Both Full-Length and Protease-Cleaved Products of Osteopontin Are Elevated in Infectious Diseases

Total Page:16

File Type:pdf, Size:1020Kb

Both Full-Length and Protease-Cleaved Products of Osteopontin Are Elevated in Infectious Diseases biomedicines Review Both Full-Length and Protease-Cleaved Products of Osteopontin Are Elevated in Infectious Diseases Toshio Hattori 1,* , Hiroko Iwasaki-Hozumi 1 , Gaowa Bai 1 , Haorile Chagan-Yasutan 1,2, Ashwnini Shete 3 , Elizabeth Freda Telan 4, Atsushi Takahashi 1, Yugo Ashino 5 and Takashi Matsuba 6 1 Research Institute of Health and Welfare, Kibi International University, Takahashi 716-8508, Japan; [email protected] (H.I.-H.); [email protected] (G.B.); [email protected] (H.C.-Y.); [email protected] (A.T.) 2 Mongolian Psychosomatic Medicine Department, International Mongolian Medicine Hospital of Inner Mongolia, Hohhot 010065, China 3 ICMR-National AIDS Research Institute, 73 G-Block, MIDC, Bhosari, Pune 411026, India; [email protected] 4 STD AIDS Cooperative Central Laboratory, San Lazaro Hospital, Manila 1003, Philippines; [email protected] 5 Department of Respiratory Medicine, Sendai City Hospital, Sendai 982-8502, Japan; [email protected] 6 Department of Animal Pharmaceutical Science, School of Pharmaceutical Science, Kyusyu University of Health and Welfare, Nobeoka 882-8508, Japan; [email protected] * Correspondence: [email protected]; Tel./Fax: +81-866-22-9469 Citation: Hattori, T.; Abstract: Circulating full-length osteopontin (FL-OPN) is elevated in plasma from patients with Iwasaki-Hozumi, H.; Bai, G.; various infectious diseases, such as adult T-cell leukemia, Mycobacterium tuberculosis (TB), hepatitis Chagan-Yasutan, H.; Shete, A.; Telan, virus infection, leptospirosis, acquired immune deficiency syndrome (AIDS), AIDS/TB, and coron- E.F.; Takahashi, A.; Ashino, Y.; avirus disease 2019 (COVID-19). Proteolysis of OPN by thrombin, matrix metalloproteases, caspase Matsuba, T. Both Full-Length and 8/3, cathepsin D, plasmin, and enterokinase generates various cleaved OPNs with a variety of Protease-Cleaved Products of bioactivities by binding to different target cells. Moreover, OPN is susceptible to gradual proteolysis. Osteopontin Are Elevated in During inflammation, one of the cleaved fragments, N-terminal thrombin-cleaved OPN (trOPN or Infectious Diseases. Biomedicines 2021, 168 9, 1006. https://doi.org/ OPN-Arg [OPN-R]), induces dendritic cell (DC) adhesion. Further cleavage by carboxypeptidase 168 167 10.3390/biomedicines9081006 B2 or carboxypeptidase N removes Arg from OPN-R to OPN-Leu (OPN-L). Consequently, OPN-L decreases DC adhesion. In particular, the differences in plasma level over time are observed Academic Editor: between FL-OPN and its cleaved OPNs during inflammation. We found that the undefined OPN Giuseppe Cappellano levels (mixture of FL-OPN and cleaved OPN) were elevated in plasma and reflected the pathology of TB and COVID-19 rather than FL-OPN. These infections are associated with elevated levels of Received: 2 July 2021 various proteases. Inhibition of the cleavage or the activities of cleaved products may improve the Accepted: 9 August 2021 outcome of the therapy. Research on the metabolism of OPN is expected to create new therapies Published: 13 August 2021 against infectious diseases. Publisher’s Note: MDPI stays neutral Keywords: osteopontin; infectious disease; tuberculosis; adult T-cell leukemia; human immunodefi- with regard to jurisdictional claims in ciency virus; dengue virus; hepatitis C virus; leptospirosis; proteases; matrix metalloproteinase published maps and institutional affil- iations. 1. Introduction Osteopontin (OPN) is a phosphoprotein and is secreted by transformed cell lines from Copyright: © 2021 by the authors. several mammalian species in the 58,000-Da molecular-weight range [1]. Subsequently, Licensee MDPI, Basel, Switzerland. This article is an open access article OPN was shown to be secreted by activated macrophages and T-lymphocytes abundantly. distributed under the terms and Furthermore, a cleaved 45 kDa product and a 70 kDa species secreted from T cells were conditions of the Creative Commons identified [2]. It was also found that OPN belongs to matricellular proteins characterized Attribution (CC BY) license (https:// by the direct binding to other matrix proteins, triggering of their specific surface receptors, creativecommons.org/licenses/by/ and binding to proteases, growth factors, and cytokines (which modulates their activities). 4.0/). OPN also modulates several processes, like cell adhesion and migration, extracellular Biomedicines 2021, 9, 1006. https://doi.org/10.3390/biomedicines9081006 https://www.mdpi.com/journal/biomedicines Biomedicines 2021, 9, x FOR PEER REVIEW 2 of 27 surface receptors, and binding to proteases, growth factors, and cytokines (which modu- lates their activities). OPN also modulates several processes, like cell adhesion and migra- tion, extracellular matrix (ECM) deposition, cell survival, and proliferation [3,4]. Detection of various forms of OPN influencing these functions was sought by an enzyme-linked immunosorbent assay (ELISA) system using antibodies against synthetic peptides [5]. OPN is known to be cleaved by various proteases, and, among them, thrombin cleavage maybe important, because they localize together in various inflammations (Figure 1) [6,7]. The cleaved fragments maintain OPN adhesive function and expose new active domains Biomedicines 2021, 9, 1006 that may impart new activities. Thrombin cleavage leads to exposure of the SVVYGLR2 of 28 cryptic domain that induces cell adhesion and migration by binding to integrins α4 and α9 in vitro [8]. Using the combination of antibodies, namely, O-17 specific to the N-termi- 17 31 matrixnus of (ECM)OPN (Ile deposition,–Gln ) and cell 34E3 survival, specific and to proliferation N-terminal [ 3thrombin-cleaved,4]. Detection of various OPN (trOPN) forms 162 168 ofepitope OPN influencing(Ser –Arg these), exposed functions by thrombin was sought digestion, by an it enzyme-linked was possible to immunosorbent measure trOPN assay[9]. Thereafter, (ELISA) system plasma using full-length antibodies OPN against(FL-OPN) synthetic and trOPN peptides levels [5 were]. OPN measured is known using to bea commercial cleaved by variousELISA kit proteases, (Immuno-Biological and, among Laboratories, them, thrombin Gunma, cleavage Japan) maybe and important,another kit because(R&D Systems, they localize Minneapolis, together MN, in various USA) that inflammations detect both FL-OPN (Figure1 )[and6 ,the7]. cleaved The cleaved prod- fragmentsucts, though maintain their epitopes OPN adhesive were unde functionfined (Ud-OPN) and expose (Figure new active1) [10,11]. domains that may impartThese new studies activities. enabled Thrombin the development cleavage leads of new to exposure treatment of based the SVVYGLR on metabolism cryptic of domainOPN. It thatwas inducesproposed cell that adhesion antibody and agains migrationt thrombin by binding cryptic toepitope integrins of OPNα4 andinhibitsα9 inmetastasis vitro [8]. Usingas well the as combinationtumor growth of antibodies,in a mouse namely,model of O-17 adult specific T-cell toleukemia the N-terminus (ATL) [12] of OPNand (Ileattenuates17–Gln31 liver) and inflammation 34E3 specific toin N-terminal a non-alcoholic thrombin-cleaved steatohepatitis OPN mouse (trOPN) model epitope [13]. (SerFurthermore,162–Arg168 ),new exposed derivatives by thrombin of brefelam digestion,ide, aromatic it was amide possible isolated to measure from the trOPN Dictyoste- [9]. Thereafter,lium cellular plasma slime full-lengthmodel, were OPN reported (FL-OPN) to inhibit andtrOPN OPN synthesis levels were in THP-1 measured cells using [14]. aIn commercialthis review, ELISA we mention kit (Immuno-Biological the biological activities Laboratories, of FL-OPN Gunma, and its Japan) cleaved and products another and kit (R&Dthe summary Systems, of Minneapolis, clinical studies MN, USA)measuring that detect them bothand FL-OPNimplicated and novel the cleaved roles of products, OPN in thoughinfectious their diseases. epitopes were undefined (Ud-OPN) (Figure1)[10,11]. FigureFigure 1. 1.ELISA ELISA system system employed employed to to measure measure osteopontin osteopontin (OPN). (OPN). (A ().A Amino). Amino acid acid sequence sequence of theof the epitope epitope of theof the antibodies antibod- usedies used for the for assay.the assay. (B). Antibodies(B). Antibodies used used for the for ELISAthe ELISA kits. kits. Abbreviations Abbreviations are FL-OPN,are FL-OPN, full-length full-leng OPN;th OPN; trOPN, trOPN, thrombin- throm- cleavedbin-cleaved OPN; OPN; and Ud-OPN, and Ud-OPN, undefined undefined OPN. OPN. 2. OPNThese Proteolysis studies enabled and Bioa thectivities development of Cleaved of new OPNs treatment based on metabolism of OPN. It wasOPN proposed undergoes that antibody numerous against posttranslational thrombin cryptic modifications, epitope of OPNsuch inhibitsas serine/threonine metastasis asphosphorylation, well as tumor growth sulfation, in a mouse glycosylation, model of adult glutamination, T-cell leukemia and (ATL) proteolytic [12] and processing, attenuates liverwhich inflammation significantly in contribute a non-alcoholic to the steatohepatitis functions of OPN. mouse Proteolytic model [13 ].processing Furthermore, either new in- derivativescreases or reduces of brefelamide, the ability aromatic of OPN amide to bind isolated to target from receptors. the Dictyostelium Thus, smallcellular differences slime model,in the cleavage were reported pattern to result inhibit in OPN a substantia synthesisl effect in THP-1 on the cells functions [14]. In of this OPN. review, To date, we mentionthrombin the [15–17], biological matrix
Recommended publications
  • Common Gene Polymorphisms Associated with Thrombophilia
    Chapter 5 Common Gene Polymorphisms Associated with Thrombophilia Christos Yapijakis, Zoe Serefoglou and Constantinos Voumvourakis Additional information is available at the end of the chapter http://dx.doi.org/10.5772/61859 Abstract Genetic association studies have revealed a correlation between DNA variations in genes encoding factors of the hemostatic system and thrombosis-related disease. Certain var‐ iant alleles of these genes that affect either gene expression or function of encoded protein are known to be genetic risk factors for thrombophilia. The chapter presents the current genetics and molecular biology knowledge of the most important DNA polymorphisms in thrombosis-related genes encoding coagulation factor V (FV), coagulation factor II (FII), coagulation factor XII (FXII), coagulation factor XIII A1 subunit (FXIIIA1), 5,10- methylene tetrahydrofolate reductase (MTHFR), serpine1 (SERPINE1), angiotensin I-con‐ verting enzyme (ACE), angiotensinogen (AGT), integrin A2 (ITGA2), plasma carboxypeptidase B2 (CPB2), platelet glycoprotein Ib α polypeptide (GP1BA), thrombo‐ modulin (THBD) and protein Z (PROZ). The molecular detection methods of each DNA polymorphism is presented, in addition to the current knowledge regarding its influence on thrombophilia and related thrombotic events, including stroke, myocardial infarction, deep vein thrombosis, spontaneous abortion, etc. In addition, best thrombosis prevention strategies with a combination of genetic counseling and molecular testing are discussed. Keywords: Thrombophilia, coagulation
    [Show full text]
  • Supplementary Table 1: Adhesion Genes Data Set
    Supplementary Table 1: Adhesion genes data set PROBE Entrez Gene ID Celera Gene ID Gene_Symbol Gene_Name 160832 1 hCG201364.3 A1BG alpha-1-B glycoprotein 223658 1 hCG201364.3 A1BG alpha-1-B glycoprotein 212988 102 hCG40040.3 ADAM10 ADAM metallopeptidase domain 10 133411 4185 hCG28232.2 ADAM11 ADAM metallopeptidase domain 11 110695 8038 hCG40937.4 ADAM12 ADAM metallopeptidase domain 12 (meltrin alpha) 195222 8038 hCG40937.4 ADAM12 ADAM metallopeptidase domain 12 (meltrin alpha) 165344 8751 hCG20021.3 ADAM15 ADAM metallopeptidase domain 15 (metargidin) 189065 6868 null ADAM17 ADAM metallopeptidase domain 17 (tumor necrosis factor, alpha, converting enzyme) 108119 8728 hCG15398.4 ADAM19 ADAM metallopeptidase domain 19 (meltrin beta) 117763 8748 hCG20675.3 ADAM20 ADAM metallopeptidase domain 20 126448 8747 hCG1785634.2 ADAM21 ADAM metallopeptidase domain 21 208981 8747 hCG1785634.2|hCG2042897 ADAM21 ADAM metallopeptidase domain 21 180903 53616 hCG17212.4 ADAM22 ADAM metallopeptidase domain 22 177272 8745 hCG1811623.1 ADAM23 ADAM metallopeptidase domain 23 102384 10863 hCG1818505.1 ADAM28 ADAM metallopeptidase domain 28 119968 11086 hCG1786734.2 ADAM29 ADAM metallopeptidase domain 29 205542 11085 hCG1997196.1 ADAM30 ADAM metallopeptidase domain 30 148417 80332 hCG39255.4 ADAM33 ADAM metallopeptidase domain 33 140492 8756 hCG1789002.2 ADAM7 ADAM metallopeptidase domain 7 122603 101 hCG1816947.1 ADAM8 ADAM metallopeptidase domain 8 183965 8754 hCG1996391 ADAM9 ADAM metallopeptidase domain 9 (meltrin gamma) 129974 27299 hCG15447.3 ADAMDEC1 ADAM-like,
    [Show full text]
  • A Differential Protein Solubility Approach for the Depletion of Highly Abundant Proteins in Plasma Using Ammonium Sulfate Ravi Chand Bollineni1, 2*, Ingrid J
    Electronic Supplementary Material (ESI) for Analyst. This journal is © The Royal Society of Chemistry 2015 A differential protein solubility approach for the depletion of highly abundant proteins in plasma using ammonium sulfate Ravi Chand Bollineni1, 2*, Ingrid J. Guldvik3, Henrik Gronberg4, Fredrik Wiklund4, Ian G. Mills3, 5, 6 and Bernd Thiede1, 2 1Department of Biosciences, University of Oslo, Oslo, Norway 2Biotechnology Centre of Oslo, University of Oslo, Oslo, Norway 3Centre for Molecular Medicine Norway (NCMM), University of Oslo and Oslo University Hospitals, Norway 4Department of Medical Epidemiology and Biostatistics, Karolinska Institute, Stockholm, Sweden 5Department of Cancer Prevention, Oslo University Hospitals, Oslo, Norway 6Department of Urology, Oslo University Hospitals, Oslo, Norway Keywords: ammonium sulfate, blood, depletion, plasma, protein precipitation *To whom the correspondence should be addressed: Ravi Chand Bollineni, Department of Biosciences, University of Oslo, P.O. Box 1066 Blindern, 0316 Oslo, Norway, Tel.: +47-22840512; Fax +47-22840501; E-mail: [email protected] Supplementary information Figure S1: SDS-PAGE analysis of serum proteins precipitated with the ethanol/sodium acetate (A), TCA/acetone (B) and ammonium sulfate precipitation (C). A) Ethanol/sodium acetate precipitation: (1) pellet obtained after 42% ethanol precipitation and (2) pellet obtained after precipitation of proteins in the supernatant with 0.8M sodium acetate (pH5.7) and (3) proteins left over in the supernatant. B) Serum proteins are precipitated with 10% TCA/acetone (1) and (2) proteins left over in the supernatant. C) Serum proteins are precipitated with increasing ammonium sulfate concentrations 15% (1), 25% (2), 35% (3), 40% (4), 45% (5), 50% (6) and total serum (7).
    [Show full text]
  • Supplementary Table S4. FGA Co-Expressed Gene List in LUAD
    Supplementary Table S4. FGA co-expressed gene list in LUAD tumors Symbol R Locus Description FGG 0.919 4q28 fibrinogen gamma chain FGL1 0.635 8p22 fibrinogen-like 1 SLC7A2 0.536 8p22 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 DUSP4 0.521 8p12-p11 dual specificity phosphatase 4 HAL 0.51 12q22-q24.1histidine ammonia-lyase PDE4D 0.499 5q12 phosphodiesterase 4D, cAMP-specific FURIN 0.497 15q26.1 furin (paired basic amino acid cleaving enzyme) CPS1 0.49 2q35 carbamoyl-phosphate synthase 1, mitochondrial TESC 0.478 12q24.22 tescalcin INHA 0.465 2q35 inhibin, alpha S100P 0.461 4p16 S100 calcium binding protein P VPS37A 0.447 8p22 vacuolar protein sorting 37 homolog A (S. cerevisiae) SLC16A14 0.447 2q36.3 solute carrier family 16, member 14 PPARGC1A 0.443 4p15.1 peroxisome proliferator-activated receptor gamma, coactivator 1 alpha SIK1 0.435 21q22.3 salt-inducible kinase 1 IRS2 0.434 13q34 insulin receptor substrate 2 RND1 0.433 12q12 Rho family GTPase 1 HGD 0.433 3q13.33 homogentisate 1,2-dioxygenase PTP4A1 0.432 6q12 protein tyrosine phosphatase type IVA, member 1 C8orf4 0.428 8p11.2 chromosome 8 open reading frame 4 DDC 0.427 7p12.2 dopa decarboxylase (aromatic L-amino acid decarboxylase) TACC2 0.427 10q26 transforming, acidic coiled-coil containing protein 2 MUC13 0.422 3q21.2 mucin 13, cell surface associated C5 0.412 9q33-q34 complement component 5 NR4A2 0.412 2q22-q23 nuclear receptor subfamily 4, group A, member 2 EYS 0.411 6q12 eyes shut homolog (Drosophila) GPX2 0.406 14q24.1 glutathione peroxidase
    [Show full text]
  • Activation of NF-Κb Signaling Promotes Prostate Cancer Progression in the Mouse and Predicts Poor Progression and Death in Pati
    SUPPLEMENTARY DATA: Supplementary Figure 1. NF-B signaling is continuously activated in the prostate of - mouse. In order to determine the NF- '- mouse, we crossed the '- mice with NGL, a NF-B reporter mouse. NGL transgenic mice are engineered to express a GFP/luciferase fusion protein under the control of a promoter containing multiple NF-B consensus binding sites (1). Since the NF-'- NGL mouse is activated in the whole body, the relatively high level of background activation does not allow detection of NF- prostate. Therefore, in order to determine the NF-the '- mouse, we grafted the prostates from 'o the kidney capsule of male nude mice using a tissue rescue technique. NF-B activity was measured at 7 weeks after grafting. The bioluminescence imaging shows NF-B signaling is activated (green) in the kidney, where the grafted prostate from ' use resides (B). In panel (A), the control mouse (grafted with the prostate from NGL mouse) has no bioluminescence, illustrating that in the absence of '-, there is not activation of NF- B. The circles indicate kidney areas. 1 Supplementary Figure 2. NF-B signaling activated in the prostate of Myc/IB bigenic mouse. The prostates from Myc alone (Myc) and bigenic (Myc/IB) mice were harvested at 6 months of age. Activation of NF-B signaling in the prostate was determined by IHC staining of p65-pho antibody. 2 Supplementary Figure 3. Continuous activation of NF-B signaling promotes PCa progression in the Hi-Myc transgenic mouse. The prostates from Myc alone (Myc) and bigeneic (Myc/IB) mice were harvested at 6 months of age.
    [Show full text]
  • Anti-ITGA9 Monoclonal Antibody, Clone FQS0833 (DCABH-3776) This Product Is for Research Use Only and Is Not Intended for Diagnostic Use
    Anti-ITGA9 monoclonal antibody, clone FQS0833 (DCABH-3776) This product is for research use only and is not intended for diagnostic use. PRODUCT INFORMATION Product Overview Rabbit monoclonal to Integrin alpha 9 Antigen Description Integrin alpha-9/beta-1 is a receptor for VCAM1, cytotactin and osteopontin. It recognizes the sequence A-E-I-D-G-I-E-L in cytotactin. Immunogen Synthetic peptide (the amino acid sequence is considered to be commercially sensitive) Isotype IgG Source/Host Rabbit Species Reactivity Mouse, Rat, Human Clone FQS0833 Purity Tissue culture supernatant Conjugate Unconjugated Applications WB, IHC-P Positive Control NIH3T3, A673, HepG2, and A549 cell lysates, Human lung and Human skin tissues Format Liquid Size 100 μl Buffer Preservative: 0.01% Sodium azide; Constituents: 50% Glycerol, 0.05% BSA Preservative 0.01% Sodium Azide Storage store at -20°C. Avoid freeze / thaw cycles. Ship Shipped at 4°C. GENE INFORMATION Gene Name ITGA9 integrin, alpha 9 [ Homo sapiens ] Official Symbol ITGA9 45-1 Ramsey Road, Shirley, NY 11967, USA Email: [email protected] Tel: 1-631-624-4882 Fax: 1-631-938-8221 1 © Creative Diagnostics All Rights Reserved Synonyms ITGA9; integrin, alpha 9; integrin alpha-9; ALPHA RLC; integrin; alpha 4 like; ITGA4L; RLC; integrin alpha-RLC; ALPHA-RLC; Entrez Gene ID 3680 Protein Refseq NP_002198 UniProt ID Q13797 Chromosome Location 3p21.3 Pathway Arrhythmogenic right ventricular cardiomyopathy (ARVC), organism-specific biosystem; Arrhythmogenic right ventricular cardiomyopathy (ARVC), conserved biosystem; Axon guidance, organism-specific biosystem; Cell adhesion molecules (CAMs), organism-specific biosystem; Cell adhesion molecules (CAMs), conserved biosystem; Developmental Biology, organism- specific biosystem; Dilated cardiomyopathy, organism-specific biosystem.
    [Show full text]
  • Table 3: Average Gene Expression Profiles by Chromosome
    Supplemental Data Table 1: Experimental Setup Correlation Array Reverse Fluor Array Extraction Coefficient Print Batch (Y/N) mean (range) DLD1-I.1 I A N DLD1-I.2 I B N 0.86 DLD1-I.3 I C N (0.79-0.90) DLD1-I.4 I C Y DLD1 DLD1-II.1 II D N DLD1-II.2 II E N 0.86 DLD1-II.3 II F N (0.74-0.94) DLD1-II.4 II F Y DLD1+3-II.1 II A N DLD1+3-II.2 II A N 0.85 DLD1 + 3 DLD1+3-II.3 II B N (0.64-0.95) DLD1+3-II.4 II B Y DLD1+7-I.1 I A N DLD1+7-I.2 I A N 0.79 DLD1 + 7 DLD1+7-I.3 I B N (0.68-0.90) DLD1+7-I.4 I B Y DLD1+13-I.1 I A N DLD1+13-I.2 I A N 0.88 DLD1 + 13 DLD1+13-I.3 I B N (0.84-0.91) DLD1+13-I.4 I B Y hTERT-HME-I.1 I A N hTERT-HME-I.2 I B N 0.85 hTERT-HME hTERT-HME-I.3 I C N (0.80-0.92) hTERT-HME-I.4 I C Y hTERT-HME+3-I.1 I A N hTERT-HME+3-I.2 I B N 0.84 hTERT-HME + 3 hTERT-HME+3-I.3 I C N (0.74-0.90) hTERT-HME+3-I.4 I C Y Supplemental Data Table 2: Average gene expression profiles by chromosome arm DLD1 hTERT-HME Ratio.7 Ratio.1 Ratio.3 Ratio.3 Chrom.
    [Show full text]
  • Carboxypeptidase B2 (CPB2) Human Shrna Lentiviral Particle (Locus ID 1361) Product Data
    OriGene Technologies, Inc. 9620 Medical Center Drive, Ste 200 Rockville, MD 20850, US Phone: +1-888-267-4436 [email protected] EU: [email protected] CN: [email protected] Product datasheet for TL305252V Carboxypeptidase B2 (CPB2) Human shRNA Lentiviral Particle (Locus ID 1361) Product data: Product Type: shRNA Lentiviral Particles Product Name: Carboxypeptidase B2 (CPB2) Human shRNA Lentiviral Particle (Locus ID 1361) Locus ID: 1361 Synonyms: CPU; PCPB; TAFI Vector: pGFP-C-shLenti (TR30023) Format: Lentiviral particles RefSeq: NM_001278541, NM_001872, NM_016413, NM_001872.1, NM_001872.2, NM_001872.3, NM_001872.4, NM_016413.1, NM_016413.2, NM_016413.3, NM_001278541.1, BC007057, BC007057.1, NM_001872.5 Summary: Carboxypeptidases are enzymes that hydrolyze C-terminal peptide bonds. The carboxypeptidase family includes metallo-, serine, and cysteine carboxypeptidases. According to their substrate specificity, these enzymes are referred to as carboxypeptidase A (cleaving aliphatic residues) or carboxypeptidase B (cleaving basic amino residues). The protein encoded by this gene is activated by trypsin and acts on carboxypeptidase B substrates. After thrombin activation, the mature protein downregulates fibrinolysis. Polymorphisms have been described for this gene and its promoter region. Alternate splicing results in multiple transcript variants. [provided by RefSeq, Jun 2013] shRNA Design: These shRNA constructs were designed against multiple splice variants at this gene locus. To be certain that your variant of interest is targeted,
    [Show full text]
  • Integrin Alpha 9 Antibody Product Data Sheet Tested Species Reactivity Details Human (Hu) Catalog Number: PA5-27771
    Lot Number: QE2031191G Integrin alpha 9 Antibody Product Data Sheet Tested Species Reactivity Details Human (Hu) Catalog Number: PA5-27771 Size: 100 µL Tested Applications Dilution * Class: Polyclonal Western Blot (WB) 1:500-1:3000 Type: Antibody Immunohistochemistry (Paraffin) 1:100-1:1000 Clone: (IHC (P)) Host / Isotype: Rabbit / IgG * Suggested working dilutions are given as a guide only. It is recommended that the user titrates the product for use in their own experiment using appropriate negative and positive controls. Recombinant fragment corresponding to a region within Immunogen: amino acids 1 and 255 of Human Integrin alpha 9 Form Information Form: Liquid Concentration: 1mg/ml Purification: Antigen affinity chromatography PBS, pH 7, with 1% BSA, 20% Storage Buffer: glycerol Preservative: 0.01% thimerosal Storage Conditions: -20° C, Avoid Freeze/Thaw Cycles Product Specific Information General Information PA5-27771 targets Integrin alpha 9 in IHC (P) and WB applications and This gene encodes an alpha integrin. Integrins are heterodimeric integral shows reactivity with Human samples. membrane glycoproteins composed of an alpha chain and a beta chain that mediate cell-cell and cell-matrix adhesion. The protein encoded by this gene, The PA5-27771 immunogen is recombinant fragment corresponding to a when bound to the beta 1 chain, forms an integrin that is a receptor for region within amino acids 1 and 255 of Human Integrin alpha 9. VCAM1, cytotactin and osteopontin. Expression of this gene has been found For Research Use Only. Not for use in diagnostic procedures. Not for to be upregulated in small cell lung cancers. resale without express authorization.
    [Show full text]
  • Electronic Supplementary Material (ESI) for Analyst. This Journal Is © the Royal Society of Chemistry 2020
    Electronic Supplementary Material (ESI) for Analyst. This journal is © The Royal Society of Chemistry 2020 Table S1.
    [Show full text]
  • Anti-ITGB1 Monoclonal Antibody, Clone 4C7 (DCABH-1896) This Product Is for Research Use Only and Is Not Intended for Diagnostic Use
    Anti-ITGB1 monoclonal antibody, clone 4C7 (DCABH-1896) This product is for research use only and is not intended for diagnostic use. PRODUCT INFORMATION Product Overview Mouse monoclonal to Integrin beta 1 Antigen Description Integrins alpha-1/beta-1, alpha-2/beta-1, alpha-10/beta-1 and alpha-11/beta-1 are receptors for collagen. Integrins alpha-1/beta-1 and alpha-2/beta-2 recognize the proline-hydroxylated sequence G-F-P-G-E-R in collagen. Integrins alpha-2/beta-1, alpha-3/beta-1, alpha-4/beta-1, alpha-5/beta-1, alpha-8/beta-1, alpha-10/beta-1, alpha-11/beta-1 and alpha-V/beta-1 are receptors for fibronectin. Alpha-4/beta-1 recognizes one or more domains within the alternatively spliced CS-1 and CS-5 regions of fibronectin. Integrin alpha-5/beta-1 is a receptor for fibrinogen. Integrin alpha-1/beta-1, alpha-2/beta-1, alpha-6/beta-1 and alpha-7/beta-1 are receptors for lamimin. Integrin alpha-4/beta-1 is a receptor for VCAM1. It recognizes the sequence Q-I-D-S in VCAM1. Integrin alpha-9/beta-1 is a receptor for VCAM1, cytotactin and osteopontin. It recognizes the sequence A-E-I-D-G-I-E-L in cytotactin. Integrin alpha-3/beta-1 is a receptor for epiligrin, thrombospondin and CSPG4. Alpha-3/beta-1 may mediate with LGALS3 the stimulation by CSPG4 of endothelial cells migration. Integrin alpha-V/beta-1 is a receptor for vitronectin. Beta-1 integrins recognize the sequence R-G-D in a wide array of ligands.
    [Show full text]
  • Genetic Factors for Obesity
    843-851 5/10/06 13:36 Page 843 INTERNATIONAL JOURNAL OF MOLECULAR MEDICINE 18: 843-851, 2006 843 Genetic factors for obesity YOSHIJI YAMADA1,2, KIMIHIKO KATO3, TAKASHI KAMEYAMA4, KIYOSHI YOKOI3, HITOSHI MATSUO5, TOMONORI SEGAWA5, SACHIRO WATANABE5, SAHOKO ICHIHARA1, HIDEMI YOSHIDA6, KEI SATOH6 and YOSHINORI NOZAWA2 1Department of Human Functional Genomics, Life Science Research Center, Mie University, Tsu; 2Gifu International Institute of Biotechnology, Kakamigahara; Departments of 3Cardiovascular Medicine and 4Neurology, Gifu Prefectural Tajimi Hospital, Tajimi; 5Department of Cardiology, Gifu Prefectural Gifu Hospital, Gifu; 6Department of Vascular Biology, Institute of Brain Science, Hirosaki University School of Medicine, Hirosaki, Japan Received May 29, 2006; Accepted July 20, 2006 Abstract. The purpose of the present study was to identify Introduction gene polymorphisms for the reliable assessment of genetic factors for obesity. The study population comprised 3906 The prevalence of obesity, a multifactorial disease caused by unrelated Japanese individuals (2286 men, 1620 women), an interaction of genetic factors with lifestyle and environ- including 1196 subjects (677 men, 519 women) with obesity mental factors (1), is rapidly increasing worldwide. A sedentary (body mass index of ≥25 kg/m2) and 2710 controls (1609 men, lifestyle, high-fat and high-energy diet, and genetic pre- 1101 women). The genotypes for 147 polymorphisms of 124 disposition to obesity all contribute to the epidemic. Although candidate genes were determined with a method that combines genetic linkage analyses (2-5) and candidate gene approaches the polymerase chain reaction and sequence-specific (6-9) have implicated several loci and candidate genes in oligonucleotide probes with suspension array technology. predisposition to obesity, the genes that contribute to genetic Multivariable logistic regression analysis with adjustment for susceptibility to this condition remain to be identified age, sex, and the prevalence of smoking revealed that the - definitively.
    [Show full text]