Exposure-Related Effects of Formulated Pseudomonas Fluorescens Strain CL145A to Glochidia from Seven Unionid Mussel Species
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Gene Family Amplification Facilitates Adaptation in Freshwater Unionid
Gene family amplification facilitates adaptation in freshwater unionid bivalve Megalonaias nervosa Rebekah L. Rogers1∗, Stephanie L. Grizzard1;2, James E. Titus-McQuillan1, Katherine Bockrath3;4 Sagar Patel1;5;6, John P. Wares3;7, Jeffrey T Garner8, Cathy C. Moore1 Author Affiliations: 1. Department of Bioinformatics and Genomics, University of North Carolina, Charlotte, NC 2. Department of Biological Sciences, Old Dominion University, Norfolk, VA 3. Department of Genetics, University of Georgia, Athens, GA 4. U.S. Fish and Wildlife Service, Midwest Fisheries Center Whitney Genetics Lab, Onalaska, WI 5. Department of Biology, Saint Louis University, St. Louis, MO 6. Donald Danforth Plant Science Center, St. Louis, MO 7. Odum School of Ecology, University of Georgia, Athens, GA 8. Division of Wildlife and Freshwater Fisheries, Alabama Department of Conservation and Natural Resources, Florence, AL *Corresponding author: Department of Bioinformatics and Genomics, University of North Carolina, Charlotte, NC. [email protected] Keywords: Unionidae, M. nervosa, Evolutionary genomics, gene family expansion, arXiv:2008.00131v2 [q-bio.GN] 16 Nov 2020 transposable element evolution, Cytochrome P450, Population genomics, reverse ecological genetics Short Title: Gene family expansion in Megalonaias nervosa 1 Abstract Freshwater unionid bivalves currently face severe anthropogenic challenges. Over 70% of species in the United States are threatened, endangered or extinct due to pollution, damming of waterways, and overfishing. These species are notable for their unusual life history strategy, parasite-host coevolution, and biparental mitochondria inheritance. Among this clade, the washboard mussel Megalonaias nervosa is one species that remains prevalent across the Southeastern United States, with robust population sizes. We have created a reference genome for M. -
Atlas of the Freshwater Mussels (Unionidae)
1 Atlas of the Freshwater Mussels (Unionidae) (Class Bivalvia: Order Unionoida) Recorded at the Old Woman Creek National Estuarine Research Reserve & State Nature Preserve, Ohio and surrounding watersheds by Robert A. Krebs Department of Biological, Geological and Environmental Sciences Cleveland State University Cleveland, Ohio, USA 44115 September 2015 (Revised from 2009) 2 Atlas of the Freshwater Mussels (Unionidae) (Class Bivalvia: Order Unionoida) Recorded at the Old Woman Creek National Estuarine Research Reserve & State Nature Preserve, Ohio, and surrounding watersheds Acknowledgements I thank Dr. David Klarer for providing the stimulus for this project and Kristin Arend for a thorough review of the present revision. The Old Woman Creek National Estuarine Research Reserve provided housing and some equipment for local surveys while research support was provided by a Research Experiences for Undergraduates award from NSF (DBI 0243878) to B. Michael Walton, by an NOAA fellowship (NA07NOS4200018), and by an EFFRD award from Cleveland State University. Numerous students were instrumental in different aspects of the surveys: Mark Lyons, Trevor Prescott, Erin Steiner, Cal Borden, Louie Rundo, and John Hook. Specimens were collected under Ohio Scientific Collecting Permits 194 (2006), 141 (2007), and 11-101 (2008). The Old Woman Creek National Estuarine Research Reserve in Ohio is part of the National Estuarine Research Reserve System (NERRS), established by section 315 of the Coastal Zone Management Act, as amended. Additional information on these preserves and programs is available from the Estuarine Reserves Division, Office for Coastal Management, National Oceanic and Atmospheric Administration, U. S. Department of Commerce, 1305 East West Highway, Silver Spring, MD 20910. -
Conservation Status Assessment and a New Method for Establishing Conservation Priorities for Freshwater Mussels
Received: 8 March 2018 Revised: 9 November 2019 Accepted: 17 December 2019 DOI: 10.1002/aqc.3298 RESEARCH ARTICLE Conservation status assessment and a new method for establishing conservation priorities for freshwater mussels (Bivalvia: Unionida) in the middle and lower reaches of the Yangtze River drainage Xiongjun Liu1,2 | Xue Yang3 | David T. Zanatta4 | Manuel Lopes-Lima5 | Arthur E. Bogan6 | Alexandra Zieritz7,8 | Shan Ouyang3 | Xiaoping Wu1,2,3 1Key Laboratory of Poyang Lake Environment and Resource Utilization, School of Resources Abstract Environmental and Chemical Engineering, 1. The freshwater mussel (Unionida) fauna of the Yangtze River is among the most Nanchang University, Nanchang, People's Republic of China diverse on Earth. In recent decades, human activities have caused habitat degra- 2School of Resources Environmental & dation in the river, and previous studies estimated that up to 80% of the mussel Chemical Engineering, Nanchang University, species in the Yangtze River are Threatened or Near Threatened with extinction. Nanchang, People's Republic of China 3School of Life Sciences, Nanchang University, However, a comprehensive and systematic evaluation of the conservation status Nanchang, People's Republic of China of this fauna has yet to be completed. 4 Central Michigan University, Institute for 2. This study evaluated the conservation status of the 69 recognized freshwater Great Lakes Research, Mount Pleasant, MI mussel species in the middle and lower reaches of the Yangtze River, using the 5CIBIO/InBIO – Research Center -
Population Structure of Selected Freshwater Mussel (Bivalvia: Unionoida) Beds in the Little River, Pond Creek National Wildlife Refuge – Phase I
Final Report U.S. Department of the Interior – Fish and Wildlife Service Arkansas Ecological Services Field Office POPULATION STRUCTURE OF SELECTED FRESHWATER MUSSEL (BIVALVIA: UNIONOIDA) BEDS IN THE LITTLE RIVER, POND CREEK NATIONAL WILDLIFE REFUGE – PHASE I Principal Investigator: Chris L. Davidson U.S. Fish and Wildlife Service Arkansas Ecological Services Field Office Conway, AR 72032 [email protected] April 11, 2017 INTRODUCTION The Little River in southeastern Oklahoma and southwestern Arkansas has a diverse mussel assemblage, including the federally protected Ouachita Rock Pocketbook (Arcidens wheeleri), Rabbitsfoot (Quadrula cylindrica cylindrica), Winged Mapleleaf (Quadrula fragosa), and Pink Mucket (Lampsilis abrupta). Several researchers over the past several decades have sampled mussels in much of the river (Ecosearch 1987; Harris and Gordon 1987; Galbraith et al. 2005, Vaughn 1994, 2012; Vaughn et al. 1995; Vaughn and Taylor 1999; Seagraves 2006; URS 2007; Arkansas Game and Fish Commission (AGFC) Mussel Database 2014; Galbraith and Vaughn 2011; Atkinson et al. 2012, 2014; Allen et al. 2013; Davidson et al. 2014). Mussel declines in the Little River largely have been attributed to impoundments (Vaughn and Taylor 1999; Galbraith and Vaughn 2011; Vaughn et al. 2015; Gates et al. 2015), drought (Atkinson et al. 2014; Vaughn et al. 2015), and degraded water quality from point source effluents (Ecosearch 1987). The factors limiting recruitment also include threats affecting their fish hosts (Haag and Warren 1997; Vaughn and Taylor 2000; Irmscher and Vaughn 2015). Freshwater mussel species richness and community composition are influenced by numerous variables affecting habitat (e.g., land use, land cover, hydrology, etc.) at differing spatial scales (e.g., local to catchment) (Atkinson et al. -
WALKERANA VOLUME 15 NUMBER 1 MARCH 2012 Pages 1-10 Epioblasma Capsaeformis (Bivalvia, Unionidae.) How a State-Wide Stream Survey Can Aid in Jess W
WALKERANA VOLUME 15 NUMBER 1 MARCH 2012 Pages 1-10 Epioblasma capsaeformis (Bivalvia, Unionidae.) How a state-wide stream survey can aid in Jess W. Jones, Richard J. Neves understanding freshwater mussel (Bivalvia: & Eric M. Hallerman Unionidae) ecology: examples of utility and limitations from Maryland. Pages 45-59 Matthew J. Ashton A qualitative freshwater mussel (Bivalvia: Unionidae) survey of the Lamine and Pages 11-16 Blackwater River Basins, Missouri. Reproductive biology and host fishes of four Stephen E. McMurray, J. Scott Faiman unionids from the Lake Pontchartrain Basin, & Sue A. Bruenderman Louisiana, U.S.A. Wesley M. Daniel & Kenneth M. Brown Pages 60-68 Assessing accumulation and sublethal Pages 17-26 effects of lead in a unionid mussel. Recent monitoring of the freshwater mollusks Shad Mosher, W. Gregory Cope, Frank X. of Kinniconick Creek, Kentucky, with comments Weber, Thomas J. Kwak & Damian Shea on potential threats. Ryan Evans Pages 69-82 Thermal tolerances of freshwater mussels Pages 27-44 and their host fishes: species interactions Population performance criteria to evaluate in a changing climate. reintroduction and recovery of two endangered Tamara J. Pandolfo, Thomas J. Kwak & mussel species, Epioblasma brevidens and W. Gregory Cope WALKERANA, 35(1): Pages 1-10, 2012 ©Freshwater Mollusk Conservation Society (FMCS) WALKERANA The Journal of the HOW A STATEWIDE STREAM SURVEY CAN AID IN Freshwater Mollusk Conservation Society UNDERSTANDING FRESHWATER MUSSEL (BIVALVIA: ©2010 UNIONIDAE) ECOLOGY: EXAMPLES OF UTILITY AND LIMITATIONS FROM MARYLAND Editorial Board Matthew J. Ashton CO-EDITORS Maryland Department of Natural Resources, Monitoring and Non-Tidal Assessment Division, Gregory Cope, North Carolina State University 580 Taylor Ave., C-2, Annapolis, MD 21401 U.S.A. -
The Crown Pearl: a Draft Genome Assembly of the European Freshwater Pearl Mussel Margaritifera Margaritifera (Linnaeus, 1758)
bioRxiv preprint doi: https://doi.org/10.1101/2020.12.06.413450; this version posted December 6, 2020. The copyright holder for this preprint (which was not certified by peer review) is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under aCC-BY-NC-ND 4.0 International license. The Crown Pearl: a draft genome assembly of the European freshwater pearl mussel Margaritifera margaritifera (Linnaeus, 1758) André Gomes-dos-Santos1,2*, Manuel Lopes-Lima1,3,4*, André M. Machado1, António Marcos Ramos5,15, Ana Usié5,15, Ivan N. Bolotov6, Ilya V. Vikhrev6, Sophie Breton7, L. Filipe C. Castro1,2, Rute R. da Fonseca8, Juergen Geist9, Martin E. Österling10, Vincent Prié11, Amílcar Teixeira12, Han Ming Gan13, Oleg Simakov14, Elsa Froufe1* 1 CIIMAR/CIMAR — Interdisciplinary Centre of Marine and Environmental Research, University of Porto, Terminal de Cruzeiros do Porto de Leixões, Avenida General Norton de Matos, S/N, P 4450-208 Matosinhos, Portugal; 2 Department of Biology, Faculty of Sciences, University of Porto, Rua do Campo Alegre 1021/1055, 4169-007 Porto, Portugal; 3 CIBIO/InBIO - Research Center in Biodiversity and Genetic Resources, Universidade do Porto, Campus Agrário de Vairão, Rua Padre Armando Quintas, 4485-661 Vairão, Portugal; 4 IUCN SSC Mollusc Specialist Group, c/o IUCN, David Attenborough Building, Pembroke St., Cambridge, England; 5 Centro de Biotecnologia Agrícola e Agro-alimentar do Alentejo (CEBAL) / Instituto Politécnico de Beja (IPBeja), Beja 7801-908 Beja, Portugal; -
Volume 21 Number 1 April 2018
FRESHWATER MOLLUSK BIOLOGY AND CONSERVATION THE JOURNAL OF THE FRESHWATER MOLLUSK CONSERVATION SOCIETY VOLUME 21 NUMBER 1 APRIL 2018 Pages 1-18 Pages 19-27 Freshwater Mussels (Bivalvia: Unionida) A Survey of the Freshwater Mussels of Vietnam: Diversity, Distribution, and (Mollusca: Bivalvia: Unionida) of the Conservation Status Niangua River Basin, Missouri Van Tu Do, Le Quang Tuan, and Stephen E. McMurray, Joshua T. Arthur E. Boga Hundley, and J. Scott Faiman Freshwater Mollusk Biology and Conservation 21:1–18, 2018 Ó Freshwater Mollusk Conservation Society 2018 REGULAR ARTICLE FRESHWATER MUSSELS (BIVALVIA: UNIONIDA) OF VIETNAM: DIVERSITY, DISTRIBUTION, AND CONSERVATION STATUS Van Tu Do1, Le Quang Tuan1, and Arthur E. Bogan2* 1 Institute of Ecology and Biological Resources (IEBR), Vietnam Academy of Science and Technology, 18 Hoang Quoc Viet, Nghia Do, Cau Giay, Ha Noi, Vietnam, [email protected]; [email protected] 2 North Carolina Museum of Natural Sciences, 11 West Jones Street, Raleigh, NC 27601 USA ABSTRACT Vietnam has the second highest diversity of freshwater mussels (Unionida) in Asia after China. The purpose of this paper is to compile an up-to-date list of the modern unionid fauna of Vietnam and its current conservation status. Unfortunately, there has been relatively little research on this fauna in Vietnam. Fifty-nine species of Unionida have been recorded from Vietnam based on literature, museum records, and our fieldwork. Fifty were assessed in the International Union for Conservation of Nature (IUCN) Red List 2016 in the IUCN categories of Critically Endangered (four species, 6.8%), Endangered (seven species, 12%), Vulnerable (one species, 1.7%), Near Threatened (two species, 3.4%), Least Concern (23 species, 39%), Data Deficient (11 species, 18.6%), and Not Evaluated (11 species, 18.6%). -
ABSTRACT BUCZEK, SEAN B. Freshwater
ABSTRACT BUCZEK, SEAN B. Freshwater Mussel Sensitivity to Polyacrylamide, Sediment, and Turbidity (Under the direction of W. Gregory Cope and Richard A. McLaughlin). Human activities have significant impacts on aquatic ecosystems and the organisms that occupy them. Anthropogenic activities cause environmental degradation by altering land-cover and leading to increased runoff, soil erosion, and reduced biodiversity. Polyacrylamide (PAM) has become an effective chemical tool for mitigating some of the adverse impacts of erosion and suspended sediment on aquatic ecosystems. However, little is known about the effects of sediment and turbidity on many freshwater organisms, and prior to this study, no information existed on the toxicity of sediment, turbidity, and PAM compounds to native freshwater mussels (family Unionidae), one of the most imperiled faunal groups globally. To characterize the risk of both PAM and environmentally relevant sediment exposure to freshwater mussels, acute toxicity tests were conducted following standard guidelines for the early life stages (glochidia larvae and juveniles) of freshwater mussels. Toxicity of 5 different anionic PAM compounds and 1 non-ionic compound was evaluated for juveniles (test duration 96-h) and glochidia (test duration 24-h) of three freshwater mussel species Lampsilis cariosa, Alasmidonta raveneliana, and Megalonaias nervosa. The mussels were exposed at PAM concentrations of 5, 50, 100, 200, 500, and 1000 mg/L and assessed for survival and viability. We found that median lethal concentrations (LC50) of PAM ranged from 412 to greater than 1000 mg/L for glochidia and from 129 to over 1000 mg/L for juveniles. All LC50s were orders of magnitude greater (2– 3) than concentrations typically recommended for turbidity control in the field (1–5 mg/L). -
Conservation Status Assessment and a New Method for Establishing Conservation Priorities for Freshwater Mussels
1 Conservation status assessment and a new method for establishing 2 conservation priorities for freshwater mussels (Bivalvia: Unionida) in the 3 middle and lower reaches of the Yangtze River drainage 4 XIONGJUN LIUa,b, XUE YANGc, DAVID T. ZANATTAd, MANUEL LOPES-LIMAe, 5 ARTHUR E. BOGANf, ALEXANDRA ZIERITZg,h, SHAN OUYANGc, XIAOPING WUa,b,c* 6 a Key Laboratory of Poyang Lake Environment and Resource Utilization, Ministry of 7 Education, School of Resources Environmental and Chemical Engineering, Nanchang 8 University, Nanchang 330031, China 9 b School of Resources Environmental & Chemical Engineering, Nanchang University, 10 Nanchang 330031, People’s Republic of China 11 c School of Life Sciences, Nanchang University, Nanchang 330031, People’s Republic of 12 China 13 d Central Michigan University, Institute for Great Lakes Research, Biology Department, 14 Mount Pleasant, MI 48859, USA 15 e CIBIO/InBIO – Research Center in Biodiversity and Genetic Resources, University of 16 Porto, Campus Agrário de Vairão, Vairão, Portugal. 17 f North Carolina Museum of Natural Sciences, 11 west Jones St., Raleigh, NC 27601, USA 18 g School of Environmental and Geographical Sciences, Faculty of Science, University of 19 Nottingham Malaysia Campus, Jalan Broga, 43500 Semenyih, Malaysia 20 hSchool of Geography, University of Nottingham, University Park, NG7 2RD Nottingham, 21 UK 22 *Corresponding Author: 1 23 E-mail: [email protected] 24 2 25 Abstract: 26 1. The freshwater mussel (Unionida) fauna of the Yangtze River is among the most 27 diverse on Earth. In recent decades, human activities have caused habitat degradation 28 in the river, and previous studies estimated that up to 80% of the Yangtze River’s 29 mussel species are threatened or Near Threatened with extinction. -
A Revised List of the Freshwater Mussels (Mollusca: Bivalvia: Unionida) of the United States and Canada
Freshwater Mollusk Biology and Conservation 20:33–58, 2017 Ó Freshwater Mollusk Conservation Society 2017 REGULAR ARTICLE A REVISED LIST OF THE FRESHWATER MUSSELS (MOLLUSCA: BIVALVIA: UNIONIDA) OF THE UNITED STATES AND CANADA James D. Williams1*, Arthur E. Bogan2, Robert S. Butler3,4,KevinS.Cummings5, Jeffrey T. Garner6,JohnL.Harris7,NathanA.Johnson8, and G. Thomas Watters9 1 Florida Museum of Natural History, Museum Road and Newell Drive, Gainesville, FL 32611 USA 2 North Carolina Museum of Natural Sciences, MSC 1626, Raleigh, NC 27699 USA 3 U.S. Fish and Wildlife Service, 212 Mills Gap Road, Asheville, NC 28803 USA 4 Retired. 5 Illinois Natural History Survey, 607 East Peabody Drive, Champaign, IL 61820 USA 6 Alabama Division of Wildlife and Freshwater Fisheries, 350 County Road 275, Florence, AL 35633 USA 7 Department of Biological Sciences, Arkansas State University, State University, AR 71753 USA 8 U.S. Geological Survey, Wetland and Aquatic Research Center, 7920 NW 71st Street, Gainesville, FL 32653 USA 9 Museum of Biological Diversity, The Ohio State University, 1315 Kinnear Road, Columbus, OH 43212 USA ABSTRACT We present a revised list of freshwater mussels (order Unionida, families Margaritiferidae and Unionidae) of the United States and Canada, incorporating changes in nomenclature and systematic taxonomy since publication of the most recent checklist in 1998. We recognize a total of 298 species in 55 genera in the families Margaritiferidae (one genus, five species) and Unionidae (54 genera, 293 species). We propose one change in the Margaritiferidae: the placement of the formerly monotypic genus Cumberlandia in the synonymy of Margaritifera. In the Unionidae, we recognize three new genera, elevate four genera from synonymy, and place three previously recognized genera in synonymy. -
Washboard Megalonaias Nervosa ILLINOIS RANGE Shell
washboard Megalonaias nervosa Kingdom: Animalia FEATURES Phylum: Mollusca The washboard mussel has a large, dark, thick, Class: Bivalvia heavy shell with "V"-shaped ridges in the front and Order: Unionoida large folds on the sides and back. The anterior end of the shell is rounded, and the posterior end of the Family: Unionidae shell is squared. The inside of the shell is white, ILLINOIS STATUS sometimes with purple or rust-colored blotches. This mussel may grow to 11 inches in length. common, native © Robert E. Warren BEHAVIORS The washboard mussel lives in large rivers that have a good current. Sometimes it is found in medium- sized streams that have a mud, sand or gravel bottom. The washboard mussel often lives for more than 10 years, and some individuals may live for more than 100 years. The sexes are separate. The male releases sperm into the water. The female draws sperm in through the incurrent siphon, along with water and other particles. Eggs are fertilized internally. The fertilized eggs develop into an intermediate larval stage called glochidia. Glochidia are stored in the female's gills, giving them a safe place to develop and providing plenty of oxygen. In the spring or summer, glochidia are released from the female into the water, where they begin their shell parasitic stage. Glochidia attach to a fish and form a cyst. Within the cyst, the larva transforms into the ILLINOIS RANGE adult form, a process that may take from one to 25 weeks depending on the host, water temperature and place of attachment. It breaks free of the cyst and drops to the bottom where it begins its adult life, if conditions are favorable. -
The Wide Distribution of the Same Species, and of Closely Allied Species of Freshwater Shells Must Have Surprised Every One Who Has Attended to the Subject.”
“The wide distribution of the same species, and of closely allied species of freshwater shells must have surprised every one who has attended to the subject.” - C. Darwin, 1882. Nature. 26: 529-530. Exploring Levels of Genetic Variation in the Freshwater Mussel Genus Villosa (Bivalvia Unionidae) at Different Spatial and Systematic Scales: Implications for Biogeography, Taxonomy, and Conservation Dissertation Presented in Partial Fulfillment of the Requirements for the Degree Doctor of Philosophy in the Graduate School of The Ohio State University By Kody F. Kuehnl, B.S., M.S. ***** The Ohio State University 2009 Dissertation Committee: Approved by Professor Marymegan Daly, Co-Advisor Professor G. Thomas Watters, Co-Advisor _________________________________ Professor H. Lisle Gibbs Advisor Graduate Program in Evolution, Professor Elizabeth A. Marschall Ecology, and Organismal Biology Copyright by Kody F. Kuehnl 2009 Abstract Freshwater mussels (Family Unionidae) are one of the most imperiled groups of animals in North America with approximately 75% of the currently recognized species listed by federal or states as endangered, threatened or species of concern. Despite this designation, conservation of freshwater mussels has been extremely difficult being limited by an inadequate knowledge of even the most basic principles of biology (e.g. life history, reproductive biology, ecology, habitat requirements, etc). Two of these that continue to pose challenges to the conservation of this important group of animals include; identification of 1) taxonomic units appropriate for conservation, and 2) criteria useful for the establishment or re-establishment of populations of freshwater mussels that are endangered, threatened, or species of concern. To address issues associated with the identification of freshwater mussels we employed a modern phylogenetic approach using an enigmatic and important group of unionids (Villosa) in order to assess ambiguities in taxonomic position and delineate species boundaries.