Myxomycete Plasmodia and Fruiting Bodies: Unusual Occurrences and User-Friendly Study Techniques Harold W
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Old Woman Creek National Estuarine Research Reserve Management Plan 2011-2016
Old Woman Creek National Estuarine Research Reserve Management Plan 2011-2016 April 1981 Revised, May 1982 2nd revision, April 1983 3rd revision, December 1999 4th revision, May 2011 Prepared for U.S. Department of Commerce Ohio Department of Natural Resources National Oceanic and Atmospheric Administration Division of Wildlife Office of Ocean and Coastal Resource Management 2045 Morse Road, Bldg. G Estuarine Reserves Division Columbus, Ohio 1305 East West Highway 43229-6693 Silver Spring, MD 20910 This management plan has been developed in accordance with NOAA regulations, including all provisions for public involvement. It is consistent with the congressional intent of Section 315 of the Coastal Zone Management Act of 1972, as amended, and the provisions of the Ohio Coastal Management Program. OWC NERR Management Plan, 2011 - 2016 Acknowledgements This management plan was prepared by the staff and Advisory Council of the Old Woman Creek National Estuarine Research Reserve (OWC NERR), in collaboration with the Ohio Department of Natural Resources-Division of Wildlife. Participants in the planning process included: Manager, Frank Lopez; Research Coordinator, Dr. David Klarer; Coastal Training Program Coordinator, Heather Elmer; Education Coordinator, Ann Keefe; Education Specialist Phoebe Van Zoest; and Office Assistant, Gloria Pasterak. Other Reserve staff including Dick Boyer and Marje Bernhardt contributed their expertise to numerous planning meetings. The Reserve is grateful for the input and recommendations provided by members of the Old Woman Creek NERR Advisory Council. The Reserve is appreciative of the review, guidance, and council of Division of Wildlife Executive Administrator Dave Scott and the mapping expertise of Keith Lott and the late Steve Barry. -
A First Contribution to the Knowledge of Mycetozoa from Aveyron (France)
Carnets natures, 2021, vol. 8 : 67-81 A First Contribution to the knowledge of Mycetozoa from Aveyron (France) Jonathan Cazabonne¹, Michel Ferrières² et Jean-Louis Menos³ Abstract A first official taxonomic checklist of myxomycetes from the French department Aveyron is presented. As the result of data collected by the Mycological and Botanical Association of Aveyron (AMBA), literature and online research, a total of 21 species representing 14 genera, 7 families and 5 orders, were recorded. The following information for each taxon was reported: Latin name, author(s), Basionym, locality (if known) and record sources. Macrophotographs of some new records are also appended. This work is a contribution to the knowledge of myxomycetes of Aveyron, which will eventually be integrated into a national checklist project of French myxomycetes. Key words: Biodiversity, inventory, taxonomy, Myxomycetes, Occitanie. Résumé Une première contribution à la connaissance des Mycetozoa de l’Aveyron (France) Une première liste officielle sur les Myxomycètes du département français de l’Aveyron est présentée. Au total, 21 espèces représentant 14 genres, 7 familles et 5 ordres, ont été listées, grâce aux données collectées par l’Association Mycologique et Botanique de l’Aveyron (AMBA) et à un travail de recherche bibliographique. Les informations suivantes pour chaque taxon ont été indiquées : nom latin, auteur(s), basionyme, localité (si connue) et les références. Des macrophotographies de quelques nouveaux taxa aveyronnais sont aussi annexées. Ce travail est une contribution à la connaissance des myxomycètes d’Aveyron, qui sera éventuellement intégré à un projet de checklist nationale des Myxomycètes de France. Mots clés : Biodiversité, inventaire, taxonomie, Myxomycètes, Occitanie. -
Sounds Synthesis with Slime Mould of Physarum Polycephalum
Miranda, Adamatzky, Jones, Journal of Bionic Engineering 8 (2011) 107–113. Sounds Synthesis with Slime Mould of Physarum Polycephalum Eduardo R. Miranda1, Andrew Adamatzky2 and Jeff Jones2 1 Interdisciplinary Centre for Computer Music Research (ICCMR), University of Plymouth, Plymouth, PL4 8AA UK; [email protected] 2 Unconventional Computing Centre, University of the West of England, Bristol, BS16 1QY UK; [email protected] Abstract Physarum polycephalum is a huge single cell with thousands of nuclei, which behaves like a giant amoeba. During its foraging behaviour this plasmodium produces electrical activity corresponding to different physiological states. We developed a method to render sounds from such electrical activity and thus represent spatio-temporal behaviour of slime mould in a form apprehended by humans. We show to control behaviour of slime mould to shape it towards reproduction of required range of sounds. 1 Introduction Our research is concerned with the application of novel computational paradigms implemented on biological substrates in the field of computer music. Computer music has evolved in tandem with the field of Computer Science. Computers have been programmed to produce sounds as early as the beginning of the 1950’s. Nowadays, the computer is ubiquitous in many aspects of music, ranging from software for musical composition and production, to systems for distribution of music on the Internet. Therefore, it is likely that future developments in fields such as Bionic Engineering will have an impact in computer music applications. Research into novel computing paradigms in looking for new algorithms and computing architectures inspired by, or physically implemented on, chemical, biological and physical substrates (Calude et al. -
Slime Moulds
Queen’s University Biological Station Species List: Slime Molds The current list has been compiled by Richard Aaron, a naturalist and educator from Toronto, who has been running the Fabulous Fall Fungi workshop at QUBS between 2009 and 2019. Dr. Ivy Schoepf, QUBS Research Coordinator, edited the list in 2020 to include full taxonomy and information regarding species’ status using resources from The Natural Heritage Information Centre (April 2018) and The IUCN Red List of Threatened Species (February 2018); iNaturalist and GBIF. Contact Ivy to report any errors, omissions and/or new sightings. Based on the aforementioned criteria we can expect to find a total of 33 species of slime molds (kingdom: Protozoa, phylum: Mycetozoa) present at QUBS. Species are Figure 1. One of the most commonly encountered reported using their full taxonomy; common slime mold at QUBS is the Dog Vomit Slime Mold (Fuligo septica). Slime molds are unique in the way name and status, based on whether the species is that they do not have cell walls. Unlike fungi, they of global or provincial concern (see Table 1 for also phagocytose their food before they digest it. details). All species are considered QUBS Photo courtesy of Mark Conboy. residents unless otherwise stated. Table 1. Status classification reported for the amphibians of QUBS. Global status based on IUCN Red List of Threatened Species rankings. Provincial status based on Ontario Natural Heritage Information Centre SRank. Global Status Provincial Status Extinct (EX) Presumed Extirpated (SX) Extinct in the -
Biodiversity of Plasmodial Slime Moulds (Myxogastria): Measurement and Interpretation
Protistology 1 (4), 161–178 (2000) Protistology August, 2000 Biodiversity of plasmodial slime moulds (Myxogastria): measurement and interpretation Yuri K. Novozhilova, Martin Schnittlerb, InnaV. Zemlianskaiac and Konstantin A. Fefelovd a V.L.Komarov Botanical Institute of the Russian Academy of Sciences, St. Petersburg, Russia, b Fairmont State College, Fairmont, West Virginia, U.S.A., c Volgograd Medical Academy, Department of Pharmacology and Botany, Volgograd, Russia, d Ural State University, Department of Botany, Yekaterinburg, Russia Summary For myxomycetes the understanding of their diversity and of their ecological function remains underdeveloped. Various problems in recording myxomycetes and analysis of their diversity are discussed by the examples taken from tundra, boreal, and arid areas of Russia and Kazakhstan. Recent advances in inventory of some regions of these areas are summarised. A rapid technique of moist chamber cultures can be used to obtain quantitative estimates of myxomycete species diversity and species abundance. Substrate sampling and species isolation by the moist chamber technique are indispensable for myxomycete inventory, measurement of species richness, and species abundance. General principles for the analysis of myxomycete diversity are discussed. Key words: slime moulds, Mycetozoa, Myxomycetes, biodiversity, ecology, distribu- tion, habitats Introduction decay (Madelin, 1984). The life cycle of myxomycetes includes two trophic stages: uninucleate myxoflagellates General patterns of community structure of terrestrial or amoebae, and a multi-nucleate plasmodium (Fig. 1). macro-organisms (plants, animals, and macrofungi) are The entire plasmodium turns almost all into fruit bodies, well known. Some mathematics methods are used for their called sporocarps (sporangia, aethalia, pseudoaethalia, or studying, from which the most popular are the quantita- plasmodiocarps). -
Culturing Slime Mold
Culturing Slime Mold Live Material Care Guide SCIENTIFIC BIO Background FAX! Plasmodial slime mold (phylum Myxomycota) lives in dark, moist environments such as under the bark of decaying logs, among mulch, or beneath decaying leaves. Slime mold classification is once again changing. They were in Protista due to their amoeboid-like properties. In the past, slime molds were considered a fungus because they produce fruiting bodies and spores used for reproduction. Slime molds are a group notable for its unwillingness to be neatly classified! Frequently bright in color and large in size (up to 30 cm in diameter), plasmodial slime molds consist of many amoeba-like cells, which form a mass of protoplasm called myxomycota. The organisms are capable of very slow, creeping movement by means of cytoplasmic streaming. During the reproductive stage, called pseudoplasmodium, slime molds tend to migrate to a well-lit area, such as the top of a log, where less moisture is present. They form into a slug-like mass and produce reproductive fruiting bodies, which contain spores. Under adverse conditions (lack of food, water, light, warmth, or pH changes), the organism dries out and forms a hardened mass called a sclerotium. These sclerotia may also grow fruiting bodies, but do not release spores into the environ- ment until conditions once again become favorable for growth. Spores are transported by wind, which results in the spreading of slime molds to new areas. Sclerotium (unfavorable conditions) Pseudoplasmodium (favorable conditions) Aggregate (plasmodial stage) Amoeba/spores Reproductive Fruiting Bodies Figure 1. Life Cycle of Slime Mold Culturing/Media Slime mold is typically cultured from sclerotia rather than from spores. -
Physarum Polycephalum - Large Stages by Aggregation of Many Small Amoeboid Cells
Overview Life cycle Physarum polycephalum is the most well- The life cycle of Physarum can be roughly di- known and in the laboratories of cell biologists vided into three phases: plasmodium, fruiting most cultivated representative of the slime body and spores. The large, network-shaped molds (myxomycetes), of which there are plasmodia contain numerous nuclei with a about 900 species. Slime molds combine char- double (= diploid) set of chromosomes, which acteristics of fungi (the formation of fruiting divide synchronously when the cell grows. For bodies) and animals (possession of motile sex growth, the plasmodia need to take up food cells), but are not directly related to either of such as protists, bacteria, fungi, lichens, plant them. Instead, they systematically belong to and animal remains. In the laboratory, the plas- the Amoebozoa, which usually contain tiny, modia can be easily fed with oatmeal. single-celled amoebae. The macroscopically visible life form of Physarum represents a gi- gantic amoeba, i.e. a single cell. This life form, known as plasmodium, contains a large num- ber of nuclei and forms a network of veins Fig. 1: Part of the yellow plasmodium of Physarum (Figs. 1-3). With the help of fluid cell plasma polycephalum with system of veins and migration flowing rhythmically in the veins, the plasmo- front. dium slowly moves. In contrast to this one gi- ant cell, other slime molds such as Dictyoste- lium discoideum (Protist of the Year 2011) form Physarum polycephalum - large stages by aggregation of many small amoeboid cells. The slime mold Fig. 3: Two approximately palm-sized slime molds in their natural habitat, here on the rotting branch of a fallen tree in Grunewald, Berlin. -
Slime Molds: Biology and Diversity
Glime, J. M. 2019. Slime Molds: Biology and Diversity. Chapt. 3-1. In: Glime, J. M. Bryophyte Ecology. Volume 2. Bryological 3-1-1 Interaction. Ebook sponsored by Michigan Technological University and the International Association of Bryologists. Last updated 18 July 2020 and available at <https://digitalcommons.mtu.edu/bryophyte-ecology/>. CHAPTER 3-1 SLIME MOLDS: BIOLOGY AND DIVERSITY TABLE OF CONTENTS What are Slime Molds? ....................................................................................................................................... 3-1-2 Identification Difficulties ...................................................................................................................................... 3-1- Reproduction and Colonization ........................................................................................................................... 3-1-5 General Life Cycle ....................................................................................................................................... 3-1-6 Seasonal Changes ......................................................................................................................................... 3-1-7 Environmental Stimuli ............................................................................................................................... 3-1-13 Light .................................................................................................................................................... 3-1-13 pH and Volatile Substances -
Southeast Asian Myxomycetes. I. Thailand and Burma' DON R
Southeast Asian Myxomycetes. I. Thailand and Burma' DON R. REYNOLDS2 and CONSTANTINE J. ALEXOPOULOS2 TROPICAL SOUTHEAST ASIA includes the Phillip Overeem, 1922 ; Penzig, 1898; Raciborski, 1884; pines, the Indo-Malay Archipelago and Penin Zollinger, 1844). Chip (1921) and Sanderson sula, Eastern Indochina, and parts of Thailand (1922) published from Singapore and the lower and Burma (Richards, 1952). Europeans initi Malay Peninsula." Other collections were studied ated the modern phase of botanical exploration abroad (Emoto, 1931 b; Lister, 1931; Saccardo in this region. The floristics were done either and Paoletti, 1888). In the Philippines, though locally by resident foreign botanists or by spe some mycological work has been done, most of cialists in their native country, working with the plant taxonomists who have worked there contributed materials. That which the early resi have known little about the fungi. The Myxo dents could not competently identify was sent mycetes of Indochina are completely unknown largely to European and American specialists. in the literature. The specimens, of necessity, had to be dried or The present collections are being treated in otherwise preserved for a long sea journey. As a two parts. This paper deals with the material consequence many prominent mycologists pub from Thailand and Burma; the second part con lished on material they knew only from her cerns collections from the Philippines and will barium specimens. In spite of the disadvantages be submitted for publication to the Philippine of possible misinterpretation and duplication of Agriculturist. work, it is fortunate that this procedure became Heim (1962) refers briefly to an abundance prevalent; the duplicates now in the herbaria of of Myxomycetes in Thailand. -
Myxomycetes) to Create a Global Web-Based Herbarium
Proposal for the GBIF DIGIT Programme 2004 Linking local databases for collections of plasmodial slime moulds (Myxomycetes) to create a global web-based herbarium Principal Investigator / Managing Institution Dr. Martin Schnittler, Botanical Institute and Botanical Garden, Ernst-Moritz-Arndt University Greifswald, Grimmer Str. 88, D-17487 Greifswald, Germany (in cooperation with M) Tel.: +49-3834-864123, Fax: +49-3834-864114, e-mail: [email protected] Partner Institutions Belgium: Herbarium BR Dr. J. Rammeloo, Director, research; A. Bogaerts, curator, National Botanic Garden of Belgium, Domein van Bouchout, 1860 Meise J. Rammeloo: Tel.: +32-2260-0928, Fax: +32-2260-0945, e-mail: [email protected] A. Bogaerts: Tel.: +32-2260-0935, Fax: +32-2260-0945, e-mail: [email protected] Germany: Herbarium M Dr. D. Triebel, curator, in cooperation with M. Schnittler, research, Botanical State Collection Munich, Menzinger Str. 67, D-80638 Munich, Tel. +49-089-17861-252, Fax +49-089-17861-193, e-mail: [email protected] Russia: Herbarium LE Dr. Y.K. Novozhilov, research/curator, V.L. Komarov Institute of Botany, Russian Academy of Sciences, Laboratory for Systematics and Geography of Fungi, Prof. Popov Street, 2, 197376 St. Petersburg Tel.: +07-812-234-8472, Fax: +07-812-234-4512, e-mail: [email protected] Spain: Herbarium MA Dr. C. Lado, research, M. Dueñas, curator, Real Jardin Botanico, Plaza de Murillo 2, 28014 Madrid Tel.: +34-91-420-3017, Fax: +34-91-420-0157, e-mail: [email protected] U.S.A.: Herbarium UARK (in cooperation with D. Farr, USDA National Agriculture Laboratories, National Fungus Collections BPI, Beltsville, MA) Dr. -
Physarum Polycephalum) by SPME
Analysis of the volatiles in the headspace above the plasmodium and sporangia of the slime mould (Physarum polycephalum) by SPME- GCMS Huda al Kateb1 and Ben de Lacy Costello1 1Institute for biosensing technology, University of the West of England, Bristol, BS161QY, UK E-mail: [email protected] Abstract Solid phase micro-extraction (SPME) coupled with Gas Chromatography Mass Spectrometry (GC-MS) was used to extract and analyse the volatiles in the headspace above the plasmodial and sporulating stages of the slime mould Physarum Polycephalum. In total 115 compounds were identified from across a broad range of chemical classes. Although more (87) volatile organic compounds (VOCs) were identified when using a higher incubation temperature of 75oC, a large number of compounds (79) were still identified at the lower extraction temperature of 30oC and where the plasmodial stage was living. Far fewer compounds were extracted after sporulation at the two extraction temperatures. There were some marked differences between the VOCs identified in the plasmodial stage and after sporulation. In particular the nitrogen containing compounds acetonitrile, pyrrole, 2, 5-dimethyl-pyrazine and trimethyl pyrazine seemed to be associated with the sporulating stage. There were many compounds associated predominantly with the plasmodial stage including a number of furans and alkanes. Interestingly, a number of known fungal metabolites were identified including 1-octen-3- ol, 3-octanone, 1-octen-3-one, 3-octanol. In addition known metabolites of cyanobacteria and actinobacteria in particular geosmin was identified in the headspace. Volatile metabolites that had previously been identified as having a positive chemotactic response to the plasmodial stage of P. -
Myxomyceten Aus Der Bundesrepublik Deutschland V (Mit Berücksichtigung Von Vorkommen in Oberösterreich) 25-46 ©Staatl
ZOBODAT - www.zobodat.at Zoologisch-Botanische Datenbank/Zoological-Botanical Database Digitale Literatur/Digital Literature Zeitschrift/Journal: Carolinea - Beiträge zur naturkundlichen Forschung in Südwestdeutschland Jahr/Year: 1989 Band/Volume: 47 Autor(en)/Author(s): Neubert Hermann, Nowotny Wolfgang, Baumann Karlheinz Artikel/Article: Myxomyceten aus der Bundesrepublik Deutschland V (Mit Berücksichtigung von Vorkommen in Oberösterreich) 25-46 ©Staatl. Mus. f. Naturkde Karlsruhe & Naturwiss. Ver. Karlsruhe e.V.; download unter www.zobodat.at carolinea, 47: 25-46, 6 Abb., 8 Farbtaf.; Karlsruhe, 30. 10. 1989 25 H e r m a n n N e u b e r t , W o l f g a n g N o w o t n y & K a r l h e in z B a u m a n n Myxomyceten aus der Bundesrepublik Deutschland V (Mit Berücksichtigung von Vorkommen in Oberösterreich) Kurzfassung 1. Einleitung Die einzige Ordnung Stemonitales der Unterklasse Stemonito- mycetidae wird bis zu den Gattungen, die Gattungen Collaria Um dem Fehlen neuerer deutschsprachiger Bestim und Lamproderma werden bis zu den Arten aufgeschlüsselt. mungsliteratur über Myxomyceten weiter abzuhelfen Die aus der Bundesrepublik Deutschland, dem deutschen und französischen Alpenraum und Oberösterreich nachgewiesenen und als Teilergebnis einer umfangreicheren Arbeit über Arten der Gattungen Collaria und Lamproderma werden be die bei uns vorkommenden Sippen, wird nachstehend schrieben und diskutiert. 3 neue Arten und eine neue Varietät die Unterklasse Stemonitomycetidae bis zu den Gattun aus der Gattung Lamproderma werden vorgestellt: L. album, L gen aufgeschlüsselt. Hieraus werden die Arten der Gat longifilum, L. mucronatum und L. arcyrioides var. leucofilum. tungen Collaria und Lamproderma, soweit sie nachge Arcyria helvética erhält Artrang.