Bioactivity of Secondary Metabolites and Thallus Extracts from Lichen Fungi
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Lichens and Associated Fungi from Glacier Bay National Park, Alaska
The Lichenologist (2020), 52,61–181 doi:10.1017/S0024282920000079 Standard Paper Lichens and associated fungi from Glacier Bay National Park, Alaska Toby Spribille1,2,3 , Alan M. Fryday4 , Sergio Pérez-Ortega5 , Måns Svensson6, Tor Tønsberg7, Stefan Ekman6 , Håkon Holien8,9, Philipp Resl10 , Kevin Schneider11, Edith Stabentheiner2, Holger Thüs12,13 , Jan Vondrák14,15 and Lewis Sharman16 1Department of Biological Sciences, CW405, University of Alberta, Edmonton, Alberta T6G 2R3, Canada; 2Department of Plant Sciences, Institute of Biology, University of Graz, NAWI Graz, Holteigasse 6, 8010 Graz, Austria; 3Division of Biological Sciences, University of Montana, 32 Campus Drive, Missoula, Montana 59812, USA; 4Herbarium, Department of Plant Biology, Michigan State University, East Lansing, Michigan 48824, USA; 5Real Jardín Botánico (CSIC), Departamento de Micología, Calle Claudio Moyano 1, E-28014 Madrid, Spain; 6Museum of Evolution, Uppsala University, Norbyvägen 16, SE-75236 Uppsala, Sweden; 7Department of Natural History, University Museum of Bergen Allégt. 41, P.O. Box 7800, N-5020 Bergen, Norway; 8Faculty of Bioscience and Aquaculture, Nord University, Box 2501, NO-7729 Steinkjer, Norway; 9NTNU University Museum, Norwegian University of Science and Technology, NO-7491 Trondheim, Norway; 10Faculty of Biology, Department I, Systematic Botany and Mycology, University of Munich (LMU), Menzinger Straße 67, 80638 München, Germany; 11Institute of Biodiversity, Animal Health and Comparative Medicine, College of Medical, Veterinary and Life Sciences, University of Glasgow, Glasgow G12 8QQ, UK; 12Botany Department, State Museum of Natural History Stuttgart, Rosenstein 1, 70191 Stuttgart, Germany; 13Natural History Museum, Cromwell Road, London SW7 5BD, UK; 14Institute of Botany of the Czech Academy of Sciences, Zámek 1, 252 43 Průhonice, Czech Republic; 15Department of Botany, Faculty of Science, University of South Bohemia, Branišovská 1760, CZ-370 05 České Budějovice, Czech Republic and 16Glacier Bay National Park & Preserve, P.O. -
Piedmont Lichen Inventory
PIEDMONT LICHEN INVENTORY: BUILDING A LICHEN BIODIVERSITY BASELINE FOR THE PIEDMONT ECOREGION OF NORTH CAROLINA, USA By Gary B. Perlmutter B.S. Zoology, Humboldt State University, Arcata, CA 1991 A Thesis Submitted to the Staff of The North Carolina Botanical Garden University of North Carolina at Chapel Hill Advisor: Dr. Johnny Randall As Partial Fulfilment of the Requirements For the Certificate in Native Plant Studies 15 May 2009 Perlmutter – Piedmont Lichen Inventory Page 2 This Final Project, whose results are reported herein with sections also published in the scientific literature, is dedicated to Daniel G. Perlmutter, who urged that I return to academia. And to Theresa, Nichole and Dakota, for putting up with my passion in lichenology, which brought them from southern California to the Traingle of North Carolina. TABLE OF CONTENTS Introduction……………………………………………………………………………………….4 Chapter I: The North Carolina Lichen Checklist…………………………………………………7 Chapter II: Herbarium Surveys and Initiation of a New Lichen Collection in the University of North Carolina Herbarium (NCU)………………………………………………………..9 Chapter III: Preparatory Field Surveys I: Battle Park and Rock Cliff Farm……………………13 Chapter IV: Preparatory Field Surveys II: State Park Forays…………………………………..17 Chapter V: Lichen Biota of Mason Farm Biological Reserve………………………………….19 Chapter VI: Additional Piedmont Lichen Surveys: Uwharrie Mountains…………………...…22 Chapter VII: A Revised Lichen Inventory of North Carolina Piedmont …..…………………...23 Acknowledgements……………………………………………………………………………..72 Appendices………………………………………………………………………………….…..73 Perlmutter – Piedmont Lichen Inventory Page 4 INTRODUCTION Lichens are composite organisms, consisting of a fungus (the mycobiont) and a photosynthesising alga and/or cyanobacterium (the photobiont), which together make a life form that is distinct from either partner in isolation (Brodo et al. -
Upland Oakwood (Uk Bap Priority Habitat)
UPLAND OAKWOOD (UK BAP PRIORITY HABITAT) Summary This is woodland on well-drained to rather poorly drained, acidic to neutral soils in the upland parts of Britain, where either pedunculate or sessile oak forms at least 30% of the canopy cover. Other tree and shrub species occur commonly, especially downy birch, silver birch, rowan, hazel and holly. Like upland birchwoods, the field layer is mostly grassy or heathy, but when very heavily grazed can be dominated by large bryophytes. Small herbs, bryophytes and ferns, including bracken, can be very common, and on rocks, banks, trees and shrubs in the west there can be a rich flora of oceanic bryophytes including some uncommon species. Most Scottish examples of this priority habitat are on moderate to steep slopes below 300 m, with well drained brown earth or podzol soils. This priority habitat can occur in mosaics with the Upland birchwoods, Upland mixed ashwoods and Wet woodland priority habitats, as well as with open habitats including bracken, heath, cliffs, screes and acid grassland. The habitat is widespread in Scotland and in upland areas of Britain generally. Good management for conservation in this habitat generally aims towards maintaining a good diversity of species, sizes and age classes of trees and shrubs, encouraging diversity in the structure and species composition of the ground vegetation, maintaining rich bryophyte and lichen assemblages on rocks and trees especially in the west, maintaining good quantities of standing and fallen dead wood, and controlling the extent and spread of non-native trees and shrubs, especially rhododendron, Rhododendron ponticum. What is it? This is woodland on well-drained to rather poorly drained, acidic to neutral soils in the upland parts of Britain, where sessile oak Quercus petraea or pedunculate oak Quercus robur forms at least 30% of the canopy cover. -
Testing Morphology-Based Delimitation of Vulpicida Juniperinus and V
The Lichenologist 44(6): 757–772 (2012) 6 British Lichen Society, 2012 doi:10.1017/S0024282912000448 Testing morphology-based delimitation of Vulpicida juniperinus and V. tubulosus (Parmeliaceae) using three molecular markers Kristiina MARK, Lauri SAAG, Andres SAAG, Arne THELL and Tiina RANDLANE Abstract: The delimitation of two morphologically similar and not easily separable Vulpicida species, V. juniperinus and V. tubulosus, is analyzed using nuclear ITS and Mcm7, and mitochondrial SSU DNA sequences. Seventy-nine Vulpicida specimens, most from the two focal taxa, are included in the three-locus gene tree. The results from Bayesian and parsimony analyses are presented. There are strong conflicts between the single locus gene trees. Vulpicida juniperinus and V. tubulosus are divided into two clearly distinguished groups in the ITS and concatenated B/MCMC tree. However, these species are mixed in both clades, appearing polyphyletic. Currently accepted V. juniperinus and V. tubulosus are not distinct according to the loci studied. Vulpicida pinastri appears monophyletic based on the available sequences. Key words: gene tree, ITS, lichenized fungi, Mcm7, molecular phylogenetics, MrBayes, mtSSU, taxonomy Accepted for publication 15 June 2012 Introduction J. Lai, V. juniperinus (L.) J.-E. Mattsson & M. J. Lai, V. pinastri (Scop.) J.-E. Mattsson, The morphological group of cetrarioid lichens V. tilesii (Ach.) J.-E. Mattsson & M. J. Lai, V. (Parmeliaceae) with erect foliose/subfruticose tubulosus (Schaer.) J.-E. Mattsson & M. J. Lai thallus, marginal apothecia and pycnidia, and and V. viridis (Schwein.) J.-E. Mattsson & production of the Cetraria-type lichenan, M. J. Lai. In 1993, the new genus Vulpicida contains nearly 150 species in over 20 genera was delimited based on morphology, anatomy, (Randlane et al. -
Notiziario Società Lichenologica Italiana 28, 65-67
Notiziario della Società Lichenologica Italiana Vol. 33 - 2020 Amiche e amici lichenologi, eccovi il 33° volume del Notiziario della Società Lichenologica, un numero anomalo per tempi e modi, in un anno anomalo. Non essendosi svolto il nostro convegno annuale sapete già che non troverete in questo volume gli Atti: a inizio volume l’attualità esterna arriva in queste pagine, in due contributi narrativi scritti durante il lockdown e, purtroppo, nel ricordo dedicato a Fausto Ceni. Riprendono le interviste, con Marco Ciardi, per il piacere di dialogare con realtà al di fuori del mondo lichenologico, a seguire un excursus nell’illustrazione lichenologica, un interessante contributo sui licheni acquatici, e un punto sulle reti di biomonitoraggio. Sul finale di volume si torna alle attività dello scorso anno, con il resoconto dell’escursione e i riassunti di alcuni dei miniseminari di avvicinamento, riuniti qui nell’auspicio che interessino nuovi aspiranti lichenologi. Buona lettura! Enrica Matteucci Not.Soc.Lich.Ital. 33: 5-8 (2020) Storia di un lichene e dell’uomo che veniva a misurarlo 1 Giorgio Brunialti In lockdown a Monterotondo Marittimo (Grosseto) Il castagneto da frutto si estendeva su un ampio versante del monte, esposto a sud. Solo a metà mattinata i raggi del sole raggiungevano le fronde e il sottobosco. Creavano fili dorati trapassando le verdi foglie nuove della primavera. Nell’atmosfera senza brezza, la luce esaltava il volo degli insetti e i granelli di polvere e pollini. Le sagome bitorzolute degli immensi castagni, dalla corteccia nodosa e umida, creavano giochi di ombre sul terreno ricco di foglie e piante e humus. -
Native Pine Woodlands (Uk Bap Priority Habitat)
NATIVE PINE WOODLANDS (UK BAP PRIORITY HABITAT) Summary This is woodland with a canopy dominated by native Scots pine Pinus sylvestris. Other trees and shrubs can occur, especially silver birch Betula pendula, downy birch Betula pubescens, rowan Sorbus aucuparia, aspen Populus tremula, grey willow Salix cinerea, eared willow Salix aurita and juniper Juniperus communis, and these tend to be more frequent in western pine woods. The ground vegetation is typically heathy, although some examples have a grassy or moss-dominated field layer. Bryophytes are generally abundant, but some examples around the Moray Firth are less mossy and have a ground layer made up of a carpet of Cladonia lichens. This priority habitat occupies well-drained to quite wet acid soils and occurs in association with other habitats including birch woodland, wet woodland, heaths both wet and dry, bogs, bracken, grasslands, cliffs and screes. It is restricted to that part of the Scottish Highlands in which Pinus sylvestris occurs as a native species. Good management for conservation in this habitat generally aims towards maintaining a good diversity of species, sizes and age classes of trees and shrubs, encouraging diversity in the structure and species composition of the ground vegetation, maintaining rich bryophyte and lichen assemblages on rocks and trees especially in the west, maintaining good quantities of standing and fallen dead wood, and controlling the extent and spread of non-native trees and shrubs, especially Rhododendron ponticum. What is it? This woodland has a canopy dominated by native Scots pine Pinus sylvestris, with other tree and shrub species often occurring. The ground vegetation reflects the acidic nature of the soils, and typically contains an abundance of ling Calluna vulgaris and/or bilberry Vaccinium myrtillus. -
Fungi and Lichens Recorded During the Cryptogam Symposium on Natural Beech Forests, Slovakia 2011
CZECH MYCOLOGY 68(1): 1–40, FEBRUARY 1, 2016 (ONLINE VERSION, ISSN 1805-1421) Fungi and lichens recorded during the Cryptogam Symposium on Natural Beech Forests, Slovakia 2011 1 2 3 4 SLAVOMÍR ADAMČÍK *, ERIK AUDE ,CLAUS BÄSSLER ,MORTEN CHRISTENSEN , 5 6 7 KLAAS VAN DORT ,ÖRJAN FRITZ ,STANISLAV GLEJDURA , 8 9 10 7 JACOB HEILMANN-CLAUSEN ,JAN HOLEC ,SOŇA JANČOVIČOVÁ ,VLADIMÍR KUNCA , 1 11 12 ANNA LACKOVIČOVÁ ,MICHAEL LÜTH ,PÉTER ÓDOR 1 Slovak Academy of Sciences, Institute of Botany, Dúbravská cesta 9, SK-845 23 Bratislava, Slovakia; [email protected] 2 Rřrvangen 2B, DK-8520 Lystrup, Denmark 3 Bavarian Forest National Park, Freyunger Str. 2, DE-94481 Grafenau, Germany 4 Grontmij, Granskoven 8, DK-2600 Glostrup, Denmark 5 Forestfun, Leeuweriksweide 186, NL-6708 Wageningen, the Netherlands 6 Lingonstigen 6, SE-296 34 Ĺhus, Sweden 7 Technical University in Zvolen, Faculty of Ecology and Environmental Sciences, T.G. Masaryka 24, SK-960 53 Zvolen, Slovakia 8 Centre for Macroecology, Evolution and Climate, Natural History Museum of Denmark, University of Copenhagen, DK-2100 Křbenhavn, Denmark 9 National Museum, Mycological Department, Cirkusová 1740, CZ-193 00 Praha 9, Czech Republic 10Comenius University in Bratislava, Faculty of Natural Sciences, Department of Botany, Révová 39, SK-811 02 Bratislava, Slovakia 11 Büro für Umweltplanung, Emmendinger Str. 32, DE-79106 Freiburg, Germany 12 MTA Centre for Ecological Research, Institute of Ecology and Botany, Alkotmány u. 2-4, HU-2163 Vácrátót, Hungary *corresponding author Adamčík S., Aude E., Bässler C., Christensen M., Dort K. van, Fritz Ö., Glejdura S., Heilmann-Clausen J., Holec J., Jančovičová S., Kunca V., Lackovičová A., Lüth M., Ódor P. -
Description of Spatial and Temporal Distributions of Epiphytic Lichens
Linköping Studies in Science and Technology Thesis No. 1348 Description of spatial and temporal distributions of epiphytic lichens by Håkan Lättman Linköping University and Södertörn University College LiU–Tek–Lic–2008:6 Front cover: Ramalina fastigiata (rosettbrosklav) photo by the author © Håkan Lättman 2008 ISBN 978–91–7393–967–6 ISSN 0280–7971 Printed by LiU-Tryck Linköping, Sweden, 2008 Avdelning, Datum Institution Date 2008–04–11 Biology, IFM Språk Rapporttyp ISBN 978–91–7393–967–6 Language Report category ____________________________________________ Svenska/Swedish X Licentiatavhandling _________ X Engelska/English Examensarbete C-uppsats ISRN D-uppsats _________________________________________________________________ _ ________________ Övrig rapport Serietitel och serienummer ISSN 0280–7971 Linköping studies in science and technology, _ ________________ LIU–TEC–LIC–2008:6 Thesis No. 1348 URL för elektronisk version ____________________________________ Titel/Title Description of spatial and temporal distributions of epiphytic lichens Författare/Author Håkan Lättman Sammanfattning/Abstract Lichens are, in most cases, sensitive to anthropogenic factors such as air pollution, global warming, forestry and fragmentation. Two studies are included in this thesis. The first is an evaluation of the importance of old oak for the rare epiphytic lichen Cliostomum corrugatum (Ach.) Fr. This study analysed whether C. corrugatum was limited by dispersal or restricted to tree stands with an unbroken continuity or the substrate old oaks. The results provide evidence that the investigated five populations in Östergötland, Sweden, of C. corrugatum exhibit substantial gene flow, an effective dispersal and a small genetic variation between the sites. Most of the genetic variation was within the populations. Thus, C. corrugatum is more dependent of the substrate old oaks, rather than limited by dispersal. -
A New Genus and Species of Foliicolous Lichen in a New Family of Strigulales
Jiang et al. IMA Fungus (2020) 11:1 https://doi.org/10.1186/s43008-019-0026-2 IMA Fungus RESEARCH Open Access A new genus and species of foliicolous lichen in a new family of Strigulales (Ascomycota: Dothideomycetes) reveals remarkable class-level homoplasy Shu Hua Jiang1, David L. Hawksworth2,3,4, Robert Lücking5 and Jiang Chun Wei1,6* Abstract Phylogenetic analysis of some foliicolous lichens collected in Hainan Province, China, revealed a new lineage morphologically similar to Porina but phylogenetically related to Strigulaceae (Dothideomycetes), differing from the latter in ascus type. The monospecific genus Tenuitholiascus gen. nov. is introduced for the single species, T. porinoides sp. nov., which is placed in the new, monogeneric family Tenuitholiascaceae, sister to Strigulaceae in Strigulales. The new taxon closely resembles the genus Porina in external morphology and ascospore type, as well as the thin-walled asci and unbranched paraphyses. Yet, it is entirely unrelated to the latter, which belongs in class Lecanoromycetes in the order Gyalectales. Keywords: Phylloblastia, Phyllocratera, Phylloporis INTRODUCTION Phyllobathelium, Phyllocratera, Strigula) were accepted in Foliicolous lichens are widespread in the tropics and the family at that time, but with the inclusion of the extraordinarily diverse (Santesson 1952; Lücking 2001, poorly known, monospecific genus Oletheriostrigula 2008). Their small size and their tendency to occur (Huhndorf and Harris 1996), that number has grown to mixed with other foliicolous lichens and non-lichenized five (Jaklitsch et al. 2016; Lücking et al. 2017). Members of fungi in minute communities, and in some cases their this lineage are mostly found on leaves, with the most spe- growth under the host plant cuticle, has rendered a re- ciose genus being Strigula, and more rarely on bark and appraisal of the relationships of these fungi by molecular rocks, mostly in tropical to subtropical habitats, with very phylogenetic methods technically difficult. -
Some Interesting Records of Lichenized and Lichenicolous Ascomycota from South America
Polish Botanical Journal 51(2): 209–215, 2006 SOME INTERESTING RECORDS OF LICHENIZED AND LICHENICOLOUS ASCOMYCOTA FROM SOUTH AMERICA ADAM FLAKUS, MARTIN KUKWA & PAWEŁ CZARNOTA Abstract. New records of six lichens and one lichenicolous fungus from South America are presented. Lecanora leuckertiana (Peru) and Psilolechia clavulifera (Bolivia) are recorded for the fi rst time from South America. Chrysothrix xanthina, Nectriopsis parmeliae (on Candelariella sp. as a new host), Psilolechia lucida and Trapeliopsis granulosa are new to Bolivia, and Piccolia ochrophora to Argentina. Chrysothrix and Psilolechia are new genera to the lichen biota of Bolivia. Key words: Argentina, biodiversity, biogeography, Bolivia, neotropics, Peru Adam Flakus, Laboratory of Lichenology, W. Szafer Institute of Botany, Polish Academy of Sciences, Lubicz 46, PL-31-512 Kraków, Poland; e-mail: ibfl [email protected] Martin Kukwa, Department of Plant Taxonomy and Nature Conservation, University of Gdańsk, Al. Legionów 9, PL-80-441 Gdańsk, Poland; e-mail: [email protected] Paweł Czarnota, Scientifi c Laboratory of the Gorce National Park, Poręba Wielka 590, PL-34-735 Niedźwiedź, Poland; e-mail: [email protected] INTRODUCTION The tropics are supposed to host the biologically specimen was borrowed from the University of Helsinki richest land ecosystems in the world. In terms of herbarium (H). Thin-layer chromatography (TLC) was lichen diversity, however, they seem to be so far used to identify secondary metabolites (Orange et al. the least-explored regions, as many new species 2001). For identifi cation of pulvinic acid derivatives, extracts from thalli of Candelariella vitellina (Hoffm.) are still being described every year (e.g., Aptroot Müll. -
A Revised Catalog of Arizona Lichens
A REVISED CATALOG OF ARIZONA LICHENS Scott T. Bates University of Colorado at Boulder Rm. 318 CIRES Bldg. Boulder, CO 80309 Anne Barber Edward Gilbert Robin T. Schroeder and Thomas H. Nash III School of Life Sciences Arizona State University P. O. Box 874601 Tempe, AZ 85282-4601 ABSTRACT This revised “catalog” of lichens includes 969 species of lichenized fungi (lichens) presented for the state of Arizona (USA), and updates the original catalog published in 1975 by Nash and Johnsen. These taxa are derived from within 5 classes and over 17 orders and 54 families (the latter two with 3 and 4 additional groups of uncertain taxonomic position, “Incertae sedis”) in the phylum Ascomycota. The total number of species reported here represents approximately 20% of all species known from the North American lichen flora. The list was compiled by extracting Arizona records from the three volume published set of the Lichen Flora of the Greater Sonoran Desert Region, a collaborative, authoritative treatment of lichen groups for this region that encompasses the entire state of Arizona. INTRODUCTION Nearly 80,000 species of fungi are known to science (Schmit and Mueller 2007). Of these, approximately 17% are lichenized, forming symbioses with green algae (Chlorophyta, Viridiplantae) or the so called blue-green algae (Cyanobacteria, Bacteria). These relationships produce symbiotic organisms commonly called lichens. The fungal partner (mycobiont) is thought to benefit by having access to photosynthates produced by the “algae” (photobiont), which, within the symbiosis, is thought to receive some form of protection (e.g., against desiccation or UV radiation); however, evidence for other interpretations (e.g., controlled parasitism) exist (see Nash 2008a). -
Phylogenetic Generic Classification of Parmelioid Lichens (Parmeliaceae, Ascomycota) Based on Molecular, Morphological and Chemical Evidence
TAXON 59 (6) • December 2010: 1735–1753 Crespo & al. • Generic classification of parmelioid liches TAXONOMY Phylogenetic generic classification of parmelioid lichens (Parmeliaceae, Ascomycota) based on molecular, morphological and chemical evidence Ana Crespo,1 Frank Kauff,2 Pradeep K. Divakar,1 Ruth del Prado,1 Sergio Pérez-Ortega,1 Guillermo Amo de Paz,1 Zuzana Ferencova,1 Oscar Blanco,3 Beatriz Roca-Valiente,1 Jano Núñez-Zapata,1 Paloma Cubas,1 Arturo Argüello,1 John A. Elix,4 Theodore L. Esslinger,5 David L. Hawksworth,1 Ana Millanes,6 M. Carmen Molina,6 Mats Wedin,7 Teuvo Ahti,8 Andre Aptroot,9 Eva Barreno,10 Frank Bungartz,11 Susana Calvelo,12 Mehmet Candan,13 Mariette Cole,14 Damien Ertz,15 Bernard Goffinet,16 Louise Lindblom,17 Robert Lücking,18 Francois Lutzoni,19 Jan-Eric Mattsson,20 María Inés Messuti,11 Jolanta Miadlikowska,19 Michele Piercey-Normore,21 Víctor J. Rico,1 Harrie J.M. Sipman,22 Imke Schmitt,23 Toby Spribille,24 Arne Thell,25 Göran Thor,26 Dalip K. Upreti27 & H. Thorsten Lumbsch18 1 Departamento de Biología Vegetal II, Facultad de Farmacia, Universidad Complutense de Madrid, Plaza de Ramón y Cajal s/n, 28040 Madrid, Spain 2 FB Biologie, Molecular Phylogenetics, 13/276, TU Kaiserslautern, Postfach 3049, 67653 Kaiserslautern, Germany 3 Unidad de Bioanálisis, Centro de Investigación y Control de calidad, Instituto Nacional del Consumo, Avda Cantabria s/n 28042 Madrid, Spain 4 Department of Chemistry, Australian National University, P.O. Box 4, Canberra, A.C.T. 0200, Australia 5 Department of Biological Sciences Dept. 2715, PO Box 6050, North Dakota State University, Fargo, North Dakota 58108-6050, U.S.A.