View of Bitunicate Ascomycetes, and Transferred Helochora to Mesnieraceae
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STUDIES ON FOLIICOLOUS FUNGI ASSOCIATED WITH SOME PLANTS DISSERTATION SUBMITTED IN PARTIAL FULFILMENT OF THE REQUIREMENTS FOR THE AWARD OF THE DEGREE OF e iHasfter of $I|iIos;opf)p JSotanp (PLANT PATHOLOGY) BY J4thar J^ll ganU DEPARTMENT OF BOTANY ALIGARH MUSLIM UNIVERSITY ALIQARH (INDIA) 2010 s*\ %^ (^/jyr, .ii -^^fffti UnWei* 2 6 OCT k^^ ^ Dedictded To Prof. Mohd, Farooq Azam 91-0571-2700920 Extn-3303 M.Sc, Ph.D. (AUg.), FNSI Ph: 91-0571-2702016(0) 91-0571-2403503 (R) Professor of Botany 09358256574(M) (Plant Nematology) E-mail: [email protected](aHahoo.coin [email protected] Ex-Vice-President, Nematological Society of India. Department of Botany Aligarh Muslim University Aligarh-202002 (U.P.) India Date: z;. t> 2.AI0 Certificate This is to certify that the dissertation entitled """^Studies onfoUicolous fungi associated with some plants** submitted to the Department of Botany, Aligarh Muslim University, Aligarh in the partial fulfillment of the requirements for the award of the degree of Master of Philosophy (Plant pathology), is a bonafide work carried out by Mr. Athar Ali Ganie under my supervision. (Prof. Mohd Farooq Azam) Residence: 4/35, "AL-FAROOQ", Bargad House Connpound, Dodhpur, Civil Lines, Aligarh-202002 (U.P.) INDIA. ACKNOWLEDQEMEKT 'First I Sow in reverence to Jifmigfity JlLL.^Jf tfie omnipresent, whose Blessings provided me a [ot of energy and encouragement in accomplishing the tas^ Wo 600^ is ever written in soCitude and no research endeavour is carried out in solitude, I ma^ use of this precious opportunity to express my heartfelt gratitude andsincerest than^ to my learned teacher and supervisor ^rof. -
Mycosphere Notes 225–274: Types and Other Specimens of Some Genera of Ascomycota
Mycosphere 9(4): 647–754 (2018) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/9/4/3 Copyright © Guizhou Academy of Agricultural Sciences Mycosphere Notes 225–274: types and other specimens of some genera of Ascomycota Doilom M1,2,3, Hyde KD2,3,6, Phookamsak R1,2,3, Dai DQ4,, Tang LZ4,14, Hongsanan S5, Chomnunti P6, Boonmee S6, Dayarathne MC6, Li WJ6, Thambugala KM6, Perera RH 6, Daranagama DA6,13, Norphanphoun C6, Konta S6, Dong W6,7, Ertz D8,9, Phillips AJL10, McKenzie EHC11, Vinit K6,7, Ariyawansa HA12, Jones EBG7, Mortimer PE2, Xu JC2,3, Promputtha I1 1 Department of Biology, Faculty of Science, Chiang Mai University, Chiang Mai 50200, Thailand 2 Key Laboratory for Plant Diversity and Biogeography of East Asia, Kunming Institute of Botany, Chinese Academy of Sciences, 132 Lanhei Road, Kunming 650201, China 3 World Agro Forestry Centre, East and Central Asia, 132 Lanhei Road, Kunming 650201, Yunnan Province, People’s Republic of China 4 Center for Yunnan Plateau Biological Resources Protection and Utilization, College of Biological Resource and Food Engineering, Qujing Normal University, Qujing, Yunnan 655011, China 5 Shenzhen Key Laboratory of Microbial Genetic Engineering, College of Life Sciences and Oceanography, Shenzhen University, Shenzhen 518060, China 6 Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand 7 Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University, Chiang Mai 50200, Thailand 8 Department Research (BT), Botanic Garden Meise, Nieuwelaan 38, BE-1860 Meise, Belgium 9 Direction Générale de l'Enseignement non obligatoire et de la Recherche scientifique, Fédération Wallonie-Bruxelles, Rue A. -
Contribution to the Phylogeny and a New Species of Coccodiella (Phyllachorales)
Mycol Progress https://doi.org/10.1007/s11557-017-1353-6 ORIGINAL ARTICLE Contribution to the phylogeny and a new species of Coccodiella (Phyllachorales) M. Mardones1,2 & T. Trampe-Jaschik 1 & T. A. Hofmann3 & M. Piepenbring1 Received: 14 July 2017 /Revised: 17 October 2017 /Accepted: 23 October 2017 # German Mycological Society and Springer-Verlag GmbH Germany 2017 Abstract Coccodiella is a genus of plant-parasitic species in spot fungi with superficial or erumpent perithecia seem to be the family Phyllachoraceae (Phyllachorales, Ascomycota), restricted to the family Phyllachoraceae, independently of the i.e., tropical tar spot fungi. Members of the genus Coccodiella host plant. We also discuss the biodiversity and host-plant pat- are tropical in distribution and are host-specific, growing on terns of species of Coccodiella worldwide. plant species belonging to nine host plant families. Most of the known species occur on various genera and species of the Keywords Coccodiella calatheae . Phyllachoraceae . Plant Melastomataceae in tropical America. In this study, we describe parasites . Tar spot fungi . Phyllachora . Marantaceae . the new species C. calatheae from Panama, growing on Zingiberales Calathea crotalifera (Marantaceae). We obtained ITS, nrLSU, and nrSSU sequence data from this new species and from other freshly collected specimens of five species of Coccodiella on Introduction members of Melastomataceae from Ecuador and Panama. Phylogenetic analyses allowed us to confirm the placement of Hara (1911) introduced the genus Coccodiella for a plant- Coccodiella within Phyllachoraceae, as well as the monophyly parasitic species characterized by a stroma originating in the of the genus. The phylogeny of representative species within mesophyll, which then proliferates through the lower epider- the family Phyllachoraceae, including Coccodiella spp., mis, forming a sessile hypostroma attached to the host tissue. -
Myconet Volume 14 Part One. Outine of Ascomycota – 2009 Part Two
(topsheet) Myconet Volume 14 Part One. Outine of Ascomycota – 2009 Part Two. Notes on ascomycete systematics. Nos. 4751 – 5113. Fieldiana, Botany H. Thorsten Lumbsch Dept. of Botany Field Museum 1400 S. Lake Shore Dr. Chicago, IL 60605 (312) 665-7881 fax: 312-665-7158 e-mail: [email protected] Sabine M. Huhndorf Dept. of Botany Field Museum 1400 S. Lake Shore Dr. Chicago, IL 60605 (312) 665-7855 fax: 312-665-7158 e-mail: [email protected] 1 (cover page) FIELDIANA Botany NEW SERIES NO 00 Myconet Volume 14 Part One. Outine of Ascomycota – 2009 Part Two. Notes on ascomycete systematics. Nos. 4751 – 5113 H. Thorsten Lumbsch Sabine M. Huhndorf [Date] Publication 0000 PUBLISHED BY THE FIELD MUSEUM OF NATURAL HISTORY 2 Table of Contents Abstract Part One. Outline of Ascomycota - 2009 Introduction Literature Cited Index to Ascomycota Subphylum Taphrinomycotina Class Neolectomycetes Class Pneumocystidomycetes Class Schizosaccharomycetes Class Taphrinomycetes Subphylum Saccharomycotina Class Saccharomycetes Subphylum Pezizomycotina Class Arthoniomycetes Class Dothideomycetes Subclass Dothideomycetidae Subclass Pleosporomycetidae Dothideomycetes incertae sedis: orders, families, genera Class Eurotiomycetes Subclass Chaetothyriomycetidae Subclass Eurotiomycetidae Subclass Mycocaliciomycetidae Class Geoglossomycetes Class Laboulbeniomycetes Class Lecanoromycetes Subclass Acarosporomycetidae Subclass Lecanoromycetidae Subclass Ostropomycetidae 3 Lecanoromycetes incertae sedis: orders, genera Class Leotiomycetes Leotiomycetes incertae sedis: families, genera Class Lichinomycetes Class Orbiliomycetes Class Pezizomycetes Class Sordariomycetes Subclass Hypocreomycetidae Subclass Sordariomycetidae Subclass Xylariomycetidae Sordariomycetes incertae sedis: orders, families, genera Pezizomycotina incertae sedis: orders, families Part Two. Notes on ascomycete systematics. Nos. 4751 – 5113 Introduction Literature Cited 4 Abstract Part One presents the current classification that includes all accepted genera and higher taxa above the generic level in the phylum Ascomycota. -
Aberystwyth University Factors Affecting the Local
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Aberystwyth Research Portal Aberystwyth University Factors affecting the local distribution of Polystigma rubrum stromata on Prunus spinosa Roberts, Hattie Rose; Pidcock, Sara Elizabeth; Redhead, Sky C.; Richards, Emily; O’Shaughnessy, Kevin; Douglas, Brian; Griffith, Gareth Published in: Plant Ecology and Evolution DOI: 10.5091/plecevo.2018.1442 Publication date: 2018 Citation for published version (APA): Roberts, H. R., Pidcock, S. E., Redhead, S. C., Richards, E., O’Shaughnessy, K., Douglas, B., & Griffith, G. (2018). Factors affecting the local distribution of Polystigma rubrum stromata on Prunus spinosa. Plant Ecology and Evolution, 151(2), 278-283. https://doi.org/10.5091/plecevo.2018.1442 General rights Copyright and moral rights for the publications made accessible in the Aberystwyth Research Portal (the Institutional Repository) are retained by the authors and/or other copyright owners and it is a condition of accessing publications that users recognise and abide by the legal requirements associated with these rights. • Users may download and print one copy of any publication from the Aberystwyth Research Portal for the purpose of private study or research. • You may not further distribute the material or use it for any profit-making activity or commercial gain • You may freely distribute the URL identifying the publication in the Aberystwyth Research Portal Take down policy If you believe that this document breaches copyright please contact us providing details, and we will remove access to the work immediately and investigate your claim. tel: +44 1970 62 2400 email: [email protected] Download date: 03. -
A Morpho-Molecular Re-Appraisal of Polystigma Fulvum and P. Rubrum (Polystigma, Polystigmataceae)
Phytotaxa 422 (3): 209–224 ISSN 1179-3155 (print edition) https://www.mapress.com/j/pt/ PHYTOTAXA Copyright © 2019 Magnolia Press Article ISSN 1179-3163 (online edition) https://doi.org/10.11646/phytotaxa.422.3.1 A morpho-molecular re-appraisal of Polystigma fulvum and P. rubrum (Polystigma, Polystigmataceae) DIGVIJAYINI BUNDHUN1,2, RAJESH JEEWON3, MONIKA C. DAYARATHNE1,4,5, TIMUR S. BULGAKOV6, ALEXANDER K. KHRAMTSOV7, JANITH V.S. ALUTHMUHANDIRAM8, DHANDEVI PEM1, CHAIWAT TO- ANUN2 & KEVIN D. HYDE1,4,5* 1 Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand 2 Division of Plant Pathology, Department of Entomology and Plant Pathology, Faculty of Agriculture, Chiang Mai University, Chiang Mai 50200, Thailand 3 Department of Health Sciences, Faculty of Science, University of Mauritius, Reduit, Mauritius 4 World Agroforestry Centre East and Central Asia Office, 132 Lanhei Road, Kunming 650201, China 5 Key Laboratory for Plant Biodiversity and Biogeography of East Asia (KLPB), Kunming Institute of Botany, Chinese Academy of Sci- ence, Kunming 650201, Yunnan, China 6 Russian Research Institute of Floriculture and Subtropical Crops, 2/28 Yana Fabritsiusa Street, Sochi 354002, Krasnodar region, Rus- sia 7 Department of Botany, Belarusian State University, 4 Nezavisimosti Av., Minsk 220030, Belarus 8 Beijing Key Laboratory of Environment Friendly Management on Fruit Diseases and Pests in North China, Institute of Plant and Envi- ronment Protection, Beijing Academy of Agriculture and Forestry Sciences, Beijing, China * Corresponding author: KEVIN D. HYDE, [email protected] Abstract Collections of eleven Prunus specimens infected with Polystigma species from Belarus and Russia yielded two existing taxa: Polystigma fulvum (sexual morph) and Polystigma rubrum (asexual morph). -
Managing Mycological Mysteries
Managing Mycological Mysteries (Systematics and the Identification of Fungi) NPDN meeting March 2016 Megan Romberg USDA APHIS PPQ PHP NIS APHIS APHIS NIS CPHST Beltsville Beltsville APHIS NIS (Mycology) APHIS CPHST Beltsville Beltsville (580) • Fungal Identification • Diagnostic assay • Samples received from development ports– Urgents = same day • Samples received from turnaround states • Samples received from • Final confirmation of new states ‐> Final confirmation to US (or state) pathogens of new to US (or new to for which specific state) fungi (morphology diagnostic assays exist and and sequence supported Phytophthora spp. identifications) tricorder est. # fungal species # species described # fungal taxa in GenBank Detection Identification Question answered: Question answered: Is a specific organism present or What organism is this? absent? Involves using a diagnostic test like a PCR Involves comparison of characters assay, ELISA, LAMP, CANARY, etc. observed to the those reported from the universe of possible organisms. • Names organisms Systematics • describes them Taxonomy • provides classifications for the organisms • investigates their evolutionary histories (phylogeny) • considers their environmental adaptations Nomenclature involves the rules about which names should be used for a given organism. Of the 287 genera of fungi identified by NIS between 2013 and 2015, 16% had no sequence representation in GenBank est. # fungal species # species described # fungal taxa in GenBank Systematics provides a framework to which an unknown can be compared. 1. Good sequences exist, good systematic framework exists, species ID possible both morphologically and molecularly. (Puccinia spp. on Alcea) 2. No sequences exist or very few/poor coverage, good taxonomic framework exists, species ID possible via morphology, (but phylogenetic placement unknown, may be a species complex) (Phyllachora maydis) 3. -
Systematics and Diversity of the Phyllachoraceae Associated with Rosaceae, with a Monograph of Polysiigma
Systematics and diversity of the Phyllachoraceae associated with Rosaceae, with a monograph of Polysiigma P.F.CANNON International Mycological Institute, Bakeham Lane, Egham, Surrey TW20 9TY, U.K. Biotrophic members of the Phyllachoraceae are described and illustrated, and their nomenclature assessed. Isothea is considered to be a monotypic genus with close affinities to Phyllachora. Four species of Phyllachora are accepted; some have distinctive features which may provide evidence for subdivision of that genus. Two species currently referred to Plectosphaera are studied; neither is a typical biotroph. Polysiigma is formally monographed. Five species are accepted, all on species of Prunus, including the previously undescribed P. amygdalinum, an economically important pathogen of almond (Prunus dulcis). An eastern Russian species originally described in Polystigmella is treated as a subspecies of the widespread plum pathogen Polysiigma rubrum. A number of species names is excluded from the Phyllachoraceae. Biotrophic representatives of the Phyllachoraceae associated ISOTHEA with species of Rosaceae appear to be relatively small in Isothea Fr., Summa Vegetabilium Scandinaoiae: 421, 1849. number (12 species of fungi known from 3100 plant species), Isothea was erected for the single species Sphaeria rhytismoides but include a number of economically important taxa. The C. Bab. ex Berk, (non Corda). Five or six further taxa have been important genus Glomerella (anamorph Collelotrichum) also has transferred to Isothea by different authors, but none is well- several important representatives associated with Rosaceae, known. It is not obvious from the original description why but species of this genus are necrotrophic or saprobic for at Fries regarded the genus as distinct, but at that period many least most of their life cycle, and species concepts as currently of the genera now currently accepted were either not yet recognized are not comparable (Cannon, in press). -
The Journal Ol the Department Ot Agriculture
TheJournal olthe Department otAgriculture OF PORTO RICO Puhlished ltuartcrly: January, April, July and October of each year l\IELVILLE T, COOK, Ennon VoL. XIV OCTOBER 1030 No. 4 MYCOLOGICAL EXPLORATIONS OF COLOMBIA. C.\.RLOS E. CIT,\RDOX antl Il.\1".U:L A. TORO rrhe scope of the pre<:,ent paper is to hring up to-date our present knmvleclge of the fungus flora of Colomhia, by revie"·ing the litera ture on the subject, fol101vedby a critical study, in collaboration with various specialists, of collections made by the authors during the years 1926-29, and the preparation of a preliminary host index. It would 1'e pretentious for the ,niters to attempt to coYer the entire fiel<l of ·systematic mycology of such a Yast and little explored country m; Colombia. with such varied topographical and climatological features ·which explain it~ enormously rich flora. All that ma} lJe accomplished here is to more- or less superficially coYer som,::· groups of fungi, in an attempt to make this paper a starting point for the study of thr fnugous f-\ora of Colombia, wltfr·h may l,0 helpful to students subsequently interested in the 'sub.ject. A few species from Panam{l, collected by the senior writer, are also ineluded in this paper. The senior ·writer became interested in Colombia in 1926. At the invitation of the governor of the department of Antioquia, Ii visit was made to l\Iedellin, to reorganize the '' Escuela Superior de Agricultura y Veterinarin ". This first trip is shown in the enclosed map (Fig:. I). -
Palm Leaf Fungi in Portugal: Ecological, Morphological and Phylogenetic Approaches
UNIVERSIDADE DE LISBOA FACULDADE DE CIÊNCIAS DEPARTAMENTO DE BIOLOGIA VEGETAL Palm leaf fungi in Portugal: ecological, morphological and phylogenetic approaches Diogo Rafael Santos Pereira Mestrado em Microbiologia Aplicada Dissertação orientada por: Alan John Lander Phillips Rogério Paulo de Andrade Tenreiro 2019 This Dissertation was fully performed at Lab Bugworkers | M&B-BioISI, Biosystems & Integrative Sciences Institute, under the direct supervision of Principal Investigator Alan John Lander Phillips Professor Rogério Paulo de Andrade Tenreiro was the internal supervisor designated in the scope of the Master in Applied Microbiology of the Faculty of Sciences of the University of Lisbon To my grandpa, our little old man Acknowledgments This dissertation would not have been possible without the support and commitment of all the people (direct or indirectly) involved and to whom I sincerely thank. Firstly, I would like to express my deepest appreciation to my supervisor, Professor Alan Phillips, for all his dedication, motivation and enthusiasm throughout this long year. I am grateful for always push me to my limits, squeeze the best from my interest in Mycology and letting me explore a new world of concepts and ideas. Your expertise, attentiveness and endless patience pushed me to be a better investigator, and hopefully a better mycologist. You made my MSc dissertation year be beyond better than everything I would expect it to be. Most of all, I want to thank you for believing in me as someone who would be able to achieve certain goals, even when I doubt it, and for guiding me towards them. Thank you for always teaching me, above all, to make the right question with the care and accuracy that Mycology demands, which is probably the most important lesson I have acquired from this dissertation year. -
End-40-75 (Endode-Endope) Mohammed AL- Hamdany
الموسوعة العربية ﻷمراض النبات والفطريات Arabic Encyclopedia of Plant Pathology &Fungi إعداد الدكتور محمد عبد الخالق الحمداني Mohammed AL- Hamdany End-40-75 (Endode-Endope) Contents Codes Page No. Table of contents 1 Endod… Endodermophyton End-40 2 Endodesmia (Broomeola) End-41 4 Endodesmidium Canter 1949 End-42 5 Endodothella ( Phyllachora ) End-43 6 Endodothiora Petr., 1929. End-44 19 Endodromia ( Echinostelium) End-45 21 Endog Endogenospora R.F. Castañeda, O. Morillo & Minter, 2010. End-46 22 Endogenous Inoculum End-47 24 Endogloea (Phomopsis) End-48 25 Endogonaceae End-49 34 Endogonales End-50 35 Endogone Link, 1809. End-51 36 Endogonella (Claziella) End-52 39 Endogonomycetes End-53 41 Endogonopsidaceae End-54 41 Endogonopsis R. Heim, 1966. End-55 42 Endoh… Endohormidium ( Corynelia) End-56 43 Endohyalina Marbach, 2000. End-57 46 Endol… Endolepiotula Singer, 1963. End-58 49 Endolpidium (Olipdium ) End-59 52 Endom…. 1 Endomelanconiopsidaceae End-60 55 Endomelanconiopsis E.I. Rojas & Samuels,2008 End-61 56 Endomelanconium Petr., 1940. End-62 58 Endomeliola S. Hughes & Piroz.,. 1994. End-63 60 Endomyces Reess, Bot. 1870 End-64 62 Endomycetaceae End-65 64 Endomycetales End-66 66 Endomycodes Delitsch, 1943 End-67 67 Endomycopsella End-68 68 Endomycopsis (Saccharomycopsis) End-69 70 Endomycorrhizae End-70 73 Endon… Endonema ( Pascherinema) End-71 75 Endonevrum (Mycenastrum) End-72 77 Endopa-Endope Endoparasites End-73 79 Endoparasitic Nematodes End-74 80 Endoperplexa P. Roberts,1993 End-75 82 References 85 End-40. الجنس الكيسي المختلف عليهEndodermophyton أقرت قانونية إسم الجنس الكيسي Endodermophyton Castell., 1910 وأنواعه الثمانية بضمنها النوع اﻷصلي Endodermophyton castellanii (Perry) Castell. -
Tar Spot Fungi from Thailand
Mycosphere 8(8): 1054–1058 (2017) www.mycosphere.org ISSN 2077 7019 Article Doi 10.5943/mycosphere/8/8/6 Copyright © Guizhou Academy of Agricultural Sciences Tar spot fungi from Thailand Tamakaew N1, Maharachchikumbura SSN2, Hyde KD3, 4 and Cheewangkoon R1* 1Entomology and Plant Pathology Department, Faculty of Agriculture, Chiang Mai University 2Department of Crop Sciences, College of Agricultural and Marine Sciences, Sultan Qaboos University, P.O. Box 8, 123, Al Khoud, Oman. 3Center of Excellence in Fungal Research, Mae Fah Luang University, Chiang Rai 57100, Thailand 4World Agroforestry Centre, East and Central Asia, 132 Lanhei Road, Kunming 650201, China Tamakaew N, Maharachchikumbura SSN, Hyde KD, Cheewangkoon R. 2017 – Tar spot fungi from Thailand. Mycosphere 8(8), 1054–1058, Doi 10.5943/mycosphere/8/8/6 Abstract Phyllachora species are responsible for leaf tar spot disease in a wide range of hosts, worldwide. We are studying the phyllachoraceous taxa in northern Thailand. In this paper, we report on two taxa collected from symptomatic graminicolous leaves collected during 2015-2016. The taxa are shown to be novel based on morphological and sequence data and introduced here as Phyllachora thysanolaenae collected from Thysanolaena maxima and Phyllachora vetiveriana from Chysopogon zizanioides. Descriptions, illustrations and molecular data are provided for the new species which are discussed with comparable taxa. Key words – Phyllachora – tar spot Introduction Species of Phyllachoraceae are most obligate parasites, producing black “tar spots” on leaves and occasionally stems and fruits of a variety of host plant families with most taxa presumed to be host-specific (Cannon 1997). This family comprises more than a thousand species worldwide, with Phyllachora as the type genus (Parbery 1978, Kirk et.