Mutant Drosophila Melanogaster
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Is the Mega-Diverse Genus Ocyptamus (Diptera, Syrphidae) Monophyletic
Molecular Phylogenetics and Evolution 62 (2012) 191–205 Contents lists available at SciVerse ScienceDirect Molecular Phylogenetics and Evolution journal homepage: www.elsevier.com/locate/ympev Is the mega-diverse genus Ocyptamus (Diptera, Syrphidae) monophyletic? Evidence from molecular characters including the secondary structure of 28S rRNA ⇑ Ximo Mengual a,c, , Gunilla Ståhls b, Santos Rojo c a Dept. of Entomology, National Museum of Natural History, Smithsonian Institution, PO Box 37012, MRC-0169, Washington, DC 20013-7012, USA b Zoological Unit, Finnish Museum of Natural History, PO Box 17, FIN-00014 University of Helsinki, Finland c Instituto Universitario CIBIO – Dpto. de Ciencias Ambientales y Recursos Naturales, Universidad de Alicante, Apdo. 99, E-03080 Alicante, Spain article info abstract Article history: Phylogenetic relationships between two New World Syrphinae taxa (Diptera, Syrphidae), i.e. the highly Received 17 March 2011 diverse genus Ocyptamus and the large genus Toxomerus, were analysed based on molecular characters. Revised 17 August 2011 The monophyly of both taxa was tested and the taxonomic status of included subgenera and species Accepted 23 September 2011 groups was examined. Toxomerus constitutes the monogeneric tribe Toxomerini with more than 140 Available online 29 September 2011 described species, while Ocyptamus (tribe Syrphini) is a very diverse genus (over 300 spp.) with multiple recognised subgenera and species groups. Sequence data from three gene regions were used: the mito- Keywords: chondrial protein-coding gene cytochrome c oxidase subunit I (COI) and the nuclear 28S and 18S ribo- Toxomerus somal RNA genes. The secondary structure of two expansion segments (D2, D3) of the ribosomal 28S Ocyptamus Monophyly RNA gene is presented for the family Syrphidae and used for the first time in a multiple sequence align- Syrphidae ment. -
Assessment of Insecticidal Activity of Benzylisoquinoline Alkaloids From
molecules Article Assessment of Insecticidal Activity of Benzylisoquinoline Alkaloids from Chilean Rhamnaceae Plants against Fruit-Fly Drosophila melanogaster and the Lepidopteran Crop Pest Cydia pomonella Soledad Quiroz-Carreño 1, Edgar Pastene-Navarrete 1 , Cesar Espinoza-Pinochet 2, Evelyn Muñoz-Núñez 1, Luis Devotto-Moreno 3, Carlos L. Céspedes-Acuña 1 and Julio Alarcón-Enos 1,* 1 Laboratorio de Síntesis y Biotransformación de Productos Naturales, Dpto. Ciencias Básicas, Universidad del Bio-Bio, PC3780000 Chillán, Chile; [email protected] (S.Q.-C.); [email protected] (E.P.-N.); [email protected] (E.M.-N.); [email protected] (C.L.C.-A.) 2 Dpto. Agroindustria, Facultad de Ingeniería Agrícola, Universidad de Concepción, 3780000 Chillán, Chile; [email protected] 3 Instituto de Investigaciones Agropecuarias, INIA Quilamapu, 3780000 Chillán, Chile; [email protected] * Correspondence: [email protected] Academic Editors: Daniel Granato and Petri Kilpeläinen Received: 29 September 2020; Accepted: 27 October 2020; Published: 3 November 2020 Abstract: The Chilean plants Discaria chacaye, Talguenea quinquenervia (Rhamnaceae), Peumus boldus (Monimiaceae), and Cryptocarya alba (Lauraceae) were evaluated against Codling moth: Cydia pomonella L. (Lepidoptera: Tortricidae) and fruit fly Drosophila melanogaster (Diptera: Drosophilidae), which is one of the most widespread and destructive primary pests of Prunus (plums, cherries, peaches, nectarines, apricots, almonds), pear, walnuts, and chestnuts, among other. Four benzylisoquinoline alkaloids (coclaurine, laurolitsine, boldine, and pukateine) were isolated from the above mentioned plant species and evaluated regarding their insecticidal activity against the codling moth and fruit fly. The results showed that these alkaloids possess acute and chronic insecticidal effects. The most relevant effect was observed at 10 µg/mL against D. -
The Effects of Marking Methodology on Mate Choice in Drosophila Melanogaster
ABC 2020, 7(4):492-504 Animal Behavior and Cognition DOI: https://doi.org/10.26451/abc.07.04.02.2020 ©Attribution 3.0 Unported (CC BY 3.0) PREREGISTERED REPORT The Effects of Marking Methodology on Mate Choice in Drosophila melanogaster Eirlys E. Tysall1, Matilda Q. R. Pembury Smith1*, and R. Tucker Gilman2 1Faculty of Biology, Medicine, and Health, University of Manchester 2Faculty of Science and Engineering; University of Manchester *Corresponding author (Email: [email protected]) Citation – Tysall, E. E., Pembury Smith, M. Q. R., & Gilman, R. T. (2020). The effects of marking methodology on mate choice in Drosophila melanogaster. Animal Behavior and Cognition, 7(4), 492-504. doi: https://doi.org/10.26451/abc.07.04.02.2020 Note: This paper is the final report based on an accepted peer-reviewed preregistered submission that can be found here. Abstract – Mate choice is an important source of sexual selection and a key driver of evolutionary processes including adaptation and speciation. Drosophila species have become an important model system for studying mate choice in the lab. Mate choice experiments often require the marking of individual flies to make those flies identifiable to experimenters, and several marking methods have been developed. All of these methods have the potential to affect mating behavior, but the effects of different marking methods have not been systematically quantified and compared. In this experiment, we quantified and compared the effects of five marking methods commonly used for Drosophila melanogaster: wing clipping, applying paint to the thorax, applying marker pen to the wing, dusting flies with fluorescent powder, and dyeing flies by allowing them to ingest food coloring. -
Hypothesis As an Alternative. the Distribution Of
Heredity (1976), 36 (3), 293-304 REASSOCIATIONPATTERNS AMONG SEGMENTAL INTERCHANGES IN MAIZE D.B. WALDEN and R. C. JANCEY Department of Plant Sciences,Universityof WesternOntario,London, Ontario N6A 3K7 Received2.iv.75 SUMMARY Data from Longley (1961) and Burnham (1969) on the cytological position of the break-points in chrornosomal rearrangements in maize were re-expressed in terms of segment lengths and analysed. After correction for the deviation of the distribution of break-points from an equidistribution, it was shown that highly significant excesses and deficits occurred among some but not all segment length classes. It was concluded that the pattern of reassociation shows: (i) that reassociation involves non-homologues whose interstitial segments are of similar length more frequently than expected; (ii) that the two interchange segments involved in a translocation are of similar length more frequently than expected. 1. INTRODUCTION AN extensive literature exists on the genetic effects and consequences of exposure to radiation and radiomimetic and radiochemical compounds. The origin of chromosomal aberrations had long been considered to be the consequence of" breakage and reunion" until Revell (1955) proposed an "exchange" hypothesis as an alternative. The distribution of the "breakage" or "exchange" events has been approximately determined in several species, with a" random "distribution being claimed by some workers and a "non-random" distribution favoured by several recent investigators (e.g. Caspersson et al., 1972). It is important for the present communication to note that most of the studies record observations made one or a few cell generations after exposure to the mutagen and that only limited information is available about the survival of the aberrations so induced. -
Effects of Gut-Associated Yeasts on Drosophila Melanogaster Performance
Western University Scholarship@Western Electronic Thesis and Dissertation Repository 12-6-2016 12:00 AM Effects of gut-associated yeasts on Drosophila melanogaster performance Yanira Jiménez Padilla The University of Western Ontario Supervisor Brent Sinclair The University of Western Ontario Graduate Program in Biology A thesis submitted in partial fulfillment of the equirr ements for the degree in Master of Science © Yanira Jiménez Padilla 2016 Follow this and additional works at: https://ir.lib.uwo.ca/etd Part of the Biology Commons Recommended Citation Jiménez Padilla, Yanira, "Effects of gut-associated yeasts on Drosophila melanogaster performance" (2016). Electronic Thesis and Dissertation Repository. 4285. https://ir.lib.uwo.ca/etd/4285 This Dissertation/Thesis is brought to you for free and open access by Scholarship@Western. It has been accepted for inclusion in Electronic Thesis and Dissertation Repository by an authorized administrator of Scholarship@Western. For more information, please contact [email protected]. Abstract I used Drosophila melanogaster as a model to study the role of the gut microbiota, specifically yeasts, in animal physiology. I used Saccharomyces cerevisiae, the yeast commonly included in Drosophila diet, and Lachancea kluyveri, isolated from some Drosophila in the wild, and generated axenic (germ-free) and gnotobiotic (yeast-fed) flies. I found that L. kluyveri persists in the crop, as ascospores and vegetative cells, longer than S. cerevisiae. Some L. kluyveri vegetative cells survive passage through the gut. Egg to adult development time is reduced by 14% in vials containing live L. kluyveri or S. cerevisiae, whereas heat-killed yeasts reduced development time by 3.5-4.5%. -
DROSOPHILA MELANOGASTER - the MODEL ORGANISM of CHOICE for the COMPLEX BIOLOGY of MULTI-CELLULAR ORGANISMS Kathleen M
DROSOPHILA MELANOGASTER - THE MODEL ORGANISM OF CHOICE FOR THE COMPLEX BIOLOGY OF MULTI-CELLULAR ORGANISMS Kathleen M. Beckingham 1*, J. Douglas Armstrong2, Michael J. Texada1, Ravi Munjaal1, Dean A. Baker2 1 Department of Biochemistry and Cell Biology, MS-140, Rice University, Houston, Texas 77251. 2 School of Informatics, Institute for Adaptive and Neural Computation Edinburgh, EH1 2QL, UK. ABSTRACT Although the route from mutation to sequenced gene may Drosophila melanogaster has been intensely studied for almost be long and hard, genetics is an extremely powerful 100 years. The sophisticated array of genetic and molecular approach because it can be applied to much more tools that have evolved for analysis of gene function in this complex biological processes than biochemistry. Clearly organism are unique. Further, Drosophila is a complex multi- for fundamental, universal processes that can be studied cellular organism in which many aspects of development and behavior parallel those in human beings. These combined in cell-free extracts, the biochemical approach is highly advantages have permitted research in Drosophila to make effective. But for complex processes, such as seminal contributions to the understanding of fundamental developmental events or behavioral responses, in which biological processes and ensure that Drosophila will continue to many components of the whole organism are in play, provide unique insights in the genomic era. An overview of the genetics offers perhaps the only viable route to dissecting genetic methodologies available in Drosophila is given here, out the protein components. together with examples of outstanding recent contributions of Drosophila to our understanding of cell and organismal biology. The genetic approach has been used to probe gene/protein The growing contribution of Drosophila to our knowledge of function in many organisms. -
Helical Insertion of Peptidoglycan Produces Chiral Ordering of the Bacterial Cell Wall
Helical insertion of peptidoglycan produces PNAS PLUS chiral ordering of the bacterial cell wall Siyuan Wanga,b, Leon Furchtgottc,d, Kerwyn Casey Huangd,1, and Joshua W. Shaevitza,e,1 aLewis-Sigler Institute for Integrative Genomics, Princeton University, Princeton, NJ 08544; bDepartment of Molecular Biology, Princeton University, Princeton, NJ 08544; cBiophysics Program, Harvard University, Cambridge, MA 02138; dDepartment of Bioengineering, Stanford University, Stanford, CA 94305; and eDepartment of Physics, Princeton University, Princeton, NJ 08854 AUTHOR SUMMARY Cells from all kingdoms of wall growth to demonstrate life face the task of that patterning of cell-wall constructing a specific, synthesis by left-handed mechanically robust three- MreB polymers leads to a dimensional (3D) cell shape right-handed chiral from molecular-scale organization of the glycan components. For many strands. This organization bacteria, maintaining a rigid, produces a left-handed rod-like shape facilitates a twisting of the cell body diverse range of behaviors during elongational growth. including swimming motility, We then confirm the detection of chemical existence of right-handed gradients, and nutrient access Fig. P1. Helical insertion of material into the bacterial cell wall (green) glycan organization in E. coli during elongational growth, guided by the protein MreB (yellow), leads and waste evacuation in by osmotically shocking biofilms. The static shape of to an emergent chiral order in the cell-wall network and twisting of the cell that can be visualized using surface-bound beads (red). surface-labeled cells and a bacterial cell is usually directly measuring the defined by the cell wall, a difference in stiffness macromolecular polymer network composed of glycan strands between the longitudinal and transverse directions. -
Interactions Between Drosophila and Its Natural Yeast Symbionts---Is
Interactions between Drosophila and its natural yeast symbionts—Is Saccharomyces cerevisiae a good model for studying the fly-yeast relationship? Don Hoang1,2 , Artyom Kopp1 and James Angus Chandler1,3 1 Department of Evolution and Ecology and Center for Population Biology, University of California, Davis, CA, USA 2 Current aYliation: Program in Genomics of DiVerentiation, NIH/NICHD, Bethesda, MD, USA 3 Current aYliation: Department of Molecular and Cellular Biology, University of California, Berkeley, CA, USA ABSTRACT Yeasts play an important role in the biology of the fruit fly, Drosophila melanogaster. In addition to being a valuable source of nutrition, yeasts aVect D. melanogaster behavior and interact with the host immune system. Most experiments investigating the role of yeasts in D. melanogaster biology use the baker’s yeast, Saccharomyces cerevisiae. However, S. cerevisiae is rarely found with natural populations of D. melanogaster or other Drosophila species. Moreover, the strain of S. cerevisiae used most often in D. melanogaster experiments is a commercially and industrially important strain that, to the best of our knowledge, was not isolated from flies. Since disrupting natural host–microbe interactions can have profound eVects on host biology, the results from D. melanogaster–S. cerevisiae laboratory experiments may not be fully representative of host–microbe interactions in nature. In this study, we explore the D. melanogaster-yeast relationship using five diVerent strains of yeast that were isolated from wild Drosophila populations. Ingested live yeasts have variable persistence in the D. melanogaster gastrointestinal tract. For example, Hanseniaspora occidentalis persists relative to S. cerevisiae, while Submitted 25 April 2015 Brettanomyces naardenensis is removed. -
Genes Controlling Essential Cell-Cycle Functions in Drosophila Melanogaster
Downloaded from genesdev.cshlp.org on October 3, 2021 - Published by Cold Spring Harbor Laboratory Press Genes controlling essential cell-cycle functions in Drosophila melanogaster Maurizio Gatti I and Bruce S. Baker 2 ~Dipartimento de Genetica e Biologia Molecolare, Universit/l di Roma 'La Sapienza', 00185 Roma, Italy; 2Department of Biological Sciences, Stanford University, Stanford, California 94305 USA On the basis of the hypothesis that mutants in genes controlling essential cell cycle functions in Drosophila should survive up to the larval-pupal transition, 59 such 'late lethals' were screened for those mutants affecting cell division. Examination of mitosis in brain neuroblasts revealed that 30 of these lethals cause disruptions in mitotic chromosome behavior. These mutants identify genes whose wild-type functions are important for: (1) progression through different steps of interphase, (2) the maintenance of mitotic chromosome integrity, (3) chromosome condensation, (4) spindle formation and/or function, and (5) completion of cytokinesis or completion of chromosome segregation. The presence of mitotic defects in late lethal mutants is correlated tightly with the presence of defective imaginal discs. Thus, the phenotypes of late lethality and poorly developed imaginal discs are together almost diagnostic of mutations in essential cell-cycle functions. The terminal phenotypes exhibited by these Drosophila mitotic mutants are remarkably similar to those observed in mammalian cell-cycle mutants, suggesting that these diverse organisms use a common genetic logic to regulate and integrate the events of the cell cycle. [Key Words: Cell-cycle mutants; Drosophila; mitosis] Received November 30, 1988; revised version accepted February 7, 1989. The exquisitely precise cyclic changes that eukaryotic review, see Simchen 1978; Ling 1981; Oakley 1981; chromosomes and cells undergo during mitotic and Wissmger and Wang 1983; Marcus et al. -
Drosophila Melanogaster: a Case Study of a Model Genomic Sequence and Its Consequences
Downloaded from genome.cshlp.org on September 24, 2021 - Published by Cold Spring Harbor Laboratory Press Perspective Drosophila melanogaster: A case study of a model genomic sequence and its consequences Michael Ashburner2 and Casey M. Bergman1 Department of Genetics, University of Cambridge, Cambridge, CB2 3EH, United Kingdom The sequencing and annotation of the Drosophila melanogaster genome, first published in 2000 through collaboration between Celera Genomics and the Drosophila Genome Projects, has provided a number of important contributions to genome research. By demonstrating the utility of methods such as whole-genome shotgun sequencing and genome annotation by a community “jamboree,” the Drosophila genome established the precedents for the current paradigm used by most genome projects. Subsequent releases of the initial genome sequence have been improved by the Berkeley Drosophila Genome Project and annotated by FlyBase, the Drosophila community database, providing one of the highest-quality genome sequences and annotations for any organism. We discuss the impact of the growing number of genome sequences now available in the genus on current Drosophila research, and some of the biological questions that these resources will enable to be solved in the future. It is almost 100 years since William Castle introduced Drosophila way of sequencing a minimal tiling path of clones (cosmids, P1 melanogaster to the pleasures and rigors of biological research clones, and BACs) chosen from physical maps of the genome (Castle 1906). Four major phases of Drosophila research can, per- (Hartl et al. 1992; Madueno et al. 1995; Kimmerly et al. 1996; haps, be distinguished. The period ∼1910–1940, of classical ge- Hoskins et al. -
Hoverflies Family: Syrphidae
Birmingham & Black Country SPECIES ATLAS SERIES Hoverflies Family: Syrphidae Andy Slater Produced by EcoRecord Introduction Hoverflies are members of the Syrphidae family in the very large insect order Diptera ('true flies'). There are around 283 species of hoverfly found in the British Isles, and 176 of these have been recorded in Birmingham and the Black Country. This atlas contains tetrad maps of all of the species recorded in our area based on records held on the EcoRecord database. The records cover the period up to the end of 2019. Myathropa florea Cover image: Chrysotoxum festivum All illustrations and photos by Andy Slater All maps contain Contains Ordnance Survey data © Crown Copyright and database right 2020 Hoverflies Hoverflies are amongst the most colourful and charismatic insects that you might spot in your garden. They truly can be considered the gardener’s fiend as not only are they important pollinators but the larva of many species also help to control aphids! Great places to spot hoverflies are in flowery meadows on flowers such as knapweed, buttercup, hogweed or yarrow or in gardens on plants such as Canadian goldenrod, hebe or buddleia. Quite a few species are instantly recognisable while the appearance of some other species might make you doubt that it is even a hoverfly… Mimicry Many hoverfly species are excellent mimics of bees and wasps, imitating not only their colouring, but also often their shape and behaviour. Sometimes they do this to fool the bees and wasps so they can enter their nests to lay their eggs. Most species however are probably trying to fool potential predators into thinking that they are a hazardous species with a sting or foul taste, even though they are in fact harmless and perfectly edible. -
Hoverfly (Diptera: Syrphidae) Richness and Abundance Vary with Forest Stand Heterogeneity: Preliminary Evidence from a Montane Beech Fir Forest
Eur. J. Entomol. 112(4): 755–769, 2015 doi: 10.14411/eje.2015.083 ISSN 1210-5759 (print), 1802-8829 (online) Hoverfly (Diptera: Syrphidae) richness and abundance vary with forest stand heterogeneity: Preliminary evidence from a montane beech fir forest LAURENT LARRIEU 1, 2, ALAIN CABANETTES 1 and JEAN-PIERRE SARTHOU 3, 4 1 INRA, UMR1201 DYNAFOR, Chemin de Borde Rouge, Auzeville Tolosane, CS 52627, F-31326 Castanet Tolosan Cedex, France; e-mails: [email protected]; [email protected] ² CNPF/ IDF, Antenne de Toulouse, 7 chemin de la Lacade, F-31320 Auzeville Tolosane, France 3 INRA, UMR 1248 AGIR, Chemin de Borde Rouge, Auzeville Tolosane, CS 52627, F-31326 Castanet Tolosan Cedex, France; e-mail: [email protected] 4 University of Toulouse, INP-ENSAT, Avenue de l’Agrobiopôle, F-31326 Castanet Tolosan, France Key words. Diptera, Syrphidae, Abies alba, deadwood, Fagus silvatica, functional diversity, tree-microhabitats, stand heterogeneity Abstract. Hoverflies (Diptera: Syrphidae) provide crucial ecological services and are increasingly used as bioindicators in environ- mental assessment studies. Information is available for a wide range of life history traits at the species level for most Syrphidae but little is recorded about the environmental requirements of forest hoverflies at the stand scale. The aim of this study was to explore whether the structural heterogeneity of a stand influences species richness or abundance of hoverflies in a montane beech-fir forest. We used the catches of Malaise traps set in 2004 and 2007 in three stands in the French Pyrenees, selected to represent a wide range of structural heterogeneity in terms of their vertical structure, tree diversity, deadwood and tree-microhabitats.