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6. Molecular Studies and Phylogeny
MOLECULAR STUDIES AND PHYLOGENY 14 6. Molecular studies and phylogeny Previous molecular studies employing rDNA ITS sequence data (CROUS et al. 2001) have shown cladosporium-like taxa to cluster adjacent to the main monophyletic Myco- sphaerella clade, suggesting a position apart of the latter genus. Comprehensive ITS (ITS- 1, 5.8S, ITS-2) and 18S rRNA sequence analyses carried out by BRAUN et al. (2003) provided further evidence for the separation of Cladosporium s. str. In the latter paper, results of molecular examinations published by other authors were summarised and phylograms of cladosporium-like fungi were discussed in detail. Human-pathogenic cladophialophora-like hyphomycetes (Herpotrichiellaceae), Sorocybe resinae (Fr.) Fr. (Amorphotheca resinae Parbery) (Amorphothecaceae), Alternaria malorum (Rühle) U. Braun, Crous & Dugan (Cladosporium malorum Rühle) (Pleosporaceae) and cladosporioid Venturia anamorphs (Fusicladium) (Venturiaceae) formed separate monophyletic clades and could be excluded from Cladosporium s. str. Within a big clade formed by members of the Mycosphaerellaceae, true Cladosporium species were shown to represent a sister clade to Mycosphaerella with cercosporoid anamorphs. The new teleomorph genus Davidiella was proposed to accommodate the teleomorphs of Cladosporium formerly placed in Mycosphaerella s. lat. It could be demonstrated that relatively minor differences in the conidiogenous loci and conidial hila support the different phylogenetic affinities. SEIFERT et al. (2004) used morphological characters, ecological features and DNA sequence data to characterise Cladosporium staurophorum taxonomically and phylogene- tically and assigned it to the new genus Devriesia. Together with three additional heat- resistant species, C. staurophorum formed a monophyletic group, with marginal position in the Mycosphaerellaceae, but clearly distinct from Cladosporium s. -
Universidad Nacional De La Plata Facultad De Ciencias Exactas Departamento Biología
UNIVERSIDAD NACIONAL DE LA PLATA FACULTAD DE CIENCIAS EXACTAS DEPARTAMENTO BIOLOGÍA Trabajo de Tesis Doctoral Estudio de las melaninas de Pseudocercospora griseola, agente causante de la mancha angular del poroto y rol biológico. Tesista Lic. Alejandra Bárcena Director Dr. Mario, Carlos Nazareno Saparrat, Codirector Dr. Pedro Alberto Balatti Asesora académica Dra. Mariela, Bruno Año 2016 AGRADECIMIENTOS A la Comisión de Investigaciones Científicas de la Provincia de Buenos Aires (CICBA) y a la Comisión Nacional de Investigaciones Científicas y Tecnológicas (CONICET) por las becas otorgadas. A la Universidad Nacional de La Plata, Facultad de Ciencias Exactas por permitirme realizar esta investigación. Al Dr. Mario Saparrat y el Dr. Pedro Balatti, por guiarme, enseñarme, entusiasmarme cuando los resultados eran como esperábamos, y por estimularme cuando así no era. Por cada una de nuestras discusiones para enriquecer el trabajo. Por enseñarme que la paciencia es la madre de la ciencia y el esfuerzo su padre. A la Dra. Mariela Bruno, por ser mi Asesora Académica, por escucharme, por sus palabras de aliento en los momentos más difíciles con esa ternura que la caracteriza. A la Dra. Laura López por asesorarme cuando comencé la tesis. A la Dra. Fernanda Rosas, Dra. María Mirifico, Dra Gabriela Petroselli, Dra Rosa Erra- Balsells, Dra. Ana Gennaro, Dr. José Estévez, por su colaboración con los espectros FTIR, UV MALDI-TOF, EPR, microscopía confocal, y sobre todo por la buena predisposición que siempre demostraron. A los chicos del laboratorio Carla, Darío, Ernest, Grace, Inés, Pepe, Silvina, Rocío, por estar siempre dispuestos a dar una mano en cuestiones de estadística, biología molecular, y también por los lindos momentos extra laborales. -
Based on a Newly-Discovered Species
A peer-reviewed open-access journal MycoKeys 76: 1–16 (2020) doi: 10.3897/mycokeys.76.58628 RESEARCH ARTICLE https://mycokeys.pensoft.net Launched to accelerate biodiversity research The insights into the evolutionary history of Translucidithyrium: based on a newly-discovered species Xinhao Li1, Hai-Xia Wu1, Jinchen Li1, Hang Chen1, Wei Wang1 1 International Fungal Research and Development Centre, The Research Institute of Resource Insects, Chinese Academy of Forestry, Kunming 650224, China Corresponding author: Hai-Xia Wu ([email protected], [email protected]) Academic editor: N. Wijayawardene | Received 15 September 2020 | Accepted 25 November 2020 | Published 17 December 2020 Citation: Li X, Wu H-X, Li J, Chen H, Wang W (2020) The insights into the evolutionary history of Translucidithyrium: based on a newly-discovered species. MycoKeys 76: 1–16. https://doi.org/10.3897/mycokeys.76.58628 Abstract During the field studies, aTranslucidithyrium -like taxon was collected in Xishuangbanna of Yunnan Province, during an investigation into the diversity of microfungi in the southwest of China. Morpho- logical observations and phylogenetic analysis of combined LSU and ITS sequences revealed that the new taxon is a member of the genus Translucidithyrium and it is distinct from other species. Therefore, Translucidithyrium chinense sp. nov. is introduced here. The Maximum Clade Credibility (MCC) tree from LSU rDNA of Translucidithyrium and related species indicated the divergence time of existing and new species of Translucidithyrium was crown age at 16 (4–33) Mya. Combining the estimated diver- gence time, paleoecology and plate tectonic movements with the corresponding geological time scale, we proposed a hypothesis that the speciation (estimated divergence time) of T. -
1. Padil Species Factsheet Scientific Name: Common Name Image
1. PaDIL Species Factsheet Scientific Name: Meliola mangiferae Earle (Ascomycota: Sordariomycetes: Meliolales: Meliolaceae) Common Name Meliola mangiferae Live link: http://www.padil.gov.au/maf-border/Pest/Main/143039 Image Library New Zealand Biosecurity Live link: http://www.padil.gov.au/maf-border/ Partners for New Zealand Biosecurity image library Landcare Research — Manaaki Whenua http://www.landcareresearch.co.nz/ MPI (Ministry for Primary Industries) http://www.biosecurity.govt.nz/ 2. Species Information 2.1. Details Specimen Contact: Eric McKenzie - [email protected] Author: McKenzie, E. Citation: McKenzie, E. (2013) Meliola mangiferae(Meliola mangiferae)Updated on 4/14/2014 Available online: PaDIL - http://www.padil.gov.au Image Use: Free for use under the Creative Commons Attribution-NonCommercial 4.0 International (CC BY- NC 4.0) 2.2. URL Live link: http://www.padil.gov.au/maf-border/Pest/Main/143039 2.3. Facets Commodity Overview: Field Crops and Pastures Commodity Type: Mango Distribution: Indo-Malaya, Nearctic, Neotropic, Oceania Groups: Fungi & Mushrooms Host Family: Anacardiaceae Pest Status: 2 NZ - Regulated pest Status: 0 NZ - Unknown 2.4. Diagnostic Notes **Disease** Black mildew, sooty blotch. **Morphology** _Colonies_ on both surfaces of living leaves, black, circular, usually 2–3 mm diam. _Hyphae_ dark brown, with small side branches (hyphopodia) some of which have a pore in the apex; hyphopodia alternate, 2-celled, 18–35 µm long. _Setae_ straight, dark brown, often with a forked apex, up to 900 µm long, 9–11 µm wide. _Ascomata_ black, globose. _Asci_ dissolve readily so not usually seen. _Ascospores_ 50–59 × 20–27.5 µm, dark brown, ellipsoid, thick-walled, smooth, straight, 4-septate, constricted at septa. -
Danilo Batista Pinho Biodiversidade De Fungos Da Família Meliolaceae De
DANILO BATISTA PINHO BIODIVERSIDADE DE FUNGOS DA FAMÍLIA MELIOLACEAE DE FRAGMENTOS DA MATA ATLÂNTICA DE MINAS GERAIS, BRASIL Dissertação apresentada à Universidade Federal de Viçosa, como parte das exigências do Programa de Pós- Graduação em Fitopatologia, para obtenção do título de Magister Scientiae. VIÇOSA MINAS GERAIS - BRASIL 2009 'A curiosidade é mais importante do que o conhecimento' (Albert Einstein) Dedico Aos meus pais Adão e Maria Eunice, e à minha filha Ingridy. ii AGRADECIMENTOS Agradeço a Deus pela proteção, sabedoria e por mais esta vitória; Aos meus pais Adão e Maria Eunice, e à minha filha Ingridy pelo incentivo, carinho e pela compreensão; À Universidade Federal de Viçosa e ao Departamento de Fitopatologia, pela oportunidade em realizar este curso; Aos professores do Departamento de Fitopatologia pelos ensinamentos; Ao Conselho Nacional de Desenvolvimento Científico e Tecnológico (CNPq) pela concessão da bolsa de estudos; Ao Prof. Olinto Liparini Pereira pela orientação e disponibilidade, pela confiança, amizade, pelo apoio, estímulo e empréstimo de material bibliográfico; Ao Prof. Robert Weingart Barreto, por disponibilizar os equipamentos da Clínica de Doenças de Plantas para realização do trabalho, empréstimo de material bibliográfico e pelas sugestões, indispensáveis para a realização deste trabalho; Ao D.Sc. Walnir Gomes Ferreira Júnior pelo apoio durante a coleta de material botânico, identificação das espécies botânicas, sugestões e empréstimo de referências bibliográficas para a melhoria do trabalho; Ao Sebastião -
A Checklist for Identifying Meliolales Species
Mycosphere 8(1): 218–359 (2017) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/8/1/16 Copyright © Guizhou Academy of Agricultural Sciences A checklist for identifying Meliolales species Zeng XY1,2,3, Zhao JJ1, Hongsanan S2, Chomnunti P2,3, Boonmee S2, and Wen TC1* 1The Engineering Research Center of Southwest Bio-Pharmaceutical Resources, Ministry of Education, Guizhou University, Guiyang 550025, China 2Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand 3School of Science, Mae Fah Luang University, Chiang Rai 57100, Thailand Zeng XY, Zhao JJ, Hongsanan S, Chomnunti P, Boonmee S, Wen TC 2017 – A checklist for identifying Meliolales species. Mycosphere 8(1), 218–359, Doi 10.5943/mycosphere/8/1/16 Abstract Meliolales is the largest order of epifoliar fungi, characterized by branched, dark brown, superficial mycelium with two-celled hyphopodia; superficial, globose to subglobose, dark brown perithecia, and septate, dark brown ascospores. The assumption of host-specificity means this group a highly diverse and it is imperative to identify the host before attempting to identify a fungal collection. This paper has compiled information from fungal and plant databases, including all fungal species of Meliolales and their host information from protologues. Current names of plants and corresponding fungi with integration of their synonyms are made into an alphabetical checklist, and references are provided. Exclusions and spelling conflicts of fungal species are also listed. Statistics show that the order comprises 2403 species (including 106 uncertain species), infecting among 194 host families, with an additional 20 excluded records. This checklist will be useful for the future identifications and classifications of Meliolales. -
26 August Ig6o Boedijn Hague Proposed Loculoascomycetes
PERSOONIA Published by the Rijksherbarium, Leiden Part Volume I, 4, pp. 393-404 (1961) Notes on the Meliolales K.B. Boedijn The Hague (With 24 Text-figures) A brief review of the Meliolales is given, mainly based on Indonesian material. It is concluded that the order should be retained in the Loculo- it is the The ascomycetes, where closely related to Microthyriales. genus Neoballadyna (Englerulaceae) and the species Balladyna pavettae are described butleri is combination. as new, Neoballadyna proposed as a new In the old classifications Meliola and allied in the order generawere always placed Perisporiales. Subsequent investigations have shown that Perisporium does not belong in this order as it was often delimited. So the name had to be changed and was replaced by the designation Erysiphales. The Erysiphaceae now incorporated in this order, however, have nothing in common with the old members of the Peri- So has chosen the sporiales. once more renaming was necessary and Martin (26) name Meliolales. He placed in this order two families viz. Meliolaceae and Englerulaceae. till this order considered the subclass Up now was to belong to Loculoascomycetes. Recently von Arx after of the member of the Melio- (2), a study genus Armatella, a laceae, came to the conclusion that we are dealing here with a true representative to of the subclass Euascomycetes. The family Meliolaceae was transferred by him well the order Sphaeriales. He came to this conclusion because Armatella as as Meliola have thin-walled, seemingly unitunicate asci, whereas in the first mentioned genus he saw what he assumed to be true paraphyses. -
Mycosphere Notes 225–274: Types and Other Specimens of Some Genera of Ascomycota
Mycosphere 9(4): 647–754 (2018) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/9/4/3 Copyright © Guizhou Academy of Agricultural Sciences Mycosphere Notes 225–274: types and other specimens of some genera of Ascomycota Doilom M1,2,3, Hyde KD2,3,6, Phookamsak R1,2,3, Dai DQ4,, Tang LZ4,14, Hongsanan S5, Chomnunti P6, Boonmee S6, Dayarathne MC6, Li WJ6, Thambugala KM6, Perera RH 6, Daranagama DA6,13, Norphanphoun C6, Konta S6, Dong W6,7, Ertz D8,9, Phillips AJL10, McKenzie EHC11, Vinit K6,7, Ariyawansa HA12, Jones EBG7, Mortimer PE2, Xu JC2,3, Promputtha I1 1 Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand 2 Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, 132 Lanhei Road, Kunming 650201, China 3 World Agro Forestry Centre, East and Central Asia, 132 Lanhei Road, Kunming 650201, Yunnan Province, People’s Republic of China 4 Center for Yunnan Plateau Biological Resources Protection and Utilization, College of Biological Resource and Food Engineering, Qujing Normal University, Qujing, Yunnan 655011, China 5 Shenzhen Key Laboratory of Microbial Genetic Engineering, College of Life Sciences and Oceanography, Shenzhen University, Shenzhen 518060, China 6 Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand 7 Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University, Chiang Mai 50200, Thailand 8 Department Research (BT), Botanic Garden Meise, Nieuwelaan 38, BE-1860 Meise, Belgium 9 Direction Générale de l'Enseignement non obligatoire et de la Recherche scientifique, Fédération Wallonie-Bruxelles, Rue A. -
Checklist of Cladosporium Species Reported from Turkey
CBÜ Fen Bil. Dergi., Cilt 12, Sayı 2, 221-229 s CBU J. of Sci., Volume 12, Issue 2, p 221-229 Checklist of Cladosporium Species Reported from Turkey Ahmet Asan1, Evrim Özkale2, Fatih Kalyoncu3* 1Trakya University, Faculty of Science, Department of Biology, Edirne, Turkey 2Celal Bayar University, Faculty of Science and Letters, Dept. of Biology, Manisa, Turkey 3Celal Bayar University, Faculty of Science and Letters, Dept. of Biology, Manisa, Turkey [email protected] *Corresponding author / İletişimden sorumlu yazar Geliş / Recieved: 15 Haziran (June) 2016 Kabul / Accepted: 12 Ağustos (August) 2016 DOI: http://dx.doi.org/10.18466/cbujos.47932 Abstract Cladosporium species are common in nature (air, soil, etc.) and can be allergenic on human. The purpose of this study is to document the Cladosporium species isolated from Turkey with their subtrates and/or habitat. This checklist reviews approximately 114 published findings and presents a list of Cladosporium species. According to the present publications, 33 Cladosporium species have been recorded with various subtrates/habitats in Turkey. Among these species, Cladosporium herbarum and Cladosporium cladosporioides are the most common species reported from Turkey. The other species are Cladosporium acaciicola, C. aecidiicola, C. apicale, C. asterinae, C. brassicae, C. britannicum, C. carpophilum, C. chlorocephalum, C. colocasiae, C. cucumerinum, C. elatum, C. fulvum, C. gallicola, C. macrocarpum, C. musae, C. nigrellum, C. obtectum, C. orchidaceraum, C. orchidis, C. ornithogali, C. oxysporum, C. ramotenellum, C. resinae, C. sinuosum, C. sphaerospermum, C. spongiosum, C. tenuissimum, C. trichoides, C. uredinicola and C. variabile. The oldest literature is belonging to the year of 1952. -
The Phylogeny of Plant and Animal Pathogens in the Ascomycota
Physiological and Molecular Plant Pathology (2001) 59, 165±187 doi:10.1006/pmpp.2001.0355, available online at http://www.idealibrary.com on MINI-REVIEW The phylogeny of plant and animal pathogens in the Ascomycota MARY L. BERBEE* Department of Botany, University of British Columbia, 6270 University Blvd, Vancouver, BC V6T 1Z4, Canada (Accepted for publication August 2001) What makes a fungus pathogenic? In this review, phylogenetic inference is used to speculate on the evolution of plant and animal pathogens in the fungal Phylum Ascomycota. A phylogeny is presented using 297 18S ribosomal DNA sequences from GenBank and it is shown that most known plant pathogens are concentrated in four classes in the Ascomycota. Animal pathogens are also concentrated, but in two ascomycete classes that contain few, if any, plant pathogens. Rather than appearing as a constant character of a class, the ability to cause disease in plants and animals was gained and lost repeatedly. The genes that code for some traits involved in pathogenicity or virulence have been cloned and characterized, and so the evolutionary relationships of a few of the genes for enzymes and toxins known to play roles in diseases were explored. In general, these genes are too narrowly distributed and too recent in origin to explain the broad patterns of origin of pathogens. Co-evolution could potentially be part of an explanation for phylogenetic patterns of pathogenesis. Robust phylogenies not only of the fungi, but also of host plants and animals are becoming available, allowing for critical analysis of the nature of co-evolutionary warfare. Host animals, particularly human hosts have had little obvious eect on fungal evolution and most cases of fungal disease in humans appear to represent an evolutionary dead end for the fungus. -
1 Check-List of Cladosporium Names Frank M. DUGAN, Konstanze
Check-list of Cladosporium names Frank M. DUGAN , Konstanze SCHUBERT & Uwe BRAUN Abstract: DUGAN , F.M., SCHUBERT , K. & BRAUN ; U. (2004): Check-list of Cladosporium names. Schlechtendalia 11 : 1–119. Names of species and subspecific taxa referred to the hyphomycetous genus Cladosporium are listed. Citations for original descriptions, types, synonyms, teleomorphs (if known), references of important redescriptions in literature, illustrations as well as notes are given. This list contains data of 772 taxa, i.e., valid, invalid and illegitime species, varieties and formae as well as herbarium names. Zusammenfassung: DUGAN , F.M., SCHUBERT , K. & BRAUN ; U. (2004): Checkliste der Cladosporium -Namen. Schlechtendalia 11 : 1–119. Namen von Arten und subspezifischen Taxa der Hyphomycetengattung Cladosporium werden aufgelistet. Bibliographische Angaben zur Erstbeschreibung, Typusangaben, Synonyme, die Teleomorphe (falls bekannt), wichtige Literaturhinweise und Abbildungen sowie Anmerkungen werden angegeben. Die vorliegende Liste enthält Namen von 772 Taxa, d. h. gültige, ungültige und illegitime Arten, Varietäten, Formen und auch Herbarnamen. Introduction: Cladosporium Link (LINK 1816) is one of the largest genera of hyphomycetes, comprising more than 772 names, but also one of the most heterogeneous ones, which is not very surprising since all early circumscriptions and delimitations from similar genera were rather vague and imprecise (FRIES 1832, 1849; SACCARDO 1886; LINDAU 1907, etc.). All kinds of superficially similar cladosporioid fungi, i.e., amero- to phragmosporous dematiaceous hyphomycetes with conidia formed in acropetal chains, were assigned to Cladosporium s. lat., ranging from saprobes to plant pathogens as well as human-pathogenic taxa. DE VRIES (1952) and ELLIS (1971, 1976) maintained broad concepts of Cladosporium . ARX (1983), MORGAN - JONES & JACOBSEN (1988), MCKEMY & MORGAN -JONES (1990), MORGAN -JONES & MCKEMY (1990) and DAVID (1997) discussed the heterogeneity of Cladosporium and contributed towards a more natural circumscription of this genus. -
View of Bitunicate Ascomycetes, and Transferred Helochora to Mesnieraceae
Fungal Diversity Two new genera in the Phyllachoraceae: Sphaerodothella to accommodate Sphaerodothis danthoniae, and Parberya gen. novo Ceridwen A. Pearce1 and Kevin D. Hyde2 IAustralian Tropical Mycology Research Centre, PO Box 312, Kuranda, 4872, Queensland, Australia; e-mail: [email protected] 2Centre for Research in Fungal Diversity, Department of Ecology and Biodiversity, The University of Hong Kong, Pokfulam Road, Hong Kong Pearce, CA. and Hyde, K.D. (200 I). Two new genera in the Phyllachoraceae: Sphaerodothella to accommodate Sphaerodothis danthoniae, and Parberya gen. novoFungal Diversity 6: 83-97. Sphaerodothis danthoniae produces black tar spots on leaves and culms of Danthonia spp. It is redescribed and illustrated in a new genus Sphaerodothella. Sphaerodothella danthoniae differs from Sphaerodothis in having a peridium composed of hyaline to brown, thin-walled, flattened fungal cells which merge with host cells, rather than a distinct stroma of melanised textura globosa, and pale brown ascospores which have a distinctive dark brown mucilaginous perisporium. Parberya is described for a new species of tar spot fungi, P. kosciuskoa, found on Danthonia pallid a from Mt. Kosciusko, Australia, and to accommodate Sphaerodothis arxii P.F. Cannon on Pentameris sp. Parberya are typical phyllachoraceous tar spot fungi on grasses, which have distinctive golden-brown ascospores omamented with short, blunt spines. The previously undescribed andromorph of Parberya arxii is also described. Keywords: Anthostomella danthoniae, Danthonia, foliicolous fungi, Poaceae, Sphaerodothis arxii, tar spots, taxonomy. Introduction The Phyllachoraceae are generally plant parasites, characterised by ascohymenial development with paraphyses, thin-walled asci, which may have an apical apparatus that does not stain blue in iodine, and ascospores which are often hyaline and one-celled (Cannon, 1991).