Sodium Dysregulation Coupled with Calcium Entry Leads to Muscular
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Microanatomy of Muscles
Microanatomy of Muscles Anatomy & Physiology Class Three Main Muscle Types Objectives: By the end of this presentation you will have the information to: 1. Describe the 3 main types of muscles. 2. Detail the functions of the muscle system. 3. Correctly label the parts of a myocyte (muscle cell) 4. Identify the levels of organization in a skeletal muscle from organ to myosin. 5. Explain how a muscle contracts utilizing the correct terminology of the sliding filament theory. 6. Contrast and compare cardiac and smooth muscle with skeletal muscle. Major Functions: Muscle System 1. Moving the skeletal system and posture. 2. Passing food through the digestive system & constriction of other internal organs. 3. Production of body heat. 4. Pumping the blood throughout the body. 5. Communication - writing and verbal Specialized Cells (Myocytes) ~ Contractile Cells Can shorten along one or more planes because of specialized cell membrane (sarcolemma) and specialized cytoskeleton. Specialized Structures found in Myocytes Sarcolemma: The cell membrane of a muscle cell Transverse tubule: a tubular invagination of the sarcolemma of skeletal or cardiac muscle fibers that surrounds myofibrils; involved in transmitting the action potential from the sarcolemma to the interior of the myofibril. Sarcoplasmic Reticulum: The special type of smooth endoplasmic Myofibrils: reticulum found in smooth and a contractile fibril of skeletal muscle, composed striated muscle fibers whose function mainly of actin and myosin is to store and release calcium ions. Multiple Nuclei (skeletal) & many mitochondria Skeletal Muscle - Microscopic Anatomy A whole skeletal muscle (such as the biceps brachii) is considered an organ of the muscular system. Each organ consists of skeletal muscle tissue, connective tissue, nerve tissue, and blood or vascular tissue. -
Engineering of the Myosin-I Nucleotide-Binding
THE JOURNAL OF BIOLOGICAL CHEMISTRY Vol. 274, No. 44, Issue of October 29, pp. 31373–31381, 1999 © 1999 by The American Society for Biochemistry and Molecular Biology, Inc. Printed in U.S.A. Engineering of the Myosin-Ib Nucleotide-binding Pocket to Create Selective Sensitivity to N6-modified ADP Analogs* (Received for publication, April 30, 1999, and in revised form, July 21, 1999) Peter G. Gillespie‡§¶, Susan K. H. Gillespie‡i, John A. Mercer**, Kavita Shah‡‡, and Kevan M. Shokat‡‡ §§ From the Departments of ‡Physiology and §Neuroscience, The Johns Hopkins University, Baltimore, Maryland 21205, **McLaughlin Research Institute, Great Falls, Montana 59405, and the ‡‡Departments of Chemistry and Molecular Biology, Princeton University, Princeton, New Jersey 08544 Distinguishing the cellular functions carried out by and amplifies small movements within the head, and diverse enzymes of highly similar structure would be simplified tail domains that couple myosin molecules to other cellular by the availability of isozyme-selective inhibitors. To structures (2). determine roles played by individual members of the Although roles have been identified for conventional myosin large myosin superfamily, we designed a mutation in isozymes (the myosin-II class), elucidating cellular functions myosin’s nucleotide-binding pocket that permits bind- for unconventional myosin isozymes has been notably difficult. 6 ing of adenine nucleotides modified with bulky N sub- Cells may express a dozen or more myosin isozymes simulta- stituents. Introduction of this mutation, Y61G in rat my- neously (5, 6), and many of these isozymes have similar biochem- osin-Ib, did not alter the enzyme’s affinity for ATP or ical properties. -
Rho Kinase Proteins—Pleiotropic Modulators of Cell Survival and Apoptosis
ANTICANCER RESEARCH 31: 3645-3658 (2011) Review Rho Kinase Proteins—Pleiotropic Modulators of Cell Survival and Apoptosis CATHARINE A. STREET1 and BRAD A. BRYAN2 1Ghosh Science and Technology Center, Department of Biology, Worcester State University, Worcester, MA, U.S.A.; 2Center of Excellence in Cancer Research, Department of Biomedical Sciences, Paul L. Foster School of Medicine, Texas Tech University Health Sciences Center, El Paso, TX, U.S.A. Abstract. Rho kinase (ROCK) proteins are Rho-GTPase regulators of actin cytoskeletal dynamics, and therefore activated serine/threonine kinases that function as modulators control cell migration and motility (1). Specifically, ROCK of actin-myosin cytoskeletal dynamics via regulation of Lin11, proteins promote the formation of stress fibers and focal Isl-1 & Mec-3 domain (LIM) kinase, myosin light chain (MLC), adhesions (Figure 1), but have also been implicated in and MLC phosphatase. A strong correlation between diverse processes such as cell junction integrity and cell cytoskeletal rearrangements and tumor cell invasion, metastasis, cycle control (2). ROCK activity is responsible for and deregulated microenvironment interaction has been stabilization of actin microfilaments as well as promoting reported in the literature, and the utilization of pharmacological cellular contraction and cell substratum contact. ROCK inhibitors of ROCK signaling for the treatment of cancer is stimulates actin polymerization via an inhibitory actively being pursued by a number of pharmaceutical phosphorylation of the actin severing LIM kinase (Figure 2). companies. Indeed, in many preclinical models ROCK inhibitors ROCK promotes cellular contraction and attachment via an have shown remarkable efficacy in reducing tumor growth and activating phosphorylation of myosin light chain (MLC) to metastasis. -
Myosin Motors: Novel Regulators and Therapeutic Targets in Colorectal Cancer
cancers Review Myosin Motors: Novel Regulators and Therapeutic Targets in Colorectal Cancer Nayden G. Naydenov 1, Susana Lechuga 1, Emina H. Huang 2 and Andrei I. Ivanov 1,* 1 Department of Inflammation and Immunity, Lerner Research Institute, Cleveland Clinic Foundation, Cleveland, OH 44195, USA; [email protected] (N.G.N.); [email protected] (S.L.) 2 Departments of Cancer Biology and Colorectal Surgery, Cleveland Clinic Foundation, Cleveland, OH 44195, USA; [email protected] * Correspondence: [email protected]; Tel.: +1-216-445-5620 Simple Summary: Colorectal cancer (CRC) is a deadly disease that may go undiagnosed until it presents at an advanced metastatic stage for which few interventions are available. The develop- ment and metastatic spread of CRC is driven by remodeling of the actin cytoskeleton in cancer cells. Myosins represent a large family of actin motor proteins that play key roles in regulating actin cytoskeleton architecture and dynamics. Different myosins can move and cross-link actin filaments, attach them to the membrane organelles and translocate vesicles along the actin filaments. These diverse activities determine the key roles of myosins in regulating cell proliferation, differ- entiation and motility. Either mutations or the altered expression of different myosins have been well-documented in CRC; however, the roles of these actin motors in colon cancer development remain poorly understood. The present review aims at summarizing the evidence that implicate myosin motors in regulating CRC growth and metastasis and discusses the mechanisms underlying the oncogenic and tumor-suppressing activities of myosins. Abstract: Colorectal cancer (CRC) remains the third most common cause of cancer and the second most common cause of cancer deaths worldwide. -
Supplementary Table S4. FGA Co-Expressed Gene List in LUAD
Supplementary Table S4. FGA co-expressed gene list in LUAD tumors Symbol R Locus Description FGG 0.919 4q28 fibrinogen gamma chain FGL1 0.635 8p22 fibrinogen-like 1 SLC7A2 0.536 8p22 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2 DUSP4 0.521 8p12-p11 dual specificity phosphatase 4 HAL 0.51 12q22-q24.1histidine ammonia-lyase PDE4D 0.499 5q12 phosphodiesterase 4D, cAMP-specific FURIN 0.497 15q26.1 furin (paired basic amino acid cleaving enzyme) CPS1 0.49 2q35 carbamoyl-phosphate synthase 1, mitochondrial TESC 0.478 12q24.22 tescalcin INHA 0.465 2q35 inhibin, alpha S100P 0.461 4p16 S100 calcium binding protein P VPS37A 0.447 8p22 vacuolar protein sorting 37 homolog A (S. cerevisiae) SLC16A14 0.447 2q36.3 solute carrier family 16, member 14 PPARGC1A 0.443 4p15.1 peroxisome proliferator-activated receptor gamma, coactivator 1 alpha SIK1 0.435 21q22.3 salt-inducible kinase 1 IRS2 0.434 13q34 insulin receptor substrate 2 RND1 0.433 12q12 Rho family GTPase 1 HGD 0.433 3q13.33 homogentisate 1,2-dioxygenase PTP4A1 0.432 6q12 protein tyrosine phosphatase type IVA, member 1 C8orf4 0.428 8p11.2 chromosome 8 open reading frame 4 DDC 0.427 7p12.2 dopa decarboxylase (aromatic L-amino acid decarboxylase) TACC2 0.427 10q26 transforming, acidic coiled-coil containing protein 2 MUC13 0.422 3q21.2 mucin 13, cell surface associated C5 0.412 9q33-q34 complement component 5 NR4A2 0.412 2q22-q23 nuclear receptor subfamily 4, group A, member 2 EYS 0.411 6q12 eyes shut homolog (Drosophila) GPX2 0.406 14q24.1 glutathione peroxidase -
Muscle Physiology Dr
Muscle Physiology Dr. Ebneshahidi Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Skeletal Muscle Figure 9.2 (a) Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Functions of the muscular system . 1. Locomotion . 2. Vasoconstriction and vasodilatation- constriction and dilation of blood vessel Walls are the results of smooth muscle contraction. 3. Peristalsis – wavelike motion along the digestive tract is produced by the Smooth muscle. 4. Cardiac motion . 5. Posture maintenance- contraction of skeletal muscles maintains body posture and muscle tone. 6. Heat generation – about 75% of ATP energy used in muscle contraction is released as heat. Copyright. © 2004 Pearson Education, Inc., publishing as Benjamin Cummings . Striation: only present in skeletal and cardiac muscles. Absent in smooth muscle. Nucleus: smooth and cardiac muscles are uninculcated (one nucleus per cell), skeletal muscle is multinucleated (several nuclei per cell ). Transverse tubule ( T tubule ): well developed in skeletal and cardiac muscles to transport calcium. Absent in smooth muscle. Intercalated disk: specialized intercellular junction that only occurs in cardiac muscle. Control: skeletal muscle is always under voluntary control‚ with some exceptions ( the tongue and pili arrector muscles in the dermis). smooth and cardiac muscles are under involuntary control. Copyright © 2004 Pearson Education, Inc., publishing as Benjamin Cummings Innervation: motor unit . a) a motor nerve and a myofibril from a neuromuscular junction where gap (called synapse) occurs between the two structures. at the end of motor nerve‚ neurotransmitter (i.e. acetylcholine) is stored in synaptic vesicles which will release the neurotransmitter using exocytosis upon the stimulation of a nerve impulse. Across the synapse the surface the of myofibril contains receptors that can bind with the neurotransmitter. -
Early Growth Response 1 Regulates Hematopoietic Support and Proliferation in Human Primary Bone Marrow Stromal Cells
Hematopoiesis SUPPLEMENTARY APPENDIX Early growth response 1 regulates hematopoietic support and proliferation in human primary bone marrow stromal cells Hongzhe Li, 1,2 Hooi-Ching Lim, 1,2 Dimitra Zacharaki, 1,2 Xiaojie Xian, 2,3 Keane J.G. Kenswil, 4 Sandro Bräunig, 1,2 Marc H.G.P. Raaijmakers, 4 Niels-Bjarne Woods, 2,3 Jenny Hansson, 1,2 and Stefan Scheding 1,2,5 1Division of Molecular Hematology, Department of Laboratory Medicine, Lund University, Lund, Sweden; 2Lund Stem Cell Center, Depart - ment of Laboratory Medicine, Lund University, Lund, Sweden; 3Division of Molecular Medicine and Gene Therapy, Department of Labora - tory Medicine, Lund University, Lund, Sweden; 4Department of Hematology, Erasmus MC Cancer Institute, Rotterdam, the Netherlands and 5Department of Hematology, Skåne University Hospital Lund, Skåne, Sweden ©2020 Ferrata Storti Foundation. This is an open-access paper. doi:10.3324/haematol. 2019.216648 Received: January 14, 2019. Accepted: July 19, 2019. Pre-published: August 1, 2019. Correspondence: STEFAN SCHEDING - [email protected] Li et al.: Supplemental data 1. Supplemental Materials and Methods BM-MNC isolation Bone marrow mononuclear cells (BM-MNC) from BM aspiration samples were isolated by density gradient centrifugation (LSM 1077 Lymphocyte, PAA, Pasching, Austria) either with or without prior incubation with RosetteSep Human Mesenchymal Stem Cell Enrichment Cocktail (STEMCELL Technologies, Vancouver, Canada) for lineage depletion (CD3, CD14, CD19, CD38, CD66b, glycophorin A). BM-MNCs from fetal long bones and adult hip bones were isolated as reported previously 1 by gently crushing bones (femora, tibiae, fibulae, humeri, radii and ulna) in PBS+0.5% FCS subsequent passing of the cell suspension through a 40-µm filter. -
Non-Muscle Myosin 2A (NM2A): Structure, Regulation and Function
cells Review Non-Muscle Myosin 2A (NM2A): Structure, Regulation and Function Cláudia Brito 1,2 and Sandra Sousa 1,* 1 Group of Cell Biology of Bacterial Infections, i3S-Instituto de Investigação e Inovação em Saúde, IBMC, Universidade do Porto, 4200-135 Porto, Portugal; [email protected] 2 Programa Doutoral em Biologia Molecular e Celular (MCBiology), Instituto de Ciências Biomédicas Abel Salazar, Universidade do Porto, 4099-002 Porto, Portugal * Correspondence: [email protected] Received: 19 May 2020; Accepted: 29 June 2020; Published: 1 July 2020 Abstract: Non-muscle myosin 2A (NM2A) is a motor cytoskeletal enzyme with crucial importance from the early stages of development until adulthood. Due to its capacity to convert chemical energy into force, NM2A powers the contraction of the actomyosin cytoskeleton, required for proper cell division, adhesion and migration, among other cellular functions. Although NM2A has been extensively studied, new findings revealed that a lot remains to be discovered concerning its spatiotemporal regulation in the intracellular environment. In recent years, new functions were attributed to NM2A and its activity was associated to a plethora of illnesses, including neurological disorders and infectious diseases. Here, we provide a concise overview on the current knowledge regarding the structure, the function and the regulation of NM2A. In addition, we recapitulate NM2A-associated diseases and discuss its potential as a therapeutic target. Keywords: non-muscle myosin 2A (NM2A); NM2A activity regulation; NM2A filament assembly; actomyosin cytoskeleton; cell migration; cell adhesion; plasma membrane blebbing 1. Superfamily of Myosins The cell cytoskeleton is an interconnected and dynamic network of filaments essential for intracellular organization and cell shape maintenance. -
Supplementary Information
Supplementary information (a) (b) Figure S1. Resistant (a) and sensitive (b) gene scores plotted against subsystems involved in cell regulation. The small circles represent the individual hits and the large circles represent the mean of each subsystem. Each individual score signifies the mean of 12 trials – three biological and four technical. The p-value was calculated as a two-tailed t-test and significance was determined using the Benjamini-Hochberg procedure; false discovery rate was selected to be 0.1. Plots constructed using Pathway Tools, Omics Dashboard. Figure S2. Connectivity map displaying the predicted functional associations between the silver-resistant gene hits; disconnected gene hits not shown. The thicknesses of the lines indicate the degree of confidence prediction for the given interaction, based on fusion, co-occurrence, experimental and co-expression data. Figure produced using STRING (version 10.5) and a medium confidence score (approximate probability) of 0.4. Figure S3. Connectivity map displaying the predicted functional associations between the silver-sensitive gene hits; disconnected gene hits not shown. The thicknesses of the lines indicate the degree of confidence prediction for the given interaction, based on fusion, co-occurrence, experimental and co-expression data. Figure produced using STRING (version 10.5) and a medium confidence score (approximate probability) of 0.4. Figure S4. Metabolic overview of the pathways in Escherichia coli. The pathways involved in silver-resistance are coloured according to respective normalized score. Each individual score represents the mean of 12 trials – three biological and four technical. Amino acid – upward pointing triangle, carbohydrate – square, proteins – diamond, purines – vertical ellipse, cofactor – downward pointing triangle, tRNA – tee, and other – circle. -
Supplementary Table 1
Supplementary Table 1. 492 genes are unique to 0 h post-heat timepoint. The name, p-value, fold change, location and family of each gene are indicated. Genes were filtered for an absolute value log2 ration 1.5 and a significance value of p ≤ 0.05. Symbol p-value Log Gene Name Location Family Ratio ABCA13 1.87E-02 3.292 ATP-binding cassette, sub-family unknown transporter A (ABC1), member 13 ABCB1 1.93E-02 −1.819 ATP-binding cassette, sub-family Plasma transporter B (MDR/TAP), member 1 Membrane ABCC3 2.83E-02 2.016 ATP-binding cassette, sub-family Plasma transporter C (CFTR/MRP), member 3 Membrane ABHD6 7.79E-03 −2.717 abhydrolase domain containing 6 Cytoplasm enzyme ACAT1 4.10E-02 3.009 acetyl-CoA acetyltransferase 1 Cytoplasm enzyme ACBD4 2.66E-03 1.722 acyl-CoA binding domain unknown other containing 4 ACSL5 1.86E-02 −2.876 acyl-CoA synthetase long-chain Cytoplasm enzyme family member 5 ADAM23 3.33E-02 −3.008 ADAM metallopeptidase domain Plasma peptidase 23 Membrane ADAM29 5.58E-03 3.463 ADAM metallopeptidase domain Plasma peptidase 29 Membrane ADAMTS17 2.67E-04 3.051 ADAM metallopeptidase with Extracellular other thrombospondin type 1 motif, 17 Space ADCYAP1R1 1.20E-02 1.848 adenylate cyclase activating Plasma G-protein polypeptide 1 (pituitary) receptor Membrane coupled type I receptor ADH6 (includes 4.02E-02 −1.845 alcohol dehydrogenase 6 (class Cytoplasm enzyme EG:130) V) AHSA2 1.54E-04 −1.6 AHA1, activator of heat shock unknown other 90kDa protein ATPase homolog 2 (yeast) AK5 3.32E-02 1.658 adenylate kinase 5 Cytoplasm kinase AK7 -
Ancestral Genome Reconstruction Identifies the Evolutionary Basis for Trait Acquisition in Polyphosphate Accumulating Bacteria
The ISME Journal (2016) 10, 2931–2945 OPEN © 2016 International Society for Microbial Ecology All rights reserved 1751-7362/16 www.nature.com/ismej ORIGINAL ARTICLE Ancestral genome reconstruction identifies the evolutionary basis for trait acquisition in polyphosphate accumulating bacteria Ben O Oyserman1, Francisco Moya1, Christopher E Lawson1, Antonio L Garcia1, Mark Vogt1, Mitchell Heffernen1, Daniel R Noguera1 and Katherine D McMahon1,2 1Department of Civil and Environmental Engineering, University of Wisconsin—Madison, Madison, WI, USA and 2Department of Bacteriology, University of Wisconsin—Madison, Madison, WI, USA The evolution of complex traits is hypothesized to occur incrementally. Identifying the transitions that lead to extant complex traits may provide a better understanding of the genetic nature of the observed phenotype. A keystone functional group in wastewater treatment processes are polyphosphate accumulating organisms (PAOs), however the evolution of the PAO phenotype has yet to be explicitly investigated and the specific metabolic traits that discriminate non-PAO from PAO are currently unknown. Here we perform the first comprehensive investigation on the evolution of the PAO phenotype using the model uncultured organism Candidatus Accumulibacter phosphatis (Accumu- libacter) through ancestral genome reconstruction, identification of horizontal gene transfer, and a kinetic/stoichiometric characterization of Accumulibacter Clade IIA. The analysis of Accumulibacter’s last common ancestor identified 135 laterally derived -
Effects of Acylphosphatase on the Activity of Erythrocyte Membrane Ca2+ Pump*
THEJOURNAL OF BIOLOGICALCHEMISTRY Vol. 266, No. 17, Issue of June 15, pp. 10867-10871,1991 0 1991 by The American Society for Biochemistry andMolecular Biology, Inc. Printed in U.S.A. Effects of Acylphosphataseon the Activity of Erythrocyte Membrane Ca2+ Pump* (Received for publication, September 24, 1990) Paolo NassiS, Chiara Nediani, Gianfranco Liguri,Niccolo Taddei, and GiampietroRamponi From the Dipartimento di Scienze Biochimiche, Universita di Firenze, VialeG. Morgagni 50, 50134 Florence, Italy Acylphosphatase, purifiedfrom human erythrocytes, M (1).Many studies have focused on the properties and the actively hydrolyzes the acylphosphorylated interme- action mechanism of RBC membrane Ca2+-ATPase, andac- diate of human redblood cell membrane Ca2+-ATPase. cumulated evidence indicates that ATP hydrolysis proceeds This effect occurred with acylphosphatase amounts through (up aseries of elementary reactions that involve the Ca2+- to 10 units/mg membrane protein) that fall within the dependent formation of an acylphosphorylated intermediate physiologicalrange. Furthermore, a verylow K,,, (2). On the other hand, the efficiency of the calcium pump is value, 3.41 f 1.16 (S.E.) nM, suggests a high affinity still controversial since differing Ca2’/ATP ratios have been in acylphosphatase for thephosphoenzyme intermedi- reported (3), suggesting that thestoichiometry of this process ate, whichis consistent with the small numberof Ca2+- ATPase units in human erythrocyte membrane.Acyl- maybe 1 or 2 calcium ions transported permol of ATP phosphatase addition tored cell membranes resulted in hydrolyzed. It is well known that human RBC Ca*+-ATPase a significant increase in the rate of ATP hydrolysis. is activated by calmodulin and that this effect is associated Maximal stimulation (about 2-fold over basal) wasob- with an increased rate in phosphorylated intermediate for- tained at 2 units/mg membrane protein, witha concom- mation (2).