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1 1 DNA Barcodes Reveal Deeply Neglected Diversity and Numerous
Page 1 of 57 1 DNA barcodes reveal deeply neglected diversity and numerous invasions of micromoths in 2 Madagascar 3 4 5 Carlos Lopez-Vaamonde1,2, Lucas Sire2, Bruno Rasmussen2, Rodolphe Rougerie3, 6 Christian Wieser4, Allaoui Ahamadi Allaoui 5, Joël Minet3, Jeremy R. deWaard6, Thibaud 7 Decaëns7, David C. Lees8 8 9 1 INRA, UR633, Zoologie Forestière, F- 45075 Orléans, France. 10 2 Institut de Recherche sur la Biologie de l’Insecte, UMR 7261 CNRS Université de Tours, UFR 11 Sciences et Techniques, Tours, France. 12 3Institut de Systématique Evolution Biodiversité (ISYEB), Muséum national d'Histoire naturelle, 13 CNRS, Sorbonne Université, EPHE, 57 rue Cuvier, CP 50, 75005 Paris, France. 14 4 Landesmuseum für Kärnten, Abteilung Zoologie, Museumgasse 2, 9020 Klagenfurt, Austria 15 5 Department of Entomology, University of Antananarivo, Antananarivo 101, Madagascar 16 6 Centre for Biodiversity Genomics, University of Guelph, 50 Stone Road E., Guelph, ON 17 N1G2W1, Canada 18 7Centre d'Ecologie Fonctionnelle et Evolutive (CEFE UMR 5175, CNRS–Université de Genome Downloaded from www.nrcresearchpress.com by UNIV GUELPH on 10/03/18 19 Montpellier–Université Paul-Valéry Montpellier–EPHE), 1919 Route de Mende, F-34293 20 Montpellier, France. 21 8Department of Life Sciences, Natural History Museum, Cromwell Road, SW7 5BD, UK. 22 23 24 Email for correspondence: [email protected] For personal use only. This Just-IN manuscript is the accepted prior to copy editing and page composition. It may differ from final official version of record. 1 Page 2 of 57 25 26 Abstract 27 Madagascar is a prime evolutionary hotspot globally, but its unique biodiversity is under threat, 28 essentially from anthropogenic disturbance. -
DNA Barcodes Reveal Deeply Neglected Diversity and Numerous Invasions of Micromoths in Madagascar
Genome DNA barcodes reveal deeply neglected diversity and numerous invasions of micromoths in Madagascar Journal: Genome Manuscript ID gen-2018-0065.R2 Manuscript Type: Article Date Submitted by the 17-Jul-2018 Author: Complete List of Authors: Lopez-Vaamonde, Carlos; Institut National de la Recherche Agronomique (INRA), ; Institut de Recherche sur la Biologie de l’Insecte (IRBI), Sire, Lucas; Institut de Recherche sur la Biologie de l’Insecte Rasmussen,Draft Bruno; Institut de Recherche sur la Biologie de l’Insecte Rougerie, Rodolphe; Institut Systématique, Evolution, Biodiversité (ISYEB), Wieser, Christian; Landesmuseum für Kärnten Ahamadi, Allaoui; University of Antananarivo, Department Entomology Minet, Joël; Institut de Systematique Evolution Biodiversite deWaard, Jeremy; Biodiversity Institute of Ontario, University of Guelph, Decaëns, Thibaud; Centre d'Ecologie Fonctionnelle et Evolutive (CEFE UMR 5175, CNRS–Université de Montpellier–Université Paul-Valéry Montpellier–EPHE), , CEFE UMR 5175 CNRS Lees, David; Natural History Museum London Keyword: Africa, invasive alien species, Lepidoptera, Malaise trap, plant pests Is the invited manuscript for consideration in a Special 7th International Barcode of Life Issue? : https://mc06.manuscriptcentral.com/genome-pubs Page 1 of 57 Genome 1 DNA barcodes reveal deeply neglected diversity and numerous invasions of micromoths in 2 Madagascar 3 4 5 Carlos Lopez-Vaamonde1,2, Lucas Sire2, Bruno Rasmussen2, Rodolphe Rougerie3, 6 Christian Wieser4, Allaoui Ahamadi Allaoui 5, Joël Minet3, Jeremy R. deWaard6, Thibaud 7 Decaëns7, David C. Lees8 8 9 1 INRA, UR633, Zoologie Forestière, F- 45075 Orléans, France. 10 2 Institut de Recherche sur la Biologie de l’Insecte, UMR 7261 CNRS Université de Tours, UFR 11 Sciences et Techniques, Tours, France. -
Genome Analysis of a Novel Clade B Betabaculovirus Isolated from the Legume Pest Matsumuraeses Phaseoli (Lepidoptera: Tortricidae)
viruses Article Genome Analysis of a Novel Clade b Betabaculovirus Isolated from the Legume Pest Matsumuraeses phaseoli (Lepidoptera: Tortricidae) Ruihao Shu 1, Qian Meng 1, Lin Miao 1, Hongbin Liang 2, Jun Chen 2, Yuan Xu 2, Luqiang Cheng 1,3, Wenyi Jin 1,4, Qilian Qin 1 and Huan Zhang 1,* 1 State Key Laboratory of Integrated Management of Pest Insects and Rodents, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China; [email protected] (R.S.); [email protected] (Q.M.); [email protected] (L.M.); [email protected] (L.C.); [email protected] (W.J.); [email protected] (Q.Q.) 2 National Animal Collection Resource Center, Institute of Zoology, Chinese Academy of Sciences, Beijing 100101, China; [email protected] (H.L.); [email protected] (J.C.); [email protected] (Y.X.) 3 College of Horticulture and Plant Protection, Yangzhou University, Yangzhou 225009, China 4 College of Life Sciences, Hebei University, Baoding 071002, China * Correspondence: [email protected] Received: 25 August 2020; Accepted: 20 September 2020; Published: 23 September 2020 Abstract: Matsumuraeses phaseoli is a Lepidopteran pest that primarily feeds on numerous species of cultivated legumes, such as Glycine and Phaseolus. It is widely distributed in northeast Asia. A novel granulovirus, designated as Matsumuraeses phaseoli granulovirus (MaphGV), was isolated from pathogenic M. phaseoli larvae that dwell in rolled leaves of Astragalus membranaceus, a Chinese medicinal herb. In this study, using next-generation sequencing, we report the complete genome of MaphGV. MaphGV genome comprises a double-stranded DNA of 116,875 bp, with 37.18% GC content. -
Contrasting Patterns of Karyotype and Sex Chromosome Evolution in Lepidoptera
School of Doctoral Studies in Biological Sciences University of South Bohemia in České Budějovice Faculty of Science Contrasting patterns of karyotype and sex chromosome evolution in Lepidoptera Ph.D. Thesis Mgr. Jindra Šíchová Supervisor: Prof. RNDr. František Marec, CSc. Biology Centre of the Czech Academy of Sciences, Institute of Entomology České Budějovice 2016 This thesis should be cited as: Šíchová J (2016) Contrasting patterns of karyotype and sex chromosome evolution in Lepidoptera. Ph.D. Thesis. University of South Bohemia, Faculty of Science, School of Doctoral Studies in Biological Sciences, České Budějovice, Czech Republic, 91 pp. Annotation It is known that chromosomal rearrangements play an important role in speciation by limiting gene flow within and between species. Furthermore, this effect may be enhanced by involvement of sex chromosomes that are known to undergo fast evolution compared to autosomes and play a special role in speciation due to their engagement in postzygotic reproductive isolation. The work presented in this study uses various molecular- genetic and cytogenetic techniques to describe karyotype and sex chromosome evolution of two groups of Lepidoptera, namely selected representatives of the family Tortricidae and Leptidea wood white butterflies of the family Pieridae. The acquired knowledge points to unexpected evolutionary dynamics of lepidopteran karyotypes including the presence of derived neo-sex chromosome systems that originated as a result of chromosomal rearrangements. We discuss the significance of these findings for radiation and subsequent speciation of both lepidopteran groups. Declaration [in Czech] Prohlašuji, že svoji disertační práci jsem vypracovala samostatně pouze s použitím pramenů a literatury uvedených v seznamu citované literatury. Prohlašuji, že v souladu s § 47b zákona č. -
Apoidea (Insecta: Hymenoptera). Fauna of New Zealand 57, 295 Pp. Donovan, B. J. 2007
Donovan, B. J. 2007: Apoidea (Insecta: Hymenoptera). Fauna of New Zealand 57, 295 pp. EDITORIAL BOARD REPRESENTATIVES OF L ANDCARE R ESEARCH Dr D. Choquenot Landcare Research Private Bag 92170, Auckland, New Zealand Dr R. J. B. Hoare Landcare Research Private Bag 92170, Auckland, New Zealand REPRESENTATIVE OF UNIVERSITIES Dr R.M. Emberson c/- Bio-Protection and Ecology Division P.O. Box 84, Lincoln University, New Zealand REPRESENTATIVE OF M USEUMS Mr R.L. Palma Natural Environment Department Museum of New Zealand Te Papa Tongarewa P.O. Box 467, Wellington, New Zealand REPRESENTATIVE OF OVERSEAS I NSTITUTIONS Dr M. J. Fletcher Director of the Collections NSW Agricultural Scientific Collections Unit Forest Road, Orange NSW 2800, Australia * * * SERIES EDITOR Dr T. K. Crosby Landcare Research Private Bag 92170, Auckland, New Zealand Fauna of New Zealand Ko te Aitanga Pepeke o Aotearoa Number / Nama 57 Apoidea (Insecta: Hymenoptera) B. J. Donovan Donovan Scientific Insect Research, Canterbury Agriculture and Science Centre, Lincoln, New Zealand [email protected] Manaaki W h e n u a P R E S S Lincoln, Canterbury, New Zealand 2007 4 Donovan (2007): Apoidea (Insecta: Hymenoptera) Copyright © Landcare Research New Zealand Ltd 2007 No part of this work covered by copyright may be reproduced or copied in any form or by any means (graphic, electronic, or mechanical, including photocopying, recording, taping information retrieval systems, or otherwise) without the written permission of the publisher. Cataloguing in publication Donovan, B. J. (Barry James), 1941– Apoidea (Insecta: Hymenoptera) / B. J. Donovan – Lincoln, N.Z. : Manaaki Whenua Press, Landcare Research, 2007. (Fauna of New Zealand, ISSN 0111–5383 ; no. -
Pollination of Cultivated Plants in the Tropics 111 Rrun.-Co Lcfcnow!Cdgmencle
ISSN 1010-1365 0 AGRICULTURAL Pollination of SERVICES cultivated plants BUL IN in the tropics 118 Food and Agriculture Organization of the United Nations FAO 6-lina AGRICULTUTZ4U. ionof SERNES cultivated plans in tetropics Edited by David W. Roubik Smithsonian Tropical Research Institute Balboa, Panama Food and Agriculture Organization of the United Nations F'Ø Rome, 1995 The designations employed and the presentation of material in this publication do not imply the expression of any opinion whatsoever on the part of the Food and Agriculture Organization of the United Nations concerning the legal status of any country, territory, city or area or of its authorities, or concerning the delimitation of its frontiers or boundaries. M-11 ISBN 92-5-103659-4 All rights reserved. No part of this publication may be reproduced, stored in a retrieval system, or transmitted in any form or by any means, electronic, mechanical, photocopying or otherwise, without the prior permission of the copyright owner. Applications for such permission, with a statement of the purpose and extent of the reproduction, should be addressed to the Director, Publications Division, Food and Agriculture Organization of the United Nations, Viale delle Terme di Caracalla, 00100 Rome, Italy. FAO 1995 PlELi. uion are ted PlauAr David W. Roubilli (edita Footli-anal ISgt-iieulture Organization of the Untled Nations Contributors Marco Accorti Makhdzir Mardan Istituto Sperimentale per la Zoologia Agraria Universiti Pertanian Malaysia Cascine del Ricci° Malaysian Bee Research Development Team 50125 Firenze, Italy 43400 Serdang, Selangor, Malaysia Stephen L. Buchmann John K. S. Mbaya United States Department of Agriculture National Beekeeping Station Carl Hayden Bee Research Center P. -
Biji, Perkecambahan, Dan Potensinya 147‐153 RONY IRAWANTO, DEWI AYU LESTARI, R
Seminar Nasional& International Conference Pros Sem Nas Masy Biodiv Indon vol. 3 | no. 1 | pp. 1‐167 | Februari 2017 ISSN: 2407‐8050 Tahir Awaluddin foto: , Timur Kalimantan Derawan, di Penyelenggara & Pendukung tenggelam Matahari | vol. 3 | no. 1 | pp. 1-167 | Februari 2017 | ISSN: 2407-8050 | DEWAN PENYUNTING: Ketua, Ahmad Dwi Setyawan, Universitas Sebelas Maret, Surakarta Anggota, Sugiyarto, Universitas Sebelas Maret, Surakarta Anggota, Ari Pitoyo, Universitas Sebelas Maret, Surakarta Anggota, Sutomo, UPT Balai Konservasi Tumbuhan Kebun Raya “Eka Karya”, LIPI, Tabanan, Bali Anggota, A. Widiastuti, Balai Besar Pengembangan Pengujian Mutu Benih Tanaman Pangan dan Hortikultura, Depok Anggota, Gut Windarsih, Pusat Penelitian Biologi, LIPI, Cibinong, Bogor Anggota, Supatmi, Pusat Penelitian Bioteknologi, LIPI, Cibinong, Bogor PENYUNTING TAMU (PENASEHAT): Artini Pangastuti, Universitas Sebelas Maret, Surakarta Heru Kuswantoro, Balai Penelitian Tanaman Aneka Kacang dan Umbi, Malang Nurhasanah, Universitas Mulawarman, Samarinda Solichatun, Universitas Sebelas Maret, Surakarta Yosep Seran Mau, Universitas Nusa Cendana, Kupang PENERBIT: Masyarakat Biodiversitas Indonesia PENERBIT PENDAMPING: Program Biosains, Program Pascasarjana, Universitas Sebelas Maret Surakarta Jurusan Biologi, FMIPA, Universitas Sebelas Maret Surakarta PUBLIKASI PERDANA: 2015 ALAMAT: Kantor Jurnal Biodiversitas, Jurusan Biologi, Gd. A, Lt. 1, FMIPA, Universitas Sebelas Maret Jl. Ir. Sutami 36A Surakarta 57126. Tel. & Fax.: +62-271-663375, Email: [email protected] -
The Microlepidopterous Fauna of Sri Lanka, Formerly Ceylon, Is Famous
ON A COLLECTION OF SOME FAMILIES OF MICRO- LEPIDOPTERA FROM SRI LANKA (CEYLON) by A. DIAKONOFF Rijksmuseum van Natuurlijke Historie, Leiden With 65 text-figures and 18 plates CONTENTS Preface 3 Cochylidae 5 Tortricidae, Olethreutinae, Grapholitini 8 „ „ Eucosmini 23 „ „ Olethreutini 66 „ Chlidanotinae, Chlidanotini 78 „ „ Polyorthini 79 „ „ Hilarographini 81 „ „ Phricanthini 81 „ Tortricinae, Tortricini 83 „ „ Archipini 95 Brachodidae 98 Choreutidae 102 Carposinidae 103 Glyphipterigidae 108 A list of identified species no A list of collecting localities 114 Index of insect names 117 Index of latin plant names 122 PREFACE The microlepidopterous fauna of Sri Lanka, formerly Ceylon, is famous for its richness and variety, due, without doubt, to the diversified biotopes and landscapes of this beautiful island. In spite of this, there does not exist a survey of its fauna — except a single contribution, by Lord Walsingham, in Moore's "Lepidoptera of Ceylon", already almost a hundred years old, and a number of small papers and stray descriptions of new species, in various journals. The authors of these papers were Walker, Zeller, Lord Walsingham and a few other classics — until, starting with 1905, a flood of new descriptions 4 ZOOLOGISCHE VERHANDELINGEN I93 (1982) and records from India and Ceylon appeared, all by the hand of Edward Meyrick. He was almost the single specialist of these faunas, until his death in 1938. To this great Lepidopterist we chiefly owe our knowledge of all groups of Microlepidoptera of Sri Lanka. After his death this information stopped abruptly. In the later years great changes have taken place in the tropical countries. We are now facing, alas, the disastrously quick destruction of natural bio- topes, especially by the reckless liquidation of the tropical forests. -
1996 No. 4 December
TROPICAL LEPIDOPTERA NEWS December 1996 No.4 LEPIDOPTERORUM CATALOGUS (New Series) The new world catalog of Lepidoptera renews the series title The new series (as edited by J. B. Heppner) began already in first begun in 1911. The original catalog series was published by 1989 with publication of the catalog of Noctuidae, by R. Poole. W. Junk Publishers of Berlin, Germany (later The Hague, E. J. Brill Publishers, of Leiden, Netherlands, published this first Netherlands), continuing until 1939 when the incomplete series fascicle in 3 volumes, covering already about a third of all known was deactivated due to World War II. The original series Lepidoptera. Since ATL took over the series, several families completed a large number of families between 1911 and 1939, have been readied for publication. Already this month, Fascicle totalling about 3 shelf-feet of text. Most Microlepidoptera, 48, on Epermeniidae, was published (authored by R. Gaedike, of however, were not covered, as also several macro families like the Deutsches Entomologisches Institut, Eberswalde, Germany). Noctuidae, and several families are incomplete (e.g., Geometridae In 1997, several other smaller families are expected, including and Pyralidae). Even for what was treated, the older catalogs are Acanthopteroctetidae (Davis), Acrolepiidae (Gaedike), Cecidosi now greatly out of date, due to the description of many new dae (Davis), Cercophanidae (Becker), Glyphipterigidae (Heppner), species and many changes in nomenclature over the last 5 to 8 Neotheoridae (Kristensen), Ochsenheimeriidae (Davis), Opostegi decades. dae (Davis), and Oxytenidae (Becker). Much of the publication The new series resembles the old series in some ways but it schedule depends on the cooperation of various specialists who will also have features not found in the old work. -
First Record of the Sedge Feeder Bactra Verutana Zeller (Lepidoptera
Revista Brasileira de Entomologia 63 (2019) 104–107 REVISTA BRASILEIRA DE Entomologia A Journal on Insect Diversity and Evolution www.rbentomologia.com Short Communication First record of the sedge feeder Bactra verutana Zeller (Lepidoptera: Tortricidae) in Chile based on morphology and DNA barcodes a,∗ b Héctor A. Vargas , Marcelo Vargas-Ortiz a Universidad de Tarapacá, Facultad de Ciencias Agronómicas, Departamento de Recursos Ambientales, Arica, Chile b Universidad de Concepción, Facultad de Ciencias Naturales y Oceanográficas, Departamento de Zoología, Programa de Doctorado en Sistemática y Biodiversidad Concepción, Chile a r a b s t r a c t t i c l e i n f o Article history: The sedge-feeding moth Bactra verutana Zeller, 1875 (Lepidoptera: Tortricidae: Olethreutinae: Bactrini), Received 4 October 2018 described from Dallas, Texas, USA, is widespread, recorded throughout much North America, Central Accepted 27 February 2019 and South America, including the Caribbean, and Africa. The species is recorded for the first time from Available online 21 March 2019 Chile based on specimens collected in the coastal valleys of the Atacama Desert, where its larvae feed Associate Editor: Livia Pinheiro on Cyperus corymbosus Rottb. var. subnodosus (Nees & Meyen) Kük. (Cyperaceae). A single DNA barcode haplotype, which is widespread in USA, was found in two Chilean specimens sequenced. Keywords: © 2019 Sociedade Brasileira de Entomologia. Published by Elsevier Editora Ltda. This is an open Atacama Desert Cyperaceae access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). Cyperus corymbosus DNA barcoding Bactra Stephens, 1834 (Olethreutinae: Bactrini) is a widespread sequences (sensu Hebert et al., 2003) were used to assess the rela- genus of Tortricidae (Lepidoptera) with 106 described species tionships of the Chilean specimens. -
Jurnal MIPA 35 (1) (2012)
Jurnal MIPA 35 (1) (2012) Jurnal MIPA http://journal.unnes.ac.id/nju/index.php/JM KEANEKARAGAMAN JENIS KUPU-KUPU SUPERFAMILI PAPILIONOIDAE DI DUKUH BANYUWINDU DESA LIMBANGAN KECAMATAN LIMBANGAN KABUPATEN KENDAL M. Rahayuningsih, R. Oqtaiana, B. Priyono Jurusan Biologi, Fakultas Matematika dan Ilmu Pengetahuan Alam, Universitas Negeri Semarang, Indonesia Info Artikel Abstrak Sejarah Artikel: Kupu-kupu merupakan bagian dari biodiversitas yang harus dijaga kelestariannya. Diterima 20 Januari 2012 Kupu-kupu memberikan keuntungan bagi kehidupan manusia. Secara ekologis Disetujui 14 Maret 2012 kupu-kupu memberikan sumbangan dalam menjaga keseimbangan ekosistem dan Dipublikasikan April 2012 memperkaya biodiversitas. Dukuh Banyuwindu merupakan salah satu pedukuhan di Desa Limbangan terletak di lembah dan berperan sebagai daerah ekoturisme. Keywords: Tujuan kajian ini adalah untuk menentukan keanekaragaman spesies kupu-kupu Banyuwindu superfamili Papilionoidae di Dukuh Banyuwindu Desa Limbangan Kabupaten Biodiversity Kendal, khususnya pada habitat hutan sekunder, pemukiman, daerah aliran sungai, Papilionoidae dan persawahan. Penelitian dilakukan dengan metode Abundance Point Index. Butterly Penelitian menunjukkan terdapat 62 spesies kupu-kupu superfamili Papilionoidae Papilionoidae, Pieridae, Lycaenidae, dan Nymphalidae. Indeks keanekaragaman jenisyang kupu-kuputerdiri dari superfamili737 individu Papilionoidae dan diklasiikasikan di Dukuh menjadi Banyuwindu empat berkisar famili dinamai antara 2,74-3,09, indeks kemerataan jenis berkisar antara 0,86-0,87 dan memiliki dominansi berkisar antara 0,07-0,09. Indeks keanekaragaman jenis dan indeks kemerataan jenis tertinggi tercatat pada habitat pemukiman yaitu 3,09 dan 0,87 sedangkan terendah tercatat pada habitat persawahan masing-masing sebesar 2,74 dan 0,86. Abstract The butterlies are part of biodiversity which must be preserved. These insect provide beneits to human life. -
ARTHROPODA Subphylum Hexapoda Protura, Springtails, Diplura, and Insects
NINE Phylum ARTHROPODA SUBPHYLUM HEXAPODA Protura, springtails, Diplura, and insects ROD P. MACFARLANE, PETER A. MADDISON, IAN G. ANDREW, JOCELYN A. BERRY, PETER M. JOHNS, ROBERT J. B. HOARE, MARIE-CLAUDE LARIVIÈRE, PENELOPE GREENSLADE, ROSA C. HENDERSON, COURTenaY N. SMITHERS, RicarDO L. PALMA, JOHN B. WARD, ROBERT L. C. PILGRIM, DaVID R. TOWNS, IAN McLELLAN, DAVID A. J. TEULON, TERRY R. HITCHINGS, VICTOR F. EASTOP, NICHOLAS A. MARTIN, MURRAY J. FLETCHER, MARLON A. W. STUFKENS, PAMELA J. DALE, Daniel BURCKHARDT, THOMAS R. BUCKLEY, STEVEN A. TREWICK defining feature of the Hexapoda, as the name suggests, is six legs. Also, the body comprises a head, thorax, and abdomen. The number A of abdominal segments varies, however; there are only six in the Collembola (springtails), 9–12 in the Protura, and 10 in the Diplura, whereas in all other hexapods there are strictly 11. Insects are now regarded as comprising only those hexapods with 11 abdominal segments. Whereas crustaceans are the dominant group of arthropods in the sea, hexapods prevail on land, in numbers and biomass. Altogether, the Hexapoda constitutes the most diverse group of animals – the estimated number of described species worldwide is just over 900,000, with the beetles (order Coleoptera) comprising more than a third of these. Today, the Hexapoda is considered to contain four classes – the Insecta, and the Protura, Collembola, and Diplura. The latter three classes were formerly allied with the insect orders Archaeognatha (jumping bristletails) and Thysanura (silverfish) as the insect subclass Apterygota (‘wingless’). The Apterygota is now regarded as an artificial assemblage (Bitsch & Bitsch 2000).