Biofilms in Beverage Industry
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Asaia Bogorensis Gen. Nov., Sp. Nov., an Unusual Acetic Acid Bacterium in the Α-Proteobacteria
International Journal of Systematic and Evolutionary Microbiology (2000) 50, 823–829 Printed in Great Britain Asaia bogorensis gen. nov., sp. nov., an unusual acetic acid bacterium in the α-Proteobacteria Yuzo Yamada,1 Kazushige Katsura,1 Hiroko Kawasaki,2 Yantyati Widyastuti,3 Susono Saono,3 Tatsuji Seki,2 Tai Uchimura1 and Kazuo Komagata1 Author for correspondence: Yuzo Yamada. Tel\Fax: j81 54 635 2316. 1 Laboratory of General and Eight Gram-negative, aerobic, rod-shaped and peritrichously flagellated strains Applied Microbiology, were isolated from flowers of the orchid tree (Bauhinia purpurea) and of Department of Applied Biology and Chemistry, plumbago (Plumbago auriculata), and from fermented glutinous rice, all Faculty of Applied collected in Indonesia. The enrichment culture approach for acetic acid bacteria Bioscience, Tokyo was employed, involving use of sorbitol medium at pH 35. All isolates grew University of Agriculture, Sakuragaoka 1-1-1, well at pH 30 and 30 SC. They did not oxidize ethanol to acetic acid except for Setagaya-ku, one strain that oxidized ethanol weakly, and 035% acetic acid inhibited their Tokoyo 156-8502, Japan growth completely. However, they oxidized acetate and lactate to carbon 2 The International Center dioxide and water. The isolates grew well on mannitol agar and on glutamate for Biotechnology, Osaka agar, and assimilated ammonium sulfate for growth on vitamin-free glucose University, Yamadaoka 2-1, Suita, Osaka 565-0871, medium. The isolates produced acid from D-glucose, D-fructose, L-sorbose, Japan dulcitol and glycerol. The quinone system was Q-10. DNA base composition 3 Research and ranged from 593to610 mol% GMC. -
The Tonb System in Aeromonas Hydrophila NJ-35 Is Essential for Maca2b2 Efflux Pump-Mediated Macrolide Resistance
Dong et al. Vet Res (2021) 52:63 https://doi.org/10.1186/s13567-021-00934-w RESEARCH ARTICLE Open Access The TonB system in Aeromonas hydrophila NJ-35 is essential for MacA2B2 efux pump-mediated macrolide resistance Yuhao Dong1, Qing Li2, Jinzhu Geng1, Qing Cao1, Dan Zhao1, Mingguo Jiang3, Shougang Li1, Chengping Lu1 and Yongjie Liu1* Abstract The TonB system is generally considered as an energy transporting device for the absorption of nutrients. Our recent study showed that deletion of this system caused a signifcantly increased sensitivity of Aeromonas hydrophila to the macrolides erythromycin and roxithromycin, but had no efect on other classes of antibiotics. In this study, we found the sensitivity of ΔtonB123 to all macrolides tested revealed a 8- to 16-fold increase compared with the wild-type (WT) strain, but this increase was not related with iron deprivation caused by tonB123 deletion. Further study demonstrated that the deletion of tonB123 did not damage the integrity of the bacterial membrane but did hinder the function of macrolide efux. Compared with the WT strain, deletion of macA2B2, one of two ATP-binding cassette (ABC) types of the macrolide efux pump, enhanced the sensitivity to the same levels as those of ΔtonB123. Interestingly, the dele- tion of macA2B2 in the ΔtonB123 mutant did not cause further increase in sensitivity to macrolide resistance, indicat- ing that the macrolide resistance aforded by the MacA2B2 pump was completely abrogated by tonB123 deletion. In addition, macA2B2 expression was not altered in the ΔtonB123 mutant, indicating that any infuence of TonB on MacA2B2-mediated macrolide resistance was at the pump activity level. -
Adhesion of <I>Asaia</I> <I>Bogorensis</I> To
1186 Journal of Food Protection, Vol. 78, No. 6, 2015, Pages 1186–1190 doi:10.4315/0362-028X.JFP-14-440 Copyright G, International Association for Food Protection Research Note Adhesion of Asaia bogorensis to Glass and Polystyrene in the Presence of Cranberry Juice HUBERT ANTOLAK,* DOROTA KREGIEL, AND AGATA CZYZOWSKA Institute of Fermentation Technology and Microbiology, Lodz University of Technology, Wolczanska 171/173, 90-924 Lodz, Poland MS 14-440: Received 10 September 2014/Accepted 29 January 2015 Downloaded from http://meridian.allenpress.com/jfp/article-pdf/78/6/1186/1686447/0362-028x_jfp-14-440.pdf by guest on 02 October 2021 ABSTRACT The aim of the study was to evaluate the adhesion abilities of the acetic acid bacterium Asaia bogorensis to glass and polystyrene in the presence of American cranberry (Vaccinium macrocarpon) juice. The strain of A. bogorensis used was isolated from spoiled commercial fruit-flavored drinking water. The cranberry juice was analyzed for polyphenols, organic acids, and carbohydrates using high-performance liquid chromatography and liquid chromatography–mass spectrometry techniques. The adhesive abilities of bacterial cells in culture medium supplemented with cranberry juice were determined using luminometry and microscopy. The viability of adhered and planktonic bacterial cells was determined by the plate count method, and the relative adhesion coefficient was calculated. This strain of A. bogorensis was characterized by strong adhesion properties that were dependent upon the type of surface. The highest level of cell adhesion was found on the polystyrene. However, in the presence of 10% cranberry juice, attachment of bacterial cells was three times lower. Chemical analysis of juice revealed the presence of sugars, organic acids, and anthocyanins, which were identified as galactosides, glucosides, and arabinosides of cyanidin and peonidin. -
Anti-Adhesion Activity of Mint (Mentha Piperita L.) Leaves Extract Against Beverage Spoilage Bacteria Asaia Spp
Biotechnology and Food Sciences Research article Anti-adhesion activity of mint (Mentha piperita L.) leaves extract against beverage spoilage bacteria Asaia spp. Hubert Antolak,* Agata Czyżowska, Dorota Kręgiel Institute of Fermentation Technology and Microbiology, Lodz University of Technology, Wolczanska 171/173, 90-924 Lodz, Poland *[email protected] Abstract: The production of a functional beverage, supplemented with fruit flavourings meets the problem of microbiological contamination. The most frequent source of such spoilage is the bacteria from the relatively newly discovered genus Asaia. It causes changes in organoleptic properties, creating turbidity, haziness and distinctive sour odour as well as biofilm on production lines which are responsible for secondary contamination of products. For this reason, new methods using natural preservatives are being developed to minimize this microbiological contamination. The application of some plant extracts as an additives in functional beverages production is presumed to have a beneficial effect on reducing adhesive abilities of the bacteria. The aim of this research was to investigate the effects of mint leaves extract on the Asaia lannensis and Asaia bogorensis adhesive abilities to polystyrene. The bacterial adhesion was analysed by means of plate count method and luminometric tests. Additionally, plant extract was subjected to high performance liquid chromatography (HPLC) analysis, in order to check polyphenols content. Results indicates that 10% (v/v) addition of mint extract significantly reduced Asaia spp. adhesion to polystyrene. Due to the presence of bioactive compounds in the used extract, it can be used as an additive to increase microbiological stability as well as health promoting values of beverages. Keywords: Asaia spp., mint extract, anti-adhesive properties, functional beverages. -
Polyamine Profiles of Some Members of the Alpha Subclass of the Class Proteobacteria: Polyamine Analysis of Twenty Recently Described Genera
Microbiol. Cult. Coll. June 2003. p. 13 ─ 21 Vol. 19, No. 1 Polyamine Profiles of Some Members of the Alpha Subclass of the Class Proteobacteria: Polyamine Analysis of Twenty Recently Described Genera Koei Hamana1)*,Azusa Sakamoto1),Satomi Tachiyanagi1), Eri Terauchi1)and Mariko Takeuchi2) 1)Department of Laboratory Sciences, School of Health Sciences, Faculty of Medicine, Gunma University, 39 ─ 15 Showa-machi 3 ─ chome, Maebashi, Gunma 371 ─ 8514, Japan 2)Institute for Fermentation, Osaka, 17 ─ 85, Juso-honmachi 2 ─ chome, Yodogawa-ku, Osaka, 532 ─ 8686, Japan Cellular polyamines of 41 newly validated or reclassified alpha proteobacteria belonging to 20 genera were analyzed by HPLC. Acetic acid bacteria belonging to the new genus Asaia and the genera Gluconobacter, Gluconacetobacter, Acetobacter and Acidomonas of the alpha ─ 1 sub- group ubiquitously contained spermidine as the major polyamine. Aerobic bacteriochlorophyll a ─ containing Acidisphaera, Craurococcus and Paracraurococcus(alpha ─ 1)and Roseibium (alpha-2)contained spermidine and lacked homospermidine. New Rhizobium species, including some species transferred from the genera Agrobacterium and Allorhizobium, and new Sinorhizobium and Mesorhizobium species of the alpha ─ 2 subgroup contained homospermidine as a major polyamine. Homospermidine was the major polyamine in the genera Oligotropha, Carbophilus, Zavarzinia, Blastobacter, Starkeya and Rhodoblastus of the alpha ─ 2 subgroup. Rhodobaca bogoriensis of the alpha ─ 3 subgroup contained spermidine. Within the alpha ─ 4 sub- group, the genus Sphingomonas has been divided into four clusters, and species of the emended Sphingomonas(cluster I)contained homospermidine whereas those of the three newly described genera Sphingobium, Novosphingobium and Sphingopyxis(corresponding to clusters II, III and IV of the former Sphingomonas)ubiquitously contained spermidine. -
Delineation of Aeromonas Hydrophila Pathotypes by Dectection of Putative Virulence Factors Using Polymerase Chain Reaction and N
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by DigitalCommons@Kennesaw State University Kennesaw State University DigitalCommons@Kennesaw State University Master of Science in Integrative Biology Theses Biology & Physics Summer 7-20-2015 Delineation of Aeromonas hydrophila Pathotypes by Dectection of Putative Virulence Factors using Polymerase Chain Reaction and Nematode Challenge Assay John Metz Kennesaw State University, [email protected] Follow this and additional works at: http://digitalcommons.kennesaw.edu/integrbiol_etd Part of the Integrative Biology Commons Recommended Citation Metz, John, "Delineation of Aeromonas hydrophila Pathotypes by Dectection of Putative Virulence Factors using Polymerase Chain Reaction and Nematode Challenge Assay" (2015). Master of Science in Integrative Biology Theses. Paper 7. This Thesis is brought to you for free and open access by the Biology & Physics at DigitalCommons@Kennesaw State University. It has been accepted for inclusion in Master of Science in Integrative Biology Theses by an authorized administrator of DigitalCommons@Kennesaw State University. For more information, please contact [email protected]. Delineation of Aeromonas hydrophila Pathotypes by Detection of Putative Virulence Factors using Polymerase Chain Reaction and Nematode Challenge Assay John Michael Metz Submitted in partial fulfillment of the requirements for the Master of Science Degree in Integrative Biology Thesis Advisor: Donald J. McGarey, Ph.D Department of Molecular and Cellular Biology Kennesaw State University ABSTRACT Aeromonas hydrophila is a Gram-negative, bacterial pathogen of humans and other vertebrates. Human diseases caused by A. hydrophila range from mild gastroenteritis to soft tissue infections including cellulitis and acute necrotizing fasciitis. When seen in fish it causes dermal ulcers and fatal septicemia, which are detrimental to aquaculture stocks and has major economic impact to the industry. -
Genome Features of Asaia Sp. W12 Isolated from the Mosquito Anopheles Stephensi Reveal Symbiotic Traits
G C A T T A C G G C A T genes Article Genome Features of Asaia sp. W12 Isolated from the Mosquito Anopheles stephensi Reveal Symbiotic Traits Shicheng Chen 1,* , Ting Yu 2, Nicolas Terrapon 3,4 , Bernard Henrissat 3,4,5 and Edward D. Walker 6 1 Department of Clinical and Diagnostic Sciences, School of Health Sciences, Oakland University, 433 Meadowbrook Road, Rochester, MI 48309, USA 2 Agro-Biological Gene Research Center, Guangdong Academy of Agricultural Sciences, Guangzhou 510640, China; [email protected] 3 Architecture et Fonction des Macromolécules Biologiques, Centre National de la Recherche Scientifique (CNRS), Aix-Marseille Université (AMU), UMR 7257, 13288 Marseille, France; [email protected] (N.T.); [email protected] (B.H.) 4 Institut National de la Recherche Agronomique (INRA), USC AFMB, 1408 Marseille, France 5 Department of Biological Sciences, King Abdulaziz University, Jeddah 21412, Saudi Arabia 6 Department of Microbiology and Molecular Genetics, Michigan State University, East Lansing, MI 48824, USA; [email protected] * Correspondence: [email protected]; Tel.: +1-248-364-8662 Abstract: Asaia bacteria commonly comprise part of the microbiome of many mosquito species in the genera Anopheles and Aedes, including important vectors of infectious agents. Their close association with multiple organs and tissues of their mosquito hosts enhances the potential for paratransgenesis for the delivery of antimalaria or antivirus effectors. The molecular mechanisms involved in the interactions between Asaia and mosquito hosts, as well as Asaia and other bacterial members of the mosquito microbiome, remain underexplored. Here, we determined the genome sequence of Asaia strain W12 isolated from Anopheles stephensi mosquitoes, compared it to other Asaia species associated Citation: Chen, S.; Yu, T.; Terrapon, with plants or insects, and investigated the properties of the bacteria relevant to their symbiosis N.; Henrissat, B.; Walker, E.D. -
Table S5. the Information of the Bacteria Annotated in the Soil Community at Species Level
Table S5. The information of the bacteria annotated in the soil community at species level No. Phylum Class Order Family Genus Species The number of contigs Abundance(%) 1 Firmicutes Bacilli Bacillales Bacillaceae Bacillus Bacillus cereus 1749 5.145782459 2 Bacteroidetes Cytophagia Cytophagales Hymenobacteraceae Hymenobacter Hymenobacter sedentarius 1538 4.52499338 3 Gemmatimonadetes Gemmatimonadetes Gemmatimonadales Gemmatimonadaceae Gemmatirosa Gemmatirosa kalamazoonesis 1020 3.000970902 4 Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas indica 797 2.344876284 5 Firmicutes Bacilli Lactobacillales Streptococcaceae Lactococcus Lactococcus piscium 542 1.594633558 6 Actinobacteria Thermoleophilia Solirubrobacterales Conexibacteraceae Conexibacter Conexibacter woesei 471 1.385742446 7 Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas taxi 430 1.265115184 8 Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas wittichii 388 1.141545794 9 Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas sp. FARSPH 298 0.876754244 10 Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sorangium cellulosum 260 0.764953367 11 Proteobacteria Deltaproteobacteria Myxococcales Polyangiaceae Sorangium Sphingomonas sp. Cra20 260 0.764953367 12 Proteobacteria Alphaproteobacteria Sphingomonadales Sphingomonadaceae Sphingomonas Sphingomonas panacis 252 0.741416341 -
Original Article COMPARISON of MAST BURKHOLDERIA CEPACIA, ASHDOWN + GENTAMICIN, and BURKHOLDERIA PSEUDOMALLEI SELECTIVE AGAR
European Journal of Microbiology and Immunology 7 (2017) 1, pp. 15–36 Original article DOI: 10.1556/1886.2016.00037 COMPARISON OF MAST BURKHOLDERIA CEPACIA, ASHDOWN + GENTAMICIN, AND BURKHOLDERIA PSEUDOMALLEI SELECTIVE AGAR FOR THE SELECTIVE GROWTH OF BURKHOLDERIA SPP. Carola Edler1, Henri Derschum2, Mirko Köhler3, Heinrich Neubauer4, Hagen Frickmann5,6,*, Ralf Matthias Hagen7 1 Department of Dermatology, German Armed Forces Hospital of Hamburg, Hamburg, Germany 2 CBRN Defence, Safety and Environmental Protection School, Science Division 3 Bundeswehr Medical Academy, Munich, Germany 4 Friedrich Loeffler Institute, Federal Research Institute for Animal Health, Jena, Germany 5 Department of Tropical Medicine at the Bernhard Nocht Institute, German Armed Forces Hospital of Hamburg, Hamburg, Germany 6 Institute for Medical Microbiology, Virology and Hygiene, University Medicine Rostock, Rostock, Germany 7 Department of Preventive Medicine, Bundeswehr Medical Academy, Munich, Germany Received: November 18, 2016; Accepted: December 5, 2016 Reliable identification of pathogenic Burkholderia spp. like Burkholderia mallei and Burkholderia pseudomallei in clinical samples is desirable. Three different selective media were assessed for reliability and selectivity with various Burkholderia spp. and non- target organisms. Mast Burkholderia cepacia agar, Ashdown + gentamicin agar, and B. pseudomallei selective agar were compared. A panel of 116 reference strains and well-characterized clinical isolates, comprising 30 B. pseudomallei, 20 B. mallei, 18 other Burkholderia spp., and 48 nontarget organisms, was used for this assessment. While all B. pseudomallei strains grew on all three tested selective agars, the other Burkholderia spp. showed a diverse growth pattern. Nontarget organisms, i.e., nonfermentative rod-shaped bacteria, other species, and yeasts, grew on all selective agars. -
Research Article Rodents As Hosts of Pathogens and Related Zoonotic Disease Risk Handi DAHMANA1, 2, Laurent GRANJON3, Christop
Preprints (www.preprints.org) | NOT PEER-REVIEWED | Posted: 11 February 2020 doi:10.20944/preprints202002.0153.v1 Peer-reviewed version available at Pathogens 2020, 9, 202; doi:10.3390/pathogens9030202 1 Research article 2 Rodents as hosts of pathogens and related zoonotic disease risk 3 4 Handi DAHMANA1, 2, Laurent GRANJON3, Christophe DIAGNE3, Bernard DAVOUST1, 2, 5 Florence FENOLLAR2,4, Oleg MEDIANNIKOV1, 2* 6 1 Aix Marseille Univ, IRD, AP-HM, MEPHI, Marseille, France 7 2 IHU-Méditerranée Infection, Marseille, France 8 3 CBGP, IRD, CIRAD, INRA, Montpellier SupAgro, Univ Montpellier, Montpellier, France 9 4 Aix Marseille Univ, IRD, AP-HM, SSA, VITROME, Marseille, France 10 11 Corresponding author: Oleg MEDIANNIKOV 12 Address: MEPHI, IRD, APHM, IHU-Méditerranée Infection, 19-21 Boulevard Jean Moulin, 13 13385 Marseille Cedex 05 14 Tel : +33 (0)4 13 73 24 01, Fax: +33 (0)4 13 73 24 02, E-mail: [email protected]. Code de champ modifié 15 16 17 Word abstract count : 230 18 Word text count: 5,720 19 1 © 2020 by the author(s). Distributed under a Creative Commons CC BY license. Preprints (www.preprints.org) | NOT PEER-REVIEWED | Posted: 11 February 2020 doi:10.20944/preprints202002.0153.v1 Peer-reviewed version available at Pathogens 2020, 9, 202; doi:10.3390/pathogens9030202 20 Abstract 21 Rodents are known to be reservoir hosts for at least 60 zoonotic diseases and are 22 known to play an important role in their transmission and spreading in different ways. We 23 sampled different rodent communities within and around human settlements in Northern 24 Senegal, an area subjected to major environmental transformations associated with global 25 changes. -
An Update on the Genus Aeromonas: Taxonomy, Epidemiology, and Pathogenicity
microorganisms Review An Update on the Genus Aeromonas: Taxonomy, Epidemiology, and Pathogenicity Ana Fernández-Bravo and Maria José Figueras * Unit of Microbiology, Department of Basic Health Sciences, Faculty of Medicine and Health Sciences, IISPV, University Rovira i Virgili, 43201 Reus, Spain; [email protected] * Correspondence: mariajose.fi[email protected]; Tel.: +34-97-775-9321; Fax: +34-97-775-9322 Received: 31 October 2019; Accepted: 14 January 2020; Published: 17 January 2020 Abstract: The genus Aeromonas belongs to the Aeromonadaceae family and comprises a group of Gram-negative bacteria widely distributed in aquatic environments, with some species able to cause disease in humans, fish, and other aquatic animals. However, bacteria of this genus are isolated from many other habitats, environments, and food products. The taxonomy of this genus is complex when phenotypic identification methods are used because such methods might not correctly identify all the species. On the other hand, molecular methods have proven very reliable, such as using the sequences of concatenated housekeeping genes like gyrB and rpoD or comparing the genomes with the type strains using a genomic index, such as the average nucleotide identity (ANI) or in silico DNA–DNA hybridization (isDDH). So far, 36 species have been described in the genus Aeromonas of which at least 19 are considered emerging pathogens to humans, causing a broad spectrum of infections. Having said that, when classifying 1852 strains that have been reported in various recent clinical cases, 95.4% were identified as only four species: Aeromonas caviae (37.26%), Aeromonas dhakensis (23.49%), Aeromonas veronii (21.54%), and Aeromonas hydrophila (13.07%). -
Aeromonas Hydrophila
P.O. Box 131375, Bryanston, 2074 Ground Floor, Block 5 Bryanston Gate, Main Road Bryanston, Johannesburg, South Africa www.thistle.co.za Tel: +27 (011) 463-3260 Fax: +27 (011) 463-3036 OR + 27 (0) 86-538-4484 e-mail : [email protected] Please read this section first The HPCSA and the Med Tech Society have confirmed that this clinical case study, plus your routine review of your EQA reports from Thistle QA, should be documented as a “Journal Club” activity. This means that you must record those attending for CEU purposes. Thistle will not issue a certificate to cover these activities, nor send out “correct” answers to the CEU questions at the end of this case study. The Thistle QA CEU No is: MT00025. Each attendee should claim THREE CEU points for completing this Quality Control Journal Club exercise, and retain a copy of the relevant Thistle QA Participation Certificate as proof of registration on a Thistle QA EQA. MICROBIOLOGY LEGEND CYCLE 28 – ORGANISM 3 Aeromonas hydrophila Aeromonas hydrophila is a heterotrophic, gram-negative, rod shaped bacterium, mainly found in areas with a warm climate. This bacterium can also be found in fresh, salt, marine, estuarine, chlorinated, and un-chlorinated water. Aeromonas hydrophila can survive in aerobic and anaerobic environments. This bacterium can digest materials such as gelatin, and hemoglobin. This bacterium is the most well known of the six species of Aeromonas. It is also highly resistant to multiple medications. Aeromonas hydrophila is resistant to chlorine, refrigeration and cold temperatures. Structure Aeromonas hydrophila are Gram-negative straight rods with rounded ends (bacilli to coccibacilli shape) usually from 0.3 to 1 µm in width, and 1 to 3 µm in length.