Notulae to the Italian Flora of Algae, Bryophytes, Fungi and Lichens: 5
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The Lichens' Microbiota, Still a Mystery?
fmicb-12-623839 March 24, 2021 Time: 15:25 # 1 REVIEW published: 30 March 2021 doi: 10.3389/fmicb.2021.623839 The Lichens’ Microbiota, Still a Mystery? Maria Grimm1*, Martin Grube2, Ulf Schiefelbein3, Daniela Zühlke1, Jörg Bernhardt1 and Katharina Riedel1 1 Institute of Microbiology, University Greifswald, Greifswald, Germany, 2 Institute of Plant Sciences, Karl-Franzens-University Graz, Graz, Austria, 3 Botanical Garden, University of Rostock, Rostock, Germany Lichens represent self-supporting symbioses, which occur in a wide range of terrestrial habitats and which contribute significantly to mineral cycling and energy flow at a global scale. Lichens usually grow much slower than higher plants. Nevertheless, lichens can contribute substantially to biomass production. This review focuses on the lichen symbiosis in general and especially on the model species Lobaria pulmonaria L. Hoffm., which is a large foliose lichen that occurs worldwide on tree trunks in undisturbed forests with long ecological continuity. In comparison to many other lichens, L. pulmonaria is less tolerant to desiccation and highly sensitive to air pollution. The name- giving mycobiont (belonging to the Ascomycota), provides a protective layer covering a layer of the green-algal photobiont (Dictyochloropsis reticulata) and interspersed cyanobacterial cell clusters (Nostoc spec.). Recently performed metaproteome analyses Edited by: confirm the partition of functions in lichen partnerships. The ample functional diversity Nathalie Connil, Université de Rouen, France of the mycobiont contrasts the predominant function of the photobiont in production Reviewed by: (and secretion) of energy-rich carbohydrates, and the cyanobiont’s contribution by Dirk Benndorf, nitrogen fixation. In addition, high throughput and state-of-the-art metagenomics and Otto von Guericke University community fingerprinting, metatranscriptomics, and MS-based metaproteomics identify Magdeburg, Germany Guilherme Lanzi Sassaki, the bacterial community present on L. -
Mapping Non-Host Resistance to the Stem Rust Pathogen in an Interspecific Barberry Hybrid Radhika Bartaula1, Arthur T
Bartaula et al. BMC Plant Biology (2019) 19:319 https://doi.org/10.1186/s12870-019-1893-9 RESEARCH ARTICLE Open Access Mapping non-host resistance to the stem rust pathogen in an interspecific barberry hybrid Radhika Bartaula1, Arthur T. O. Melo2, Sarah Kingan3, Yue Jin4 and Iago Hale2* Abstract Background: Non-host resistance (NHR) presents a compelling long-term plant protection strategy for global food security, yet the genetic basis of NHR remains poorly understood. For many diseases, including stem rust of wheat [causal organism Puccinia graminis (Pg)], NHR is largely unexplored due to the inherent challenge of developing a genetically tractable system within which the resistance segregates. The present study turns to the pathogen’salternate host, barberry (Berberis spp.), to overcome this challenge. Results: In this study, an interspecific mapping population derived from a cross between Pg-resistant Berberis thunbergii (Bt)andPg-susceptible B. vulgaris was developed to investigate the Pg-NHR exhibited by Bt. To facilitate QTL analysis and subsequent trait dissection, the first genetic linkage maps for the two parental species were constructed and a chromosome-scale reference genome for Bt was assembled (PacBio + Hi-C). QTL analysis resulted in the identification of a single 13 cM region (~ 5.1 Mbp spanning 13 physical contigs) on the short arm of Bt chromosome 3. Differential gene expression analysis, combined with sequence variation analysis between the two parental species, led to the prioritization of several candidate genes within the QTL region, some of which belong to gene families previously implicated in disease resistance. Conclusions: Foundational genetic and genomic resources developed for Berberis spp. -
Antarctic Bryophyte Research—Current State and Future Directions
Bry. Div. Evo. 043 (1): 221–233 ISSN 2381-9677 (print edition) DIVERSITY & https://www.mapress.com/j/bde BRYOPHYTEEVOLUTION Copyright © 2021 Magnolia Press Article ISSN 2381-9685 (online edition) https://doi.org/10.11646/bde.43.1.16 Antarctic bryophyte research—current state and future directions PAULO E.A.S. CÂMARA1, MicHELine CARVALHO-SILVA1 & MicHAEL STecH2,3 1Departamento de Botânica, Universidade de Brasília, Brazil UnB; �[email protected]; http://orcid.org/0000-0002-3944-996X �[email protected]; https://orcid.org/0000-0002-2389-3804 2Naturalis Biodiversity Center, P.O. Box 9517, 2300 RA Leiden, Netherlands; 3Leiden University, Leiden, Netherlands �[email protected]; https://orcid.org/0000-0001-9804-0120 Abstract Botany is one of the oldest sciences done south of parallel 60 °S, although few professional botanists have dedicated themselves to investigating the Antarctic bryoflora. After the publications of liverwort and moss floras in 2000 and 2008, respectively, new species were described. Currently, the Antarctic bryoflora comprises 28 liverwort and 116 moss species. Furthermore, Antarctic bryology has entered a new phase characterized by the use of molecular tools, in particular DNA sequencing. Although the molecular studies of Antarctic bryophytes have focused exclusively on mosses, molecular data (fingerprinting data and/or DNA sequences) have already been published for 36 % of the Antarctic moss species. In this paper we review the current state of Antarctic bryological research, focusing on molecular studies and conservation, and discuss future questions of Antarctic bryology in the light of global challenges. Keywords: Antarctic flora, conservation, future challenges, molecular phylogenetics, phylogeography Introduction The Antarctic is the most pristine, but also most extreme region on Earth in terms of environmental conditions. -
New Or Interesting Lichens and Lichenicolous Fungi from Belgium, Luxembourg and Northern France
New or interesting lichens and lichenicolous fungi from Belgium, Luxembourg and northern France. X Emmanuël SÉRUSIAUX1, Paul DIEDERICH2, Damien ERTZ3, Maarten BRAND4 & Pieter VAN DEN BOOM5 1 Plant Taxonomy and Conservation Biology Unit, University of Liège, Sart Tilman B22, B-4000 Liège, Belgique ([email protected]) 2 Musée national d’histoire naturelle, 25 rue Munster, L-2160 Luxembourg, Luxembourg ([email protected]) 3 Jardin Botanique National de Belgique, Domaine de Bouchout, B-1860 Meise, Belgium ([email protected]) 4 Klipperwerf 5, NL-2317 DX Leiden, the Netherlands ([email protected]) 5 Arafura 16, NL-5691 JA Son, the Netherlands ([email protected]) Sérusiaux, E., P. Diederich, D. Ertz, M. Brand & P. van den Boom, 2006. New or interesting lichens and lichenicolous fungi from Belgium, Luxembourg and northern France. X. Bul- letin de la Société des naturalistes luxembourgeois 107 : 63-74. Abstract. Review of recent literature and studies on large and mainly recent collections of lichens and lichenicolous fungi led to the addition of 35 taxa to the flora of Belgium, Lux- embourg and northern France: Abrothallus buellianus, Absconditella delutula, Acarospora glaucocarpa var. conspersa, Anema nummularium, Anisomeridium ranunculosporum, Artho- nia epiphyscia, A. punctella, Bacidia adastra, Brodoa atrofusca, Caloplaca britannica, Cer- cidospora macrospora, Chaenotheca laevigata, Collemopsidium foveolatum, C. sublitorale, Coppinsia minutissima, Cyphelium inquinans, Involucropyrenium squamulosum, Lecania fructigena, Lecanora conferta, L. pannonica, L. xanthostoma, Lecidea variegatula, Mica- rea micrococca, Micarea subviridescens, M. vulpinaris, Opegrapha prosodea, Parmotrema stuppeum, Placynthium stenophyllum var. isidiatum, Porpidia striata, Pyrenidium actinellum, Thelopsis rubella, Toninia physaroides, Tremella coppinsii, Tubeufia heterodermiae, Verru- caria acrotella and Vezdaea stipitata. -
Cuivre Bryophytes
Trip Report for: Cuivre River State Park Species Count: 335 Date: Multiple Visits Lincoln County Agency: MODNR Location: Lincoln Hills - Bryophytes Participants: Bryophytes from Natural Resource Inventory Database Bryophyte List from NRIDS and Bruce Schuette Species Name (Synonym) Common Name Family COFC COFW Acarospora unknown Identified only to Genus Acarosporaceae Lichen Acrocordia megalospora a lichen Monoblastiaceae Lichen Amandinea dakotensis a button lichen (crustose) Physiaceae Lichen Amandinea polyspora a button lichen (crustose) Physiaceae Lichen Amandinea punctata a lichen Physiaceae Lichen Amanita citrina Citron Amanita Amanitaceae Fungi Amanita fulva Tawny Gresette Amanitaceae Fungi Amanita vaginata Grisette Amanitaceae Fungi Amblystegium varium common willow moss Amblystegiaceae Moss Anisomeridium biforme a lichen Monoblastiaceae Lichen Anisomeridium polypori a crustose lichen Monoblastiaceae Lichen Anomodon attenuatus common tree apron moss Anomodontaceae Moss Anomodon minor tree apron moss Anomodontaceae Moss Anomodon rostratus velvet tree apron moss Anomodontaceae Moss Armillaria tabescens Ringless Honey Mushroom Tricholomataceae Fungi Arthonia caesia a lichen Arthoniaceae Lichen Arthonia punctiformis a lichen Arthoniaceae Lichen Arthonia rubella a lichen Arthoniaceae Lichen Arthothelium spectabile a lichen Uncertain Lichen Arthothelium taediosum a lichen Uncertain Lichen Aspicilia caesiocinerea a lichen Hymeneliaceae Lichen Aspicilia cinerea a lichen Hymeneliaceae Lichen Aspicilia contorta a lichen Hymeneliaceae Lichen -
Pannariaceae Generic Taxonomy LL Ver. 27.9.2013.Docx
http://www.diva-portal.org Preprint This is the submitted version of a paper published in The Lichenologist. Citation for the original published paper (version of record): Ekman, S. (2014) Extended phylogeny and a revised generic classification of the Pannariaceae (Peltigerales, Ascomycota). The Lichenologist, 46: 627-656 http://dx.doi.org/10.1017/S002428291400019X Access to the published version may require subscription. N.B. When citing this work, cite the original published paper. Permanent link to this version: http://urn.kb.se/resolve?urn=urn:nbn:se:nrm:diva-943 Extended phylogeny and a revised generic classification of the Pannariaceae (Peltigerales, Ascomycota) Stefan EKMAN, Mats WEDIN, Louise LINDBLOM & Per M. JØRGENSEN S. Ekman (corresponding author): Museum of Evolution, Uppsala University, Norbyvägen 16, SE –75236 Uppsala, Sweden. Email: [email protected] M. Wedin: Dept. of Botany, Swedish Museum of Natural History, Box 50007, SE –10405 Stockholm, Sweden. L. Lindblom and P. M. Jørgensen: Dept. of Natural History, University Museum of Bergen, Box 7800, NO –5020 Bergen, Norway. Abstract: We estimated phylogeny in the lichen-forming ascomycete family Pannariaceae. We specifically modelled spatial (across-site) heterogeneity in nucleotide frequencies, as models not incorporating this heterogeneity were found to be inadequate for our data. Model adequacy was measured here as the ability of the model to reconstruct nucleotide diversity per site in the original sequence data. A potential non-orthologue in the internal transcribed spacer region (ITS) of Degelia plumbea was observed. We propose a revised generic classification for the Pannariaceae, accepting 30 genera, based on our phylogeny, previously published phylogenies, as well as morphological and chemical data available. -
New Records of Crustose Teloschistaceae (Lichens, Ascomycota) from the Murmansk Region of Russia
vol. 37, no. 3, pp. 421–434, 2016 doi: 10.1515/popore-2016-0022 New records of crustose Teloschistaceae (lichens, Ascomycota) from the Murmansk region of Russia Ivan FROLOV1* and Liudmila KONOREVA2,3 1 Department of Botany, Faculty of Science, University of South Bohemia, Branišovská 31, České Budějovice, CZ-37005, Czech Republic 2 Laboratory of Flora and Vegetations, The Polar-Alpine Botanical Garden and Institute KSC RAS, Kirovsk, Murmansk region, 184209, Russia 3 Laboratory of Lichenology and Bryology, Komarov Botanical Institute RAS, Professor Popov St. 2, St. Petersburg, 197376, Russia * corresponding author <[email protected]> Abstract: Twenty-three species of crustose Teloschistaceae were collected from the northwest of the Murmansk region of Russia during field trips in 2013 and 2015. Blas- tenia scabrosa is a new combination supported by molecular data. Blastenia scabrosa, Caloplaca fuscorufa and Flavoplaca havaasii are new to Russia. Blastenia scabrosa is also new to the Caucasus Mts and Sweden. Detailed morphological measurements of the Russian specimens of these species are provided. Caloplaca exsecuta, C. grimmiae and C. sorocarpa are new to the Murmansk region. The taxonomic position of C. alcarum is briefly discussed. Key words: Arctic, Rybachy Peninsula, Caloplaca s. lat., Blastenia scabrosa. Introduction Although the Murmansk region is one of the best studied regions of Russia in terms of lichen diversity, there are numerous reports in recent literature of new discoveries there (e.g. Fadeeva et al. 2013; Konoreva 2015; Melechin 2015; Urbanavichus 2015). Several localities in the northwest of the Murmansk region, mainly on the Pechenga Tundra Mountains and the Rybachy Peninsula, were visited in 2013 and 2015. -
Lichen Functional Trait Variation Along an East-West Climatic Gradient in Oregon and Among Habitats in Katmai National Park, Alaska
AN ABSTRACT OF THE THESIS OF Kaleigh Spickerman for the degree of Master of Science in Botany and Plant Pathology presented on June 11, 2015 Title: Lichen Functional Trait Variation Along an East-West Climatic Gradient in Oregon and Among Habitats in Katmai National Park, Alaska Abstract approved: ______________________________________________________ Bruce McCune Functional traits of vascular plants have been an important component of ecological studies for a number of years; however, in more recent times vascular plant ecologists have begun to formalize a set of key traits and universal system of trait measurement. Many recent studies hypothesize global generality of trait patterns, which would allow for comparison among ecosystems and biomes and provide a foundation for general rules and theories, the so-called “Holy Grail” of ecology. However, the majority of these studies focus on functional trait patterns of vascular plants, with a minority examining the patterns of cryptograms such as lichens. Lichens are an important component of many ecosystems due to their contributions to biodiversity and their key ecosystem services, such as contributions to mineral and hydrological cycles and ecosystem food webs. Lichens are also of special interest because of their reliance on atmospheric deposition for nutrients and water, which makes them particularly sensitive to air pollution. Therefore, they are often used as bioindicators of air pollution, climate change, and general ecosystem health. This thesis examines the functional trait patterns of lichens in two contrasting regions with fundamentally different kinds of data. To better understand the patterns of lichen functional traits, we examined reproductive, morphological, and chemical trait variation along precipitation and temperature gradients in Oregon. -
H. Thorsten Lumbsch VP, Science & Education the Field Museum 1400
H. Thorsten Lumbsch VP, Science & Education The Field Museum 1400 S. Lake Shore Drive Chicago, Illinois 60605 USA Tel: 1-312-665-7881 E-mail: [email protected] Research interests Evolution and Systematics of Fungi Biogeography and Diversification Rates of Fungi Species delimitation Diversity of lichen-forming fungi Professional Experience Since 2017 Vice President, Science & Education, The Field Museum, Chicago. USA 2014-2017 Director, Integrative Research Center, Science & Education, The Field Museum, Chicago, USA. Since 2014 Curator, Integrative Research Center, Science & Education, The Field Museum, Chicago, USA. 2013-2014 Associate Director, Integrative Research Center, Science & Education, The Field Museum, Chicago, USA. 2009-2013 Chair, Dept. of Botany, The Field Museum, Chicago, USA. Since 2011 MacArthur Associate Curator, Dept. of Botany, The Field Museum, Chicago, USA. 2006-2014 Associate Curator, Dept. of Botany, The Field Museum, Chicago, USA. 2005-2009 Head of Cryptogams, Dept. of Botany, The Field Museum, Chicago, USA. Since 2004 Member, Committee on Evolutionary Biology, University of Chicago. Courses: BIOS 430 Evolution (UIC), BIOS 23410 Complex Interactions: Coevolution, Parasites, Mutualists, and Cheaters (U of C) Reading group: Phylogenetic methods. 2003-2006 Assistant Curator, Dept. of Botany, The Field Museum, Chicago, USA. 1998-2003 Privatdozent (Assistant Professor), Botanical Institute, University – GHS - Essen. Lectures: General Botany, Evolution of lower plants, Photosynthesis, Courses: Cryptogams, Biology -
Steciana Doi:10.12657/Steciana.020.008 ISSN 1689-653X
2016, Vol. 20(2): 63–72 Steciana doi:10.12657/steciana.020.008 www.up.poznan.pl/steciana ISSN 1689-653X LICHENS AS INDICATORS OF AIR POLLUTION IN ŁOMŻA ANNA MATWIEJUK, PAULINA CHOJNOWSKA A. Matwiejuk, P. Chojnowska, Institute of Biology, University of Bialystok, Konstanty Ciołkowski 1 J, 15-245 Białystok, Poland, e-mail: [email protected], [email protected] (Received: December 9, 2015. Accepted: March 29, 2016) ABSTRACT. Research using lichens as bioindicators of air pollution has been conducted in the city of Łomża. The presence of indicator species of epiphytic and epilithic lichens has been analysed. A 4-point lichen scale has been developed for the test area, on the basis of which four lichenoindication zones have been deter- mined. The least favourable conditions for lichen growth have been recorded in the city center. Green areas and open spaces are the areas with the most favourable impact of the urban environment on lichen biota. KEY WORDS: air pollution, biodiversity, lichens, urban environment INTRODUCTION terised by high resistance to factors such as extreme temperatures, lack of water and short growing peri- Lichens (lichenized fungi, Fungi lichenisati) are symbi- od, yet highest sensitivity to air pollution (Fałtyno otic organisms, created in most cases by an associa- wicz 1995). For more than 140 years lichens have tion of green algae (Chlorophyta) or blue-green algae been considered one of the best bioindicators of air (Cyanobacteria) and fungi, especially ascomycetes pollution (NYLANDER 1866). (Ascomycota) (NASH 1996, PURVIS 2000). They are Areas with particularly heavy impact of civili- mushrooms with a specific nutritional strategy, in- zation on the environment are cities. -
BLS Bulletin 111 Winter 2012.Pdf
1 BRITISH LICHEN SOCIETY OFFICERS AND CONTACTS 2012 PRESIDENT B.P. Hilton, Beauregard, 5 Alscott Gardens, Alverdiscott, Barnstaple, Devon EX31 3QJ; e-mail [email protected] VICE-PRESIDENT J. Simkin, 41 North Road, Ponteland, Newcastle upon Tyne NE20 9UN, email [email protected] SECRETARY C. Ellis, Royal Botanic Garden, 20A Inverleith Row, Edinburgh EH3 5LR; email [email protected] TREASURER J.F. Skinner, 28 Parkanaur Avenue, Southend-on-Sea, Essex SS1 3HY, email [email protected] ASSISTANT TREASURER AND MEMBERSHIP SECRETARY H. Döring, Mycology Section, Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3AB, email [email protected] REGIONAL TREASURER (Americas) J.W. Hinds, 254 Forest Avenue, Orono, Maine 04473-3202, USA; email [email protected]. CHAIR OF THE DATA COMMITTEE D.J. Hill, Yew Tree Cottage, Yew Tree Lane, Compton Martin, Bristol BS40 6JS, email [email protected] MAPPING RECORDER AND ARCHIVIST M.R.D. Seaward, Department of Archaeological, Geographical & Environmental Sciences, University of Bradford, West Yorkshire BD7 1DP, email [email protected] DATA MANAGER J. Simkin, 41 North Road, Ponteland, Newcastle upon Tyne NE20 9UN, email [email protected] SENIOR EDITOR (LICHENOLOGIST) P.D. Crittenden, School of Life Science, The University, Nottingham NG7 2RD, email [email protected] BULLETIN EDITOR P.F. Cannon, CABI and Royal Botanic Gardens Kew; postal address Royal Botanic Gardens, Kew, Richmond, Surrey TW9 3AB, email [email protected] CHAIR OF CONSERVATION COMMITTEE & CONSERVATION OFFICER B.W. Edwards, DERC, Library Headquarters, Colliton Park, Dorchester, Dorset DT1 1XJ, email [email protected] CHAIR OF THE EDUCATION AND PROMOTION COMMITTEE: S. -
Mantar Dergisi
11 6845 - Volume: 20 Issue:1 JOURNAL - E ISSN:2147 - April 20 e TURKEY - KONYA - FUNGUS Research Center JOURNAL OF OF JOURNAL Selçuk Selçuk University Mushroom Application and Selçuk Üniversitesi Mantarcılık Uygulama ve Araştırma Merkezi KONYA-TÜRKİYE MANTAR DERGİSİ E-DERGİ/ e-ISSN:2147-6845 Nisan 2020 Cilt:11 Sayı:1 e-ISSN 2147-6845 Nisan 2020 / Cilt:11/ Sayı:1 April 2020 / Volume:11 / Issue:1 SELÇUK ÜNİVERSİTESİ MANTARCILIK UYGULAMA VE ARAŞTIRMA MERKEZİ MÜDÜRLÜĞÜ ADINA SAHİBİ PROF.DR. GIYASETTİN KAŞIK YAZI İŞLERİ MÜDÜRÜ DR. ÖĞR. ÜYESİ SİNAN ALKAN Haberleşme/Correspondence S.Ü. Mantarcılık Uygulama ve Araştırma Merkezi Müdürlüğü Alaaddin Keykubat Yerleşkesi, Fen Fakültesi B Blok, Zemin Kat-42079/Selçuklu-KONYA Tel:(+90)0 332 2233998/ Fax: (+90)0 332 241 24 99 Web: http://mantarcilik.selcuk.edu.tr http://dergipark.gov.tr/mantar E-Posta:[email protected] Yayın Tarihi/Publication Date 27/04/2020 i e-ISSN 2147-6845 Nisan 2020 / Cilt:11/ Sayı:1 / / April 2020 Volume:11 Issue:1 EDİTÖRLER KURULU / EDITORIAL BOARD Prof.Dr. Abdullah KAYA (Karamanoğlu Mehmetbey Üniv.-Karaman) Prof.Dr. Abdulnasır YILDIZ (Dicle Üniv.-Diyarbakır) Prof.Dr. Abdurrahman Usame TAMER (Celal Bayar Üniv.-Manisa) Prof.Dr. Ahmet ASAN (Trakya Üniv.-Edirne) Prof.Dr. Ali ARSLAN (Yüzüncü Yıl Üniv.-Van) Prof.Dr. Aysun PEKŞEN (19 Mayıs Üniv.-Samsun) Prof.Dr. A.Dilek AZAZ (Balıkesir Üniv.-Balıkesir) Prof.Dr. Ayşen ÖZDEMİR TÜRK (Anadolu Üniv.- Eskişehir) Prof.Dr. Beyza ENER (Uludağ Üniv.Bursa) Prof.Dr. Cvetomir M. DENCHEV (Bulgarian Academy of Sciences, Bulgaristan) Prof.Dr. Celaleddin ÖZTÜRK (Selçuk Üniv.-Konya) Prof.Dr. Ertuğrul SESLİ (Trabzon Üniv.-Trabzon) Prof.Dr.