Polygonal Approximation of Unknots by Quadrisecants

Total Page:16

File Type:pdf, Size:1020Kb

Polygonal Approximation of Unknots by Quadrisecants Gyo Taek Jin Polygonal approximation of unknots by quadrisecants Abstract: If a knot K in R3 has only finitely many quadrisecants which meet K at finitely many points, we use these points to form a polygonal approximation called the quadrisecant approximation which is denoted by Kb. The quadrisecant approxima- tion conjecture states that Kb has the knot type of K if K is nontrivial. We give examples of unknots, some polygonal and some smooth, having finitely many but at least two quadrisecants, for which the conjecture holds. Keywords: knots, quadrisecants, polygonal approximation MSC: 57M25 8.1 Introduction A knot K is the image of a locally flat embedding of S1 in R3, i.e., we do not consider wild knots. A quadrisecant of a knot K is a straight line which meets K at four distinct places. The existence of quadrisecants for nontrivial knots was first announced by Pannwitz in 1933 for polygonal knots and later by Morton and Mond for smooth knots and by Kuperberg for tame knots. Fig. 8.1: A quadrisecant Theorem 8.1.1 ([10, 9, 8]). Every nontrivial knot has a quadrisecant. It is not hard to see that every knot can be perturbed to have infinitely many quadrise- cants. On the other hand, every knot can be perturbed to have only finitely many quadrisecants which meet the knot at finitely many points. Gyo Taek Jin, Korea Advanced Institute of Science and Technology, 291 Daehak-ro Yuseong-gu Dae- jeon Korea 34141, E-mail: [email protected] https://doi.org/10.1515/9783110571493-007 Open Access. © 2018 Gyo Taek Jin, published by De Gruyter. This work is licensed under the Creative Commons Attribution-NonCommercial-NoDerivs 4.0 License. 160 | Gyo Taek Jin Theorem 8.1.2 ([1, 6]). A polygonal knot satisfying the following conditions has only finitely many quadrise- cants8.1. 1. No four vertices are coplanar. 2. No three edges are parallel to a single plane. 3. No four edges lie on a single hyperboloid of one sheet. Definition 8.1.3. A polygonal knot is said to be in general position if it satisfies the three conditions mentioned in Theorem 8.1.2. 8.2 Quadrisecant approximation of knots 3 Definition 8.2.1. Let α :[a, b] ! R be a parametrization of a knot K and let a ≤ t1 < ··· < tn = t0 < b, for some n ≥ 3. Then the polygonal closed curve ′ K = α(t0)α(t1) [ α(t1)α(t2) [ ··· [ α(tn−1)α(tn) is called a polygonal approximation, or simply, an approximation of the knot K. It may happen that K′ has one or more self intersection points. We say that the polygonal approximation K′ of K is a good approximation if K′ is a knot which has the knot type of K. Definition 8.2.2. Suppose that K is a knot having only finitely many quadrisecants which intersect K in finitely many points. The polygonal approximation of K using the points on the quadrisecants is called the quadrisecant approximation of K and is denoted by Kb. Fig. 8.2: A good approximation and a bad approximation 8.1 Possibly no quadrisecants in the case of an unknot Polygonal approximation of unknots by quadrisecants | 161 Fig. 8.3: The quadrisecant approximation of a smooth trefoil knot Figure 8.3 shows that the quadrisecant approximation of a smooth trefoil is a good approximation and Figure 8.4 shows that the quadrisecant approximations of a polyg- onal trefoil and a polygonal figure eight knot are good approximations. Conjecture 8.2.3 (Quadrisecant approximation conjecture8.2). Let K be a nontrivial knot having only finitely many quadrisecants which intersect K in finitely many points. Then 1. Kb is a good approximation of K. 2. The quadrisecants of Kb are those of K. Theorem 8.2.4 ([7, 11]). The quadrisecant approximation conjecture holds for 1. hexagonal trefoil knots and 2. heptagonal figure eight knots in general position. Fig. 8.4: The quadrisecant approximations of a polygonal 31 and a polygonal 41 8.2 In the original statement of the conjecture in [6], the word ‘nontrivial’ is missing. 162 | Gyo Taek Jin 8.3 Quadrisecants of Polygonal Unknots In this part, we examined the part 1 of the quadrisecant approximation conjecture for 133 polygonal unknots of which the vertex data were supplied by Claus Ernst [4]. It is explained in Section 8.5 how we obtained quadrisecants, and in Section 8.6 how we confirmed quadrisecant approximations are good. Example 8.3.1. We examined thirty 10-gonal unknots. They have 9.1 quadrisecants in average. Except the four cases of less than 2 quadrisecants, the quadrisecant ap- proximations are unknots. The quadrisecant approximation is not defined or not em- bedded if there exist less than two quadrisecants. Figure 8.6 shows two unknots which have no quadrisecant and only one quadrisecant. In each of Figures 8.7 and 8.8, the quadrisecants are shown on the left and the quadrisecant approximation is shown on the right. 0 2 28 0 10 20 30 Fig. 8.5: Distribution of quadrisecants of thirty 10-gonal unknots Fig. 8.6: 10-gonal unknots with 0 and 1 quadrisecant Fig. 8.7: A 10-gonal unknot with 9 quadrisecants and its quadrisecant approximation Polygonal approximation of unknots by quadrisecants | 163 Fig. 8.8: A 10-gonal unknot with 28 quadrisecants and its quadrisecant approximation Example 8.3.2. We examined thirty 20-gonal unknots. They have 305.5 quadrise- cants in average. All quadrisecant approximations are unknots. Figures 8.10 and 8.11 show two of them. 83 764 0 200 400 600 800 Fig. 8.9: Distribution of quadrisecants of thirty 20-gonal unknots Fig. 8.10: A 20-gonal unknot with 83 quadrisecants and its quadrisecant approximation 164 | Gyo Taek Jin Fig. 8.11: A 20-gonal unknot with 764 quadrisecants and its quadrisecant approximation Example 8.3.3. We examined thirty 30-gonal unknots. They have 1577.4 quadrise- cants in average. All quadrisecant approximations are unknots. Figure 8.13 shows one of them; the knot, its quadrisecants, and its quadrisecant approximation with those quadrisecants incident to the new vertices. 847 2395 0 500 1000 1500 2000 2500 Fig. 8.12: Distribution of quadrisecants of thirty 30-gonal unknots Fig. 8.13: A 30-gonal unknot with 1,431 quadrisecants and its quadrisecant approximation Polygonal approximation of unknots by quadrisecants | 165 Example 8.3.4. We examined thirty 40-gonal unknots. They have 5317.1 quadrise- cants in average. All quadrisecant approximations are unknots. Figure 8.15 shows one of them. 3560 7724 0 2000 4000 6000 8000 Fig. 8.14: Distribution of quadrisecants of thirty 40-gonal unknots Fig. 8.15: A 40-gonal unknot with 6,275 quadrisecants and its quadrisecant approximation Example 8.3.5. We examined thirteen 50-gonal unknots. They have 13161.4 quadrisecants in average. All quadrisecant approximations are unknots. Figure 8.17 shows one of them. 9175 15920 0 4000 8000 12000 16000 Fig. 8.16: Distribution of quadrisecants of thirteen 50-gonal unknots 166 | Gyo Taek Jin Fig. 8.17: A 50-gonal unknot with 15,920 quadrisecants and its quadrisecant approximation 8.4 Quadrisecants of Smooth Unknots We constructed seven smooth unknots to examine the part 1 of the quadrisecant ap- proximation conjecture. It is explained in Section 8.5 how we obtained quadrisecants, and in Section 8.6 how we confirmed quadrisecant approximations are good. Example 8.4.1. Figure 8.18 shows a smooth unknot, its quadrisecants and the quadrisecant approximation. With a = 1, 000 random choices of four points on this knot, we performed Newton’s method and obtained b = 184 quadrisecants. Reduc- ing duplicates, we obtained c = 99 quadrisecants as shown in the middle. Among the a−b = 816 failures, d = 27 cases diverged and e = 789 cases converged with less than four secant points. The approximation shown on the right is a good approximation. Fig. 8.18: A smooth unknot with 99 quadrisecants and its quadrisecant approximation Polygonal approximation of unknots by quadrisecants | 167 Example 8.4.2. Figure 8.19 shows a smooth unknot. We performed Newton’s method with a = 1, 000, b = 143, c = 107, d = 28, and e = 829 as in Example 8.4.1, and obtained a good approximation. Fig. 8.19: A smooth unknot with 107 quadrisecants and its quadrisecant approximation Example 8.4.3. Figure 8.20 shows a smooth unknot. We performed Newton’s method with a = 1, 000, b = 54, c = 31, d = 19, and e = 927 as in Example 8.4.1, and obtained a good approximation. Fig. 8.20: A smooth unknot with 31 quadrisecants and its quadrisecant approximation 168 | Gyo Taek Jin Example 8.4.4. Figure 8.21 shows the smooth unknot parametrized by 8 x (︀ 1 t t)︀ t > = 2 cos 3 + 4 + cos 2 cos 6 < (︀ )︀ y = 1 cos 3 t + 4 + cos 2 t sin 6 t 0 ≤ t ≤ 2π > 2 :>z t 1 t = 4 sin 2 − 2 sin 3 We performed Newton’s method with a = 1, 000, b = 129, c = 51, d = 6, and e = 865 as in Example 8.4.1, and obtained a good approximation. Fig. 8.21: A smooth unknot with 51 quadrisecants and its quadrisecant approximation Example 8.4.5. Figure 8.22 shows the smooth unknot parametrized by 8 x (︀ 1 t t)︀ t > = 2 cos 5 + 4 + cos 3 cos 9 < (︀ )︀ y = 1 cos 5 t + 4 + cos 3 t sin 9 t 0 ≤ t ≤ 2π > 2 :>z t 1 t = 4 sin 3 − 2 sin 5 We performed Newton’s method with a = 1, 000, b = 152, c = 121, d = 44, and e = 804 as in Example 8.4.1, and obtained a good approximation.
Recommended publications
  • Arxiv:1502.03029V2 [Math.GT] 16 Apr 2015 De.Then Edges
    COUNTING GENERIC QUADRISECANTS OF POLYGONAL KNOTS ALDO-HILARIO CRUZ-COTA, TERESITA RAMIREZ-ROSAS Abstract. Let K be a polygonal knot in general position with vertex set V . A generic quadrisecant of K is a line that is disjoint from the set V and intersects K in exactly four distinct points. We give an upper bound for the number of generic quadrisecants of a polygonal knot K in general position. This upper bound is in terms of the number of edges of K. 1. Introduction In this article, we study polygonal knots in three dimensional space that are in general position. Given such a knot K, we define a quadrisecant of K as an unoriented line that intersects K in exactly four distinct points. We require that these points are not vertices of the knot, in which case we say that the quadrisecant is generic. Using geometric and combinatorial arguments, we give an upper bound for the number of generic quadrisecants of a polygonal knot K in general position. This bound is in terms of the number n ≥ 3 of edges of K. More precisely, we prove the following. Main Theorem 1. Let K be a polygonal knot in general position, with exactly n n edges. Then K has at most U = (n − 3)(n − 4)(n − 5) generic quadrisecants. n 12 Applying Main Theorem 1 to polygonal knots with few edges, we obtain the following. (1) If n ≤ 5, then K has no generic quadrisecant. (2) If n = 6, then K has at most three generic quadrisecants. (3) If n = 7, then K has at most 14 generic quadrisecants.
    [Show full text]
  • 1 Introduction
    Contents | 1 1 Introduction Is the “cable spaghetti” on the floor really knotted or is it enough to pull on both ends of the wire to completely unfold it? Since its invention, knot theory has always been a place of interdisciplinarity. The first knot tables composed by Tait have been motivated by Lord Kelvin’s theory of atoms. But it was not until a century ago that tools for rigorously distinguishing the trefoil and its mirror image as members of two different knot classes were derived. In the first half of the twentieth century, knot theory seemed to be a place mainly drivenby algebraic and combinatorial arguments, mentioning the contributions of Alexander, Reidemeister, Seifert, Schubert, and many others. Besides the development of higher dimensional knot theory, the search for new knot invariants has been a major endeav- our since about 1960. At the same time, connections to applications in DNA biology and statistical physics have surfaced. DNA biology had made a huge progress and it was well un- derstood that the topology of DNA strands matters: modeling of the interplay between molecules and enzymes such as topoisomerases necessarily involves notions of ‘knot- tedness’. Any configuration involving long strands or flexible ropes with a relatively small diameter leads to a mathematical model in terms of curves. Therefore knots appear almost naturally in this context and require techniques from algebra, (differential) geometry, analysis, combinatorics, and computational mathematics. The discovery of the Jones polynomial in 1984 has led to the great popularity of knot theory not only amongst mathematicians and stimulated many activities in this direction.
    [Show full text]
  • Closed Curves with No Quadrisecants
    View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Elsevier - Publisher Connector Topology Vol.‘ZI. No. 3. PP. 235-243. 1982 004&9383/82/030235-09SO3.00/0 Printed in Great Britain. @ 1982 Pergamon Press Ltd. CLOSED CURVES WITH NO QUADRISECANTS H. R. MORTON and D. M. Q. MONDt (Receioed 18 December 1980) $1. INTRODUCTION IN HIS PAPER[ 11, Wall discusses the idea of a generically embedded curve in BP’,related to the local appearance of the radially projected curve as viewed from different points in R3. Wall shows that a generic curve never meets a straight line in five points. There may, however, be finitely many straight lines, quadrisecants, which meet the curve in four points. The local view of the curve from distant points on a quadrisecant will have four branches crossing transversely. In this paper we ask how simple the embedding of a closed curve must be if the curve has no quadrisecants. Under a slight extension of Wall’s term generic to ensure a similar regularity of appearance of the curve when viewed from other points of the curve itself, we prove: THEOREM. A generically embedded closed curve with no quadrisecants is unknotted. We expect that in the non-generic case a knotted closed curve will have a genuine quadrisecant. (If we widened the definition of quadrisecant to allow the intersections of a line with the curve to be counted with multiplicity, including, e.g. a tangent line which meets the curve in two further points, then a limiting argument would produce at least a “fake” quadrisecant for a knotted closed curve.) Although the theorem deals with differentiable embeddings, it can be proved by a similar argument that a knotted PL curve in general position must have a quadrise- cant, other than one of its own straight edges.
    [Show full text]
  • Introduction to Geometric Knot Theory
    Introduction to Geometric Knot Theory Elizabeth Denne Smith College CCSU Math Colloquium, October 9, 2009 What is a knot? Definition A knot K is an embedding of a circle in R3. (Intuition: a smooth or polygonal closed curve without self-intersections.) A link is an embedding of a disjoint union of circles in R3. Trefoil knot Figure 8 knot Elizabeth Denne (Smith College) Geometric Knot Theory 9th October 2009 2 / 24 When are two knots the same? K1 and K2 are equivalent if K1 can be continuously moved to K2. (Technically, they are ambient isotopic.) A knot is trivial or unknotted if it is equivalent to a circle. A knot is tame if it is equivalent to a smooth knot. Elizabeth Denne (Smith College) Geometric Knot Theory 9th October 2009 3 / 24 When are two knots the same? K1 and K2 are equivalent if K1 can be continuously moved to K2. (Technically, they are ambient isotopic.) A knot is trivial or unknotted if it is equivalent to a circle. A knot is tame if it is equivalent to a smooth knot. Elizabeth Denne (Smith College) Geometric Knot Theory 9th October 2009 3 / 24 When are two knots the same? K1 and K2 are equivalent if K1 can be continuously moved to K2. (Technically, they are ambient isotopic.) A knot is trivial or unknotted if it is equivalent to a circle. A knot is tame if it is equivalent to a smooth knot. Elizabeth Denne (Smith College) Geometric Knot Theory 9th October 2009 3 / 24 Tame knots A wild knot p :: Elizabeth Denne (Smith College) Geometric Knot Theory 9th October 2009 4 / 24 How can you tell if two knots are equivalent? Idea Use topological invariants denoted by I.
    [Show full text]
  • The Second Hull of a Knotted Curve
    The Second Hull of a Knotted Curve 1, 2, 3, 4, Jason Cantarella, ∗ Greg Kuperberg, y Robert B. Kusner, z and John M. Sullivan x 1Department of Mathematics, University of Georgia, Athens, GA 30602 2Department of Mathematics, University of California, Davis, CA 95616 3Department of Mathematics, University of Massachusetts, Amherst, MA 01003 4Department of Mathematics, University of Illinois, Urbana, IL 61801 (Dated: May 5, 2000; revised April 4, 2002) The convex hull of a set K in space consists of points which are, in a certain sense, “surrounded” by K. When K is a closed curve, we define its higher hulls, consisting of points which are “multiply surrounded” by the curve. Our main theorem shows that if a curve is knotted then it has a nonempty second hull. This provides a new proof of the Fary/Milnor´ theorem that every knotted curve has total curvature at least 4π. A space curve must loop around at least twice to become knotted. This intuitive idea was captured in the celebrated Fary/Milnor´ theorem, which says the total curvature of a knot- ted curve K is at least 4π. We prove a stronger result: that there is a certain region of space doubly enclosed, in a precise sense, by K. We call this region the second hull of K. The convex hull of a connected set K is characterized by the fact that every plane through a point in the hull must in- teresect K. If K is a closed curve, then a generic plane inter- sects K an even number of times, so the convex hull is the set of points through which every plane cuts K twice.
    [Show full text]
  • Counterexamples to the Quadrisecant Approximation Conjecture
    COUNTEREXAMPLES TO THE QUADRISECANT APPROXIMATION CONJECTURE SHENG BAI, CHAO WANG, AND JIAJUN WANG Abstract. A quadrisecant of a knot is a straight line intersecting the knot at four points. If a knot has finitely many quadrisecants, one can replace each subarc between two adjacent secant points by the line segment between them to get the quadrisecant approximation of the original knot. It was conjectured that the quadrisecant approximation is always a knot with the same knot type as the original knot. We show that every knot type contains two knots, the quadrisecant approximation of one knot has self intersections while the quadrisecant approximation of the other knot is a knot with different knot type. 1. Introduction A quadrisecant for a knot is a line that intersects the knot in four points. In 1933, Pannwitz [10] showed that a generic polygonal knot in any nontrivial knot type must have at least two quadrisecants. This result was extended to smooth knots by Morton and Mond [9] and to tame knots by Kuperberg [8]. Quadrisecants was used to give lower bounds of the ropelength of a knot in [4]. The quadrisecant approximation of a knot was introduced by Jin in [6]. For a knot K with finitely many quadrisecants, let W be the set of intersection points of K with the quadrisecants. The quadrise- cant approximation of K, denoted by Kb, is obtained from K by replacing each subarc of K between two points in W adjacent along K with the straight line segment between them. If K has no quadrise- cants (which has to be an unknot), we let Kb = K.
    [Show full text]
  • Quadrisecants Give New Lower Boundsfor the Ropelength of a Knot
    Geometry & Topology 10 (2006) 1–26 1 Quadrisecants give new lower bounds for the ropelength of a knot ELIZABETH DENNE YUANAN DIAO JOHN MSULLIVAN Using the existence of a special quadrisecant line, we show the ropelength of any nontrivial knot is at least 15.66. This improves the previously known lower bound of 12. Numerical experiments have found a trefoil with ropelength less than 16.372, so our new bounds are quite sharp. 57M25; 49Q10, 53A04 1 Introduction The ropelength problem seeks to minimize the length of a knotted curve subject to maintaining an embedded tube of fixed radius around the curve; this is a mathematical model of tying the knot tight in rope of fixed thickness. More technically, the thickness .K/ of a space curve K is defined by Gonzalez and Maddocks[11] to be twice the infimal radius r.a; b; c/ of circles through any three distinct points of K. It is known from the work of Cantarella, Kusner and Sullivan[4] that .K/ 0 unless K is C 1;1 , meaning that its tangent direction is a Lipschitz D function of arclength. When K is C 1 , we can define normal tubes around K, and then indeed .K/ is the supremal diameter of such a tube that remains embedded. We note that in the existing literature thickness is sometimes defined to be the radius rather than diameter of this thick tube. We define ropelength to be the (scale-invariant) quotient of length over thickness. Because this is semi-continuous even in the C 0 topology on closed curves, it is not hard to show[4] that any (tame) knot or link type has a ropelength minimizer.
    [Show full text]
  • Quadrisecants Give New Lower Bounds for the Ropelength of a Knot
    Geometry & Topology 10 (2006) 1–26 1 arXiv version: fonts, pagination and layout may vary from GT published version Quadrisecants give new lower bounds for the ropelength of a knot ELIZABETH DENNE YUANAN DIAO JOHN MSULLIVAN Using the existence of a special quadrisecant line, we show the ropelength of any nontrivial knot is at least 15.66. This improves the previously known lower bound of 12. Numerical experiments have found a trefoil with ropelength less than 16.372, so our new bounds are quite sharp. 57M25; 49Q10, 53A04 1 Introduction The ropelength problem seeks to minimize the length of a knotted curve subject to maintaining an embedded tube of fixed radius around the curve; this is a mathematical model of tying the knot tight in rope of fixed thickness. More technically, the thickness τ(K) of a space curve K is defined by Gonzalez and Maddocks [11] to be twice the infimal radius r(a; b; c) of circles through any three distinct points of K. It is known from the work of Cantarella, Kusner and Sullivan [4] that τ(K) = 0 unless K is C1;1 , meaning that its tangent direction is a Lipschitz function of arclength. When K is C1 , we can define normal tubes around K, and then indeed τ(K) is the supremal diameter of such a tube that remains embedded. We note that in the existing literature thickness is sometimes defined to be the radius rather than diameter of this thick tube. We define ropelength to be the (scale-invariant) quotient of length over thickness.
    [Show full text]
  • Quadrisecants of Knots with Small Crossing Number 11
    QUADRISECANTS OF KNOTS WITH SMALL CROSSING NUMBER GYO TAEK JIN Abstract. It is known that every nontrivial knot has at least two quadrise- cants. In this paper we illustrate quadrisecants for several con¯gurations of the knots of crossing number up to ¯ve. Given a knot, we mark each intersec- tion point of each of its quadrisecants; replacing the subarcs between marked points by straight segments gives a modi¯ed knot called the quadrisecant ap- proximation. We conjecture that this always has the same knot type as the original. 1. Introduction A knot is a locally flat simple closed curve in the Euclidean space R3.A quadri- secant of a knot K is a straight line L such that K \L is a set of four points.[3, 5, 6] The knottedness of a knot K is the minimal number of singular points on the bound- ary of locally flat singular spanning disks of K.[2, 6] Theorem 1. A generic polygonal knot with knottedness k has at least k2=2 quadri- secants.[6] Corollary 2. Every nontrivial generic polygonal knot has at least two quadrise- cants. A polygonal knot is said to be in general position if no quadruple of vertices are coplanar, no triple of edges are linearly dependent, and no quadruple of edges are on a single hyperboloid of one sheet. Proposition 3. Every polygonal knot in general position has only ¯nitely many quadrisecants. Budney, Conant, Scannell and Sinha have the same result.[1] Since every smooth knot is arbitrarily close to a polygonal knot, we expect that smooth knots in gen- eral position have ¯nitely many quadrisecants.
    [Show full text]
  • Arxiv:Math/0510561V1 [Math.GT] 26 Oct 2005 Tlat2 Least at ..Mro N ...Mn [ Mond D.M.Q
    Alternating Quadrisecants of Knots Elizabeth Denne Abstract. It is known [Pann, Kup] that for every knotted curve in space, there is a line intersecting it in four places, a quadrisecant. Comparing the order of the four points along the line and the knot we can distinguish three types of quadrisecants; the alternating ones have the most relevance for the geometry of a knot. I show that every (nontrivial, tame) knot in R3 has an alternating quadrisecant. This result has applications to the total curvature, second hull and ropelength of knots. 1. Introduction Throughout this paper a knotted curve will denote an oriented nontrivial tame knot in R3. (By knot, we mean a homeomorphic image of S1 in R3, modulo reparametrizations. By tame, we mean the knot is ambient isotopic to a polygonal knot.) A secant line is a straight line which intersects the knot in at least two distinct places. Trisecant, quadrisecant and quintisecant lines are straight lines which intersect a knot in at least three, four and five distinct places, respectively. It is clear that any closed curve has a 2-parameter family secants. A simple dimension count shows there is a 1-parameter family of trisecants and that quadrisecants are discrete (0-parameter family). Quintisecants are a −1-parameter family; meaning they exist only for a codimension 1 set of knots (Proposition 6). Thus we expect knotted curves to have quadrisecants. Indeed, in 1933, E. Pan- nwitz [Pann] first showed that every nontrivial generic polygonal knot in R3 has 2 arXiv:math/0510561v1 [math.GT] 26 Oct 2005 at least 2u quadrisecants, where u is the unknotting number of a knot.
    [Show full text]
  • Topology with Biological Applications
    Topology with Biological Applications John M. Sullivan Institut fur¨ Mathematik, Technische Universitat¨ Berlin Berlin Mathematical School Geometry and Shape Analysis in Biological Sciences IMS, NUS, Singapore 2017 June 13 Berlin opportunities International graduate school Courses in English at three universities www.math-berlin.de John M. Sullivan (TU Berlin) Topology with Biological Applications 2017 June 13 2 / 39 Bending Energy: Lipid Vesicles and Sphere Eversions Geometric energies for surfaces Symmetric quadratic function of principal curvatures ZZ E := a + bK + c(H H )2 dA − 0 Gauß–Bonnet says RR K = const. thus irrelevant for variational problems If symmetric and fixed area 1 ZZ W := H2 dA 4π elastic bending energy for surfaces Scale-invariant, even Mobius-invariant¨ John M. Sullivan (TU Berlin) Topology with Biological Applications 2017 June 13 3 / 39 Bending Energy: Lipid Vesicles and Sphere Eversions Lipid bilayer membranes Lipid vesicles as models of cell membranes Hydrophobic tails hidden by hydrophilic heads Fluid surface of lipid (surfactant) molecules: free to shear Images from NASA Ames and Vrije Univ. Amsterdam Minimize W (or perhaps RR (H H )2 if sides differ) − 0 John M. Sullivan (TU Berlin) Topology with Biological Applications 2017 June 13 4 / 39 Bending Energy: Lipid Vesicles and Sphere Eversions Physical constraints Fixed volume enclosed Fixed surface area Fixed ∆A = RR H dA John M. Sullivan (TU Berlin) Topology with Biological Applications 2017 June 13 5 / 39 Bending Energy: Lipid Vesicles and Sphere Eversions Toroidal vesicles Studied by Xavier Michalet (now UCLA) Agree with W-minimizing simulations John M. Sullivan (TU Berlin) Topology with Biological Applications 2017 June 13 6 / 39 Bending Energy: Lipid Vesicles and Sphere Eversions Higher-genus vesicles Again studied by Michalet Demonstrate Mobius¨ invariance John M.
    [Show full text]
  • Arxiv:Math/0303034V3 [Math.GT] 16 Feb 2004 Nt-Yeivrat Ntrso Lsia Oooy Otadtaub and Bott the Topology
    NEW PERSPECTIVES ON SELF-LINKING RYAN BUDNEY, JAMES CONANT, KEVIN P. SCANNELL, AND DEV SINHA Abstract. We initiate the study of classical knots through the homotopy class of the nth evaluation map of the knot, which is the induced map on the compactified n-point configuration space. Sending a knot to its nth evaluation map realizes the space of knots as a subspace of what we call the nth mapping space model for knots. We compute the homotopy types of the first three mapping space models, showing that the third model gives rise to an integer-valued invariant. We realize this invariant in two ways, in terms of collinearities of three or four points on the knot, and give some explicit computations. We show this invariant coincides with the second coefficient of the Conway polynomial, thus giving a new geometric definition of the simplest finite-type invariant. Finally, using this geometric definition, we give some new applications of this invariant relating to quadrisecants in the knot and to complexity of polygonal and polynomial realizations of a knot. Contents 1. Introduction 1 2. Spaces of knots and evaluation maps 4 2.1. Compactifications of configuration spaces 4 2.2. The mapping space model 7 3. The homotopy types of the first three mapping space models 7 4. Linking of collinearity manifolds 11 4.1. Definition of ν2 11 4.2. µ2 is an isomorphism 14 5. Examples 15 6. Quadrisecants, finite-type, and geometric consequences 18 6.1. Quadrisecants on long knots 18 6.2. ν2 is of type two. 19 6.3.
    [Show full text]