On the Diagonal Scaling of Euclidean Distance Matrices to Doubly Stochastic Matrices Charles R
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Eigenvalues of Euclidean Distance Matrices and Rs-Majorization on R2
Archive of SID 46th Annual Iranian Mathematics Conference 25-28 August 2015 Yazd University 2 Talk Eigenvalues of Euclidean distance matrices and rs-majorization on R pp.: 1{4 Eigenvalues of Euclidean Distance Matrices and rs-majorization on R2 Asma Ilkhanizadeh Manesh∗ Department of Pure Mathematics, Vali-e-Asr University of Rafsanjan Alemeh Sheikh Hoseini Department of Pure Mathematics, Shahid Bahonar University of Kerman Abstract Let D1 and D2 be two Euclidean distance matrices (EDMs) with correspond- ing positive semidefinite matrices B1 and B2 respectively. Suppose that λ(A) = ((λ(A)) )n is the vector of eigenvalues of a matrix A such that (λ(A)) ... i i=1 1 ≥ ≥ (λ(A))n. In this paper, the relation between the eigenvalues of EDMs and those of the 2 corresponding positive semidefinite matrices respect to rs, on R will be investigated. ≺ Keywords: Euclidean distance matrices, Rs-majorization. Mathematics Subject Classification [2010]: 34B15, 76A10 1 Introduction An n n nonnegative and symmetric matrix D = (d2 ) with zero diagonal elements is × ij called a predistance matrix. A predistance matrix D is called Euclidean or a Euclidean distance matrix (EDM) if there exist a positive integer r and a set of n points p1, . , pn r 2 2 { } such that p1, . , pn R and d = pi pj (i, j = 1, . , n), where . denotes the ∈ ij k − k k k usual Euclidean norm. The smallest value of r that satisfies the above condition is called the embedding dimension. As is well known, a predistance matrix D is Euclidean if and 1 1 t only if the matrix B = − P DP with P = I ee , where I is the n n identity matrix, 2 n − n n × and e is the vector of all ones, is positive semidefinite matrix. -
Diagonalizing a Matrix
Diagonalizing a Matrix Definition 1. We say that two square matrices A and B are similar provided there exists an invertible matrix P so that . 2. We say a matrix A is diagonalizable if it is similar to a diagonal matrix. Example 1. The matrices and are similar matrices since . We conclude that is diagonalizable. 2. The matrices and are similar matrices since . After we have developed some additional theory, we will be able to conclude that the matrices and are not diagonalizable. Theorem Suppose A, B and C are square matrices. (1) A is similar to A. (2) If A is similar to B, then B is similar to A. (3) If A is similar to B and if B is similar to C, then A is similar to C. Proof of (3) Since A is similar to B, there exists an invertible matrix P so that . Also, since B is similar to C, there exists an invertible matrix R so that . Now, and so A is similar to C. Thus, “A is similar to B” is an equivalence relation. Theorem If A is similar to B, then A and B have the same eigenvalues. Proof Since A is similar to B, there exists an invertible matrix P so that . Now, Since A and B have the same characteristic equation, they have the same eigenvalues. > Example Find the eigenvalues for . Solution Since is similar to the diagonal matrix , they have the same eigenvalues. Because the eigenvalues of an upper (or lower) triangular matrix are the entries on the main diagonal, we see that the eigenvalues for , and, hence, are . -
Clustering by Left-Stochastic Matrix Factorization
Clustering by Left-Stochastic Matrix Factorization Raman Arora [email protected] Maya R. Gupta [email protected] Amol Kapila [email protected] Maryam Fazel [email protected] University of Washington, Seattle, WA 98103, USA Abstract 1.1. Related Work in Matrix Factorization Some clustering objective functions can be written as We propose clustering samples given their matrix factorization objectives. Let n feature vectors d×n pairwise similarities by factorizing the sim- be gathered into a feature-vector matrix X 2 R . T d×k ilarity matrix into the product of a clus- Consider the model X ≈ FG , where F 2 R can ter probability matrix and its transpose. be interpreted as a matrix with k cluster prototypes n×k We propose a rotation-based algorithm to as its columns, and G 2 R is all zeros except for compute this left-stochastic decomposition one (appropriately scaled) positive entry per row that (LSD). Theoretical results link the LSD clus- indicates the nearest cluster prototype. The k-means tering method to a soft kernel k-means clus- clustering objective follows this model with squared tering, give conditions for when the factor- error, and can be expressed as (Ding et al., 2005): ization and clustering are unique, and pro- T 2 arg min kX − FG kF ; (1) vide error bounds. Experimental results on F;GT G=I simulated and real similarity datasets show G≥0 that the proposed method reliably provides accurate clusterings. where k · kF is the Frobenius norm, and inequality G ≥ 0 is component-wise. This follows because the combined constraints G ≥ 0 and GT G = I force each row of G to have only one positive element. -
Polynomial Approximation Algorithms for Belief Matrix Maintenance in Identity Management
Polynomial Approximation Algorithms for Belief Matrix Maintenance in Identity Management Hamsa Balakrishnan, Inseok Hwang, Claire J. Tomlin Dept. of Aeronautics and Astronautics, Stanford University, CA 94305 hamsa,ishwang,[email protected] Abstract— Updating probabilistic belief matrices as new might be constrained to some prespecified (but not doubly- observations arrive, in the presence of noise, is a critical part stochastic) row and column sums. This paper addresses the of many algorithms for target tracking in sensor networks. problem of updating belief matrices by scaling in the face These updates have to be carried out while preserving sum constraints, arising for example, from probabilities. This paper of uncertainty in the system and the observations. addresses the problem of updating belief matrices to satisfy For example, consider the case of the belief matrix for a sum constraints using scaling algorithms. We show that the system with three objects (labelled 1, 2 and 3). Suppose convergence behavior of the Sinkhorn scaling process, used that, at some instant, we are unsure about their identities for scaling belief matrices, can vary dramatically depending (tagged X, Y and Z) completely, and our belief matrix is on whether the prior unscaled matrix is exactly scalable or only almost scalable. We give an efficient polynomial-time algo- a 3 × 3 matrix with every element equal to 1/3. Let us rithm based on the maximum-flow algorithm that determines suppose the we receive additional information that object whether a given matrix is exactly scalable, thus determining 3 is definitely Z. Then our prior, but constraint violating the convergence properties of the Sinkhorn scaling process. -
Arxiv:1306.4805V3 [Math.OC] 6 Feb 2015 Used Greedy Techniques to Reorder Matrices
CONVEX RELAXATIONS FOR PERMUTATION PROBLEMS FAJWEL FOGEL, RODOLPHE JENATTON, FRANCIS BACH, AND ALEXANDRE D’ASPREMONT ABSTRACT. Seriation seeks to reconstruct a linear order between variables using unsorted, pairwise similarity information. It has direct applications in archeology and shotgun gene sequencing for example. We write seri- ation as an optimization problem by proving the equivalence between the seriation and combinatorial 2-SUM problems on similarity matrices (2-SUM is a quadratic minimization problem over permutations). The seriation problem can be solved exactly by a spectral algorithm in the noiseless case and we derive several convex relax- ations for 2-SUM to improve the robustness of seriation solutions in noisy settings. These convex relaxations also allow us to impose structural constraints on the solution, hence solve semi-supervised seriation problems. We derive new approximation bounds for some of these relaxations and present numerical experiments on archeological data, Markov chains and DNA assembly from shotgun gene sequencing data. 1. INTRODUCTION We study optimization problems written over the set of permutations. While the relaxation techniques discussed in what follows are applicable to a much more general setting, most of the paper is centered on the seriation problem: we are given a similarity matrix between a set of n variables and assume that the variables can be ordered along a chain, where the similarity between variables decreases with their distance within this chain. The seriation problem seeks to reconstruct this linear ordering based on unsorted, possibly noisy, pairwise similarity information. This problem has its roots in archeology [Robinson, 1951] and also has direct applications in e.g. -
Similarity-Based Clustering by Left-Stochastic Matrix Factorization
JournalofMachineLearningResearch14(2013)1715-1746 Submitted 1/12; Revised 11/12; Published 7/13 Similarity-based Clustering by Left-Stochastic Matrix Factorization Raman Arora [email protected] Toyota Technological Institute 6045 S. Kenwood Ave Chicago, IL 60637, USA Maya R. Gupta [email protected] Google 1225 Charleston Rd Mountain View, CA 94301, USA Amol Kapila [email protected] Maryam Fazel [email protected] Department of Electrical Engineering University of Washington Seattle, WA 98195, USA Editor: Inderjit Dhillon Abstract For similarity-based clustering, we propose modeling the entries of a given similarity matrix as the inner products of the unknown cluster probabilities. To estimate the cluster probabilities from the given similarity matrix, we introduce a left-stochastic non-negative matrix factorization problem. A rotation-based algorithm is proposed for the matrix factorization. Conditions for unique matrix factorizations and clusterings are given, and an error bound is provided. The algorithm is partic- ularly efficient for the case of two clusters, which motivates a hierarchical variant for cases where the number of desired clusters is large. Experiments show that the proposed left-stochastic decom- position clustering model produces relatively high within-cluster similarity on most data sets and can match given class labels, and that the efficient hierarchical variant performs surprisingly well. Keywords: clustering, non-negative matrix factorization, rotation, indefinite kernel, similarity, completely positive 1. Introduction Clustering is important in a broad range of applications, from segmenting customers for more ef- fective advertising, to building codebooks for data compression. Many clustering methods can be interpreted in terms of a matrix factorization problem. -
Doubly Stochastic Matrices Whose Powers Eventually Stop
View metadata, citation and similar papers at core.ac.uk brought to you by CORE provided by Elsevier - Publisher Connector Linear Algebra and its Applications 330 (2001) 25–30 www.elsevier.com/locate/laa Doubly stochastic matrices whose powers eventually stopୋ Suk-Geun Hwang a,∗, Sung-Soo Pyo b aDepartment of Mathematics Education, Kyungpook National University, Taegu 702-701, South Korea bCombinatorial and Computational Mathematics Center, Pohang University of Science and Technology, Pohang, South Korea Received 22 June 2000; accepted 14 November 2000 Submitted by R.A. Brualdi Abstract In this note we characterize doubly stochastic matrices A whose powers A, A2,A3,... + eventually stop, i.e., Ap = Ap 1 =···for some positive integer p. The characterization en- ables us to determine the set of all such matrices. © 2001 Elsevier Science Inc. All rights reserved. AMS classification: 15A51 Keywords: Doubly stochastic matrix; J-potent 1. Introduction Let R denote the real field. For positive integers m, n,letRm×n denote the set of all m × n matrices with real entries. As usual let Rn denote the set Rn×1.We call the members of Rn the n-vectors. The n-vector of 1’s is denoted by e,andthe identity matrix of order n is denoted by In. For two matrices A, B of the same size, let A B denote that all the entries of A − B are nonnegative. A matrix A is called nonnegative if A O. A nonnegative square matrix is called a doubly stochastic matrix if all of its row sums and column sums equal 1. -
On the Eigenvalues of Euclidean Distance Matrices
“main” — 2008/10/13 — 23:12 — page 237 — #1 Volume 27, N. 3, pp. 237–250, 2008 Copyright © 2008 SBMAC ISSN 0101-8205 www.scielo.br/cam On the eigenvalues of Euclidean distance matrices A.Y. ALFAKIH∗ Department of Mathematics and Statistics University of Windsor, Windsor, Ontario N9B 3P4, Canada E-mail: [email protected] Abstract. In this paper, the notion of equitable partitions (EP) is used to study the eigenvalues of Euclidean distance matrices (EDMs). In particular, EP is used to obtain the characteristic poly- nomials of regular EDMs and non-spherical centrally symmetric EDMs. The paper also presents methods for constructing cospectral EDMs and EDMs with exactly three distinct eigenvalues. Mathematical subject classification: 51K05, 15A18, 05C50. Key words: Euclidean distance matrices, eigenvalues, equitable partitions, characteristic poly- nomial. 1 Introduction ( ) An n ×n nonzero matrix D = di j is called a Euclidean distance matrix (EDM) 1, 2,..., n r if there exist points p p p in some Euclidean space < such that i j 2 , ,..., , di j = ||p − p || for all i j = 1 n where || || denotes the Euclidean norm. i , ,..., Let p , i ∈ N = {1 2 n}, be the set of points that generate an EDM π π ( , ,..., ) D. An m-partition of D is an ordered sequence = N1 N2 Nm of ,..., nonempty disjoint subsets of N whose union is N. The subsets N1 Nm are called the cells of the partition. The n-partition of D where each cell consists #760/08. Received: 07/IV/08. Accepted: 17/VI/08. ∗Research supported by the Natural Sciences and Engineering Research Council of Canada and MITACS. -
Smith Normal Formal of Distance Matrix of Block Graphs∗†
Ann. of Appl. Math. 32:1(2016); 20-29 SMITH NORMAL FORMAL OF DISTANCE MATRIX OF BLOCK GRAPHS∗y Jing Chen1;2,z Yaoping Hou2 (1. The Center of Discrete Math., Fuzhou University, Fujian 350003, PR China; 2. School of Math., Hunan First Normal University, Hunan 410205, PR China) Abstract A connected graph, whose blocks are all cliques (of possibly varying sizes), is called a block graph. Let D(G) be its distance matrix. In this note, we prove that the Smith normal form of D(G) is independent of the interconnection way of blocks and give an explicit expression for the Smith normal form in the case that all cliques have the same size, which generalize the results on determinants. Keywords block graph; distance matrix; Smith normal form 2000 Mathematics Subject Classification 05C50 1 Introduction Let G be a connected graph (or strong connected digraph) with vertex set f1; 2; ··· ; ng. The distance matrix D(G) is an n × n matrix in which di;j = d(i; j) denotes the distance from vertex i to vertex j: Like the adjacency matrix and Lapla- cian matrix of a graph, D(G) is also an integer matrix and there are many results on distance matrices and their applications. For distance matrices, Graham and Pollack [10] proved a remarkable result that gives a formula of the determinant of the distance matrix of a tree depend- ing only on the number n of vertices of the tree. The determinant is given by det D = (−1)n−1(n − 1)2n−2: This result has attracted much interest in algebraic graph theory. -
Alternating Sign Matrices and Polynomiography
Alternating Sign Matrices and Polynomiography Bahman Kalantari Department of Computer Science Rutgers University, USA [email protected] Submitted: Apr 10, 2011; Accepted: Oct 15, 2011; Published: Oct 31, 2011 Mathematics Subject Classifications: 00A66, 15B35, 15B51, 30C15 Dedicated to Doron Zeilberger on the occasion of his sixtieth birthday Abstract To each permutation matrix we associate a complex permutation polynomial with roots at lattice points corresponding to the position of the ones. More generally, to an alternating sign matrix (ASM) we associate a complex alternating sign polynomial. On the one hand visualization of these polynomials through polynomiography, in a combinatorial fashion, provides for a rich source of algo- rithmic art-making, interdisciplinary teaching, and even leads to games. On the other hand, this combines a variety of concepts such as symmetry, counting and combinatorics, iteration functions and dynamical systems, giving rise to a source of research topics. More generally, we assign classes of polynomials to matrices in the Birkhoff and ASM polytopes. From the characterization of vertices of these polytopes, and by proving a symmetry-preserving property, we argue that polynomiography of ASMs form building blocks for approximate polynomiography for polynomials corresponding to any given member of these polytopes. To this end we offer an algorithm to express any member of the ASM polytope as a convex of combination of ASMs. In particular, we can give exact or approximate polynomiography for any Latin Square or Sudoku solution. We exhibit some images. Keywords: Alternating Sign Matrices, Polynomial Roots, Newton’s Method, Voronoi Diagram, Doubly Stochastic Matrices, Latin Squares, Linear Programming, Polynomiography 1 Introduction Polynomials are undoubtedly one of the most significant objects in all of mathematics and the sciences, particularly in combinatorics. -
3.3 Diagonalization
3.3 Diagonalization −4 1 1 1 Let A = 0 1. Then 0 1 and 0 1 are eigenvectors of A, with corresponding @ 4 −4 A @ 2 A @ −2 A eigenvalues −2 and −6 respectively (check). This means −4 1 1 1 −4 1 1 1 0 1 0 1 = −2 0 1 ; 0 1 0 1 = −6 0 1 : @ 4 −4 A @ 2 A @ 2 A @ 4 −4 A @ −2 A @ −2 A Thus −4 1 1 1 1 1 −2 −6 0 1 0 1 = 0−2 0 1 − 6 0 11 = 0 1 @ 4 −4 A @ 2 −2 A @ @ −2 A @ −2 AA @ −4 12 A We have −4 1 1 1 1 1 −2 0 0 1 0 1 = 0 1 0 1 @ 4 −4 A @ 2 −2 A @ 2 −2 A @ 0 −6 A 1 1 (Think about this). Thus AE = ED where E = 0 1 has the eigenvectors of A as @ 2 −2 A −2 0 columns and D = 0 1 is the diagonal matrix having the eigenvalues of A on the @ 0 −6 A main diagonal, in the order in which their corresponding eigenvectors appear as columns of E. Definition 3.3.1 A n × n matrix is A diagonal if all of its non-zero entries are located on its main diagonal, i.e. if Aij = 0 whenever i =6 j. Diagonal matrices are particularly easy to handle computationally. If A and B are diagonal n × n matrices then the product AB is obtained from A and B by simply multiplying entries in corresponding positions along the diagonal, and AB = BA. -
Representations of Stochastic Matrices
Rotational (and Other) Representations of Stochastic Matrices Steve Alpern1 and V. S. Prasad2 1Department of Mathematics, London School of Economics, London WC2A 2AE, United Kingdom. email: [email protected] 2Department of Mathematics, University of Massachusetts Lowell, Lowell, MA. email: [email protected] May 27, 2005 Abstract Joel E. Cohen (1981) conjectured that any stochastic matrix P = pi;j could be represented by some circle rotation f in the following sense: Forf someg par- tition Si of the circle into sets consisting of …nite unions of arcs, we have (*) f g pi;j = (f (Si) Sj) = (Si), where denotes arc length. In this paper we show how cycle decomposition\ techniques originally used (Alpern, 1983) to establish Cohen’sconjecture can be extended to give a short simple proof of the Coding Theorem, that any mixing (that is, P N > 0 for some N) stochastic matrix P can be represented (in the sense of * but with Si merely measurable) by any aperiodic measure preserving bijection (automorphism) of a Lesbesgue proba- bility space. Representations by pointwise and setwise periodic automorphisms are also established. While this paper is largely expository, all the proofs, and some of the results, are new. Keywords: rotational representation, stochastic matrix, cycle decomposition MSC 2000 subject classi…cations. Primary: 60J10. Secondary: 15A51 1 Introduction An automorphism of a Lebesgue probability space (X; ; ) is a bimeasurable n bijection f : X X which preserves the measure : If S = Si is a non- ! f gi=1 trivial (all (Si) > 0) measurable partition of X; we can generate a stochastic n matrix P = pi;j by the de…nition f gi;j=1 (f (Si) Sj) pi;j = \ ; i; j = 1; : : : ; n: (1) (Si) Since the partition S is non-trivial, the matrix P has a positive invariant (stationary) distribution v = (v1; : : : ; vn) = ( (S1) ; : : : ; (Sn)) ; and hence (by de…nition) is recurrent.