, ether and ethyl acetate. -
Irect Measurement of the Equilibrium Between Glutathione and Dithiothreitol by High Performant;E Liquid Chromatography
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Elsevier - Publisher Connector Volume 291. number 2. 296-298 FEES 10260 October 199 I 0 1991 Federation of European Biochemical Societies 00145793/911$3 50 ADONIS 0014579391009708 irect measurement of the equilibrium between glutathione and dithiothreitol by high performant;e liquid chromatography Mei-Hmg Chau and Jeffrey W. Nelson Deprtnlent of Btochemrsrry, Loutsrana Stare Unwersr~y, &ton. Rouge, LA 90803-1806, USA Received 17 Yuly 1991 The equthbrmm constant between reduced glutathlone (GSH), oxldlzed glutathlone (GSSG), reduced chthlothreltol (DTT:!), and oxidized dlthrothreltol (DTT~) has been directly measured by Hugh performance hqutd chromatography analysis of cqulhbrmm mixtures The equihbnum constdnt at 2YC for the reactlon GSSG + DTT:! + 2GSH -t De vanes from approximately 200 M, below pH 8, to approxnnately 2800 M. above pH 11 The observed pH dependence IS generally consistent with pubhshed values of acid dlssoclatIon constants of these thlols Glutathlonc. Dlthlothrenol, Thiol reagent, Dlsulfide exchange 1. INTRODUCTION We are currently carrymg out equihbnum studies of dlsulfide exchange of a protem usmg both dlthiothreitol Dlthiothreltol and glutathione are common reagents and glutathlone Surprismgly, the equihbrmm constant for ths study of disulfide exchange reactions of protein between dlthlothreltol and glutathlone obtamed mdl- &sulfides [l-9] The stabtlity of a dlsulfide bond m a rectly m our studies, approximately 120 M at pH 7 0 protein can be represented by the equihbrium constant (unpubhshed data), was found to be different from pre- of the thlol-dlsulfide exchange between that protem dl- vlously reported values. -
Essential Role of Coenzyme a in Pyruvate Dehydrogenase Kinase Activity
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Elsevier - Publisher Connector Volume 148, number 2 FEBSLETTERS November1982 Essential role of coenzyme A in pyruvate dehydrogenase kinase activity E.A. Siess and O.H. Wieland Forschergruppe Diabetes and Institut fiir Klinische Chemie, Sttidtisches Krankenhaus Miinchen-Schwabing, Kd;lner Platz 1, D-8000 Miinchen 40, FRG Received 16 September 1982 The rate of phosphorylation and concomitant inactivation of purified pig heart muscle pyruvate de- hydrogenase complex by intrinsic kinase (EC 2.7.1.99) is markedly accelerated by the addition of co- enzyme A to the incubation medium, showing a half-maximum effect at 1.8 PM. The pantetheine moiety is the effective part of the coenzyme A molecule. The free thiol group is prerequisite for the stimulatory action, acetyl-CoA, benzoyl-CoA or CoAS-SCoA being ineffectual. The thiol’s specificity is evidenced by showing that dithiothreitol, 2-mercaptoethanol or glutathione up to 5 mM failed to replace coenzyme A. The possibility is considered that coenzyme A might act as a physiological modifier of pyruvate dehydrogenase kinase activity. Pyruvate dehydrogenase kinase Phosphorylation Coenzyme A Heart muscle 1. INTRODUCTION together with 50 ~1 0.1 M Na2CO3, 200 ~1 30 mM Tris-HCl buffer (pH 8.6) and 20 ~132 PM CuSO4 Recent work on highly purified pyruvate de- at 25°C. After 2 h, >90% of the initially titratable hydrogenase complex (PDH) from bovine kidney thiol content [4] had disappeared. [Y-~~P]ATP was suggests that protein thiol-disulfide exchange purchased from the Radiochemical Centre is involved in the regulation of PDH kinase (Amersham). -
DL-Dithiothreitol Solution (646563)
DL-Dithiothreitol Solution 1 M in H2O Catalog Number 646563 Store at Room Temperature CAS RN 3483-12-3 Precautions and Disclaimer Synonyms: Cleland's Reagent, DTT For R&D use only. Not for drug, household, or other Molecular Formula: C4H10O2S2 uses. Please consult the Safety Data Sheet for Molecular Weight: 154.3 information regarding hazards and safe handling practices. Product Description Dithiothreitol (DTT) is used in proteomics applications Preparation Instructions to maintain sulfhydryl (–SH) groups in the reduced state This product is supplied as a ready-to-use 1 M solution. and for quantitative reduction of disulfide (–S–S–) groups, as described by Cleland in his pioneering work Storage/Stability in the 1960's.1 By reducing the disulfide bonds in a The unopened product is stable for at least two years at protein sample, the protein can be more effectively room temperature. fragmented and analyzed. Procedure DTT is a commonly used reagent in buffers because of SDS-PAGE sample preparation with DTT its ability to reduce the oxidation state of a protein 1. Dilute the 1 M DTT Solution to 50 mM by adding sample, and thereby, preserve enzymatic activity.2 50 L of the 1 M DTT Solution to 950 L of DTT is oxidized to the cyclic disulfide during the ultrapure water. reduction of other disulfides in solution. Disulfide 2. Aliquots of the 50 mM can be added to the samples reduction is typically complete in minutes at pH 8. Its to a final concentration of 5 mM. usefulness stems from its water solubility, reduced 3. -
Electrophoretic Resolution of Three Major Insulin Receptor Structures
Proc. Natl. Acad. Sci. USA Vol. 77, No. 12, pp. 7137-7141, December 1980 Biochemistry Electrophoretic resolution of three major insulin receptor structures with unique subunit stoichiometries (crosslinking/plasma membranes/receptor heterogeneity/disulfide-linked subunits/insulin action) JOAN MASSAGUE, PAUL F. PILCH, AND MICHAEL P. CZECH Section of Physiological Chemistry, Division of Biology and Medicine, Brown University, Providence, Rhode Island 02912 Communicated by Herman M. Kalckar, August 29, 1980 ABSTRACT Plasma membrane insulin receptors, affinity erogeneous population of three major insulin receptor structures labeled by covalent crosslinking to receptor-bound "25I-labeled in membranes from all rat and human tissues studied. The insulin, are shown to appear as a heterogeneous population of resolution of these heterogeneous insulin receptor structures three major disulfide-Iinked complexes (Mr 350,000, 320,000, and 290,000) upon electrophoresis in highly porous dodecyl clarifies the apparent diversity of results obtained in different sulfate/polyacrylamide gels in the absence of reductant. This laboratories concerning subunit components of the receptor. pattern is consistent in all rat and human tissues that were an- Our results reveal that the three receptor structures resolved alyzed. Upon reduction of disulfide bonds, each of these re- consist of the Mr 125,000-135,000, Mr 90,000, and Mr ceptor structures is dissociated in two successive steps. Low 45,000-49,000 subunits, identified in various laboratories (1-9), concentrations of dithiothreitol promote a first step of disulfide in unique stoichiometries. bond reduction in which the Mr 350,000 species splits into a Mr 210,000 form and the Mr 290,000 species splits into a Mr 160,000 form. -
Photoremovable Protecting Groups Used for the Caging of Biomolecules
1 1 Photoremovable Protecting Groups Used for the Caging of Biomolecules 1.1 2-Nitrobenzyl and 7-Nitroindoline Derivatives John E.T. Corrie 1.1.1 Introduction 1.1.1.1 Preamble and Scope of the Review This chapter covers developments with 2-nitrobenzyl (and substituted variants) and 7-nitroindoline caging groups over the decade from 1993, when the author last reviewed the topic [1]. Other reviews covered parts of the field at a similar date [2, 3], and more recent coverage is also available [4–6]. This chapter is not an exhaustive review of every instance of the subject cages, and its principal focus is on the chemistry of synthesis and photocleavage. Applications of indi- vidual compounds are only briefly discussed, usually when needed to put the work into context. The balance between the two cage types is heavily slanted to- ward the 2-nitrobenzyls, since work with 7-nitroindoline cages dates essentially from 1999 (see Section 1.1.3.2), while the 2-nitrobenzyl type has been in use for 25 years, from the introduction of caged ATP 1 (Scheme 1.1.1) by Kaplan and co-workers [7] in 1978. Scheme 1.1.1 Overall photolysis reaction of NPE-caged ATP 1. Dynamic Studies in Biology. Edited by M. Goeldner, R. Givens Copyright © 2005 WILEY-VCH Verlag GmbH & Co. KGaA, Weinheim ISBN: 3-527-30783-4 2 1 Photoremovable Protecting Groups Used for the Caging of Biomolecules 1.1.1.2 Historical Perspective The pioneering work of Kaplan et al. [7], although preceded by other examples of 2-nitrobenzyl photolysis in synthetic organic chemistry, was the first to apply this to a biological problem, the erythrocytic Na:K ion pump. -
Protein Measurement with the Folin Phenol Reagent*
PROTEIN MEASUREMENT WITH THE FOLIN PHENOL REAGENT* BY OLIVER H. LOWRY, NIRA J. ROSEBROUGH, A. LEWIS FARR, AND ROSE J. RANDALL (From the Department of Pharmacology, Washington University School oj Medicine, St. Louis, Missouri) (Received for publication, May 28, 1951) Since 1922 when Wu proposed the use of the Folin phenol reagent for Downloaded from the measurement of proteins (l), a number of modified analytical pro- cedures ut.ilizing this reagent have been reported for the determination of proteins in serum (2-G), in antigen-antibody precipitates (7-9), and in insulin (10). Although the reagent would seem to be recommended by its great sen- sitivity and the simplicity of procedure possible with its use, it has not www.jbc.org found great favor for general biochemical purposes. In the belief that this reagent, nevertheless, has considerable merit for certain application, but that its peculiarities and limitations need to be at Washington University on June 25, 2009 understood for its fullest exploitation, it has been studied with regard t.o effects of variations in pH, time of reaction, and concentration of react- ants, permissible levels of reagents commonly used in handling proteins, and interfering subst.ances. Procedures are described for measuring pro- tein in solution or after precipitation wit,h acids or other agents, and for the determination of as little as 0.2 y of protein. Method Reagents-Reagent A, 2 per cent N&OX in 0.10 N NaOH. Reagent B, 0.5 per cent CuS04.5Hz0 in 1 per cent sodium or potassium tartrabe. Reagent C, alkaline copper solution. -
Biochemistry Panel Plus
Piccolo® BioChemistry Panel Plus For In Vitro Diagnostic Use and Professional Use Only Customer and Technical Service: 1-800-822-2947 Customers outside the US: +49 6155 780 210 Abaxis, Inc. ABAXIS Europe GmbH 3240 Whipple Rd. Bunsenstr. 9-11 Union City, CA 94587 64347 Griesheim USA Germany 1. Intended Use The Piccolo® BioChemistry Panel Plus, used with the Piccolo Xpress® chemistry analyzer, is intended to be used for the in vitro quantitative determination of alanine aminotransferase (ALT), albumin, alkaline phosphatase (ALP), amylase, aspartate aminotransferase (AST), c-reactive protein (CRP), calcium, creatinine, gamma glutamyltransferase (GGT), glucose, total protein, blood urea nitrogen (BUN), and uric acid in lithium heparinized whole blood, lithium heparinized plasma, or serum in a clinical laboratory setting or point-of-care location. The Abaxis CRP method is not intended for high sensitivity CRP measurement. 2. Summary and Explanation of Tests The Piccolo BioChemistry Panel Plus and the Piccolo Xpress chemistry analyzer comprise an in vitro diagnostic system that aids the physician in diagnosing the following disorders. Alanine aminotransferase (ALT): Liver diseases, including viral hepatitis and cirrhosis. Albumin: Liver and kidney diseases. Alkaline phosphatase (ALP): Liver, bone, parathyroid, and intestinal diseases. Amylase: Pancreatitis. Aspartate aminotransferase (AST): Liver disease including hepatitis and viral jaundice, shock. C-Reactive Protein (CRP): Infection, tissue injury, and inflammatory disorders. Calcium: Parathyroid, bone and chronic renal diseases; tetany. Creatinine: Renal disease and monitoring of renal dialysis. Gamma glutamyltransferase (GGT): Liver diseases, including alcoholic cirrhosis and primary and secondary liver tumors. Glucose: Carbohydrate metabolism disorders, including adult and juvenile diabetes mellitus and hypoglycemia. Total protein: Liver, kidney, bone marrow diseases; metabolic and nutritional disorders. -
2-Mercaptoethanol
2-Mercaptoethanol From Wikipedia, the free encyclopedia 2-Mercaptoethanol IUPAC name[hide] 2-Sulfanylethan-1-ol[citation needed] Other names[hide] 2-Hydroxy-1-ethanethiol[citation needed] β-Mercaptoethanol[citation needed] Thioglycol[citation needed] Identifiers CAS number 60-24-2 PubChem 1567 ChemSpider 1512 EC number 200-464-6 UN number 2966 DrugBank DB03345 KEGG C00928 MeSH Mercaptoethanol ChEBI CHEBI:41218 ChEMBL CHEMBL254951 RTECS number KL5600000 Beilstein Reference 773648 Gmelin Reference 1368 3DMet B00201 Jmol-3D images Image 1 SMILES [show] InChI [show] Properties Molecular formula C 2H 6SO −1 Molar mass 78.133 g mol −3 Density 1.114 g cm Melting point −100 °C, 173 K, -148 °F Boiling point 157 °C, 430 K, 314 °F log P -0.23 Vapor pressure 100 Pa (at 20 °C) Acidity (pKa) 9.643 Basicity (pKb) 4.354 Refractive index(nD) 1.4996 Hazards MSDS msds.chem.ox.ac.uk GHS pictograms GHS signal word DANGER GHS hazard statements H301, H310, H315, H317,H318, H330, H410 GHS precautionary P260, P273, P280, P284,P301+310, P302+350 statements EU classification T N R-phrases R20/22, R24, R34, R51/53 S-phrases S26, S36/37/39, S45, S61 Flash point 68 °C Explosive limits 18% Related compounds Related compounds Ethylene glycol 1,2-Ethanedithiol (verify) (what is: / ?) Except where noted otherwise, data are given for materials in their standard state (at 25 °C, 100 kPa) Infobox references 2-Mercaptoethanol (also β-mercaptoethanol, BME, 2BME, 2-ME or β-met) is the chemical compound with the formula HOCH2CH2SH. ME or βME, as it is commonly abbreviated, is used to reduce disulfide bonds and can act as a biological antioxidant by scavenging hydroxyl radicals (amongst others).