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Supplementary Tables Table S1 Sample Identifying Information And Supplementary tables Table S1 Sample identifying information and read statistics accession sample #raw #clean Sample MID FwdPrimer RvPrimer run number ID site reads reads 20100831.P4S.1 ACACGAGA ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 1 SRR1023739 P4S.910 Palsa 3831 2893 20100831.P4M.1 ACATAGCA ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 1 SRR1023739 P4M.910 Palsa 2047 1729 20100831.P4D.1 ACGATACA ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 1 SRR1023739 P4D.910 Palsa 3221 2543 20100831.B4S.1 ACTGCTCA ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 1 SRR1023739 B4S.910 Bog 1971 1366 20100831.B4M.1 AGCAGCGC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 1 SRR1023739 B4M.910 Bog 5530 5251 20100831.B4D.1 AGCGTGCA ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 1 SRR1023739 B4D.910 Bog 4296 4143 20100831.F4S.1 AGTCTAGC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 1 SRR1023739 F4S.910 Fen* 2716 1890 20100831.F4M.1 ATGACTGA ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 1 SRR1023739 F4M.910 Fen* 5005 3987 20100831.F4D.1 ATGCACGC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 1 SRR1023739 F4D.910 Fen* 2870 2384 20100901.P1S.2 ACTGAT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 2 SRR1023740 P1S.910 Palsa 1170 662 20100901.P2S.2 ATGTGT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 2 SRR1023740 P2S.910 Palsa 1320 923 20100901.P3S.2 CACAGT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 2 SRR1023740 P3S.910 Palsa 857 656 20100901.P2M.2 CACTAC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 2 SRR1023740 P2M.910 Palsa 1077 881 20100901.P3M.2 CAGCAT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 2 SRR1023740 P3M.910 Palsa 2032 1474 20100901.P1D.2 CTAGAGC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 2 SRR1023740 P1D.910 Palsa 1267 1028 20100901.P2D.2 CAGAGC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 2 SRR1023740 P2D.910 Palsa 1565 1309 20100901.P3D.2 CTGCGC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 2 SRR1023740 P3D.910 Palsa 896 709 20100901.B1S.2 CACGAT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 2 SRR1023740 B1S.910 Bog 1069 739 20100901.B2S.2 TAGCGC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 2 SRR1023740 B2S.910 Bog 1259 917 20100901.B3S.2 TATGAC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 2 SRR1023740 B3S.910 Bog 1105 796 20100901.B1M.2 CTGTAC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 2 SRR1023740 B1M.910 Bog 1421 1219 20100901.B2M.2 TAGTAC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 2 SRR1023740 B2M.910 Bog 1128 1007 20100901.B3M.2 TCATAC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 2 SRR1023740 B3M.910 Bog 1492 1143 20100901.B1D.2 TACTGC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 2 SRR1023740 B1D.910 Bog 1576 1395 20100901.B2D.2 TATAGC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 2 SRR1023740 B2D.910 Bog 1133 1020 20100901.B3D.2 ACACTGC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 2 SRR1023740 B3D.910 Bog 1071 943 20100901.F1S.2 ACATAGT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 2 SRR1023740 F1S.910 Fen 3021 2221 20100901.F2S.2 ATCACGC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 2 SRR1023740 F2S.910 Fen 1503 1261 20100901.F3S.2 ATGCAGC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 2 SRR1023740 F3S.910 Fen 1124 869 20100901.F1M.2 ACATGAC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 2 SRR1023740 F1M.910 Fen 2919 2492 20100901.F2M.2 ATCGAGT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 2 SRR1023740 F2M.910 Fen 2808 1786 20100901.F3M.2 CGACTAC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 2 SRR1023740 F3M.910 Fen 1166 980 20100901.F1D.2 AGTGTAC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 2 SRR1023740 F1D.910 Fen 1344 1235 20100901.F2D.2 ATGATAC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 2 SRR1023740 F2D.910 Fen 1956 1632 20100901.P1M.3 AGTATGAGT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 3 SRR1023741 P1M.910 Palsa 3415 2437 20100901.P1D.3 AGTCGTCAT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 3 SRR1023741 P1D.910 Palsa 2774 2119 20100901.B1S.3 AGACGATAC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 3 SRR1023741 B1S.910 Bog 3262 2180 20100901.B2S.3 AGAGAGAGC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 3 SRR1023741 B2S.910 Bog 1746 1271 20100901.B3S.3 AGAGATGAT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 3 SRR1023741 B3S.910 Bog 2441 1867 20100901.B1M.3 AGATCGTAT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 3 SRR1023741 B1M.910 Bog 3101 2355 20100901.B2M.3 AGATGACGT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 3 SRR1023741 B2M.910 Bog 2612 2076 20100901.B3M.3 AGCAGAGAT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 3 SRR1023741 B3M.910 Bog 3159 2360 20100901.B1D.3 AGCAGCAGC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 3 SRR1023741 B1D.910 Bog 2539 2073 20100901.B2D.3 AGCATGTAC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 3 SRR1023741 B2D.910 Bog 2534 2234 20100901.B3D.3 AGCTATCAC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 3 SRR1023741 B3D.910 Bog 2533 1985 20100901.F1D.3 AGTGTCTGC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 3 SRR1023741 F1D.910 Fen 1530 1339 20110615.B1S.4 ACAGC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 4 SRR1023742 B1S.611 Bog 1518 1210 20110615.B2S.4 ACGAC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 4 SRR1023742 B2S.611 Bog 2084 1642 20110712.B2S.4 CTAGT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 4 SRR1023742 B2S.711 Bog 2605 1992 20110712.B3S.4 CTGAC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 4 SRR1023742 B3S.711 Bog 2485 1944 20110615.B1M.4 AGAGT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 4 SRR1023742 B1M.611 Bog 2674 2266 20110615.B2M.4 AGTGC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 4 SRR1023742 B2M.611 Bog 2176 1844 20110615.B3M.4 ATCAT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 4 SRR1023742 B3M.611 Bog 2133 1929 20110615.B1D.4 ATCGC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 4 SRR1023742 B1D.611 Bog 1743 1620 20110615.B2D.4 CACGT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 4 SRR1023742 B2D.611 Bog 10249 9334 20110615.B3D.4 CAGAT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 4 SRR1023742 B3D.611 Bog 2527 2260 20110615.F2S.4 CATGC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 4 SRR1023742 F2S.611 Fen 1512 1054 20110615.F2M.4 CGAGC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 4 SRR1023742 F2M.611 Fen 645 562 20110615.F1D.4 CGCAT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 4 SRR1023742 F1D.611 Fen 2254 1894 20110615.F2D.4 CGTAC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 4 SRR1023742 F2D.611 Fen 2316 2110 20110615.F3D.4 CGTGT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 4 SRR1023742 F3D.611 Fen 4269 3573 20111016.P2S.5 ATGCAGTAT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 P2S.1011 Palsa 6267 4752 20111016.P3S.5 ATGTGCGAT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 P3S.1011 Palsa 2086 1583 20110816.P1S.5 ACGCAGCGC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 P1S.811 Palsa 2677 2079 20110816.P2S.5 ACGCGATGT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 P2S.811 Palsa 2112 1644 20110816.P3S.5 ACGTCTCAT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 P3S.811 Palsa 1220 879 20110712.P2M.5 CACTGTGC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 P2M.711 Palsa 8967 7346 20110712.P3M.5 CAGACTAC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 P3M.711 Palsa 2093 1589 20110816.P3M.5 ACTGAGCAT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 P3M.811 Palsa 1218 912 20110615.P1D.5 AGCAGTAC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 P1D.611 Palsa 1036 869 20111016.P1M.5 ACACAGAGAC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 P1M.1011 Palsa 1714 1403 20111016.P3M.5 ACAGTACTAC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 P3M.1011 Palsa 4249 3362 20111016.P2M.5 ACACTCATGT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 P2M.1011 Palsa 4995 4125 20110712.P1D.5 CAGCTAGC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 P1D.711 Palsa 1735 1554 20110712.P2D.5 CAGTACGT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 P2D.711 Palsa 6306 5525 20110816.P1D.5 ACTGCATAC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 P1D.811 Palsa 2384 1878 20110816.P2D.5 AGACACTGT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 P2D.811 Palsa 4583 3678 20110712.P3D.5 CATAGCAT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 P3D.711 Palsa 2245 1803 20110816.P3D.5 AGACGATAC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 P3D.811 Palsa 4773 4049 20111016.P1D.5 ACATACTCGC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 P1D.1011 Palsa 2022 1668 20111016.P3D.5 ACGAGACAGT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 P3D.1011 Palsa 5581 4458 20111016.P2D.5 ACATCTGAGT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 P2D.1011 Palsa 2324 2018 20111016.B1S.5 ATAGCTAGAT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 B1S.1011 Bog 26551 20448 20111016.B2S.5 ACGCTGTAGC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 B2S.1011 Bog 4731 3473 20111016.B3S.5 ACGTAGCTAT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 B3S.1011 Bog 2212 1643 20110712.B1S.5 CGAGATGT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 B1S.711 Bog 4949 3607 20110816.B1S.5 AGAGAGAGC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 B1S.811 Bog 4352 3361 20110816.B3S.5 AGATCGTAT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 B3S.811 Bog 3168 2465 20111016.B1M.5 ACGTCATGAC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 B1M.1011 Bog 2561 2053 20111016.B3M.5 ACTGCATCGT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 B3M.1011 Bog 2704 2195 20111016.B1D.5 AGACATCAGC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 B1D.1011 Bog 2425 2036 20111016.B2M.5 ACTACGATGC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 B2M.1011 Bog 2061 1788 20110712.B2M.5 CTATGAGT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 B2M.711 Bog 5338 4627 20111016.B3D.5 AGAGAGACGT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 B3D.1011 Bog 2655 2294 20111016.B2D.5 AGACGATGAT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 B2D.1011 Bog 4477 3776 20110712.B1D.5 TAGCTCAT ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 B1D.711 Bog 1711 1444 20110712.B3D.5 TCAGCTAC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 B3D.711 Bog 2310 2035 20110816.B3M.5 AGCAGCAGC ACGGGCGGTGWGTRC CCGYCAATTCMTTTRAGTTT 5 SRR1023743 B3M.811
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